mRNA_C-australica_Contig_1025.4.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1025.4.1
Unique NamemRNA_C-australica_Contig_1025.4.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Match: D7G568_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G568_ECTSI)

HSP 1 Score: 308 bits (790), Expect = 1.780e-96
Identity = 150/322 (46.58%), Postives = 210/322 (65.22%), Query Frame = 2
Query:  419 WDYQTKWDPAGIIKKTEWSSEAYKPPEGVCEARVEKEYADGAELLQGIELWGSPNKQEPKILCLIYTYHENHDN-VKAIRGTWASRCNGMLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWFLIAGDDTYFLMENLRKYLLSKEITAAS----EKGLLPMYLGRGL--KNDAGMHFNAGGPGYILNQKALTVLKQNMYDERCQPHASRRQEDVQVAKCLALSFVFPYDTRDALGRERFHPFSPGTHFGYRIPPHHETYPDSRDWYRRFSFFSLKEGRDCCAPDSISFHYIDADMMPWLHHQLYTC 1363
            W+YQ K+DP    + ++W+   Y  PEGVC+     +     +L+  +++WG   K  P+I C +YTYH NHD  +KAI+ TWASRC+G + FSDQ D  +P+ KI HEG E++ NMWQK RAIWKY+   Y +D++WF++ GDD + ++ENLRKYLLS +I  A+    + G +PMYLGR    K +    FN+GG  Y+LNQK++ +L  ++ D  C PH     EDV VA CL    V  +DTRD LGRERFHPF+PG H  YR+P   +T P+ +DWY  +S   LK GR+CC+  S+SFHY+D ++M  L+H +Y+C
Sbjct:   69 WNYQQKFDPNHFFRSSQWAPTLYALPEGVCDLNDSHK-----QLIAQVDVWGGAAKTAPRIFCGVYTYHANHDTKIKAIKETWASRCDGFVAFSDQVDLAVPSFKIKHEGPEEWDNMWQKSRAIWKYIDRHYINDFDWFVLGGDDIFLIVENLRKYLLSDDIKKAAGGFKDGGSVPMYLGRRFRPKGNNDRIFNSGGAAYLLNQKSVRLLASHLDDPSCHPHQQCSWEDVNVAACLRQHGVVAHDTRDGLGRERFHPFTPGQHLMYRVP---KTNPE-KDWYVDYSI-DLKIGRECCSRYSLSFHYVDENLMRRLYHLVYSC 380          
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Match: A0A7S2V9L2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V9L2_9STRA)

HSP 1 Score: 287 bits (734), Expect = 5.790e-90
Identity = 136/266 (51.13%), Postives = 179/266 (67.29%), Query Frame = 2
Query:  569 WGSPNKQEPKILCLIYTYHENHDN-VKAIRGTWASRCNGMLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWFLIAGDDTYFLMENLRKYLLSKEITAASEKGLLPMYLGRGLKNDAGMHFNAGGPGYILNQKALTVLKQNMYDERCQPHASRRQEDVQVAKCLALSFVFPYDTRDALGRERFHPFSPGTHFGYRIPPHHETYPDSRDWYRRFSFFSLKEGRDCCAPDSISFHYIDADMMPWLHHQLYTC 1363
            W    K EPKILC+ YT  + H   VKA + TWASRC+G +V SD DD  +P+ K+ H+G E+Y N+WQK+RA WKYV++ YRD+++WF + GDDTY ++ENLRKYLLS+EI  A + G LP+YLGR  K   G  FN+GG G++LN++AL +L  ++  + C P+     EDVQVAKCL    V+PYDTRD  GRERF PF+PG H+ YR+PP         DWY  ++   LK G DCC+ ++ISFHYI  D M  +H  LY C
Sbjct:    5 WPKGVKTEPKILCITYTISKYHKTKVKAQKHTWASRCDGFIVISDTDDFVVPSVKVPHQGPEEYNNIWQKVRAAWKYVYYHYRDEFDWFYMGGDDTYVIVENLRKYLLSQEIQQAHKHGKLPLYLGRRFKPKDGNIFNSGGAGHVLNRRALEILTLSLDSQFCNPNLKGFWEDVQVAKCLRHHGVYPYDTRDDWGRERFLPFAPGHHYKYRVPP-------KPDWYANYAI-GLKTGEDCCSHEAISFHYIQPDKMRKIHAHLYYC 262          
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Match: D7FK31_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK31_ECTSI)

HSP 1 Score: 281 bits (720), Expect = 1.070e-85
Identity = 147/332 (44.28%), Postives = 200/332 (60.24%), Query Frame = 2
