mRNA_C-australica_Contig_10261.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10261.1.1
Unique NamemRNA_C-australica_Contig_10261.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A2E3XSI5_9PROT (Arginine--tRNA ligase n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E3XSI5_9PROT)

HSP 1 Score: 395 bits (1014), Expect = 9.050e-132
Identity = 187/288 (64.93%), Postives = 224/288 (77.78%), Query Frame = 1
Query:    4 DVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDL---CPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELI----------LESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828
            D+E+S  ++Y+ L  APN KMGH+AFGCFPLAK  RKGPPQ+A +L     KD    CP+  +V AQGPY+NFF+ KE+LG  V+ A N    F  E+             + KWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAG+D +AVTYPGDVGTHVAKCLWY+K +N+E +P+ +KGAWLG+MYTKANTLLEE+RGTDKE  NR  LT ILK+LHDQKGE++DLW ETK WSV LMKE+Y WADV FDRWFWESE+DAPSL +  EL ++G+L+KD+G
Sbjct:   34 DIELS--QVYSMLGLAPNLKMGHIAFGCFPLAKALRKGPPQIAAQL-----KDHVANCPLVEEVQAQGPYLNFFIKKESLGELVIAAANSHALFETEIFDLTTQDEKGKKRNEKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGIDTSAVTYPGDVGTHVAKCLWYYKFHNQEEVPKEDKGAWLGQMYTKANTLLEEQRGTDKEAENRESLTHILKELHDQKGEFYDLWLETKSWSVELMKETYSWADVEFDRWFWESEVDAPSLTYVKELYDQGKLIKDEG 314          
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A2E6HAZ7_9PROT (Arginine--tRNA ligase n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2E6HAZ7_9PROT)

HSP 1 Score: 355 bits (912), Expect = 1.290e-116
Identity = 164/276 (59.42%), Postives = 212/276 (76.81%), Query Frame = 1
Query:    1 PDVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828
            P+VE+  ++I + L PAPN KMGH AF CFPLAK+ + GPPQ+A +L+ A  K       +V+ QGPY+NFFL  +A G +V+  + +G++F +++  ++ K MIEYSQPNTHK LHVGHMRNLCLGNA+VRM +YAGV++   TYPGDVGTHVAKCLWYFK +N E+ PE  KGAWLG +Y+ AN LLE++ GT+KEE NR  LT ILK+L ++ GEY++LWKET+EWS+ALMKE+Y WADV FDRWFWESE+D+PSL  A E  +KG   +DDG
Sbjct:   25 PEVELKQEDIISALGPAPNLKMGHFAFPCFPLAKVAKMGPPQIAAKLLEAIEKP--DWVQEVITQGPYLNFFLGPKAYGEKVIAPIQKGDFFTQKISKDTRKTMIEYSQPNTHKELHVGHMRNLCLGNAIVRMSQYAGVEVIPSTYPGDVGTHVAKCLWYFKYHNTENPPEENKGAWLGRLYSNANNLLEDQVGTEKEEENRKILTAILKELEEKNGEYYELWKETREWSIALMKEAYSWADVEFDRWFWESEVDSPSLELAKEYHKKGFFKEDDG 298          
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A2H0QM08_9PROT (Arginine--tRNA ligase n=1 Tax=Bdellovibrio sp. CG11_big_fil_rev_8_21_14_0_20_39_38 TaxID=1975527 RepID=A0A2H0QM08_9PROT)

