mRNA_C-australica_Contig_10240.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10240.1.1
Unique NamemRNA_C-australica_Contig_10240.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A2D7NVI9_9BACT (Plug domain-containing protein n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A2D7NVI9_9BACT)

HSP 1 Score: 172 bits (435), Expect = 3.660e-45
Identity = 106/277 (38.27%), Postives = 169/277 (61.01%), Query Frame = 1
Query:    1 NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNE--NPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQLRIAPNSTIS--SFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKLK-TNTFIQIHDRVIPPIQEH 816
            NT+L++  RG I+ V+    G E I  SL +  +P+GII +TFF      + ERLIYNE  N +I   + ++++ +   KR+ VN   NV     +  +L +  +  V +Q +    + I+  ++L+LTSDL G + +P YY +  N +R   +DLLM+THGWRRF+W+ ++   +P + +F E+G  +EG V  + DRSK + +DL +TF EN  FQL+T+S E G FWF+ L+  DTL A I+T+  + KK +K K TN+FI+I  +  P ++++
Sbjct:  278 NTYLLMHIRGNIIKVVKSTLGQEFIYNSLVNDQVPSGIIHITFFKE-DIPLLERLIYNEIANDKINIAIDVTSNIK---KRSKVNFDLNVL----DPDDLKSSGSFSVSVQKKSTDRNKINIENYLWLTSDLIGSIESPNYYTNVANLDRFEMLDLLMLTHGWRRFDWDNVLNKTLPPILYFPEKGFTLEGKVVRWEDRSKPIQADLSMTFFENINFQLKTSSNEAGDFWFEGLQVEDTLNALIQTV--NPKKGRKGKLTNSFIEIKKKTYPKLRKN 544          
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A2E2TRY0_9BACT (Plug domain-containing protein n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A2E2TRY0_9BACT)

HSP 1 Score: 171 bits (434), Expect = 5.100e-45
Identity = 105/276 (38.04%), Postives = 156/276 (56.52%), Query Frame = 1
Query:    1 NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQLRIAPNS--TISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKLKT----NTFIQIHDRVIPPIQ 810
            NT+L++  RG ++ V+   PG E I  SL +  + +GII +TFF      + ERL YNE    +  ++         KR+ VN   +V    G    L    +  V +Q +    +   I ++L+LTSDLKGY+ +P YY + VN +R   +DLLM+THGWRRFEW  ++   +P + +F E+G  +EG V  + DRSK +  DL + F EN  FQ  T+S E G FWF+ LK  DTL A I+T+  ++KK KK K+    N+FI++  +  P I+
Sbjct:  278 NTYLLMHIRGNMIKVVKANPGQEFIYNSLVNDQVSSGIIHVTFFKD-RVPLLERLFYNERANDKINIEADVTPNI-KKRSKVNFDLSVLDPKG----LKYSGSFSVSVQKKSTDRNKTNIENYLWLTSDLKGYIESPNYYTNAVNADRFEMLDLLMLTHGWRRFEWGNVLNRTLPPILYFPEKGFTLEGKVVRWEDRSKPIQVDLSMMFLENITFQARTSSNEAGDFWFEGLKVEDTLNAVIQTI--NSKKEKKGKSGKLINSFIELKKKTYPKIR 545          
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A7D4PSC7_9SPHI (TonB-dependent receptor n=1 Tax=Mucilaginibacter mali TaxID=2740462 RepID=A0A7D4PSC7_9SPHI)

HSP 1 Score: 141 bits (355), Expect = 2.930e-34
Identity = 86/236 (36.44%), Postives = 130/236 (55.08%), Query Frame = 1
Query:   10 LVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVP-LQLRIAPNSTIS--SFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAE--NAAFQLETTSLENGLFWFDKLKFTD 702
            LV Q  G + +    +    S    +     PTGI Q T F P +  VAERLI+ E+   +   ++STDK  YA+R  V +   VT   G+ P + + S  V    ++++A +  +S  S L LTSD+KGY+  P YY +  NP+RL+H+D L++T GWRRF W  L AG+ P++ +  EQG+ + GT+K++   +K VS    + FA   N    ++T + E G F F+ L F D
Sbjct:  379 LVAQINGVVQFAARTKLDGPSNLSIISTKKFPTGIAQFTLFSPDYAPVAERLIFVEHNN-RLDAEISTDKPAYAQRGKVKMDMKVTDVYGD-PVMGSFSVAVTDESKVKMAEDDELSILSNLLLTSDIKGYIEQPNYYFNAANPDRLKHLDQLLLTQGWRRFNWADLQAGKYPQMKYRPEQGLTVTGTIKTF--GNKPVSKGKVVLFASTNNGPLIIDTVADEQGRFVFEGLDFAD 610          
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: UPI00034B069E (TonB-dependent receptor plug domain-containing protein n=1 Tax=Nafulsella turpanensis TaxID=1265690 RepID=UPI00034B069E)