Query:  413 DTWDYQTKWDPAGIIKKTEWSSEAYKPPEGVCEARVEKEYADGAELLQGIELWGSPNKQEPKILCLIYTYHENH-DNVKAIRGTWASRCNGMLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWFLIAGDDTYFLMENLRKYLLSKEITAAS----EKGLLPMYLGRGLKNDAGMH--FNAGGPGYILNQKALTVLKQNMYDERCQPHASRRQEDVQVAKCLALSFVFPYDTRDALGRERFHPFSPGTHFGYRIPPHHETYPDSR--------DWYRRFSFFSLKEGRDCCAPDSISFHYIDADMMPWLHHQLYTC 1363
            + WDYQ K+D     K TE SS ++   E   E  +     D  +LL  +++W       P++ C IYT+  NH   V AI+ TWA  C+G + FSD  D  I + KI HEG E+Y NMWQK RAIWKY++  Y+DD++WF++ GDD + +MENLRKYLLS EI  A+      G  PM+LGR L+     H  +N GG  Y++NQ ++ +L  ++ D +CQPH  +  EDV V++CL ++ V  +DTRD LGRERFHPFSP  H GYR+P   ET P+ R         WY       L+ G +CC+ DSISFHYID  +M  L+H +Y+C
Sbjct:   90 EPWDYQKKFDTTNFFKFTEASSFSWVDEEPAEECDIND---DHKKLLAQVDVWEDAVTNSPRVFCGIYTHQNNHATKVMAIKETWARHCDGFVAFSDVADDAILSFKIKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIMENLRKYLLSDEIIRAAGGLQNGGTNPMFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSQCQPHTKQSWEDVLVSRCLKVNGVMAFDTRDDLGRERFHPFSPAVHIGYRMP---ET-PEDRLVSGFLVGGWYG-IQAIELQFGLECCSQDSISFHYIDEQLMRRLYHLVYSC 413          
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Match: D7FTE6_ECTSI (WSC domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTE6_ECTSI)

HSP 1 Score: 280 bits (716), Expect = 3.750e-84
Identity = 146/327 (44.65%), Postives = 193/327 (59.02%), Query Frame = 2
Query:  419 WDYQTKWDPAGIIKKTEWSSEAYKPP-EGVCEARVEKEYADGAELLQGIELWGSPNKQEPKILCLIYTYHENH-DNVKAIRGTWASRCNGMLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWFLIAGDDTYFLMENLRKYLLSKEITAAS----EKGLLPMYLGRGLKN--DAGMHFNAGGPGYILNQKALTVLKQNMYDERCQPHASRRQEDVQVAKCLALSFVFPYDTRDALGRERFHPFSPGTHFGYRIPPHHET--YPDSR--DWYRRFSFFSLKEGRDCCAPDSISFHYIDADMMPWLHHQLYTC 1363
            WD+Q K+DP          S ++           VE    D  +LL    +W    K  P++ C IYT+  NH   VKAI+ TWAS C+G + FSD  D  + T  I HEG E+Y NMWQK RAIWKY++  Y+DD++WF++ GDD + ++ENLRKYLLS+E+  A+      G  P+YLGR L+   D    +N GG  Y+LNQ ++ +L  ++ D+ CQPH  +  EDV +  CL  + V P+DTRD LGRERFHPF+PG HFGYR PP  E    P  +   WY       LK GR+CC+ DSISFHY+D  +M  LH  LY C
Sbjct:  168 WDFQEKFDPVNFFFSDRGDSSSFSNHVRNGSSCDVED---DHKKLLDQTHVWQGARKTTPRVFCGIYTHQNNHATKVKAIKETWASHCDGFVAFSDAADLELQTFMIKHEGPEEYTNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFIIVENLRKYLLSEEVKRAAGGLENGGTTPVYLGRRLRGFGDDNRIYNNGGASYVLNQASVGLLADHLDDDDCQPHTKKPWEDVLIGSCLKKNGVEPFDTRDNLGRERFHPFTPGAHFGYRKPPKLENRHVPGCKVGAWYL-IQAIDLKFGRECCSDDSISFHYVDEQLMRRLHDLLYLC 490          
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Match: A0A7S2SPK1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SPK1_9STRA)

HSP 1 Score: 273 bits (698), Expect = 4.170e-83
Identity = 132/297 (44.44%), Postives = 192/297 (64.65%), Query Frame = 2
Query:  488 KPPEGVCEAR-VEKEYAD-GAELLQGIELWGSPNKQEPKILCLIYTYHENHDNVKA-IRGTWASRCNGMLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWFLIAGDDTYFLMENLRKYLLSKEITAASEKGLLPMYLGRGLKNDAGMHFNAGGPGYILNQKALTVLKQNMYDERCQPHASRRQEDVQVAKCLALSFVFPYDTRDALGRERFHPFSPGTHFGYRIPPHHETYPDSRDWYRRFSF-FSLKEGRDCCAPDSISFHYIDADMMPWLHHQLYTCR 1366
