mRNA_C-australica_Contig_10264.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10264.1.1
Unique NamemRNA_C-australica_Contig_10264.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Match: A0A2D4SGE2_9GAMM (Transporter n=1 Tax=Salinisphaeraceae bacterium TaxID=2026789 RepID=A0A2D4SGE2_9GAMM)

HSP 1 Score: 387 bits (994), Expect = 1.030e-130
Identity = 198/276 (71.74%), Postives = 225/276 (81.52%), Query Frame = 1
Query:    1 SYFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYGTGHTREPEALDGDVPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTDFESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNTASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSASGGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVITLLTICGLTHRQAYPDIAVVSLLIPFL 828
            SYFGTTAFAA +LGL     MV GG  WLN+RLR AR AGEGYG GHT+EP +L G+ P    ALLPI  VIG+N  MV Y +PGWDT YL  + YG T  E++RG WG+I ALL A + VAA+HFRS   LN+TL  GAMG+LLP FNTASEVGYG TIA+LAAFAVV+++VLN+SPGNPLISEM AVNVLAGITGSASGGLGIAL ALGETY ++A + G++PE MHRIASMSSGGFDSLPHNGA+ITLLTICGLTHRQAY DIAVVS+LIPFL
Sbjct:  172 SYFGTTAFAAPILGLVGGAAMVTGGVTWLNFRLRKARAAGEGYGEGHTQEPGSLAGETPHVLLALLPIALVIGVNYAMVEYWIPGWDTDYLAGEQYGETSIEALRGFWGMITALLAANIAVAAIHFRSIETLNKTLGAGAMGALLPTFNTASEVGYGATIASLAAFAVVRDAVLNLSPGNPLISEMAAVNVLAGITGSASGGLGIALGALGETYLQMAQAAGIDPEIMHRIASMSSGGFDSLPHNGAIITLLTICGLTHRQAYGDIAVVSVLIPFL 447          
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Match: A0A2E3NV07_9GAMM (Transporter n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A2E3NV07_9GAMM)

HSP 1 Score: 365 bits (938), Expect = 3.020e-122
Identity = 182/274 (66.42%), Postives = 216/274 (78.83%), Query Frame = 1
Query:    4 YFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYGTGHTREPEALDGDVPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTDFESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNTASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSASGGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVITLLTICGLTHRQAYPDIAVVSLLIPF 825
            YF TTAFAA VLG+     M GGG  WLN R+RAAR  GEGYG GH  EP   DG  P FW ALLPIV VIG+N  +V +V+P WDT +L  D +GNT    +RGLW +I ALL+A L V  +H+RS   LNR++T  A GSLLP FNTASEVGYGTTIA+L+AF +VK +V+N+SPGNPLISEMVA+NVLAGITGSASGGL IAL+ALG+TYN+LA  LGV+ E MHR+ASM+ GGFD+LPHNGAVITLLTICGL+H+QAY DIA+VS++IPF
Sbjct:  172 YFETTAFAAPVLGIVGGLGMFGGGVWWLNRRMRAARAVGEGYGAGHHNEPTEFDGATPSFWVALLPIVLVIGVNYALVEWVIPSWDTAFLAEDRFGNTGIGRLRGLWAMIVALLVANLTVILIHYRSWDQLNRSMTAAANGSLLPTFNTASEVGYGTTIASLSAFVLVKNAVINVSPGNPLISEMVAINVLAGITGSASGGLSIALAALGDTYNQLAVDLGVSKELMHRVASMACGGFDTLPHNGAVITLLTICGLSHKQAYKDIAMVSMVIPF 445          
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Match: A0A363UJT7_9GAMM (Transporter n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A363UJT7_9GAMM)

