Homology
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Match:
A0A835ZBG2_9STRA (Phosphotyrosine protein phosphatase I superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBG2_9STRA)
HSP 1 Score: 193 bits (490), Expect = 2.580e-58
Identity = 98/159 (61.64%), Postives = 121/159 (76.10%), Query Frame = 1
Query: 142 KSVLFVCLGNICRSPTAEAVFTQKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDARMTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWGGDEMEALARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETV 618
K VLFVCLGNICRSP+AEAVF V+++ A + IDSCGTGGG WY GG S+HEG+ +DARMT+AAA+RG+ LTSISRP+ DL++FDLI+GMDGAN++AV+EA+ +WG E LA KLR MT+YC + K +ATVPDPYYGG GFE V
Sbjct: 33 KKVLFVCLGNICRSPSAEAVFRSVVEKA-EKADNFVIDSCGTGGGMRGWYRDGGRSYHEGDPADARMTEAAAQRGVHLTSISRPMRPSDLDEFDLIIGMDGANKQAVIEAAHYWGKKE---LAEAKLRNMTSYCTKHK---SATVPDPYYGGPEGFEKV 184
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Match:
A0A061R5H5_9CHLO (Protein-tyrosine phosphatase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061R5H5_9CHLO)
HSP 1 Score: 183 bits (465), Expect = 9.410e-54
Identity = 95/183 (51.91%), Postives = 124/183 (67.76%), Query Frame = 1
Query: 130 APPQKSVLFVCLGNICRSPTAEAVFTQKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDARMTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWG--GDEMEALARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETVTLT---ACLSVFTSCASL 663
A + SVLFVCLGNICRSPTAEAV T V+++G++ S + +DSCGTGGG+ NWY+ GG S+HEGE +D RMT+ AA+RG+ LTS SRPL DL +FD I+GMD +N ++ A+ +W G ++ RGKL+ MT+YCR KH VPDPYYGG +GFE V AC + C +
Sbjct: 80 ADRKTSVLFVCLGNICRSPTAEAVLTAVVKEAGLE-SRFVVDSCGTGGGNPNWYKEGGWSYHEGEDADPRMTEVAARRGVHLTSKSRPLKPDDLNRFDYIIGMDSSNMASIQVAADYWASKGYDIPKNYRGKLKTMTSYCR--KHKGETEVPDPYYGGTQGFERVLDLLDDACSGLLQDCMQM 259
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Match:
W7TSN9_9STRA (Protein tyrosine phosphatase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TSN9_9STRA)
HSP 1 Score: 181 bits (460), Expect = 9.430e-53
Identity = 99/180 (55.00%), Postives = 125/180 (69.44%), Query Frame = 1
Query: 79 NLHLSKAFVCPMNMSSSAPPQKSVLFVCLGNICRSPTAEAVFTQKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDARMTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWGGDEMEALARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETV 618
+LH+S P A KSVLFVCLGNICRSPTAEAVF V++ G +S IDSCGTGGG+ WY+ GG S+HEG+ +D+RM AA+KRGI +TS SRPL A+D++ FD ++ MDGAN+ AV+EA+ +WG + A K+RLMT YC +K +R TVPDPYYGG GFE V
Sbjct: 53 SLHMSNLDPAP------ASAAKSVLFVCLGNICRSPTAEAVFKSVVEREG-KSSHIHIDSCGTGGGNPGWYQKGGWSYHEGDMADSRMRAAASKRGIDITSRSRPLKAEDIDFFDFLICMDGANKSAVMEAADYWGKTQTAAK---KIRLMTEYCTINKGAR--TVPDPYYGGADGFEKV 220
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Match:
A0A7S3A8J4_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A8J4_9RHOD)
HSP 1 Score: 180 bits (456), Expect = 1.220e-52
Identity = 95/167 (56.89%), Postives = 124/167 (74.25%), Query Frame = 1
Query: 118 MSSSAPPQKSVLFVCLGNICRSPTAEAVFTQKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDARMTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWGGDEMEALARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETV 618