            K P   C+AR +    AD   +LL  I++  +PN+    + C+IYT   NH    + +R TWASRC+G +V SD +D T+P  ++ HEG+E+Y N+WQK+R+IWKYVH  YR++++WF+I GDD + +  NLR Y+ S+ +  ASE G  PM+LGR  +   G  FN+GG GY+LN++AL +L  N+ ++RC+PH     EDV VA CL ++ V  +DTRD+ G ERFHPF+PG H  +R P        S DWY  ++  + LK G DCC+P+S++FHY+  D+MP +   L+ CR
Sbjct:   67 KQPADQCKARGLRGGAADPNKKLLDRIQV-SAPNEDGHTLFCMIYTISRNHKTAASTVRDTWASRCDGFVVMSDAEDPTLPAARVTHEGKEEYNNIWQKVRSIWKYVHAAYREEFDWFVIGGDDLFVVPSNLRAYVTSEAVQRASEGGKKPMFLGRRFQIPKGQLFNSGGAGYVLNREALDLLVDNLDNQRCRPHQHVFAEDVNVAHCLEVNGVQAFDTRDSNGGERFHPFTPGQHLLWRPPAKRRPDGSSPDWYENYNAPWGLKLGEDCCSPESVAFHYVKPDLMPHMSALLFDCR 362          
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Match: D7FK30_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK30_ECTSI)

HSP 1 Score: 267 bits (682), Expect = 5.050e-81
Identity = 135/286 (47.20%), Postives = 180/286 (62.94%), Query Frame = 2
Query:  536 DGAELLQGIELWGSPNKQEPKILCLIYTYHENH-DNVKAIRGTWASRCNGMLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWFLIAGDDTYFLMENLRKYLLSKEITAAS----EKGLLPMYLGRGLKN-DAGMHFNAGGPGYILNQKALTVLKQNMYDERCQPHASRRQEDVQVAKCLALSFVFPYDTRDALGRERFHPFSPGTHFGYRIPPHHETYPDSR----DWYRRFSFFSLKEGRDCCAPDSISFHYIDADMMPWLHHQLYTC 1363
            D  +LL  I++W    +  P+I C IYT+  NH   VKA++ TWAS C+G + FSD  D  + T KI HEG E+Y NMWQK RAIWKY++  Y+DD++WF++ GDD + ++ENLRKYLLS EI  A+      G  PMYLGR  +       +N GGP Y+LNQ ++ +L  ++ D+ CQPHA++  ED+ VA CL  + V  +DTRDALGRERFHPF+P  HFGYR+P   E    S      WY       LK GR+CC+ DS+SFHY+   +   LH  +Y C
Sbjct:   53 DHKKLLAQIDVWEGAEEGAPRIFCGIYTHENNHATKVKAVKETWASHCDGFVAFSDVTDLELHTFKIKHEGPEEYSNMWQKARAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKYLLSDEIKGAAGGLENGGPNPMYLGRRFRFIGEDRIYNNGGPSYVLNQASVGLLASHLDDDACQPHAAKHWEDILVAWCLKKNGVEAFDTRDALGRERFHPFTPAAHFGYRMPQKLEDRLVSGCVVGAWYI-IQGIDLKFGRECCSQDSLSFHYVGEQVSRRLHDLIYAC 337          
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Match: D7FK28_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK28_ECTSI)

HSP 1 Score: 270 bits (690), Expect = 2.130e-80
Identity = 143/331 (43.20%), Postives = 201/331 (60.73%), Query Frame = 2
Query:  416 TWDYQTKWDPAGIIKKTEWSSEAYKPPEGVCEARVEKEYADGAELLQGIELWGSPNKQEPKILCLIYTYHENH-DNVKAIRGTWASRCNGMLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWFLIAGDDTYFLMENLRKYLLSKEITAASEKGLL----PMYLGRGLK--NDAGMHFNAGGPGYILNQKALTVLKQNMYDERCQPHASRRQEDVQVAKCLALSFVFPYDTRDALGRERFHPFSPGTHFGYRIPPHHETYPDSR--------DWYRRFSFFSLKEGRDCCAPDSISFHYIDADMMPWLHHQLYTC 1363
            +W+ Q K+D   I   T++S+ +     G   AR      D  ++L  +++W   +K  P+I C I+T+ +NH   VKAI+ TWA  C+G + FSD  D  + T +I HEG E+Y NMWQK RAIWKY++  Y++D++WFL+ GDD + ++ENLRKYLLS EI  A+  G+     PMYLGR L+  ND    FN+GG  Y+LNQ ++ +L   + ++ CQPH     EDV VA CL  + V  +DTRDA GRERFHP++P  HFGYR P      P+ R        DWY   +   L  G + C+ DS+SFHY+D D+M  L+H +Y+C
Sbjct:  142 SWNDQDKFDTKKIFLPTQYSTSSLS---GDSSARACAMNDDHKKMLTHVDVWEGASKTMPRIFCGIFTHRKNHFTKVKAIKETWAVNCDGFVAFSDAADPDLHTFQIEHEGPEEYGNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDEIMHAAGGGINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVGLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDASGRERFHPYTPAVHFGYRTPMR----PEDRLVSGIVVGDWYIGMAI-DLIFGLEGCSSDSLSFHYVDEDLMRRLYHLVYSC 464          