HSP 1 Score: 136 bits (342), Expect = 1.520e-32
Identity = 85/263 (32.32%), Postives = 132/263 (50.19%), Query Frame = 1
Query:    1 NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQL--RIAPNSTISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKLKTNTFIQI 783
              F++   RG     I  + GA+ I  ++    L +GI   T F+       ERL++ +NP  Q +L ++TD+ TY  R        +    G  P +  +S TVV   L  +   N  I SF  LTSDL+G + NP YY +P N +R   +DLLM+THGWRRF W+ ++  ++   +   E+G  + G + +Y  + K     + L   EN  F    T+ ++G F F++L FTDT+T +I       KK ++   N  I+I
Sbjct:  291 GAFVLGHIRGNTFATITGEKGAKEIYAAIPTDSLSSGIAHFTLFNKEGIPQRERLVFIDNPLHQLSLSIATDQPTYDTREEAGFQLKLQNKRGETP-IGNVSATVVEESLLKKFRKNGNIRSFFLLTSDLRGKIENPDYYFNPQNKDRHYLLDLLMLTHGWRRFAWKEVLEEKLKAPSILPEKGFTVNGQLFNYSRQDKKTEGIVELRTMENFLFSKTDTTTKDGQFSFNELHFTDTVT-FIVQADRIRKKDREGNDNFHIEI 551          
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: UPI001F39DF83 (TonB-dependent receptor plug domain-containing protein n=1 Tax=Dyadobacter sp. CY312 TaxID=2907303 RepID=UPI001F39DF83)

HSP 1 Score: 133 bits (335), Expect = 1.280e-31
Identity = 88/264 (33.33%), Postives = 138/264 (52.27%), Query Frame = 1
Query:    1 NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIY-NENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPL-QLRIAPNST-ISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLT---FAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKLKTNTF 774
            N  +V   RG + +V   +  ++S+R +L   DLP GI  LT FD  +R V ERL++ + N  +Q  + +  DK++Y  R    +   VT T GN P  A LS  V    Q+   P S  + S+L LTSDLKG+V  P+YY D     R  H+D LM+T GW RF W+ ++   +P    + EQGI + G VK     ++ VS  + L+   ++++ +  L   + E G F    + FTD+L+A ++ + +   ++     N F
Sbjct:  284 NVHVVGHSRGIVAFVAKGKVSSKSLRLNLNKKDLPEGITHLTLFDDQNRPVCERLVFIDHNSRLQVKVNM--DKKSYKPREKTEMEIMVTDTSGN-PVEANLSVAVTDAGQIAQQPFSNDLVSYLLLTSDLKGFVEQPSYYFDQTKTERKLHMDYLMMTQGWSRFTWQDVMRDSLPAPKRYVEQGITLAGQVKR---NNRAVSEKVMLSIFLYSDSVSTMLAQETNEMGFFEIHNMIFTDSLSARLQGMNKKGNQNLSFLINLF 541          
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A3D8Y2Q5_9BACT (TonB-dependent receptor n=1 Tax=Dyadobacter luteus TaxID=2259619 RepID=A0A3D8Y2Q5_9BACT)