HSP 1 Score: 352 bits (903), Expect = 2.920e-115
Identity = 163/272 (59.93%), Postives = 209/272 (76.84%), Query Frame = 1
Query:   13 VSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828
            ++ + I N LT  P+ KMGH+AF CFPLAK  +  PP+++ EL++   ++  P+ +     GPY+NFFLD + LG   +  +  G YF ++LI  + K M+EYSQPNTHK LHVGHMRNLCLGNA+VR+ RYAGV+ TAVTYPGDVGTHVAKCLWY+K + K  IP   KGAWLG +Y+KA+ +LE++ GTDKE++NR +LT ILKQL  + GEY+DLWKET+EWS+ALMK +YDWADV FDRWFWESEMD+PSL +A ELL +G+LVKD G
Sbjct:   29 LTLESIANSLTEPPDKKMGHLAFPCFPLAKALKSAPPKISAELLSHLPQN--PLVTKATPVGPYLNFFLDLQTLGKIEIEEILNGNYFKRKLIAGNQKTMVEYSQPNTHKELHVGHMRNLCLGNAVVRIARYAGVETTAVTYPGDVGTHVAKCLWYYKNHYKGQIPTENKGAWLGTLYSKAHIMLEDQIGTDKEDSNRQQLTAILKQLEQKSGEYYDLWKETREWSIALMKSAYDWADVQFDRWFWESEMDSPSLEYAQELLAQGKLVKDQG 298          
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: T0C1C0_9PROT (Arginine--tRNA ligase n=2 Tax=Bacteriovoracales TaxID=2024979 RepID=T0C1C0_9PROT)

HSP 1 Score: 339 bits (870), Expect = 2.600e-110
Identity = 162/277 (58.48%), Postives = 204/277 (73.65%), Query Frame = 1
Query:    1 PDVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIA-AGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828
            PD ++  ++IY+ +  APN +M H AF  F  AK  R+GPPQ+A  ++    L+    V  D+ AQGPY+NF L  +A    ++  +  GE+F KEL    GK MIEYSQPNTHK LHVGHMRNLCLGNALVR+ +Y  VD+  VTYPGD GTHVAKCLWY K +N+++IPE  KG WLG +YT+ANT LE+E GTDKE+ NRA+LTEILKQLH ++GE+FDLW+ET++WS+ LMK++Y WA V FDRWF+ESEMDAPSL   +E  EKG  VKDDG
Sbjct:   23 PDTDIKREDIYSSIGQAPNIEMAHYAFPVFRFAKALRQGPPQIAATILEKVDLEANALVIKDLKAQGPYLNFTLTADAYFESLIAEIRTGEFFKKELTKGEGKTMIEYSQPNTHKELHVGHMRNLCLGNALVRIKQYCSVDVHPVTYPGDSGTHVAKCLWYLKYHNQDTIPEINKGEWLGRIYTRANTKLEDELGTDKEDDNRAKLTEILKQLHAEEGEFFDLWQETRQWSIDLMKKTYAWAGVEFDRWFFESEMDAPSLKICNEYYEKGLFVKDDG 299          
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: UPI000FDB6F35 (arginine--tRNA ligase n=1 Tax=Halobacteriovorax sp. HLS TaxID=2234000 RepID=UPI000FDB6F35)

HSP 1 Score: 335 bits (859), Expect = 1.080e-108
Identity = 154/276 (55.80%), Postives = 205/276 (74.28%), Query Frame = 1
Query:    1 PDVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828
            PD  ++ D IY  ++ APN KMGH+AF CFPLAK  +  P  ++G+L  +   +   +  +  + GPY+NFF++       +   +  GE+F KEL  E  K MIEYSQPNTHK +HVGHMRNLCLGNALVR+ +YA  D+ AVTYPGD GTHVAKCLWY K +NKE++PE++KG+WLG++YT+AN LLE++ G+D+EE NRA+LT ILK+L  + GEYFDLWKET++WS+ LMK +Y WADV FDRWF+ESE+D PSL    +L ++G+L+KDDG
Sbjct:   25 PDAALTIDSIYKLISLAPNMKMGHIAFPCFPLAKETKMAPNMISGKLAESISAN--GIIQEAKSVGPYLNFFINPAHFSKLLTEEIISGEFFKKELCSERPKTMIEYSQPNTHKEMHVGHMRNLCLGNALVRIKKYANQDVVAVTYPGDSGTHVAKCLWYLKYHNKEAVPETDKGSWLGKIYTRANLLLEDQLGSDQEEQNRAQLTAILKELESESGEYFDLWKETRQWSLDLMKSTYKWADVEFDRWFFESEVDTPSLELVKDLYKQGKLIKDDG 298          
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: E1WZ27_HALMS (Arginine--tRNA ligase n=2 Tax=Halobacteriovorax marinus TaxID=97084 RepID=E1WZ27_HALMS)