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Match: A0A6H5JMC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMC5_9PHAE)

HSP 1 Score: 266 bits (680), Expect = 9.610e-80
Identity = 139/331 (41.99%), Postives = 200/331 (60.42%), Query Frame = 2
Query:  416 TWDYQTKWDPAGIIKKTEWSSEAYKPPEGVCEARVEKEYADGAELLQGIELWGSPNKQEPKILCLIYTYHENH-DNVKAIRGTWASRCNGMLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWFLIAGDDTYFLMENLRKYLLSKEITAAS----EKGLLPMYLGRGLK--NDAGMHFNAGGPGYILNQKALTVLKQNMYDERCQPHASRRQEDVQVAKCLALSFVFPYDTRDALGRERFHPFSPGTHFGYRIPPHHETYPDSR--------DWYRRFSFFSLKEGRDCCAPDSISFHYIDADMMPWLHHQLYTC 1363
            +W+ Q K+D    +  T+ S+ +     G   ++      D  E+L  +++W   +K  P+I C I+T+ +NH   VKAI+ TWA+ C+G + FSD  D  + T +I HEG E+Y NMWQK RAIWKY++  Y++D++WFL+ GDD + ++ENLRKYLLS +I  A+      G  PMYLGR L+  ND    FN+GG  Y+LNQ ++ +L   + ++ CQPH     EDV VA CL  + V  +DTRD  GRERFHP++P  HFGYR+P      P+ R        DWY   +   L  G + C+ DS+SFHY+D D+M  L+H +Y+C
Sbjct:   90 SWNDQDKFDTRKFLLPTQHSTPSLS---GNSSSKACGTNDDHKEMLSHVDVWEGASKTMPRIFCGIFTHKKNHFTKVKAIKETWAANCDGFVAFSDAADPDLHTFQIEHEGPEEYDNMWQKSRAIWKYINFHYKNDFDWFLLGGDDLFVIVENLRKYLLSDDIMRAAGGRINGGPNPMYLGRRLRPFNDDEWIFNSGGASYVLNQASVRLLASYLDEDACQPHKKTSWEDVMVAMCLKKNGVVAFDTRDESGRERFHPYTPAVHFGYRMPMR----PEDRFVSGIVVGDWYISMAI-DLVFGLEGCSSDSLSFHYVDEDLMRRLYHLVYSC 412          
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Match: A0A6H5JVG9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JVG9_9PHAE)

HSP 1 Score: 265 bits (676), Expect = 4.210e-79
Identity = 147/345 (42.61%), Postives = 201/345 (58.26%), Query Frame = 2
Query:  413 DTWDYQTKWDPAGIIKKTEWSSEAYKPPEGVCEARVEKEYADGAELLQGIELWGSPNKQEPKILCLIYTYHENH-DNVKAIRGTWASRCNGMLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWFLIAGDDTYFLMENLRK-YLLSKEITAAS----EKGLLPMYLGRGLKNDAGMH--FNAGGPGYILNQKALTVLKQNMYDERCQPHASRRQEDV------------QVAKCLALSFVFPYDTRDALGRERFHPFSPGTHFGYRIPPHHETYPDSR--------DWYRRFSFFSLKEGRDCCAPDSISFHYIDADMMPWLHHQLYTC 1363
            + WDYQ K+D     K TE SS ++   E   E  +     D  +LL  +++W       P++ C IYT+H+NH   V AI+ TWA  C+G + FSD  D  I +  I HEG E+Y NMWQK RAIWKY++  Y+DD++WF++ GDD + ++ENLRK YLLS EI  A+      G  P++LGR L+     H  +N GG  Y++NQ ++ +L  ++ D RCQPHA +  EDV            +V++CL  + V  +DTRD LGRERFHPFSP  H GYR+P   ET P+ R         WY       L  G +CC+ DSISFHYID  +M  L+H +Y+C
Sbjct:   85 EPWDYQEKFDTTNFFKFTEDSSFSWVDEEPAEECDIND---DHKKLLAQVDVWEDAVTNSPRVFCGIYTHHKNHATKVMAIKETWARHCDGFVAFSDVADDAILS--IKHEGPEEYSNMWQKSRAIWKYINFHYKDDFDWFVLGGDDLFLIVENLRKVYLLSDEIIRAAGGLQNGGTNPIFLGRRLQRFGEQHRIYNNGGASYVMNQASVGLLGNHLDDSRCQPHAKQSWEDVLVSISRASFKKTEVSRCLRNNGVMAFDTRDGLGRERFHPFSPAVHIGYRMP---ET-PEDRLVSGFLVGGWYG-IQAIELTFGLECCSQDSISFHYIDEQLMRRLYHLVYSC 419          
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Match: A0A7S2MS53_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MS53_9STRA)