MSSS Q SVLFVCLGNICRSPTAEA+F V++ G A+ + IDSCGTGGG+ +W+ GG S+HEG+SSD+RM + AAKRGI LTS SRPLN +DLEKFD I+GMD +N + +++A+++WG + ++ LA+ K LM +Y +S+ VPDPYYGG GFE V
Sbjct: 62 MSSS---QSSVLFVCLGNICRSPTAEAMFKTVVEREG-KAATYEIDSCGTGGGNPDWFTEGGWSYHEGDSSDSRMMQTAAKRGIALTSRSRPLNKEDLEKFDRIIGMDSSNYKEIMKAAQYWGPEYLD-LAKQKTSLMLDYS---SNSKGKPVPDPYYGGPDGFEKV 220
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Match:
A0A7J7PNS1_9CHLO (Phosphotyrosine protein phosphatase I superfamily n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PNS1_9CHLO)
HSP 1 Score: 180 bits (457), Expect = 3.330e-52
Identity = 91/164 (55.49%), Postives = 117/164 (71.34%), Query Frame = 1
Query: 139 QKSVLFVCLGNICRSPTAEAVFTQKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDARMTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWGGDEMEAL----ARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETV 618
++SVLFVCLGNICRSPTAEA+F V+++G+ A+++ IDSCGTGGGS NWY GG S+HEG+ SD+RMT AA KRG++LTS SRPL DL++FD I+GMD N R +L+A+ +W + + R K LMT YC + K A VPDPYYGG GF+ V
Sbjct: 67 KRSVLFVCLGNICRSPTAEAMFRSVVEKAGL-ANQFDIDSCGTGGGSSNWYLPGGFSYHEGDESDSRMTAAAVKRGVRLTSTSRPLQPSDLKRFDYIIGMDPRNVRDILKAASYWAEQDQQLPRLDEVRSKTSLMTRYCSKAK--AADEVPDPYYGGPAGFDLV 227
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Match:
A0A2V0PHL2_9CHLO (Tyrosine phosphatase n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PHL2_9CHLO)
HSP 1 Score: 176 bits (447), Expect = 6.850e-52
Identity = 92/162 (56.79%), Postives = 114/162 (70.37%), Query Frame = 1
Query: 148 VLFVCLGNICRSPTAEAVFTQKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDARMTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWGGDEMEAL-----ARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETV 618
VLFVCLGNICRSPTAEA+F V++ G+ A + IDSCGTGGG+ WY+ GG S+HEG+ +D RMT AAA RG++LTS SRPL D +F IVGMDGAN RA+L A+ FW + + ARG++ LMT+YC E + VPDPYYGG +GFETV
Sbjct: 18 VLFVCLGNICRSPTAEAMFRAVVEREGV-AGAFDIDSCGTGGGASGWYKPGGFSYHEGDPADPRMTAAAAGRGVRLTSRSRPLAPADFGRFKYIVGMDGANVRAILTAADFWAANGSADVPPAEEARGQVSLMTSYCTETEG--VTEVPDPYYGGPQGFETV 176
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Match:
A0A5D6YDH1_9STRA (LMWPc domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDH1_9STRA)
HSP 1 Score: 176 bits (445), Expect = 7.590e-52
Identity = 95/176 (53.98%), Postives = 116/176 (65.91%), Query Frame = 1
Query: 145 SVLFVCLGNICRSPTAEAVFT----QKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDARMTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWGGDEMEALARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETVT---LTACLSVFTS 651
SVLFVCLGNICRSP EAVF QK SG+ A E+ +DSCGTGGGS NWY+ G +FHEGE SDARMTK A KRG LTS +R L +D+E FD I+ M+ N AVLEA+ WGG E LA K+++MT+YC K + A VPDP+Y G GF+ V AC+ ++ S
Sbjct: 3 SVLFVCLGNICRSPAGEAVFQAIVEQKAASSGVRADEFRVDSCGTGGGSANWYKPNGFAFHEGERSDARMTKEAKKRGYSLTSRARSLTPRDIEDFDYIICMESKNRAAVLEAAEAWGGAESRELAAQKVKMMTSYCT--KFTTATRVPDPWYEG--GFDNVLDLLEDACVGLYES 174
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Match:
A0A7S0BPS6_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BPS6_9RHOD)
HSP 1 Score: 176 bits (447), Expect = 1.190e-51