HSP 1 Score: 335 bits (858), Expect = 1.520e-108
Identity = 160/273 (58.61%), Postives = 204/273 (74.73%), Query Frame = 1
Query:   10 EVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828
            E+S ++I + ++ APN KMGH AF CFPLAK  +  P  +A E +A  ++    +  +    GPY+NFF++    G  +   +  GE+F KEL+ E  K MIEYSQPNTHK LHVGHMRNLCLGNALVR+ +YA  ++ AVTYPGD GTHVAKCLWY K +NKESIPE++KG WLG +YTKAN LLE+E GT+KE  NR +LT ILK+L ++ GEYFDLWKET+ WS+ +MKE+Y WADV FDRWF+ESE+D+PSL  A +L E+G+LVKDDG
Sbjct:   28 EISSEQINSLISIAPNMKMGHFAFPCFPLAKATKSAPNLIA-ETLAKSIQSQ-GIIQEAKNVGPYLNFFINPAQTGSELTNEVLSGEFFTKELVSERPKTMIEYSQPNTHKELHVGHMRNLCLGNALVRIKKYADQEVVAVTYPGDSGTHVAKCLWYLKYHNKESIPETDKGPWLGSIYTKANLLLEDELGTEKEAKNREQLTAILKELENESGEYFDLWKETRGWSLEMMKEAYKWADVEFDRWFFESEVDSPSLELAKKLYEEGKLVKDDG 298          
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A254Q7R0_9PROT (Arginine--tRNA ligase n=3 Tax=unclassified Bdellovibrio TaxID=2633795 RepID=A0A254Q7R0_9PROT)

HSP 1 Score: 330 bits (847), Expect = 6.120e-107
Identity = 159/273 (58.24%), Postives = 200/273 (73.26%), Query Frame = 1
Query:   10 EVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828
            ++S DEIY  L   PN  MG +A+GCF LAK  +KGPPQ++GEL A    D   + +   A GPY+N     +A G +VL  +  GE+F K L+ ++ K MIEYSQPNTHK LHVGHMRNLCLG+++VRM RYAG ++ + T+PGD+GTHVAKCLWY KK+N+E +P + KG WLG MY+KAN LLE++ GT +EE NR ELT ILKQL   KGEYFDLWKET+EWS+ LMK  Y WADVTFD W++ESEMDAPS A+  EL  +G+L K +G
Sbjct:   25 DLSADEIYKALVEPPNSDMGDLAYGCFILAKSLKKGPPQISGELAANMELDSNLIKAQ--AAGPYLNLTFAPQAFGEKVLNPILTGEHFKKALVEKAPKTMIEYSQPNTHKELHVGHMRNLCLGDSIVRMLRYAGREIVSATFPGDMGTHVAKCLWYMKKHNQEPVPTTGKGEWLGSMYSKANLLLEDQNGTPQEEVNRQELTAILKQLEAGKGEYFDLWKETREWSIELMKSVYKWADVTFDEWYFESEMDAPSAAWVKELYAEGKLEKSEG 295          
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: T0RIL4_9PROT (Arginine--tRNA ligase n=1 Tax=Bacteriovorax sp. Seq25_V TaxID=1201288 RepID=T0RIL4_9PROT)