HSP 1 Score: 259 bits (663), Expect = 1.570e-77
Identity = 122/261 (46.74%), Postives = 166/261 (63.60%), Query Frame = 2
Query:  599 ILCLIYTYHENHDNVKAIRGTWASRCNGMLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWFLIAGDDTYFLMENLRKYLLSKEITAASEKGL---LPMYLGRGLKNDAGMHFNAGGPGYILNQKALTVLKQNMYDERCQPHASRRQEDVQVAKCLALSFVFPYDTRDAL-GRERFHPFSPGTHFGYRIPPHHETYPDSRDWYRRFSF-FSLKEGRDCCAPDSISFHYIDADMMPWLHHQLYTCR 1366
            ++C++YTYH  HD V  +R TW SRC+G +V SDQ D ++   ++ HEG+E+Y N+WQK+R+IWKYVH  YRD ++WF+I GDD + +  NLR YL S ++ AA+  GL    P++LGR  +   G  FN+GG GY+LN+ AL VL  +M D +C PH     EDV VA CL +  V P DTR A  G ERFHPF+PG H  +R P        S+DWY  ++  + L  G  CCA DS++FHY+   +MP +   LY CR
Sbjct:  142 LMCIVYTYHAKHDRVAMVRDTWGSRCDGFVVMSDQSDASVSAARVTHEGKEEYSNIWQKVRSIWKYVHLHYRDQFDWFIIGGDDLFVIPSNLRAYLRSDQVVAAAG-GLDQSEPVFLGRRFQIPRGQLFNSGGAGYVLNRAALEVLNSHMSDAKCFPHQHVFAEDVNVAHCLKIHGVKPIDTRQAFTGAERFHPFTPGGHLNWRPPKIKNADGSSKDWYENYNKPWGLTLGEKCCANDSVTFHYVSPQLMPHMSALLYDCR 401          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1025.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G568_ECTSI1.780e-9646.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2V9L2_9STRA5.790e-9051.13Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
D7FK31_ECTSI1.070e-8544.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FTE6_ECTSI3.750e-8444.65WSC domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7S2SPK1_9STRA4.170e-8344.44Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
D7FK30_ECTSI5.050e-8147.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7FK28_ECTSI2.130e-8043.20Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMC5_9PHAE9.610e-8041.99Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JVG9_9PHAE4.210e-7942.61Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2MS53_9STRA1.570e-7746.74Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1025contigC-australica_Contig_1025:7010..10905 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FTE6
PFAMsFringe
Model size1714
Max annot lvl2759|Eukaryota
KEGG koko:K00731
KEGG ReactionR05908
KEGG Pathwayko00512,ko01100,map00512,map01100
KEGG ModuleM00056
Hectar predicted targeting categoryother localisation
Exons14
Evalue9.55e-71
EggNOG OGsKOG2246@1|root,KOG2246@2759|Eukaryota
EC2.4.1.122
Descriptionglycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity
Cds size720
COG categoryS
CAZyGT31
BRITEko00000,ko00001,ko00002,ko01000,ko01003
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1025.4.1prot_C-australica_Contig_1025.4.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1025 7322..9325 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586762.190566-UTR-C-australica_Contig_1025:7009..73211682586762.190566-UTR-C-australica_Contig_1025:7009..7321Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1025 7010..7321 -
1682586762.292268-UTR-C-australica_Contig_1025:9325..93351682586762.292268-UTR-C-australica_Contig_1025:9325..9335Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1025 9326..9335 -