HSP 1 Score: 357 bits (916), Expect = 6.440e-119
Identity = 182/274 (66.42%), Postives = 215/274 (78.47%), Query Frame = 1
Query:    4 YFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYGTGHTREPEALDGDVPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTDFESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNTASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSASGGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVITLLTICGLTHRQAYPDIAVVSLLIPF 825
            YF TTAFAA VLGL     M+GGG  WLN R R AR AGEGYG GH+ EP   DG  PGF  A+LPIV VIG+N  +V +++P WDT YL T+ +GNTD   +RGLW +I ALL+A L V  +H+RS   LN +L   A GSLLP FNTASEVGYGTTIA+L+AF +VK +V+N++PGNPLISEMVA+NVLAGITGSASGGL IAL+ALG+TYN+LAA L +  E MHRIASM+ GGFD+LPHNGAVITLLTICGLTHRQAY DIA+V++ IPF
Sbjct:  172 YFETTAFAAPVLGLLGGLGMMGGGVWWLNRRYRQARAAGEGYGRGHSNEPAQFDGPTPGFAVAVLPIVLVIGVNFALVEWLIPNWDTAYLATEEFGNTDIGKLRGLWAMIVALLVANLSVILIHYRSWDQLNGSLKLAANGSLLPTFNTASEVGYGTTIASLSAFVLVKNAVVNVAPGNPLISEMVAINVLAGITGSASGGLSIALAALGDTYNQLAADLNIPRELMHRIASMACGGFDTLPHNGAVITLLTICGLTHRQAYKDIAMVTIGIPF 445          
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Match: UPI0012AEC726 (GntP family permease n=1 Tax=Marinicella rhabdoformis TaxID=2580566 RepID=UPI0012AEC726)

HSP 1 Score: 324 bits (831), Expect = 4.400e-106
Identity = 166/275 (60.36%), Postives = 210/275 (76.36%), Query Frame = 1
Query:    1 SYFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYGTGHTREPEALDGD-VPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTDFESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNTASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSASGGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVITLLTICGLTHRQAYPDIAVVSLLIP 822
            SYFGT  +AA ++G+ A   M+ GG LW+N R++  +   EGYG  HT EPE LD   +P    ALLPIV V+ +N ++ ++++P WDTGYL    YG      +  +W +I ALL A L+V AVH+R    +N+T+T GA+GS+LP FNT SEVGYG TIA+LAAF +VK++V+NISPGNPLISE+VAVNVLAGITGSASGGL IAL ALGETY +LA    +NPE+MHR+ASM+SGGFDSLPHNGAVITLLTICGL+H+Q+Y DIA+VSL+IP
Sbjct:  171 SYFGTNMYAAPLIGICAGLAMMVGGLLWINKRIKTHQA--EGYGENHTHEPEHLDSQHLPNLMLALLPIVVVVLLNFLLQKHIIPSWDTGYLAEAKYGAISVNKLVAVWSMIIALLAANLVVIAVHWRRFVSINQTMTKGALGSMLPTFNTGSEVGYGATIASLAAFVLVKDAVINISPGNPLISEVVAVNVLAGITGSASGGLTIALEALGETYAQLAQQYSINPEWMHRLASMASGGFDSLPHNGAVITLLTICGLSHKQSYKDIAMVSLVIP 443          
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Match: A0A7Y5SHA6_9BACT (GntP family permease n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5SHA6_9BACT)

HSP 1 Score: 321 bits (823), Expect = 7.780e-105
Identity = 165/273 (60.44%), Postives = 202/273 (73.99%), Query Frame = 1
Query:    4 YFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYGTGHTREPEALDGDVPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTDFESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNTASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSASGGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVITLLTICGLTHRQAYPDIAVVSLLIP 822
            YF TTAFAA  LG+    +M+  G  WLN R R A RAGEGYGTGH  E  A +G +P    A LPIVAVI +N V    V+P WD  YL    +G+T    V+G+W I+ ALL+A  LVAA+++RS + +N  +  GA GSL+P+FNTAS VGYG TIA+LAAFA VK  VL ISPGNPL+SE VA+++LAGITGSASGGL IAL ALG TY +LA   G++PE MHR+A+M+SGG D+LPHNGAVITLLTICGLTHRQ+Y DIAVVS+++P
Sbjct:  172 YFKTTAFAAPALGMIGGLLMLAAGMAWLNRRARRAARAGEGYGTGHVNESAAPEGGLPSLAAACLPIVAVIALNYVFAEQVIPRWDASYLTEAKFGSTSLSEVQGIWSILAALLVAIGLVAALNYRSLSAMNDAVGKGAAGSLVPIFNTASVVGYGATIASLAAFAAVKSWVLGISPGNPLVSEAVAISILAGITGSASGGLSIALEALGGTYYQLAIDTGISPELMHRVAAMASGGLDTLPHNGAVITLLTICGLTHRQSYKDIAVVSVIVP 444          
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Match: A0A7V2WR93_9GAMM (GntP family permease n=1 Tax=Oceanospirillales bacterium TaxID=1914300 RepID=A0A7V2WR93_9GAMM)

