mRNA_C-australica_Contig_10261.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A2E3XSI5_9PROT (Arginine--tRNA ligase n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E3XSI5_9PROT) HSP 1 Score: 395 bits (1014), Expect = 9.050e-132 Identity = 187/288 (64.93%), Postives = 224/288 (77.78%), Query Frame = 1 Query: 4 DVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDL---CPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELI----------LESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828 D+E+S ++Y+ L APN KMGH+AFGCFPLAK RKGPPQ+A +L KD CP+ +V AQGPY+NFF+ KE+LG V+ A N F E+ + KWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAG+D +AVTYPGDVGTHVAKCLWY+K +N+E +P+ +KGAWLG+MYTKANTLLEE+RGTDKE NR LT ILK+LHDQKGE++DLW ETK WSV LMKE+Y WADV FDRWFWESE+DAPSL + EL ++G+L+KD+G Sbjct: 34 DIELS--QVYSMLGLAPNLKMGHIAFGCFPLAKALRKGPPQIAAQL-----KDHVANCPLVEEVQAQGPYLNFFIKKESLGELVIAAANSHALFETEIFDLTTQDEKGKKRNEKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGIDTSAVTYPGDVGTHVAKCLWYYKFHNQEEVPKEDKGAWLGQMYTKANTLLEEQRGTDKEAENRESLTHILKELHDQKGEFYDLWLETKSWSVELMKETYSWADVEFDRWFWESEVDAPSLTYVKELYDQGKLIKDEG 314
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A2E6HAZ7_9PROT (Arginine--tRNA ligase n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2E6HAZ7_9PROT) HSP 1 Score: 355 bits (912), Expect = 1.290e-116 Identity = 164/276 (59.42%), Postives = 212/276 (76.81%), Query Frame = 1 Query: 1 PDVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828 P+VE+ ++I + L PAPN KMGH AF CFPLAK+ + GPPQ+A +L+ A K +V+ QGPY+NFFL +A G +V+ + +G++F +++ ++ K MIEYSQPNTHK LHVGHMRNLCLGNA+VRM +YAGV++ TYPGDVGTHVAKCLWYFK +N E+ PE KGAWLG +Y+ AN LLE++ GT+KEE NR LT ILK+L ++ GEY++LWKET+EWS+ALMKE+Y WADV FDRWFWESE+D+PSL A E +KG +DDG Sbjct: 25 PEVELKQEDIISALGPAPNLKMGHFAFPCFPLAKVAKMGPPQIAAKLLEAIEKP--DWVQEVITQGPYLNFFLGPKAYGEKVIAPIQKGDFFTQKISKDTRKTMIEYSQPNTHKELHVGHMRNLCLGNAIVRMSQYAGVEVIPSTYPGDVGTHVAKCLWYFKYHNTENPPEENKGAWLGRLYSNANNLLEDQVGTEKEEENRKILTAILKELEEKNGEYYELWKETREWSIALMKEAYSWADVEFDRWFWESEVDSPSLELAKEYHKKGFFKEDDG 298
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A2H0QM08_9PROT (Arginine--tRNA ligase n=1 Tax=Bdellovibrio sp. CG11_big_fil_rev_8_21_14_0_20_39_38 TaxID=1975527 RepID=A0A2H0QM08_9PROT) HSP 1 Score: 352 bits (903), Expect = 2.920e-115 Identity = 163/272 (59.93%), Postives = 209/272 (76.84%), Query Frame = 1 Query: 13 VSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828 ++ + I N LT P+ KMGH+AF CFPLAK + PP+++ EL++ ++ P+ + GPY+NFFLD + LG + + G YF ++LI + K M+EYSQPNTHK LHVGHMRNLCLGNA+VR+ RYAGV+ TAVTYPGDVGTHVAKCLWY+K + K IP KGAWLG +Y+KA+ +LE++ GTDKE++NR +LT ILKQL + GEY+DLWKET+EWS+ALMK +YDWADV FDRWFWESEMD+PSL +A ELL +G+LVKD G Sbjct: 29 LTLESIANSLTEPPDKKMGHLAFPCFPLAKALKSAPPKISAELLSHLPQN--PLVTKATPVGPYLNFFLDLQTLGKIEIEEILNGNYFKRKLIAGNQKTMVEYSQPNTHKELHVGHMRNLCLGNAVVRIARYAGVETTAVTYPGDVGTHVAKCLWYYKNHYKGQIPTENKGAWLGTLYSKAHIMLEDQIGTDKEDSNRQQLTAILKQLEQKSGEYYDLWKETREWSIALMKSAYDWADVQFDRWFWESEMDSPSLEYAQELLAQGKLVKDQG 298