HSP 1 Score: 330 bits (847), Expect = 6.650e-107
Identity = 160/276 (57.97%), Postives = 198/276 (71.74%), Query Frame = 1
Query:    1 PDVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828
            P+ +V    IYN +T  PN KMGH AF CF L+K  +  P ++A EL      +     S+V+ QGPY+NF L  +A G  +L  +N GE+F + L  +  K MIEYSQPNTHK LHVGHMRNLCLGNALV + +Y   D+  VTYPGD GTHVAKCLWY K +NKE+IPE+ KG WLG MY+ AN +LE++ GT+KE+ NRA+LTEILKQLH   GE+FDLW ET++WS+ LM+++YDWADV FDRWF+ESEMDAPSL    E  EKG  VKDDG
Sbjct:   25 PEYQVDELSIYNSITEPPNLKMGHFAFPCFLLSKDLKNAPVKIAVELKEK--IETSEFVSEVILQGPYVNFKLTAKAFGEYLLSDINSGEFFTRTLTNDRPKTMIEYSQPNTHKELHVGHMRNLCLGNALVHIKQYCNQDVVPVTYPGDSGTHVAKCLWYLKYHNKEAIPETGKGEWLGRMYSTANLMLEDQLGTEKEDENRAQLTEILKQLHAGSGEFFDLWTETRQWSLDLMQKTYDWADVKFDRWFFESEMDAPSLKLCQEYYEKGLFVKDDG 298          
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A2H0QA93_9PROT (Arginine--tRNA ligase n=1 Tax=Bdellovibrionales bacterium CG11_big_fil_rev_8_21_14_0_20_38_13 TaxID=1973928 RepID=A0A2H0QA93_9PROT)

HSP 1 Score: 329 bits (843), Expect = 2.650e-106
Identity = 157/275 (57.09%), Postives = 200/275 (72.73%), Query Frame = 1
Query:   13 VSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESE---KGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828
            ++ +E Y+ +   P F+MGH AFGCF LAK  +K PP +A EL      D   +   V A GPY+NF ++ +A G  V+  +    +F +E++  + K MIEYSQPNTHK+LHVGHMRNLCLGNAL++M R    D+ +VTYPGDVGTHVAKCLWY KK+N   IPE     KGAWLG++YTKA+  L++E GTD+EE NRAELT ILKQL    GEYFDLW+ET+EWS+ LM+++Y WADV FDRWF+ESE+DAPSL F  EL ++G+LVKDDG
Sbjct:   26 LTLEEAYSAIVEPPQFEMGHFAFGCFRLAKAMKKAPPAIAAELATKIQSD--DMLKSVSAAGPYLNFIINAKAYGDLVINPVLDESFFKREILETNPKTMIEYSQPNTHKVLHVGHMRNLCLGNALIKMGRSINADIISVTYPGDVGTHVAKCLWYLKKHNNSPIPEGSPETKGAWLGQIYTKASHKLDDELGTDQEEKNRAELTAILKQLESGSGEYFDLWRETREWSLRLMEKAYSWADVKFDRWFFESEVDAPSLKFIKELFDQGKLVKDDG 298          
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A2G8HVI3_9PROT (Arginine--tRNA ligase n=1 Tax=Halobacteriovorax sp. JY17 TaxID=2014617 RepID=A0A2G8HVI3_9PROT)