Identity = 89/160 (55.62%), Postives = 118/160 (73.75%), Query Frame = 1
Query: 139 QKSVLFVCLGNICRSPTAEAVFTQKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDARMTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWGGDEMEALARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETV 618
Q SVLFVCLGNICRSPTAEA+F V++ G A+ + IDSCGTGGG+ +W+ GG S+HEG+ SD+RM + AA RGI LTS SRPLN +DLEKFD I+GMD +N + +++A+++WG + ++ LA+ K LM +Y H++ VPDPYYGG GFE V
Sbjct: 41 QSSVLFVCLGNICRSPTAEAMFRTVVERDG-KAAAYEIDSCGTGGGNPDWFTEGGWSYHEGDPSDSRMMQTAANRGIALTSRSRPLNKEDLEKFDRIIGMDSSNYKEIMKAAQYWGPEYLD-LAKKKTSLMLDYS---SHNKGKPVPDPYYGGPDGFEKV 195
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Match:
A0A7S2XZB6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XZB6_9STRA)
HSP 1 Score: 173 bits (438), Expect = 4.220e-50
Identity = 89/157 (56.69%), Postives = 112/157 (71.34%), Query Frame = 1
Query: 148 VLFVCLGNICRSPTAEAVFTQKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDARMTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWGGDEMEALARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETV 618
V+FVCLGNICRSPTAEAVF +KVQ +G ++ I+SCGTGGGS +WY G S+HEGES D RMT AA+ RGI L SRPL +DL+ FD I+ MDG+N++A+ EA+ +WG A A K ++MT+YC K +VPDPYYGG +GFETV
Sbjct: 62 VIFVCLGNICRSPTAEAVFDKKVQDAGRQ-DQFFIESCGTGGGSADWYMQSGFSYHEGESPDRRMTAAASNRGITLCGASRPLTPEDLDIFDYIIAMDGSNKQAITEAASYWG---KSAQAAQKTKMMTSYC---KKFDMKSVPDPYYGGAQGFETV 211
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Match:
A0A0G4EHG9_VITBC (LMWPc domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EHG9_VITBC)
HSP 1 Score: 173 bits (438), Expect = 4.340e-50
Identity = 91/165 (55.15%), Postives = 111/165 (67.27%), Query Frame = 1
Query: 124 SSAPPQKSVLFVCLGNICRSPTAEAVFTQKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDARMTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWGGDEMEALARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETV 618
SS + SVLFVCLGNICRSPTAEAV + Q G+ IDSCGTGGGS NWY+ G S+HEGE SD RM+ AA KRGI+LTS SRPL D ++FDL++GM+ N + + A+R WG ++ R K LMT+YCRE + VPDPYYGG +GFE V
Sbjct: 48 SSPSSEPSVLFVCLGNICRSPTAEAVLRKLAQDKGLRVE---IDSCGTGGGSDNWYKPDGFSYHEGEPSDERMSTAAKKRGIRLTSRSRPLRPDDFDRFDLVIGMEEKNRQEIFRAARAWG--RLDEAVR-KTVLMTDYCRE--YGDVTAVPDPYYGGQKGFEKV 204
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1027.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.58e-58 / Id = 61.64 Expect = 9.41e-54 / Id = 51.91 Expect = 9.43e-53 / Id = 55.00 Expect = 1.22e-52 / Id = 56.89 Expect = 3.33e-52 / Id = 55.49 Expect = 6.85e-52 / Id = 56.79 Expect = 7.59e-52 / Id = 53.98 Expect = 1.19e-51 / Id = 55.63 Expect = 4.22e-50 / Id = 56.69 Expect = 4.34e-50 / Id = 55.15 Sequence A0A835ZBG2_9STRA A0A061R5H5_9CHLO W7TSN9_9STRA A0A7S3A8J4_9RHOD A0A7J7PNS1_9CHLO A0A2V0PHL2_9CHLO A0A5D6YDH1_9STRA A0A7S0BPS6_9RHOD A0A7S2XZB6_9STRA A0A0G4EHG9_VITBC
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1
Start 1
Seed ortholog 2880.D8LN75
Preferred name stp1
PFAMs LMWPc
Model size 767
Max annot lvl 2759|Eukaryota
KEGG rclass RC00017
KEGG ko ko:K01104,ko:K14394
KEGG Reaction R00548,R02135
KEGG Pathway ko00730,ko00740,ko01100,map00730,map00740,map01100