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: T0C1C0_9PROT (Arginine--tRNA ligase n=2 Tax=Bacteriovoracales TaxID=2024979 RepID=T0C1C0_9PROT) HSP 1 Score: 339 bits (870), Expect = 2.600e-110 Identity = 162/277 (58.48%), Postives = 204/277 (73.65%), Query Frame = 1 Query: 1 PDVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIA-AGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828 PD ++ ++IY+ + APN +M H AF F AK R+GPPQ+A ++ L+ V D+ AQGPY+NF L +A ++ + GE+F KEL GK MIEYSQPNTHK LHVGHMRNLCLGNALVR+ +Y VD+ VTYPGD GTHVAKCLWY K +N+++IPE KG WLG +YT+ANT LE+E GTDKE+ NRA+LTEILKQLH ++GE+FDLW+ET++WS+ LMK++Y WA V FDRWF+ESEMDAPSL +E EKG VKDDG Sbjct: 23 PDTDIKREDIYSSIGQAPNIEMAHYAFPVFRFAKALRQGPPQIAATILEKVDLEANALVIKDLKAQGPYLNFTLTADAYFESLIAEIRTGEFFKKELTKGEGKTMIEYSQPNTHKELHVGHMRNLCLGNALVRIKQYCSVDVHPVTYPGDSGTHVAKCLWYLKYHNQDTIPEINKGEWLGRIYTRANTKLEDELGTDKEDDNRAKLTEILKQLHAEEGEFFDLWQETRQWSIDLMKKTYAWAGVEFDRWFFESEMDAPSLKICNEYYEKGLFVKDDG 299
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: UPI000FDB6F35 (arginine--tRNA ligase n=1 Tax=Halobacteriovorax sp. HLS TaxID=2234000 RepID=UPI000FDB6F35) HSP 1 Score: 335 bits (859), Expect = 1.080e-108 Identity = 154/276 (55.80%), Postives = 205/276 (74.28%), Query Frame = 1 Query: 1 PDVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828 PD ++ D IY ++ APN KMGH+AF CFPLAK + P ++G+L + + + + + GPY+NFF++ + + GE+F KEL E K MIEYSQPNTHK +HVGHMRNLCLGNALVR+ +YA D+ AVTYPGD GTHVAKCLWY K +NKE++PE++KG+WLG++YT+AN LLE++ G+D+EE NRA+LT ILK+L + GEYFDLWKET++WS+ LMK +Y WADV FDRWF+ESE+D PSL +L ++G+L+KDDG Sbjct: 25 PDAALTIDSIYKLISLAPNMKMGHIAFPCFPLAKETKMAPNMISGKLAESISAN--GIIQEAKSVGPYLNFFINPAHFSKLLTEEIISGEFFKKELCSERPKTMIEYSQPNTHKEMHVGHMRNLCLGNALVRIKKYANQDVVAVTYPGDSGTHVAKCLWYLKYHNKEAVPETDKGSWLGKIYTRANLLLEDQLGSDQEEQNRAQLTAILKELESESGEYFDLWKETRQWSLDLMKSTYKWADVEFDRWFFESEVDTPSLELVKDLYKQGKLIKDDG 298
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: E1WZ27_HALMS (Arginine--tRNA ligase n=2 Tax=Halobacteriovorax marinus TaxID=97084 RepID=E1WZ27_HALMS) HSP 1 Score: 335 bits (858), Expect = 1.520e-108 Identity = 160/273 (58.61%), Postives = 204/273 (74.73%), Query Frame = 1 Query: 10 EVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828 E+S ++I + ++ APN KMGH AF CFPLAK + P +A E +A ++ + + GPY+NFF++ G + + GE+F KEL+ E K MIEYSQPNTHK LHVGHMRNLCLGNALVR+ +YA ++ AVTYPGD GTHVAKCLWY K +NKESIPE++KG WLG +YTKAN LLE+E GT+KE NR +LT ILK+L ++ GEYFDLWKET+ WS+ +MKE+Y WADV FDRWF+ESE+D+PSL A +L E+G+LVKDDG Sbjct: 28 EISSEQINSLISIAPNMKMGHFAFPCFPLAKATKSAPNLIA-ETLAKSIQSQ-GIIQEAKNVGPYLNFFINPAQTGSELTNEVLSGEFFTKELVSERPKTMIEYSQPNTHKELHVGHMRNLCLGNALVRIKKYADQEVVAVTYPGDSGTHVAKCLWYLKYHNKESIPETDKGPWLGSIYTKANLLLEDELGTEKEAKNREQLTAILKELENESGEYFDLWKETRGWSLEMMKEAYKWADVEFDRWFFESEVDSPSLELAKKLYEEGKLVKDDG 298