HSP 1 Score: 132 bits (333), Expect = 2.360e-31
Identity = 84/243 (34.57%), Postives = 133/243 (54.73%), Query Frame = 1
Query:    1 NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPL-QLRIAP-NSTISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSD-LHLTFAENAAFQ--LETTSLENGLFWFDKLKFTDTLTA 714
            N  +V   RG + +V   +  + ++R +L+  DLP GI  LT FD  HR V+ERL++ ++   +  ++++ +K+ +  R    L   VT + GN P  A LS  V    Q+   P +  ISS+L LTSDLKG +  P  Y DP N  R   +D LM+T GWRRF W+ ++   +P    F EQGI + GTVK     ++T++   ++  + +N + +  L   + +NG F    + FTD+L+A
Sbjct:  284 NVHVVGHTRGVVTFVANGKVSSRNLRMNLEKKDLPEGITHLTLFDEQHRPVSERLVFIDHNN-RLRVEVTPNKKVFKTREKTELSVMVTDSSGN-PVEAGLSVAVTDAGQIAAQPYDQDISSYLLLTSDLKGTIEKPGSYFDPANSERKTALDQLMMTQGWRRFIWQDVMKDSLPAPQKFIEQGITLSGTVKR---GNRTLTEKVMYSLYLQNDSIKTMLSGETADNGYFAIHNMVFTDSLSA 521          
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A1G9V4N6_9SPHI (TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region n=2 Tax=Daejeonella rubra TaxID=990371 RepID=A0A1G9V4N6_9SPHI)

HSP 1 Score: 132 bits (333), Expect = 2.500e-31
Identity = 79/250 (31.60%), Postives = 134/250 (53.60%), Query Frame = 1
Query:   10 LVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVP---LQLRIAPNSTISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKS 750
            LV Q  G++ +V   +  + +   ++  +  PTGI+QLT F P +  VAERL++  + +    + LST+K  + KR  V +  +V    G  P L + S  +V    + +  A  ++I S L L+SDLKG++  P YY    N +++R +D L++T GWRRFEW+ +++   P L +  E+ +++ G V S L     +   + L  +   +F L+T +  NG+F FD L F D+    ++   E  KK+
Sbjct:  389 LVAQSNGQVQFVSKNKMNSSTFSAAIPKSRFPTGILQLTLFSPKNEPVAERLVFINHSDF-LKINLSTNKPEFQKREKVKIMLDVNDPKGK-PTLGSFSIAIVDETKVPVDEASETSIISNLLLSSDLKGFIEQPNYYFTETNADKVRELDNLLLTQGWRRFEWKNILSNNYPSLVYQPEKSMQVSGKVTS-LTGKPVIGGKVTLFSSSGTSFLLDTLTDNNGVFRFDNLYFNDSTKFIVQARNEKDKKN 635          
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A7D4Q7Z3_9SPHI (Uncharacterized protein n=1 Tax=Mucilaginibacter mali TaxID=2740462 RepID=A0A7D4Q7Z3_9SPHI)

HSP 1 Score: 132 bits (331), Expect = 4.650e-31
Identity = 85/258 (32.95%), Postives = 137/258 (53.10%), Query Frame = 1
Query:    7 FLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIY-NENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQLRIAPN----STISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENA--AFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKL 759
            ++V Q  G + +    +    S    +   ++PTGIIQ T F      +AERL++ N N  +++ ++   DKE Y+KR  VN+   VT  GG  P     S +V   + ++ P+    ++I S L LTSD+KGY+  P YY +P NP+R +H+D L++T GWRRF W  ++  + P++ +  E+   I G + + +D  K V       FA        ++T + ENG F F  L FTDT+ A I+   +  +K+ K+
Sbjct:  378 YIVGQSNGVVQFAAKTRMDRASNLSYITAKNIPTGIIQFTLFSAEMTPLAERLVFINHNDYLRSVIK--PDKEVYSKRGKVNMDITVTDAGGQ-PISGNFSVSVTD-EGKVKPDENNETSILSNLLLTSDIKGYIEQPNYYFNPQNPDRQKHLDQLLLTQGWRRFNWADVLTNKFPQIIYQPEENPSIGGKIVNLMD--KPVPHGKVTLFASKGDNTIIIDTVADENGHFVFRNLHFTDTVRATIRATDQKDRKNVKI 629          
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A1T5EZQ3_9SPHI (TonB-dependent Receptor Plug Domain n=1 Tax=Daejeonella lutea TaxID=572036 RepID=A0A1T5EZQ3_9SPHI)

