mRNA_C-australica_Contig_10251.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10251.1.1
Unique NamemRNA_C-australica_Contig_10251.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Match: A0A222E3X8_9RHOB (Alanine dehydrogenase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E3X8_9RHOB)

HSP 1 Score: 526 bits (1355), Expect = 6.860e-187
Identity = 271/276 (98.19%), Postives = 274/276 (99.28%), Query Frame = 1
Query:    1 TDAGARMADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART*TIALGNATMPFMLALAD 828
            TDAGARMA+TAK+IFA+ADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGG FRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART TIALGNATMPFMLALAD
Sbjct:   51 TDAGARMAETAKEIFATADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGIFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVARTSTIALGNATMPFMLALAD 326          
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Match: A0A6F8QBA3_9RHOB (Alanine dehydrogenase n=8 Tax=Rhodobacterales TaxID=204455 RepID=A0A6F8QBA3_9RHOB)

HSP 1 Score: 482 bits (1241), Expect = 1.550e-169
Identity = 248/276 (89.86%), Postives = 260/276 (94.20%), Query Frame = 1
Query:    1 TDAGARMADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART*TIALGNATMPFMLALAD 828
            T AGAR+A+TA +IFA A+MIVKVKEPQA ERAMLREGQLLFTYLHLAPDP QTQDLLASG   IAYETVTD+RGGLPLLAPMSEVAGRLAPQ+GAWTLQKANGGRGVLMGGVPGVGPARV+VIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDD FGGTF TGYSSAGLLAEHL  ADM+IGAVLIPGA APKLVKRADF +MKPGA LVDVAIDQGGCFETS+ATTHADPIY+VDGIMHYCVANMPGAVART TIALGNATMP+MLALAD
Sbjct:   51 TAAGARLAETAAEIFAEAEMIVKVKEPQAVERAMLREGQLLFTYLHLAPDPAQTQDLLASGCIAIAYETVTDERGGLPLLAPMSEVAGRLAPQMGAWTLQKANGGRGVLMGGVPGVGPARVLVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDVFGGTFGTGYSSAGLLAEHLEQADMVIGAVLIPGAEAPKLVKRADFASMKPGAALVDVAIDQGGCFETSRATTHADPIYDVDGIMHYCVANMPGAVARTSTIALGNATMPYMLALAD 326          
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Match: A0A0T5PF60_9RHOB (Alanine dehydrogenase n=16 Tax=Proteobacteria TaxID=1224 RepID=A0A0T5PF60_9RHOB)

HSP 1 Score: 479 bits (1234), Expect = 1.800e-168
Identity = 246/276 (89.13%), Postives = 256/276 (92.75%), Query Frame = 1
Query:    1 TDAGARMADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART*TIALGNATMPFMLALAD 828
            T AGA + DTA++IFA AD+IVKVKEPQA ER MLREGQLLFTYLHLAPDP QT+DLLASG T IAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPA V+VIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAF G F+TGYSS GLL EHLT ADM+IGAVLIPGA APKLV+R  FPTMKPGA LVDVAIDQGGCFETSKATTHADPIY+VDGIMHYCVANMPGAVART TIALGNATMPFMLALAD
Sbjct:   51 TAAGANILDTAEEIFAIADLIVKVKEPQANERKMLREGQLLFTYLHLAPDPAQTKDLLASGCTAIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPANVLVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFAGVFKTGYSSTGLLEEHLTRADMVIGAVLIPGAEAPKLVRRDQFPTMKPGAALVDVAIDQGGCFETSKATTHADPIYDVDGIMHYCVANMPGAVARTSTIALGNATMPFMLALAD 326          
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Match: A0A1X7BP19_9RHOB (Alanine dehydrogenase n=5 Tax=Roseovarius TaxID=74030 RepID=A0A1X7BP19_9RHOB)