HSP 1 Score: 320 bits (819), Expect = 2.940e-104
Identity = 164/277 (59.21%), Postives = 209/277 (75.45%), Query Frame = 1
Query:    1 SYFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYGTGHTREPEA-LDGDVPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTDFESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNTASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSASGGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVITLLTICGLTHRQAYPDIAVVSLLIPFL 828
            SYFGTT +AA ++G  A  +++  G LW+N+R+  ++   EGYG  HT EPE   +  +P F TA+LPIV+VI IN +  ++++P WD  YL  D +GN     V  +W +I +L  A L+V  + +     LN++LT GAMGSLLP FNT SEVGYG TIA LAAFA+VKE+VLNISPGNPLISE+VA+NVLAGITGSASGGL IAL ALG+TYN+LA +  +  E+MHR+ASM+SGGFDSLPHNGAVITLLTICGL+H+Q+Y DIA+VSL+IP L
Sbjct:  172 SYFGTTIYAAPIIGTVAGLLIMTLGVLWINFRVAGSKA--EGYGQNHTNEPEVHAESSLPSFVTAILPIVSVIVINYIFTKHIIPNWDVSYLSEDKFGNIQLNKVASIWAMIISLFSANLVVILLFYNKFKDLNKSLTSGAMGSLLPTFNTGSEVGYGGTIAALAAFAIVKEAVLNISPGNPLISEVVAINVLAGITGSASGGLTIALGALGDTYNQLAQANNIPLEWMHRLASMASGGFDSLPHNGAVITLLTICGLSHKQSYKDIAMVSLVIPVL 446          
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Match: UPI001CBD36DB (GntP family permease n=1 Tax=Marinicella sp. NBU2979 TaxID=2873263 RepID=UPI001CBD36DB)

HSP 1 Score: 318 bits (815), Expect = 1.150e-103
Identity = 166/275 (60.36%), Postives = 207/275 (75.27%), Query Frame = 1
Query:    1 SYFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYGTGHTREPEAL-DGDVPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTDFESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNTASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSASGGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVITLLTICGLTHRQAYPDIAVVSLLIP 822
            SYFGT  +AA V+GL A   M+ GG  W+NWRL+      EGYG GH+ EP A  D  +P    ALLPIV V+  N V+ + ++P WDT YL +D +GN +   ++ +W +I AL++A L V A +++    +NR+LT GAMGS+LP FNTASEVGYG TIA+L AF +VKE+V+NISP NPLISE+VAVNVLAGITGSASGGL IAL ALG TY +LA    +NPE+MHR+ASM+SGGFDSLPHNGAVITLLTICGL+HRQ+Y DI +VSL+IP
Sbjct:  171 SYFGTDMYAAPVIGLLAGMAMMLGGLAWINWRLK--NTDSEGYGDGHSNEPVAFTDSRLPHLMVALLPIVVVVTANYVLQKIMIPTWDTSYLASDKFGNIEVGKLKSIWSMIMALMLAILTVLACNWQKIKDINRSLTQGAMGSMLPTFNTASEVGYGGTIASLGAFLLVKEAVINISPENPLISEVVAVNVLAGITGSASGGLTIALEALGNTYADLAQQFSINPEWMHRLASMASGGFDSLPHNGAVITLLTICGLSHRQSYKDIFMVSLVIP 443          
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Match: UPI0009871A04 (GntP family permease n=1 Tax=Marinicella sediminis TaxID=1792834 RepID=UPI0009871A04)