HSP 1 Score: 131 bits (330), Expect = 6.210e-31
Identity = 84/233 (36.05%), Postives = 126/233 (54.08%), Query Frame = 1
Query:   10 LVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQLRIAPN----STISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENAAFQLETTSLENGLFWFDKLKF 696
            LV+Q  G I            +   +    LP GI+QLT F  L+  VAERL++ +N    + LQ++  +  Y  +  V L FN     GN P LA+ S +V   + ++  +    +TI S L LTS+LKG+V +P YY +  N +R RH+DLLM+T GWRRFEW+ + A +VPE  F  E+ +++ G + + L+ S   S++++L         L T + E G F FD L F
Sbjct:  369 LVVQSMGRIYGTSSTIVDKSLLTVRIPRLRLPGGIVQLTLFSGLNTPVAERLVFVDNSLDNSRLQITPARNEYEMKERVRLKFNARDGFGN-PVLASFSLSVTD-EAKVPSDEDKETTILSNLLLTSELKGFVEDPNYYFNEANTDRKRHLDLLMMTQGWRRFEWKDVFARKVPEPEFLPERALKVSGRITTALN-SPVPSANVNLMIPGQGMPILNTRTDEAGKFTFDTLDF 598          
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A2D0NHI7_9BACT (Uncharacterized protein n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0NHI7_9BACT)

HSP 1 Score: 131 bits (329), Expect = 8.140e-31
Identity = 80/259 (30.89%), Postives = 133/259 (51.35%), Query Frame = 1
Query:   25 RGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQLRIAPNSTISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHL-TFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKLKTNTFIQIHDRVI 798
            RG+I Y      G    RF+    +LP+GI+  T FD   R V ERL++N++P+ +  + + TDK  Y+ +  V L  +   +   +    ++S         +  N  + ++L L SDL+G +HN   Y    +P     +DLL++THGWRRF W+ ++A  +P +NF  EQ + I G V     R K V +D+ L   + +    ++ T+ ENGLF+F+   F DT    I+    + +K +KLK   F +   +++
Sbjct:  280 RGQIFYT-HEFTGDSLRRFTFPKAELPSGIVHFTLFDAQQRPVCERLVFNKSPKERVEVDIRTDKPVYSAKEPVKLALSAKRSQNAVRAKLSVSVYQDIPTAAVPENLNLVNYLLLQSDLRGSIHNIQQYFAEDSPKVNALLDLLLMTHGWRRFHWQDVLAERLPPINFPREQHLTIAGKVTRQGQR-KPVQADVMLQVLSSDQLTAVDLTTSENGLFYFEGFNFRDTTDILIQANLHNARKKQKLKAGEFRRAGSKLV 536          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7NVI9_9BACT3.660e-4538.27Plug domain-containing protein n=1 Tax=Flammeovirg... [more]
A0A2E2TRY0_9BACT5.100e-4538.04Plug domain-containing protein n=1 Tax=Flammeovirg... [more]
A0A7D4PSC7_9SPHI2.930e-3436.44TonB-dependent receptor n=1 Tax=Mucilaginibacter m... [more]
UPI00034B069E1.520e-3232.32TonB-dependent receptor plug domain-containing pro... [more]
UPI001F39DF831.280e-3133.33TonB-dependent receptor plug domain-containing pro... [more]
A0A3D8Y2Q5_9BACT2.360e-3134.57TonB-dependent receptor n=1 Tax=Dyadobacter luteus... [more]
A0A1G9V4N6_9SPHI2.500e-3131.60TonB-dependent outer membrane receptor, SusC/RagA ... [more]
A0A7D4Q7Z3_9SPHI4.650e-3132.95Uncharacterized protein n=1 Tax=Mucilaginibacter m... [more]
A0A1T5EZQ3_9SPHI6.210e-3136.05TonB-dependent Receptor Plug Domain n=1 Tax=Daejeo... [more]
A0A2D0NHI7_9BACT8.140e-3130.89Uncharacterized protein n=1 Tax=Flavilitoribacter ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10240contigC-australica_Contig_10240:3..818 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1124780.ANNU01000017_gene1903
PFAMsA2M_N,Plug
Model size816
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.49e-33
EggNOG OGsCOG1629@1|root,COG2373@1|root,COG1629@2|Bacteria,COG2373@2|Bacteria,4NG2S@976|Bacteroidetes,47K94@768503|Cytophagia
DescriptionTonB-dependent Receptor Plug Domain
Cds size816
COG categoryP
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586761.6640391-CDS-C-australica_Contig_10240:2..8181682586761.6640391-CDS-C-australica_Contig_10240:2..818Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10240 3..818 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10240.1.1prot_C-australica_Contig_10240.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10240 3..818 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10240.1.1