HSP 1 Score: 478 bits (1229), Expect = 1.040e-167
Identity = 246/274 (89.78%), Postives = 258/274 (94.16%), Query Frame = 1
Query:    7 AGARMADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART*TIALGNATMPFMLALAD 828
            AGA + DTA++IFA+ADMIVKVKEPQA ER MLREGQLLFTYLHLAPDPEQT+DLLASG T IAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPA VVVIGGGVVGTHAA+IAAGMGA VTVLDRSLPRLRYLDD FGGTF TGYSSAGLLAEHLT ADM+IGAVLIPGA APKLV+R  F +MKPG+VLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART TIALGNATMPFML+LA+
Sbjct:   53 AGAAIIDTAEEIFATADMIVKVKEPQAVERKMLREGQLLFTYLHLAPDPEQTKDLLASGCTAIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPAHVVVIGGGVVGTHAAKIAAGMGAKVTVLDRSLPRLRYLDDVFGGTFGTGYSSAGLLAEHLTQADMVIGAVLIPGAEAPKLVRREQFSSMKPGSVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVARTSTIALGNATMPFMLSLAN 326          
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Match: A0A1H3JK65_9RHOB (Alanine dehydrogenase n=1 Tax=Citreimonas salinaria TaxID=321339 RepID=A0A1H3JK65_9RHOB)

HSP 1 Score: 476 bits (1226), Expect = 3.080e-167
Identity = 241/274 (87.96%), Postives = 257/274 (93.80%), Query Frame = 1
Query:    7 AGARMADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART*TIALGNATMPFMLALAD 828
            AGA + DTA+++F +ADMIVKVKEPQA ERAMLREGQ+LFTYLHLAPDP QT++L+ SGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQ+GAWTLQKANGGRGVLMGGVPGVGPARV+V+GGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDD FGGTF TGYSSAGLL+EHL  ADM+IGAVLIPGA APKLV RAD   MKPGA LVDVAIDQGGCFETSKATTHADP+Y+VDGIMHYCVANMPGAVART TIALGNATMPFMLALAD
Sbjct:   53 AGAAIVDTAEEVFDTADMIVKVKEPQAAERAMLREGQILFTYLHLAPDPVQTRELMHSGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQMGAWTLQKANGGRGVLMGGVPGVGPARVLVVGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDVFGGTFGTGYSSAGLLSEHLEQADMVIGAVLIPGAEAPKLVSRADLSRMKPGAALVDVAIDQGGCFETSKATTHADPVYDVDGIMHYCVANMPGAVARTSTIALGNATMPFMLALAD 326          
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Match: UPI0010A6A9F9 (alanine dehydrogenase n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI0010A6A9F9)

HSP 1 Score: 476 bits (1225), Expect = 4.080e-167
Identity = 243/274 (88.69%), Postives = 257/274 (93.80%), Query Frame = 1
Query:    7 AGARMADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART*TIALGNATMPFMLALAD 828
            AGA + DTA++IFASADMIVKVKEPQAGER MLREGQLLFTYLHLAPDPEQT+DLLASG T IAYETVTD RGGLPLLAPMSEVAGRLAPQ+GAWTLQKANGGRGVLMGGVPGVGPARV+VIGGGVVGTHAARIAAGMGADVTVLDRSL RLRYLDD FG  FRTGYSS+GLL EHLT ADM++GAVLIPGA+APKLV+R  FP MKPGA LVDVAIDQGGCFETS+ATTHADPIY+VDGIMHYCVANMPGAVART TIALGNATMP+MLALAD
Sbjct:   53 AGATILDTAEEIFASADMIVKVKEPQAGERKMLREGQLLFTYLHLAPDPEQTRDLLASGCTAIAYETVTDARGGLPLLAPMSEVAGRLAPQMGAWTLQKANGGRGVLMGGVPGVGPARVLVIGGGVVGTHAARIAAGMGADVTVLDRSLDRLRYLDDTFGSVFRTGYSSSGLLEEHLTQADMVVGAVLIPGASAPKLVRRDHFPMMKPGAALVDVAIDQGGCFETSRATTHADPIYDVDGIMHYCVANMPGAVARTSTIALGNATMPYMLALAD 326          
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Match: A0A2M8IY12_9RHOB (Alanine dehydrogenase n=1 Tax=Pseudooceanicola lipolyticus TaxID=2029104 RepID=A0A2M8IY12_9RHOB)