HSP 1 Score: 313 bits (801), Expect = 1.580e-101
Identity = 162/275 (58.91%), Postives = 206/275 (74.91%), Query Frame = 1
Query:    1 SYFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYGTGHTREPEAL-DGDVPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTDFESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNTASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSASGGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVITLLTICGLTHRQAYPDIAVVSLLIP 822
            SYFGT  +AA ++GL A   M+ GG  WLN R++  R   EGYG  H+ EP    D  +PG  T+L PI+ V+  N V+ + ++P WDT YLG++ +G  +   V+ +W +I ALL+A L V A+H++    +N T+T GAMGS+LP FNTASEVGYG TIA+L AF +VK++V+NISP NPLISE+VAVNVLAGITGSASGGL IAL ALG TY +LA    +NPE+MHR+ASM+SGGFDSLPHNGAVITLLTICGL+HRQ+Y DI +VSL+IP
Sbjct:  172 SYFGTDMYAAPLIGLLAGLGMMTGGLAWLNHRIKKYRE--EGYGDNHSNEPVVTEDRLLPGLLTSLAPILVVVLANFVLQKLIIPAWDTSYLGSEKFGQIEVGKVKSIWSMIIALLMANLAVVALHWKKLTDINGTMTKGAMGSMLPTFNTASEVGYGGTIASLGAFLLVKDAVINISPQNPLISEVVAVNVLAGITGSASGGLTIALEALGSTYAQLAEQFSINPEWMHRLASMASGGFDSLPHNGAVITLLTICGLSHRQSYKDIFMVSLVIP 444          
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Match: A0A4R6XKH4_9GAMM (H+/gluconate symporter-like permease n=1 Tax=Marinicella litoralis TaxID=644220 RepID=A0A4R6XKH4_9GAMM)

HSP 1 Score: 307 bits (787), Expect = 1.980e-99
Identity = 157/275 (57.09%), Postives = 208/275 (75.64%), Query Frame = 1
Query:    1 SYFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYGTGHTREPEAL-DGDVPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTDFESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNTASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSASGGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVITLLTICGLTHRQAYPDIAVVSLLIP 822
            SYFGT  +AA V+GL+A   M+ GG  W+N R+ A +   EGYG  H+ EP  + + ++P  W AL+PI+ V+  N ++ + V+P W+T YL  D +GN D   V+ +W +I AL++A + V A+++   + +N ++T GAMGS+LP FNTASEVGYG TIA+L AF +VK++V+NISP NPLISE+VAVNVLAGITGSASGGL IAL ALG TY +LA    +NPE+MHR+ASM+SGGFDSLPHNGAVITLLTICGL+H+Q+Y DI +VSL+IP
Sbjct:  172 SYFGTDMYAAPVIGLSAGLAMMLGGLWWINRRINAYKA--EGYGDNHSNEPILVQEQNLPSIWVALMPIIVVVLANFLLQKMVIPAWNTEYLSADKFGNMDVSKVKSIWSMIMALIMAVITVVALNWNKFSDVNGSMTKGAMGSMLPTFNTASEVGYGGTIASLGAFLLVKDAVINISPENPLISEVVAVNVLAGITGSASGGLTIALEALGGTYAQLAEQFSINPEWMHRLASMASGGFDSLPHNGAVITLLTICGLSHKQSYKDIFMVSLVIP 444          
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Match: A0A847DVC8_9BURK (GntP family permease n=1 Tax=Limnobacter sp. TaxID=2003368 RepID=A0A847DVC8_9BURK)