Hectar predicted targeting category signal peptide
GOs GO:0003674,GO:0003824,GO:0003993,GO:0004721,GO:0004725,GO:0004726,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006464,GO:0006470,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019538,GO:0023052,GO:0035335,GO:0036211,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0071704,GO:0140096,GO:1901564
Exons 7
Evalue 1.84e-54
EggNOG OGs COG0394@1|root,KOG3217@2759|Eukaryota
EC 3.1.3.2,3.1.3.48
Description non-membrane spanning protein tyrosine phosphatase activity
Cds size 630
COG category T
BRITE ko00000,ko00001,ko01000,ko01009
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586763.6033268-UTR-C-australica_Contig_1027:4103..4201 1682586763.6033268-UTR-C-australica_Contig_1027:4103..4201 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_1027 4104..4201 -
1682586763.6878982-UTR-C-australica_Contig_1027:5905..5944 1682586763.6878982-UTR-C-australica_Contig_1027:5905..5944 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_1027 5906..5944 -
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586763.6166162-CDS-C-australica_Contig_1027:4201..4321 1682586763.6166162-CDS-C-australica_Contig_1027:4201..4321 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1027 4202..4321 -
1682586763.626576-CDS-C-australica_Contig_1027:4507..4588 1682586763.626576-CDS-C-australica_Contig_1027:4507..4588 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1027 4508..4588 -
1682586763.636204-CDS-C-australica_Contig_1027:4880..4943 1682586763.636204-CDS-C-australica_Contig_1027:4880..4943 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1027 4881..4943 -
1682586763.646345-CDS-C-australica_Contig_1027:5152..5259 1682586763.646345-CDS-C-australica_Contig_1027:5152..5259 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1027 5153..5259 -
1682586763.6567981-CDS-C-australica_Contig_1027:5503..5587 1682586763.6567981-CDS-C-australica_Contig_1027:5503..5587 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1027 5504..5587 -
1682586763.6670215-CDS-C-australica_Contig_1027:5653..5726 1682586763.6670215-CDS-C-australica_Contig_1027:5653..5726 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1027 5654..5726 -
1682586763.6771114-CDS-C-australica_Contig_1027:5803..5905 1682586763.6771114-CDS-C-australica_Contig_1027:5803..5905 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1027 5804..5905 -
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1027.2.1
>prot_C-australica_Contig_1027.2.1 ID=prot_C-australica_Contig_1027.2.1|Name=mRNA_C-australica_Contig_1027.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=210bp
MNLVLLLLVILSVNLHLSKAFVCPMNMSSSAPPQKSVLFVCLGNICRSPT AEAVFTQKVQQSGIDASEWTIDSCGTGGGSGNWYEVGGMSFHEGESSDAR MTKAAAKRGIKLTSISRPLNAKDLEKFDLIVGMDGANERAVLEASRFWGG DEMEALARGKLRLMTNYCREDKHSRAATVPDPYYGGDRGFETVTLTACLS VFTSCASLI* back to top mRNA from alignment at C-australica_Contig_1027:4104..5944-