HSP 1 Score: 475 bits (1222), Expect = 1.210e-166
Identity = 246/274 (89.78%), Postives = 255/274 (93.07%), Query Frame = 1
Query:    7 AGARMADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART*TIALGNATMPFMLALAD 828
            AGA++A TA +IFA+ADMIVKVKEPQA ERAMLREGQLLFTYLHLAPDPEQT DL+ASGATCIAYETVTD +GGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPA+VVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDD FG  FRTGYSSAGLLAEHL  ADM+IGAVLIPGAAAPKLV RA    MK GA LVDVAIDQGGCFETS+ATTH DPIYEVDGIMHYCVANMPGAVART TIALGNATMPFMLALAD
Sbjct:   53 AGAKIAGTASEIFAAADMIVKVKEPQAAERAMLREGQLLFTYLHLAPDPEQTHDLIASGATCIAYETVTDAQGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPAQVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDVFGRQFRTGYSSAGLLAEHLERADMVIGAVLIPGAAAPKLVSRAQLAGMKHGAALVDVAIDQGGCFETSRATTHQDPIYEVDGIMHYCVANMPGAVARTSTIALGNATMPFMLALAD 326          
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Match: A0A2N3CNH0_9PROT (Alanine dehydrogenase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-2 TaxID=2013665 RepID=A0A2N3CNH0_9PROT)

HSP 1 Score: 474 bits (1221), Expect = 1.720e-166
Identity = 243/274 (88.69%), Postives = 256/274 (93.43%), Query Frame = 1
Query:    7 AGARMADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART*TIALGNATMPFMLALAD 828
            AGA++ DTA+++FA+ADMIVKVKEPQA ER  LREGQLLFTYLHLAPDP QT+DLLASG T IAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAW LQKANGGRGVLMGGVPGVGPARV+VIGGGVVGTHAARIAAGMGA+VTVLDRSLPRLRYLDD FG  FRTGYSSAGLL EHLT ADM+IGAVLIPGAAAPKLV+RA F  MKPGAVLVDVAIDQGGCFETSKATTH DPIYEVDGI+HYCVANMPGAVART TIALGNATMP+MLALAD
Sbjct:   53 AGAKLLDTAEEVFATADMIVKVKEPQAVERKRLREGQLLFTYLHLAPDPAQTKDLLASGVTAIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWALQKANGGRGVLMGGVPGVGPARVLVIGGGVVGTHAARIAAGMGAEVTVLDRSLPRLRYLDDVFGSVFRTGYSSAGLLLEHLTQADMVIGAVLIPGAAAPKLVRRAQFAEMKPGAVLVDVAIDQGGCFETSKATTHEDPIYEVDGIVHYCVANMPGAVARTSTIALGNATMPYMLALAD 326          
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Match: A0A4R5UT92_9RHOB (Alanine dehydrogenase n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A4R5UT92_9RHOB)

HSP 1 Score: 474 bits (1220), Expect = 2.440e-166
Identity = 245/274 (89.42%), Postives = 255/274 (93.07%), Query Frame = 1
Query:    7 AGARMADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART*TIALGNATMPFMLALAD 828
            AGA +  TA++IFA+ADMIVKVKEPQ  ER MLREGQLLFTYLHLAPDPEQT+DLLASG T IAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPA+V+VIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDD FGGTF TGYSSAGLLAEHL  ADM+IGAVLIPGA APKLV+R  F  MKPGA LVDVAIDQGGCFETS+ATTHADPIYEVDGIMHYCVANMPGAVART TIALGNATMPFMLALAD
Sbjct:   53 AGATILQTAEEIFATADMIVKVKEPQPVERKMLREGQLLFTYLHLAPDPEQTRDLLASGCTAIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPAKVLVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDVFGGTFSTGYSSAGLLAEHLGEADMVIGAVLIPGAEAPKLVRRDQFAGMKPGAALVDVAIDQGGCFETSRATTHADPIYEVDGIMHYCVANMPGAVARTSTIALGNATMPFMLALAD 326          
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Match: UPI001C385D26 (alanine dehydrogenase n=1 Tax=Thalassococcus sp. CAU 1522 TaxID=2851652 RepID=UPI001C385D26)