1682586762.3014023-UTR-C-australica_Contig_1025:9448..95641682586762.3014023-UTR-C-australica_Contig_1025:9448..9564Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1025 9449..9564 -
1682586762.310854-UTR-C-australica_Contig_1025:9832..99581682586762.310854-UTR-C-australica_Contig_1025:9832..9958Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1025 9833..9958 -
1682586762.3208861-UTR-C-australica_Contig_1025:10069..103261682586762.3208861-UTR-C-australica_Contig_1025:10069..10326Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1025 10070..10326 -
1682586762.3319254-UTR-C-australica_Contig_1025:10653..107141682586762.3319254-UTR-C-australica_Contig_1025:10653..10714Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1025 10654..10714 -
1682586762.3444154-UTR-C-australica_Contig_1025:10793..109051682586762.3444154-UTR-C-australica_Contig_1025:10793..10905Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1025 10794..10905 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586762.20345-CDS-C-australica_Contig_1025:7321..74971682586762.20345-CDS-C-australica_Contig_1025:7321..7497Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1025 7322..7497 -
1682586762.213342-CDS-C-australica_Contig_1025:7584..76581682586762.213342-CDS-C-australica_Contig_1025:7584..7658Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1025 7585..7658 -
1682586762.2242234-CDS-C-australica_Contig_1025:7767..78291682586762.2242234-CDS-C-australica_Contig_1025:7767..7829Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1025 7768..7829 -
1682586762.234009-CDS-C-australica_Contig_1025:7936..79871682586762.234009-CDS-C-australica_Contig_1025:7936..7987Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1025 7937..7987 -
1682586762.2438064-CDS-C-australica_Contig_1025:8144..82001682586762.2438064-CDS-C-australica_Contig_1025:8144..8200Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1025 8145..8200 -
1682586762.253459-CDS-C-australica_Contig_1025:8299..83661682586762.253459-CDS-C-australica_Contig_1025:8299..8366Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1025 8300..8366 -
1682586762.267034-CDS-C-australica_Contig_1025:8736..88391682586762.267034-CDS-C-australica_Contig_1025:8736..8839Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1025 8737..8839 -
1682586762.275377-CDS-C-australica_Contig_1025:8996..90581682586762.275377-CDS-C-australica_Contig_1025:8996..9058Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1025 8997..9058 -
1682586762.2837622-CDS-C-australica_Contig_1025:9256..93251682586762.2837622-CDS-C-australica_Contig_1025:9256..9325Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1025 9257..9325 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1025.4.1

>prot_C-australica_Contig_1025.4.1 ID=prot_C-australica_Contig_1025.4.1|Name=mRNA_C-australica_Contig_1025.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=240bp