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1027.2.1 ID=mRNA_C-australica_Contig_1027.2.1|Name=mRNA_C-australica_Contig_1027.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1841bp|location=Sequence derived from alignment at C-australica_Contig_1027:4104..5944- (Chrysoparadoxa australica CS_1217)ACAGAGACCCCAAAGCAAGCCCAAACACTGAGAGCGTTG ATGAATCTGGT
GCTCTTACTGCTTGTGATCCTCTCTGTCAACCTTCATCTGTCCAAGGCCT
TCGTTTGCCCGATGAACATGTCATCGTCCGCACCCCCTCAG GTACAGTGT
ACTTTACACTGACCCTTACTCTATGCCATAATCTCCCTCACAAACCATTA
ACTACGTCTTCCCCGCAGAAAAGCGTGCTCTTCGTCTGTCTCGGCAATAT
CTGCCGGAGCCCTACTGCTGAAGCTGTATTTACACAGAAGG GTCAGTACG
GTTGTTATTGCGAAGCGTTGGCAGTTGGCTGGGAGCCCTAACTCGTCCCT
GCTCCAGTCCAACAGAGTGGCATAGATGCGAGTGAGTGGACAATAGACAG
CTGCGGCACTGGCGGTGGGTCTGGCAATTGGTACGAAGTCG GTGAGTGAG
TGGCCCTCGTACCGCAACCACCACTCTCTAGCTTTCTATTATTTCTCAAT
TGGAGAGTTGAGGGTATAAAAAATCTTAGCTAACTGTTTTTGTCCTGGAA
GCTCAACTGCACTCTAGCTCACATGGCTTATGCCTCGCTCACCCACTCAG
AAATGCCCCTGCACAGCTACCCATCTTTTGATGAGGGGTGATCATCCTTA
CAGCCGCCTGGTCCCTTCGTCACTTGGCCCCTCAGGTGGCATGAGCTTTC
ACGAAGGTGAAAGCTCTGACGCGCGCATGACCAAGGCGGCTGCCAAGAGA
GGCATCAAGCTCACCTCCATCTCAAGGCCACTCAATGCTAAG GTACCAAT
TGACAGCGACAGCAGGATTTTAAGCGTACCACTCGCTCACACTGCTTGGT
AATCCGCTCATTTATCACATCTCACTTGGTGATGTATGATATGTATCCCA
CTCTTTCTGAGGTGCTACAACAATAGTCACTCTCTTTCATGGGTTGTGGT
ATTGGGGCTTGCTAACCCCACATCCTCTCCACTCCTGCCTGCCCTGCCTA
GGATTTGGAGAAATTTGACCTGATCGTGGGTATGGACGGCGCCAATGAGA
GGGCAGTGCTTGAG GTGAGTGAGAAGCGGTAACTGAGTGAGTTATGATTT
GCTGAGAGATTTAGCAAGTTACTGGCTGACGTGCTAAGTGAGTTGGTGAT
GAGCGAAGGTGCTGCCAAGACAAGTGAGCAAGAGGGTGGCTCACTTCTCC
AGGGAAAGCTCTCGTGCCATTGCTTGGTGCAATGGGATCCCCTAACGAGA
ACCAAAGGCCAGGGATGCAGACTGTTGAGTACACTAACGCGTAAACTGTA
CGGCCTAGTTAGTCAGTTTGCTCTCCCTTATCTGCTCAAGTAACTGCTGC
ATGCAGGCTAGCCGCTTCTGGGGAGGCGATGAGATGGAGGCTCTTGCCAG
AGGGAAGCTACGTCTCATGACGAACTATTGCCGGGAG GTAAAGTGCTGCT
GCTGTTGCTCCTGCTGTTGCTATTAGTGCATCAAAAGCCACTCAGAGCAC
ACCCCCTTCACTCATCCTACCTGTAATGAATGCTCTGTTCGCTTGGCCAT
ACCTCTGGATAGTAACCTTACCTTACCTTGCCTGGCCTGGCCCTTTCTCC
CTGGTTGGTTGATGTCACCTCAGGATAAGCACTCTCGGGCAGCAACTGTG
CCGGATCCGTACTATGGTGGTGATCGGGGGTTTGAAACGGTCACATTGAC
TGCCTGCCTGTCTGTCTTCACCTCATGCGCCAGCCTCATCTAA TCCAACC
CACGCATCTTGACCCGCTGGCAACTTAGGTGTTAGATCTGCTTGAAGACG
CCTGCCAGGGGCTGCTAGACAAGAGCATGAAGGGTGAGGCT back to top Coding sequence (CDS) from alignment at C-australica_Contig_1027:4104..5944-
>mRNA_C-australica_Contig_1027.2.1 ID=mRNA_C-australica_Contig_1027.2.1|Name=mRNA_C-australica_Contig_1027.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=630bp|location=Sequence derived from alignment at C-australica_Contig_1027:4104..5944- (Chrysoparadoxa australica CS_1217) ATGAATCTGGTGCTCTTACTGCTTGTGATCCTCTCTGTCAACCTTCATCT GTCCAAGGCCTTCGTTTGCCCGATGAACATGTCATCGTCCGCACCCCCTC AGAAAAGCGTGCTCTTCGTCTGTCTCGGCAATATCTGCCGGAGCCCTACT GCTGAAGCTGTATTTACACAGAAGGTCCAACAGAGTGGCATAGATGCGAG TGAGTGGACAATAGACAGCTGCGGCACTGGCGGTGGGTCTGGCAATTGGT ACGAAGTCGGTGGCATGAGCTTTCACGAAGGTGAAAGCTCTGACGCGCGC ATGACCAAGGCGGCTGCCAAGAGAGGCATCAAGCTCACCTCCATCTCAAG GCCACTCAATGCTAAGGATTTGGAGAAATTTGACCTGATCGTGGGTATGG ACGGCGCCAATGAGAGGGCAGTGCTTGAGGCTAGCCGCTTCTGGGGAGGC GATGAGATGGAGGCTCTTGCCAGAGGGAAGCTACGTCTCATGACGAACTA TTGCCGGGAGGATAAGCACTCTCGGGCAGCAACTGTGCCGGATCCGTACT ATGGTGGTGATCGGGGGTTTGAAACGGTCACATTGACTGCCTGCCTGTCT GTCTTCACCTCATGCGCCAGCCTCATCTAA back to top