HSP 1 Score: 299 bits (766), Expect = 5.180e-96
Identity = 163/294 (55.44%), Postives = 208/294 (70.75%), Query Frame = 1
Query:    4 YFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYG----TGHTR------EPEALDG---------DVPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTDFESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNTASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSASGGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVITLLTICGLTHRQAYPDIAVVSLLIPFL 828
            +FGTT FAA  LGL AA +M  GG LWLN R RAA   GE Y     TG TR      +P+A+DG         ++PG   AL+PIV VI +N ++   V+P  +T YL  D YG T   +VRG+W +I AL+I+ +++  ++ +  A +  ++  G MGSLLP+FNTASEVGYG TIA+L AF V++++VLNISPGNPL+S  VAVNVLAG+TGSASGGL IAL  LGETY +LA   G++PE MHR+ASMSSGGFD+LPHNGAVITLL ICGLTHRQ+Y DI +V+++ P L
Sbjct:  171 FFGTTPFAAPGLGLIAAAIMFTGGMLWLNRRARAAAARGENYADSDTTGSTRGDSSVADPDAIDGGAVGTRAASELPGIVVALVPIVLVIALNALLTYVVIPAMNTEYLAQDRYGATHIGTVRGIWALIGALVISIVVLILMNLKRLADVKSSINAGTMGSLLPIFNTASEVGYGATIASLPAFIVIRDAVLNISPGNPLVSLAVAVNVLAGVTGSASGGLSIALQTLGETYMQLAQQFGIDPEVMHRVASMSSGGFDALPHNGAVITLLAICGLTHRQSYLDIFMVTIVAPLL 464          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10264.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D4SGE2_9GAMM1.030e-13071.74Transporter n=1 Tax=Salinisphaeraceae bacterium Ta... [more]
A0A2E3NV07_9GAMM3.020e-12266.42Transporter n=1 Tax=Xanthomonadales bacterium TaxI... [more]
A0A363UJT7_9GAMM6.440e-11966.42Transporter n=2 Tax=Gammaproteobacteria TaxID=1236... [more]
UPI0012AEC7264.400e-10660.36GntP family permease n=1 Tax=Marinicella rhabdofor... [more]
A0A7Y5SHA6_9BACT7.780e-10560.44GntP family permease n=1 Tax=Pirellulales bacteriu... [more]
A0A7V2WR93_9GAMM2.940e-10459.21GntP family permease n=1 Tax=Oceanospirillales bac... [more]
UPI001CBD36DB1.150e-10360.36GntP family permease n=1 Tax=Marinicella sp. NBU29... [more]
UPI0009871A041.580e-10158.91GntP family permease n=1 Tax=Marinicella sediminis... [more]
A0A4R6XKH4_9GAMM1.980e-9957.09H+/gluconate symporter-like permease n=1 Tax=Marin... [more]
A0A847DVC8_9BURK5.180e-9655.44GntP family permease n=1 Tax=Limnobacter sp. TaxID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10264contigC-australica_Contig_10264:1..828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1112209.AHVZ01000034_gene103
PFAMsGntP_permease,Na_H_antiporter
Model size828
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categorysignal peptide
Exons1
Evalue1e-95
EggNOG OGsCOG2610@1|root,COG2610@2|Bacteria,1N2VU@1224|Proteobacteria,1RNCQ@1236|Gammaproteobacteria,3NISZ@468|Moraxellaceae
DescriptionCOG2610 H gluconate symporter and related permeases
Cds size828
COG categoryEG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586763.277334-CDS-C-australica_Contig_10264:0..8281682586763.277334-CDS-C-australica_Contig_10264:0..828Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10264 1..828 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10264.1.1prot_C-australica_Contig_10264.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10264 1..828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10264.1.1