HSP 1 Score: 327 bits (837), Expect = 2.170e-105
Identity = 156/277 (56.32%), Postives = 206/277 (74.37%), Query Frame = 1
Query:    4 DVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGL--KDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828
            +V +S ++IYN ++ APN KMGH AF CFPLAK   K  P +  E +A  +  K +   A  V   GPY+NF ++       +   +  G++F KEL+ +  K MIEYSQPNTHK LHVGHMRNLCLGNALVR+ RYA  ++ AVTYPGD GTHVAKCLW+ K +N+E+IPE+ KG WLG++YTKAN +LE++ GT+KE  NR +LT ILK+L  +KGEYFDLWKET++WS+ +M+E+Y WADV FDRWF+ESE+D+PSL  A++L ++G+LVKDDG
Sbjct:   26 EVALSKEQIYNLISIAPNMKMGHFAFPCFPLAKAA-KSAPNIISEKLAQSIETKGIIAAAKGV---GPYLNFTINPNTFAGSLTDEIISGKFFEKELVSDRPKTMIEYSQPNTHKELHVGHMRNLCLGNALVRIKRYADQEVVAVTYPGDSGTHVAKCLWFLKYHNQEAIPETNKGPWLGKIYTKANLMLEDQLGTEKEAKNREQLTAILKELESEKGEYFDLWKETRQWSLDMMEEAYKWADVKFDRWFFESEVDSPSLELANKLYQEGKLVKDDG 298          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E3XSI5_9PROT9.050e-13264.93Arginine--tRNA ligase n=1 Tax=Halobacteriovoraceae... [more]
A0A2E6HAZ7_9PROT1.290e-11659.42Arginine--tRNA ligase n=1 Tax=Halobacteriovorax sp... [more]
A0A2H0QM08_9PROT2.920e-11559.93Arginine--tRNA ligase n=1 Tax=Bdellovibrio sp. CG1... [more]
T0C1C0_9PROT2.600e-11058.48Arginine--tRNA ligase n=2 Tax=Bacteriovoracales Ta... [more]
UPI000FDB6F351.080e-10855.80arginine--tRNA ligase n=1 Tax=Halobacteriovorax sp... [more]
E1WZ27_HALMS1.520e-10858.61Arginine--tRNA ligase n=2 Tax=Halobacteriovorax ma... [more]
A0A254Q7R0_9PROT6.120e-10758.24Arginine--tRNA ligase n=3 Tax=unclassified Bdellov... [more]
T0RIL4_9PROT6.650e-10757.97Arginine--tRNA ligase n=1 Tax=Bacteriovorax sp. Se... [more]
A0A2H0QA93_9PROT2.650e-10657.09Arginine--tRNA ligase n=1 Tax=Bdellovibrionales ba... [more]
A0A2G8HVI3_9PROT2.170e-10556.32Arginine--tRNA ligase n=1 Tax=Halobacteriovorax sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10261contigC-australica_Contig_10261:1..828 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1201290.M902_1225
Preferred nameargS
PFAMsArg_tRNA_synt_N,DALR_1,tRNA-synt_1d
Model size828
Max annot lvl213481|Bdellovibrionales
KEGG rclassRC00055,RC00523
KEGG koko:K01887
KEGG ReactionR03646
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.27e-111
EggNOG OGsCOG0018@1|root,COG0018@2|Bacteria,1MU4J@1224|Proteobacteria,42MTY@68525|delta/epsilon subdivisions,2MSNP@213481|Bdellovibrionales,2WKII@28221|Deltaproteobacteria
EC6.1.1.19
DescriptionArginyl-tRNA synthetase
Cds size828
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016,ko03029
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586763.175302-CDS-C-australica_Contig_10261:0..8281682586763.175302-CDS-C-australica_Contig_10261:0..828Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10261 1..828 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10261.1.1prot_C-australica_Contig_10261.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10261 1..828 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10261.1.1