MLVFSDQDDGTIPTHKINHEGEEDYKNMWQKIRAIWKYVHHWYRDDYEWF
LIAGDDTYFLMENLRKYLLSKEITAASEKGLLPMYLGRGLKNDAGMHFNA
GGPGYILNQKALTVLKQNMYDERCQPHASRRQEDVQVAKCLALSFVFPYD
TRDALGRERFHPFSPGTHFGYRIPPHHETYPDSRDWYRRFSFFSLKEGRD
CCAPDSISFHYIDADMMPWLHHQLYTCRISNKLEGVKYT*
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mRNA from alignment at C-australica_Contig_1025:7010..10905-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1025.4.1 ID=mRNA_C-australica_Contig_1025.4.1|Name=mRNA_C-australica_Contig_1025.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3896bp|location=Sequence derived from alignment at C-australica_Contig_1025:7010..10905- (Chrysoparadoxa australica CS_1217)
CTGGTATCTGAGCCATAACAGGCTAGCGGTCACCGTGAGCGATGCCACAG TGTTCGCACAAGAGGAGCAGGGGGAGGTGCGCAAAGTATTGCAGCTACTG GACAGGTCTAAGGTGAGAGATCTGCAACAGGTGCAACTCTTCCTCATGTT CACTATCTCTCTGTCAACCCTTCGGTCTTTTGCAACGCTAGCTTGCCAAC AAAGACGGACAAGAGAGGGGCAAGGCACAGTACCCCAAGGTCAATGATAT TGGTGAGTCGTGACAATGTTACAAGGCTCATGGGGCAGGAACTCAAGGGG TTGCATCGCAGTCCCAATGATGATGAGACAAGAGTTTGGTTAGGGAAAGG CTTGTCCCTTTTGGTGCGAGGTTTTGTGTAGCCGTGCCCAGCTCTTGTCT ATGGTCTATGTGGCCAAATGGCAGGGCCAAGAGTTGCAGACCTGATGTTT CGCCTTAGGTTGGCAGCTTGGATAGGATGGATCGGGTCAGTGAGGTGGTC CATCAAGAGCTCACTTGAGGGCTTCAACATGTGTTTCCCTTTTTCCTCCA GTAATCTCGGACTCTCTCTGATCACTCAGGTCAGAGCTCAGGAGCTGATG ATGGCGTAGGCCAGCATAAGGATAAGCTGAAAGACAGCAAGAAGACAGAG GATACGCTGGAAGATAGCAAGAAGAGCGAGAACGAGGACTTGCTTGGCAA TGGGCAGGTATCAGGGCTGGTGGAAGAAGTGGAGAAGAAGAAACCACCGG ACCTGACAGAGATTTTGGCTAAGGAGAAGGCCGCTGCAGTTGCTGCAGCT GCTGCAGCTGCTGCGCCTGACACATGGGATTACCAGGTCACCTCACTGCT GCTACTCACCATGTCACCCATCCACGCTAGTTGAATACCTCCCACACACT AACTCAGTCAGTTATCACTCGCATAACATACACAGCTTATCCTACAGACA AAGTGGGACCCTGCTGGCATCATCAAGAAAACGGAGTGGAGCTCGGAAGC GTATAAACCGCCCGAAGGAGTGTGCGAGGCAAGGGTAGAGAAGGAGTATG CAGATGGTGCAGAGCTGCTGCAGGTGAGTTGGCTGAGTGAATGGTAGAGC AAATGGCTGAGTGAATGGCTGAGTGACCGACTGACCTGGCCCGTGGATAT TGATGGCTCACGGCACTTGACTGGCTCTTCTGTGTGAAGTTGCTGCGCGT GAGAAGCAAATTTATAGTATGTTCAGAGTCTGGTGCGATGAGCTGCTGAG AGGAGGCAGTCCTTGTGGACAACCTGATCCGTAGGTCTAACCTGAAGGAA GTAATGTAGTAAAACATCTTGCTATGACCCGACCTTCTCAGGGGATTGAG CTCTGGGGATCTCCAAACAAGCAGGAGCCGAAGATTCTGTGCCTGATCTA CACGTACCATGAAAACCATGACAATGTCAAAGCCATCAGAGGGACCTGGG CCTCTAGGTAAGCTTGGGGCTGAGATGAGGGGGAGCAATGCCGAGTGACA GGGAACATAATTACTGGCACTGCTGGCATACGATTAGACTTTGTCAGAGC TGACCCATCCCATGCCCCAGGTGCAATGGCATGCTCGTGTTTAGCGACCA AGACGACGGCACCATCCCAACCCACAAAATAAATCACGAGGGAGAAGAGG TAAAGGGTACTGTCTCTTCTGGCTGGGTTCCAGCAGGCTCCTTGCCAGCT CCATCATGTATTGCCAGTCCTTGGTCTGGGGAAGTAGCTTGGGCATGCTG TAATTATCCACATGAATTGCTCATGCTACTCATCAGCTCAAGTCACTTAG TCACTCGTATGCTTCGGATCTTAATCTACCTGAGGTCACCCTTCCAGGAC TACAAAAATATGTGGCAGAAGATCCGTGCAATTTGGAAGTATGTGCATCA TTGGTACAGGTGAGTGACTGATTGAGTTAGTGAATGAATGGGCCTATGAC GTGGCGTTGCTATGGTGATGCAGGTGTTGGGGCTTTTGCTGTGAGTGAAG GTTGCAGCCGACAGCCGACAGAGCAGGCCCTCCCTCTGACGCCGCTGGTT GATCTATCTTTTGCAGGGACGATTATGAGTGGTTTCTGATTGCCGGTGAC GACACTTACTTCCTCATGGAAAACCTCAGAAAGTACCTCTTGTCCAAGGA GATAACAGCAGCGTCTGAGGTGAGCTGCTGATTATTATTCGGGGAAATAA