>prot_C-australica_Contig_10264.1.1 ID=prot_C-australica_Contig_10264.1.1|Name=mRNA_C-australica_Contig_10264.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=276bp
SYFGTTAFAARVLGLTAATMMVGGGALWLNWRLRAARRAGEGYGTGHTRE
PEALDGDVPGFWTALLPIVAVIGINLVMVRYVMPGWDTGYLGTDAYGNTD
FESVRGLWGIIPALLIAGLLVAAVHFRSRAGLNRTLTDGAMGSLLPMFNT
ASEVGYGTTIATLAAFAVVKESVLNISPGNPLISEMVAVNVLAGITGSAS
GGLGIALSALGETYNELAASLGVNPEFMHRIASMSSGGFDSLPHNGAVIT
LLTICGLTHRQAYPDIAVVSLLIPFL
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mRNA from alignment at C-australica_Contig_10264:1..828-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10264.1.1 ID=mRNA_C-australica_Contig_10264.1.1|Name=mRNA_C-australica_Contig_10264.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10264:1..828- (Chrysoparadoxa australica CS_1217)
TCGTATTTCGGCACCACGGCGTTTGCCGCGCGGGTGCTGGGACTGACGGC GGCCACGATGATGGTGGGCGGGGGCGCGCTGTGGCTGAATTGGCGGCTGC GGGCGGCGCGCCGAGCCGGCGAGGGCTACGGCACCGGGCATACCCGCGAG CCGGAAGCCCTCGATGGCGATGTCCCCGGCTTCTGGACCGCTCTACTGCC CATCGTCGCCGTGATCGGCATCAATCTGGTGATGGTCCGGTACGTCATGC CCGGCTGGGACACCGGCTATCTGGGCACGGACGCCTACGGCAATACCGAT TTCGAGTCCGTGCGCGGCCTGTGGGGCATCATCCCGGCGCTGCTGATCGC CGGTCTGCTGGTGGCGGCGGTGCATTTCCGCTCGCGAGCCGGACTCAATC GCACACTGACGGATGGCGCGATGGGCTCGCTGCTGCCGATGTTCAACACC GCCAGCGAGGTGGGCTATGGCACCACCATCGCCACGCTGGCGGCGTTTGC GGTGGTCAAGGAGTCGGTGCTCAATATTTCGCCGGGCAACCCGCTGATTT CCGAGATGGTGGCGGTGAATGTGCTGGCGGGTATTACCGGGTCGGCCTCG GGCGGCCTCGGCATCGCCCTGTCAGCGCTGGGCGAGACCTACAACGAGCT GGCGGCCAGCCTGGGCGTGAATCCGGAGTTCATGCACCGCATCGCCTCGA TGTCCTCGGGCGGCTTCGATTCGCTGCCGCACAACGGCGCGGTCATCACC CTGCTGACCATCTGCGGTCTGACCCACCGGCAGGCCTATCCGGATATCGC GGTGGTGTCACTGCTGATCCCCTTCCTG
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Coding sequence (CDS) from alignment at C-australica_Contig_10264:1..828-

>mRNA_C-australica_Contig_10264.1.1 ID=mRNA_C-australica_Contig_10264.1.1|Name=mRNA_C-australica_Contig_10264.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10264:1..828- (Chrysoparadoxa australica CS_1217)
TCGTATTTCGGCACCACGGCGTTTGCCGCGCGGGTGCTGGGACTGACGGC
GGCCACGATGATGGTGGGCGGGGGCGCGCTGTGGCTGAATTGGCGGCTGC
GGGCGGCGCGCCGAGCCGGCGAGGGCTACGGCACCGGGCATACCCGCGAG
CCGGAAGCCCTCGATGGCGATGTCCCCGGCTTCTGGACCGCTCTACTGCC
CATCGTCGCCGTGATCGGCATCAATCTGGTGATGGTCCGGTACGTCATGC
CCGGCTGGGACACCGGCTATCTGGGCACGGACGCCTACGGCAATACCGAT
TTCGAGTCCGTGCGCGGCCTGTGGGGCATCATCCCGGCGCTGCTGATCGC
CGGTCTGCTGGTGGCGGCGGTGCATTTCCGCTCGCGAGCCGGACTCAATC
GCACACTGACGGATGGCGCGATGGGCTCGCTGCTGCCGATGTTCAACACC
GCCAGCGAGGTGGGCTATGGCACCACCATCGCCACGCTGGCGGCGTTTGC
GGTGGTCAAGGAGTCGGTGCTCAATATTTCGCCGGGCAACCCGCTGATTT
CCGAGATGGTGGCGGTGAATGTGCTGGCGGGTATTACCGGGTCGGCCTCG
GGCGGCCTCGGCATCGCCCTGTCAGCGCTGGGCGAGACCTACAACGAGCT
GGCGGCCAGCCTGGGCGTGAATCCGGAGTTCATGCACCGCATCGCCTCGA
TGTCCTCGGGCGGCTTCGATTCGCTGCCGCACAACGGCGCGGTCATCACC
CTGCTGACCATCTGCGGTCTGACCCACCGGCAGGCCTATCCGGATATCGC
GGTGGTGTCACTGCTGATCCCCTTCCTG
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