>prot_C-australica_Contig_10261.1.1 ID=prot_C-australica_Contig_10261.1.1|Name=mRNA_C-australica_Contig_10261.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=276bp
PDVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAA
GLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILES
GKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDV
GTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEA
NRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFW
ESEMDAPSLAFAHELLEKGQLVKDDG
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mRNA from alignment at C-australica_Contig_10261:1..828-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10261.1.1 ID=mRNA_C-australica_Contig_10261.1.1|Name=mRNA_C-australica_Contig_10261.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10261:1..828- (Chrysoparadoxa australica CS_1217)
CCTGATGTTGAGGTTTCTTTTGACGAAATTTACAATTTTCTCACTCCAGC CCCTAACTTCAAAATGGGACATGTTGCCTTTGGTTGTTTTCCTCTCGCAA AAATCTGCAGAAAGGGACCACCTCAAGTAGCCGGTGAGCTCATTGCAGCA GGTCTTAAAGACCTTTGTCCCGTAGCTTCAGACGTTGTCGCCCAAGGTCC TTACATCAACTTCTTTCTCGATAAAGAGGCCCTTGGAATGAGAGTTCTAG GTGCGATGAACCGTGGTGAATATTTCAACAAAGAGCTCATTCTTGAATCC GGAAAATGGATGATTGAGTACTCGCAACCAAACACGCACAAAATCCTTCA CGTAGGACATATGAGAAACCTCTGCCTTGGGAATGCTCTTGTTCGCATGT GCCGTTATGCAGGTGTGGATATGACTGCGGTTACTTACCCTGGTGATGTT GGAACTCACGTTGCTAAATGTCTTTGGTATTTTAAAAAATATAACAAAGA ATCAATTCCAGAATCTGAAAAGGGTGCTTGGCTTGGTGAAATGTACACCA AGGCGAATACTCTTTTAGAAGAGGAAAGAGGAACGGATAAGGAAGAGGCT AACCGTGCTGAGCTAACGGAAATTCTCAAGCAACTTCACGATCAAAAAGG TGAATACTTTGATCTTTGGAAAGAAACCAAAGAGTGGAGTGTCGCCCTCA TGAAAGAGAGCTATGATTGGGCCGATGTCACCTTTGACCGCTGGTTCTGG GAATCAGAAATGGATGCTCCTTCCCTTGCGTTTGCTCACGAACTCCTTGA AAAAGGTCAGCTTGTTAAAGATGATGGT
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Coding sequence (CDS) from alignment at C-australica_Contig_10261:1..828-

>mRNA_C-australica_Contig_10261.1.1 ID=mRNA_C-australica_Contig_10261.1.1|Name=mRNA_C-australica_Contig_10261.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10261:1..828- (Chrysoparadoxa australica CS_1217)
CCTGATGTTGAGGTTTCTTTTGACGAAATTTACAATTTTCTCACTCCAGC
CCCTAACTTCAAAATGGGACATGTTGCCTTTGGTTGTTTTCCTCTCGCAA
AAATCTGCAGAAAGGGACCACCTCAAGTAGCCGGTGAGCTCATTGCAGCA
GGTCTTAAAGACCTTTGTCCCGTAGCTTCAGACGTTGTCGCCCAAGGTCC
TTACATCAACTTCTTTCTCGATAAAGAGGCCCTTGGAATGAGAGTTCTAG
GTGCGATGAACCGTGGTGAATATTTCAACAAAGAGCTCATTCTTGAATCC
GGAAAATGGATGATTGAGTACTCGCAACCAAACACGCACAAAATCCTTCA
CGTAGGACATATGAGAAACCTCTGCCTTGGGAATGCTCTTGTTCGCATGT
GCCGTTATGCAGGTGTGGATATGACTGCGGTTACTTACCCTGGTGATGTT
GGAACTCACGTTGCTAAATGTCTTTGGTATTTTAAAAAATATAACAAAGA
ATCAATTCCAGAATCTGAAAAGGGTGCTTGGCTTGGTGAAATGTACACCA
AGGCGAATACTCTTTTAGAAGAGGAAAGAGGAACGGATAAGGAAGAGGCT
AACCGTGCTGAGCTAACGGAAATTCTCAAGCAACTTCACGATCAAAAAGG
TGAATACTTTGATCTTTGGAAAGAAACCAAAGAGTGGAGTGTCGCCCTCA
TGAAAGAGAGCTATGATTGGGCCGATGTCACCTTTGACCGCTGGTTCTGG
GAATCAGAAATGGATGCTCCTTCCCTTGCGTTTGCTCACGAACTCCTTGA
AAAAGGTCAGCTTGTTAAAGATGATGGT
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