HSP 1 Score: 474 bits (1219), Expect = 3.460e-166
Identity = 242/275 (88.00%), Postives = 257/275 (93.45%), Query Frame = 1
Query:    4 DAGARMADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGRGVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRYLDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFPTMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVART*TIALGNATMPFMLALAD 828
            DAGAR+ADTA++IFASADMIVKVKEPQA ER MLREGQ+LFTYLHLAPDP+QT+DLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVG+WTLQKANGGRGVLMGGVPGVGPA VVVIGGGVVGTHAA+IAAGMGADVT+LDRSLPRLRYLDD FG  F+  YS+AG  AE +  ADM+IGAVLIPGAAAPKL+ RA   TMKPGAVLVDVAIDQGGCFETSKATTHADP+YEVDGIMHYCVANMPGAVART TIALGNATMPFMLALAD
Sbjct:   52 DAGARLADTAQEIFASADMIVKVKEPQAVERKMLREGQVLFTYLHLAPDPDQTRDLLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGSWTLQKANGGRGVLMGGVPGVGPANVVVIGGGVVGTHAAKIAAGMGADVTILDRSLPRLRYLDDVFGRQFKNRYSTAGATAELIREADMVIGAVLIPGAAAPKLISRAQLATMKPGAVLVDVAIDQGGCFETSKATTHADPVYEVDGIMHYCVANMPGAVARTSTIALGNATMPFMLALAD 326          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10251.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E3X8_9RHOB6.860e-18798.19Alanine dehydrogenase n=3 Tax=Roseobacteraceae Tax... [more]
A0A6F8QBA3_9RHOB1.550e-16989.86Alanine dehydrogenase n=8 Tax=Rhodobacterales TaxI... [more]
A0A0T5PF60_9RHOB1.800e-16889.13Alanine dehydrogenase n=16 Tax=Proteobacteria TaxI... [more]
A0A1X7BP19_9RHOB1.040e-16789.78Alanine dehydrogenase n=5 Tax=Roseovarius TaxID=74... [more]
A0A1H3JK65_9RHOB3.080e-16787.96Alanine dehydrogenase n=1 Tax=Citreimonas salinari... [more]
UPI0010A6A9F94.080e-16788.69alanine dehydrogenase n=1 Tax=Primorskyibacter sp.... [more]
A0A2M8IY12_9RHOB1.210e-16689.78Alanine dehydrogenase n=1 Tax=Pseudooceanicola lip... [more]
A0A2N3CNH0_9PROT1.720e-16688.69Alanine dehydrogenase n=1 Tax=Alphaproteobacteria ... [more]
A0A4R5UT92_9RHOB2.440e-16689.42Alanine dehydrogenase n=2 Tax=Rhodobacteraceae Tax... [more]
UPI001C385D263.460e-16688.00alanine dehydrogenase n=1 Tax=Thalassococcus sp. C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10251contigC-australica_Contig_10251:2..829 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog314264.ROS217_10232
Preferred nameald
PFAMsAlaDh_PNT_C,AlaDh_PNT_N
Model size828
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00008
KEGG koko:K00259
KEGG ReactionR00396
KEGG Pathwayko00250,ko00430,ko01100,map00250,map00430,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.41e-157
EggNOG OGsCOG0686@1|root,COG0686@2|Bacteria,1QTX1@1224|Proteobacteria,2TQQC@28211|Alphaproteobacteria,46QJS@74030|Roseovarius
EC1.4.1.1
DescriptionBelongs to the AlaDH PNT family
Cds size759
COG categoryC
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586762.4693496-UTR-C-australica_Contig_10251:1..521682586762.4693496-UTR-C-australica_Contig_10251:1..52Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10251 2..52 -
1682586762.4919431-UTR-C-australica_Contig_10251:811..8291682586762.4919431-UTR-C-australica_Contig_10251:811..829Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10251 812..829 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586762.481972-CDS-C-australica_Contig_10251:52..8111682586762.481972-CDS-C-australica_Contig_10251:52..811Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10251 53..811 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10251.1.1prot_C-australica_Contig_10251.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10251 53..811 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10251.1.1