TAACAGTCTCGCGTGACTCTTATTTGGAACCCACTCATTGATGCATTAAC CCACATCTGAACTATGGTAATGCACTTTGATGCATTGTACCACGACTACC TCCCTTTCCCTGATGCATTACAATCCACACTCTGAGAACTCACTCTGTCA CGCACTCCTTAGCCCTCTGAGAACTAGCGTGGCCAGTGATGCAAAGTATA CCCACACCTCTCATGCGTTGTGCTCATTTGACATTAGTTACCTTCTCAGT CCTCTGAGAACTAGCCAAATCACTGATGTAAGCTCGTGATTCCCCTTGGC TATGCACTGTGCTCTGGCCTTCTGGCCAAAATGCATCAGAAGGGGCTACT TCCCATGTACCTGGGCAGGGGATTGAAAAACGATGCTGGGATGCACTTTA ACGCAGGTGAGTGGGATAGTGGGTGAATGAGTGAGCCAATGTTCAGAAAC TAGTGCTTCCTTAATAGAGTATCTTAGCTACCTGATGCTGATGCTGATGC TGTAGGTGGGCCAGGCTACATACTGAATCAGAAGGCCTTGACGGTGCTGA AACAGAACATGGTAAGAGAGCATACTGTTTAACTGCTTTTGCTTTGTGTG TACCTCAGTGGGACCAGCTCACTTGATCCATGCTTGGACCATTGGCGGTC TAGCCCTGGCCAGCCCCGTTGTGCACTCGCTCGTCCTGAACTGACAGCTG ACAAAAGACAACTGGCAGTATGATGAACGCTGCCAGCCTCATGCAAGCAG ACGGCAAGAGGATGTGCAGGTATTGGGGTGCTGGATCAGACACGCCTCAA CATATACCCCACCCCACCGGACTTATCATTAGCTACTTCTATCATCCTTG GCTAGCTCTGACTCATCGCACCTCAGGTGGCAAAGTGCTTGGCGCTAAGT TTTGTGTTCCCATATGACACACGTGACGCTTTGGGCAGGTGATTCTAACT CAGCAACTCTGCAACTCTCTAGCGGGCCCCTTCACCTGATGATGCGCATG GAGCACTAACCTGTCTCCTGGTTTGCTTGTTTTTGCTTGTACAAAAGGGA GAGGTTCCACCCCTTTTCTCCGGGCACGCACTTTGGCTATAGAATACCTC CCCATCATGAAACATACCCTGGTAAAGCACCCTAAGCAGTACCAGACTTA AGGGCAGCACTCTGAAGCCTCTCACTCACCACTTCCCTCCACCTTGCTCC TAAACCAGACTCACGGGACTGGTACCGCAGGTTCAGTTTTTTTTCCCTCA AAGAGGGCCGTGACTGCTGTGCCCCAGACAGCATTAGCTTCCATTATATC GATGCCGACATGATGCCGTGGCTACACCACCAGCTTTACACGTGCCGGAT AAGCAACAAACTGGAGGGGGTGAAATATACATGAGAGCACACGCAGGCCG TGCGATGGAACCCTCTGCTTGCTCAGGTTCCCTGTGAAGCAGGTACTAGA AGTGACAGCACGTGAACAATGGCCCTATGGAGATGGGTGTTATGCAAGCT GTCGTTGGTGGTAGTGGTGGGGTGTGGGGAGGCTCAAAGATGTTGGTGCA GGCTCCATTCTTGGGGGAGAGCTGATGGCAGTAGATGAATAGGACCAAGC CCAAGTTGTAAGTCTTGCATGCATGATCTACGAGAATCCTCAGTACGAGG CTGACATGCTCTTACTGCCACTTATGCTGGGCCGAGAGGACGACCA
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Coding sequence (CDS) from alignment at C-australica_Contig_1025:7010..10905-

>mRNA_C-australica_Contig_1025.4.1 ID=mRNA_C-australica_Contig_1025.4.1|Name=mRNA_C-australica_Contig_1025.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=720bp|location=Sequence derived from alignment at C-australica_Contig_1025:7010..10905- (Chrysoparadoxa australica CS_1217)
ATGCTCGTGTTTAGCGACCAAGACGACGGCACCATCCCAACCCACAAAAT
AAATCACGAGGGAGAAGAGGACTACAAAAATATGTGGCAGAAGATCCGTG
CAATTTGGAAGTATGTGCATCATTGGTACAGGGACGATTATGAGTGGTTT
CTGATTGCCGGTGACGACACTTACTTCCTCATGGAAAACCTCAGAAAGTA
CCTCTTGTCCAAGGAGATAACAGCAGCGTCTGAGAAGGGGCTACTTCCCA
TGTACCTGGGCAGGGGATTGAAAAACGATGCTGGGATGCACTTTAACGCA
GGTGGGCCAGGCTACATACTGAATCAGAAGGCCTTGACGGTGCTGAAACA
GAACATGTATGATGAACGCTGCCAGCCTCATGCAAGCAGACGGCAAGAGG
ATGTGCAGGTGGCAAAGTGCTTGGCGCTAAGTTTTGTGTTCCCATATGAC
ACACGTGACGCTTTGGGCAGGGAGAGGTTCCACCCCTTTTCTCCGGGCAC
GCACTTTGGCTATAGAATACCTCCCCATCATGAAACATACCCTGACTCAC
GGGACTGGTACCGCAGGTTCAGTTTTTTTTCCCTCAAAGAGGGCCGTGAC
TGCTGTGCCCCAGACAGCATTAGCTTCCATTATATCGATGCCGACATGAT
GCCGTGGCTACACCACCAGCTTTACACGTGCCGGATAAGCAACAAACTGG
AGGGGGTGAAATATACATGA
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