>prot_C-australica_Contig_10240.1.1 ID=prot_C-australica_Contig_10240.1.1|Name=mRNA_C-australica_Contig_10240.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=272bp
NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRA
VAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELAT
LSTTVVPLQLRIAPNSTISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHI
DLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVS
SDLHLTFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKS
KKLKTNTFIQIHDRVIPPIQEH
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mRNA from alignment at C-australica_Contig_10240:3..818+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10240.1.1 ID=mRNA_C-australica_Contig_10240.1.1|Name=mRNA_C-australica_Contig_10240.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=816bp|location=Sequence derived from alignment at C-australica_Contig_10240:3..818+ (Chrysoparadoxa australica CS_1217)
AATACTTTTCTTGTTCTTCAATGTCGGGGGGAGATACTTTATGTCATAGG GCCACAGCCAGGTGCTGAATCGATACGGTTTTCTCTACAAGACACAGATT TACCAACTGGAATTATCCAACTGACATTTTTTGACCCGCTACATAGGGCA GTGGCAGAACGTCTGATCTATAACGAAAATCCAGAAATTCAGACGACACT TCAGTTGTCAACTGATAAGGAAACTTATGCTAAGCGTGCAAATGTGAACC TTGGCTTTAACGTAACTGGTACAGGTGGAAATCTTCCCGAACTTGCTACG CTATCAACCACCGTAGTTCCTCTACAACTTCGAATCGCGCCGAATTCGAC TATTTCTTCCTTCTTATTTCTTACCTCTGATCTGAAAGGCTATGTTCATA ACCCGACGTATTATTTGGACCCGGTTAATCCAAACAGATTAAGACACATA GATCTTTTAATGATAACTCATGGATGGAGACGTTTTGAATGGGAGCCATT AATAGCTGGAGAAGTTCCGGAGCTTAACTTTTTCTTTGAACAAGGAATAA GAATTGAAGGTACAGTCAAAAGCTATTTAGATAGGAGCAAAACTGTATCA AGTGATCTACATTTAACTTTCGCAGAAAATGCTGCATTCCAGTTAGAAAC CACTTCGCTGGAGAATGGGTTGTTTTGGTTTGATAAATTGAAATTTACTG ATACCTTAACTGCCTATATTAAGACTCTTCCCGAAAGCACAAAAAAATCT AAAAAGCTTAAAACCAATACTTTCATTCAAATTCATGACCGGGTAATACC TCCTATTCAGGAACAT
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Coding sequence (CDS) from alignment at C-australica_Contig_10240:3..818+

>mRNA_C-australica_Contig_10240.1.1 ID=mRNA_C-australica_Contig_10240.1.1|Name=mRNA_C-australica_Contig_10240.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=816bp|location=Sequence derived from alignment at C-australica_Contig_10240:3..818+ (Chrysoparadoxa australica CS_1217)
AATACTTTTCTTGTTCTTCAATGTCGGGGGGAGATACTTTATGTCATAGG
GCCACAGCCAGGTGCTGAATCGATACGGTTTTCTCTACAAGACACAGATT
TACCAACTGGAATTATCCAACTGACATTTTTTGACCCGCTACATAGGGCA
GTGGCAGAACGTCTGATCTATAACGAAAATCCAGAAATTCAGACGACACT
TCAGTTGTCAACTGATAAGGAAACTTATGCTAAGCGTGCAAATGTGAACC
TTGGCTTTAACGTAACTGGTACAGGTGGAAATCTTCCCGAACTTGCTACG
CTATCAACCACCGTAGTTCCTCTACAACTTCGAATCGCGCCGAATTCGAC
TATTTCTTCCTTCTTATTTCTTACCTCTGATCTGAAAGGCTATGTTCATA
ACCCGACGTATTATTTGGACCCGGTTAATCCAAACAGATTAAGACACATA
GATCTTTTAATGATAACTCATGGATGGAGACGTTTTGAATGGGAGCCATT
AATAGCTGGAGAAGTTCCGGAGCTTAACTTTTTCTTTGAACAAGGAATAA
GAATTGAAGGTACAGTCAAAAGCTATTTAGATAGGAGCAAAACTGTATCA
AGTGATCTACATTTAACTTTCGCAGAAAATGCTGCATTCCAGTTAGAAAC
CACTTCGCTGGAGAATGGGTTGTTTTGGTTTGATAAATTGAAATTTACTG
ATACCTTAACTGCCTATATTAAGACTCTTCCCGAAAGCACAAAAAAATCT
AAAAAGCTTAAAACCAATACTTTCATTCAAATTCATGACCGGGTAATACC
TCCTATTCAGGAACAT
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