>prot_C-australica_Contig_10251.1.1 ID=prot_C-australica_Contig_10251.1.1|Name=mRNA_C-australica_Contig_10251.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=253bp
MADTAKDIFASADMIVKVKEPQAGERAMLREGQLLFTYLHLAPDPEQTQD
LLASGATCIAYETVTDDRGGLPLLAPMSEVAGRLAPQVGAWTLQKANGGR
GVLMGGVPGVGPARVVVIGGGVVGTHAARIAAGMGADVTVLDRSLPRLRY
LDDAFGGTFRTGYSSAGLLAEHLTLADMIIGAVLIPGAAAPKLVKRADFP
TMKPGAVLVDVAIDQGGCFETSKATTHADPIYEVDGIMHYCVANMPGAVA
RT*
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mRNA from alignment at C-australica_Contig_10251:2..829-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10251.1.1 ID=mRNA_C-australica_Contig_10251.1.1|Name=mRNA_C-australica_Contig_10251.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=828bp|location=Sequence derived from alignment at C-australica_Contig_10251:2..829- (Chrysoparadoxa australica CS_1217)
ACTGACGCTGGCGCGCGCATGGCGGATACCGCAAAGGATATCTTTGCCTC CGCCGACATGATCGTAAAGGTCAAGGAACCGCAGGCCGGCGAACGTGCTA TGTTGCGCGAGGGCCAGCTGCTTTTCACCTATCTGCATCTGGCTCCCGAT CCGGAACAGACACAGGATCTGCTGGCCTCCGGGGCCACCTGCATCGCCTA TGAAACCGTCACCGACGATCGTGGCGGCCTGCCGCTACTGGCACCGATGT CCGAGGTCGCAGGCCGTCTTGCGCCACAGGTTGGTGCATGGACATTGCAA AAGGCGAATGGCGGACGCGGCGTGCTGATGGGGGGCGTCCCAGGTGTCGG CCCGGCGCGGGTTGTGGTCATAGGCGGCGGCGTCGTCGGCACCCATGCGG CGCGCATCGCCGCCGGGATGGGCGCGGATGTAACCGTGCTGGACCGCTCC CTGCCCCGCCTGCGCTATCTTGACGATGCGTTTGGCGGCACCTTCCGAAC CGGCTATTCCAGCGCCGGTCTGCTGGCCGAGCATCTGACACTGGCTGATA TGATCATCGGCGCGGTGCTGATCCCCGGAGCAGCCGCCCCGAAACTGGTC AAACGTGCCGATTTCCCAACCATGAAACCGGGGGCGGTTCTGGTGGATGT GGCCATTGACCAGGGGGGGTGTTTCGAGACCTCAAAGGCAACCACGCATG CCGACCCGATCTATGAGGTGGATGGGATCATGCACTATTGCGTGGCCAAC ATGCCGGGTGCCGTTGCGCGGACCTAGACCATCGCGCTGGGCAATGCGAC CATGCCGTTCATGCTGGCGCTAGCCGAC
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Coding sequence (CDS) from alignment at C-australica_Contig_10251:2..829-

>mRNA_C-australica_Contig_10251.1.1 ID=mRNA_C-australica_Contig_10251.1.1|Name=mRNA_C-australica_Contig_10251.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=759bp|location=Sequence derived from alignment at C-australica_Contig_10251:2..829- (Chrysoparadoxa australica CS_1217)
ATGGCGGATACCGCAAAGGATATCTTTGCCTCCGCCGACATGATCGTAAA
GGTCAAGGAACCGCAGGCCGGCGAACGTGCTATGTTGCGCGAGGGCCAGC
TGCTTTTCACCTATCTGCATCTGGCTCCCGATCCGGAACAGACACAGGAT
CTGCTGGCCTCCGGGGCCACCTGCATCGCCTATGAAACCGTCACCGACGA
TCGTGGCGGCCTGCCGCTACTGGCACCGATGTCCGAGGTCGCAGGCCGTC
TTGCGCCACAGGTTGGTGCATGGACATTGCAAAAGGCGAATGGCGGACGC
GGCGTGCTGATGGGGGGCGTCCCAGGTGTCGGCCCGGCGCGGGTTGTGGT
CATAGGCGGCGGCGTCGTCGGCACCCATGCGGCGCGCATCGCCGCCGGGA
TGGGCGCGGATGTAACCGTGCTGGACCGCTCCCTGCCCCGCCTGCGCTAT
CTTGACGATGCGTTTGGCGGCACCTTCCGAACCGGCTATTCCAGCGCCGG
TCTGCTGGCCGAGCATCTGACACTGGCTGATATGATCATCGGCGCGGTGC
TGATCCCCGGAGCAGCCGCCCCGAAACTGGTCAAACGTGCCGATTTCCCA
ACCATGAAACCGGGGGCGGTTCTGGTGGATGTGGCCATTGACCAGGGGGG
GTGTTTCGAGACCTCAAAGGCAACCACGCATGCCGACCCGATCTATGAGG
TGGATGGGATCATGCACTATTGCGTGGCCAACATGCCGGGTGCCGTTGCG
CGGACCTAG
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