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A254Q7R0_9PROT (Arginine--tRNA ligase n=3 Tax=unclassified Bdellovibrio TaxID=2633795 RepID=A0A254Q7R0_9PROT) HSP 1 Score: 330 bits (847), Expect = 6.120e-107 Identity = 159/273 (58.24%), Postives = 200/273 (73.26%), Query Frame = 1 Query: 10 EVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828 ++S DEIY L PN MG +A+GCF LAK +KGPPQ++GEL A D + + A GPY+N +A G +VL + GE+F K L+ ++ K MIEYSQPNTHK LHVGHMRNLCLG+++VRM RYAG ++ + T+PGD+GTHVAKCLWY KK+N+E +P + KG WLG MY+KAN LLE++ GT +EE NR ELT ILKQL KGEYFDLWKET+EWS+ LMK Y WADVTFD W++ESEMDAPS A+ EL +G+L K +G Sbjct: 25 DLSADEIYKALVEPPNSDMGDLAYGCFILAKSLKKGPPQISGELAANMELDSNLIKAQ--AAGPYLNLTFAPQAFGEKVLNPILTGEHFKKALVEKAPKTMIEYSQPNTHKELHVGHMRNLCLGDSIVRMLRYAGREIVSATFPGDMGTHVAKCLWYMKKHNQEPVPTTGKGEWLGSMYSKANLLLEDQNGTPQEEVNRQELTAILKQLEAGKGEYFDLWKETREWSIELMKSVYKWADVTFDEWYFESEMDAPSAAWVKELYAEGKLEKSEG 295
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: T0RIL4_9PROT (Arginine--tRNA ligase n=1 Tax=Bacteriovorax sp. Seq25_V TaxID=1201288 RepID=T0RIL4_9PROT) HSP 1 Score: 330 bits (847), Expect = 6.650e-107 Identity = 160/276 (57.97%), Postives = 198/276 (71.74%), Query Frame = 1 Query: 1 PDVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828 P+ +V IYN +T PN KMGH AF CF L+K + P ++A EL + S+V+ QGPY+NF L +A G +L +N GE+F + L + K MIEYSQPNTHK LHVGHMRNLCLGNALV + +Y D+ VTYPGD GTHVAKCLWY K +NKE+IPE+ KG WLG MY+ AN +LE++ GT+KE+ NRA+LTEILKQLH GE+FDLW ET++WS+ LM+++YDWADV FDRWF+ESEMDAPSL E EKG VKDDG Sbjct: 25 PEYQVDELSIYNSITEPPNLKMGHFAFPCFLLSKDLKNAPVKIAVELKEK--IETSEFVSEVILQGPYVNFKLTAKAFGEYLLSDINSGEFFTRTLTNDRPKTMIEYSQPNTHKELHVGHMRNLCLGNALVHIKQYCNQDVVPVTYPGDSGTHVAKCLWYLKYHNKEAIPETGKGEWLGRMYSTANLMLEDQLGTEKEDENRAQLTEILKQLHAGSGEFFDLWTETRQWSLDLMQKTYDWADVKFDRWFFESEMDAPSLKLCQEYYEKGLFVKDDG 298
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A2H0QA93_9PROT (Arginine--tRNA ligase n=1 Tax=Bdellovibrionales bacterium CG11_big_fil_rev_8_21_14_0_20_38_13 TaxID=1973928 RepID=A0A2H0QA93_9PROT) HSP 1 Score: 329 bits (843), Expect = 2.650e-106 Identity = 157/275 (57.09%), Postives = 200/275 (72.73%), Query Frame = 1 Query: 13 VSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGLKDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESE---KGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828 ++ +E Y+ + P F+MGH AFGCF LAK +K PP +A EL D + V A GPY+NF ++ +A G V+ + +F +E++ + K MIEYSQPNTHK+LHVGHMRNLCLGNAL++M R D+ +VTYPGDVGTHVAKCLWY KK+N IPE KGAWLG++YTKA+ L++E GTD+EE NRAELT ILKQL GEYFDLW+ET+EWS+ LM+++Y WADV FDRWF+ESE+DAPSL F EL ++G+LVKDDG Sbjct: 26 LTLEEAYSAIVEPPQFEMGHFAFGCFRLAKAMKKAPPAIAAELATKIQSD--DMLKSVSAAGPYLNFIINAKAYGDLVINPVLDESFFKREILETNPKTMIEYSQPNTHKVLHVGHMRNLCLGNALIKMGRSINADIISVTYPGDVGTHVAKCLWYLKKHNNSPIPEGSPETKGAWLGQIYTKASHKLDDELGTDQEEKNRAELTAILKQLESGSGEYFDLWRETREWSLRLMEKAYSWADVKFDRWFFESEVDAPSLKFIKELFDQGKLVKDDG 298
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Match: A0A2G8HVI3_9PROT (Arginine--tRNA ligase n=1 Tax=Halobacteriovorax sp. JY17 TaxID=2014617 RepID=A0A2G8HVI3_9PROT) HSP 1 Score: 327 bits (837), Expect = 2.170e-105 Identity = 156/277 (56.32%), Postives = 206/277 (74.37%), Query Frame = 1 Query: 4 DVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAGL--KDLCPVASDVVAQGPYINFFLDKEALGMRVLGAMNRGEYFNKELILESGKWMIEYSQPNTHKILHVGHMRNLCLGNALVRMCRYAGVDMTAVTYPGDVGTHVAKCLWYFKKYNKESIPESEKGAWLGEMYTKANTLLEEERGTDKEEANRAELTEILKQLHDQKGEYFDLWKETKEWSVALMKESYDWADVTFDRWFWESEMDAPSLAFAHELLEKGQLVKDDG 828 +V +S ++IYN ++ APN KMGH AF CFPLAK K P + E +A + K + A V GPY+NF ++ + + G++F KEL+ + K MIEYSQPNTHK LHVGHMRNLCLGNALVR+ RYA ++ AVTYPGD GTHVAKCLW+ K +N+E+IPE+ KG WLG++YTKAN +LE++ GT+KE NR +LT ILK+L +KGEYFDLWKET++WS+ +M+E+Y WADV FDRWF+ESE+D+PSL A++L ++G+LVKDDG Sbjct: 26 EVALSKEQIYNLISIAPNMKMGHFAFPCFPLAKAA-KSAPNIISEKLAQSIETKGIIAAAKGV---GPYLNFTINPNTFAGSLTDEIISGKFFEKELVSDRPKTMIEYSQPNTHKELHVGHMRNLCLGNALVRIKRYADQEVVAVTYPGDSGTHVAKCLWFLKYHNQEAIPETNKGPWLGKIYTKANLMLEDQLGTEKEAKNREQLTAILKELESEKGEYFDLWKETRQWSLDMMEEAYKWADVKFDRWFFESEVDSPSLELANKLYQEGKLVKDDG 298 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10261.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10261.1.1 >prot_C-australica_Contig_10261.1.1 ID=prot_C-australica_Contig_10261.1.1|Name=mRNA_C-australica_Contig_10261.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=276bp PDVEVSFDEIYNFLTPAPNFKMGHVAFGCFPLAKICRKGPPQVAGELIAAback to top mRNA from alignment at C-australica_Contig_10261:1..828- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10261.1.1 ID=mRNA_C-australica_Contig_10261.1.1|Name=mRNA_C-australica_Contig_10261.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10261:1..828- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10261:1..828- >mRNA_C-australica_Contig_10261.1.1 ID=mRNA_C-australica_Contig_10261.1.1|Name=mRNA_C-australica_Contig_10261.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10261:1..828- (Chrysoparadoxa australica CS_1217)back to top |