mRNA_C-australica_Contig_10240.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A2D7NVI9_9BACT (Plug domain-containing protein n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A2D7NVI9_9BACT) HSP 1 Score: 172 bits (435), Expect = 3.660e-45 Identity = 106/277 (38.27%), Postives = 169/277 (61.01%), Query Frame = 1 Query: 1 NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNE--NPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQLRIAPNSTIS--SFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKLK-TNTFIQIHDRVIPPIQEH 816 NT+L++ RG I+ V+ G E I SL + +P+GII +TFF + ERLIYNE N +I + ++++ + KR+ VN NV + +L + + V +Q + + I+ ++L+LTSDL G + +P YY + N +R +DLLM+THGWRRF+W+ ++ +P + +F E+G +EG V + DRSK + +DL +TF EN FQL+T+S E G FWF+ L+ DTL A I+T+ + KK +K K TN+FI+I + P ++++ Sbjct: 278 NTYLLMHIRGNIIKVVKSTLGQEFIYNSLVNDQVPSGIIHITFFKE-DIPLLERLIYNEIANDKINIAIDVTSNIK---KRSKVNFDLNVL----DPDDLKSSGSFSVSVQKKSTDRNKINIENYLWLTSDLIGSIESPNYYTNVANLDRFEMLDLLMLTHGWRRFDWDNVLNKTLPPILYFPEKGFTLEGKVVRWEDRSKPIQADLSMTFFENINFQLKTSSNEAGDFWFEGLQVEDTLNALIQTV--NPKKGRKGKLTNSFIEIKKKTYPKLRKN 544
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A2E2TRY0_9BACT (Plug domain-containing protein n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A2E2TRY0_9BACT) HSP 1 Score: 171 bits (434), Expect = 5.100e-45 Identity = 105/276 (38.04%), Postives = 156/276 (56.52%), Query Frame = 1 Query: 1 NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQLRIAPNS--TISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKLKT----NTFIQIHDRVIPPIQ 810 NT+L++ RG ++ V+ PG E I SL + + +GII +TFF + ERL YNE + ++ KR+ VN +V G L + V +Q + + I ++L+LTSDLKGY+ +P YY + VN +R +DLLM+THGWRRFEW ++ +P + +F E+G +EG V + DRSK + DL + F EN FQ T+S E G FWF+ LK DTL A I+T+ ++KK KK K+ N+FI++ + P I+ Sbjct: 278 NTYLLMHIRGNMIKVVKANPGQEFIYNSLVNDQVSSGIIHVTFFKD-RVPLLERLFYNERANDKINIEADVTPNI-KKRSKVNFDLSVLDPKG----LKYSGSFSVSVQKKSTDRNKTNIENYLWLTSDLKGYIESPNYYTNAVNADRFEMLDLLMLTHGWRRFEWGNVLNRTLPPILYFPEKGFTLEGKVVRWEDRSKPIQVDLSMMFLENITFQARTSSNEAGDFWFEGLKVEDTLNAVIQTI--NSKKEKKGKSGKLINSFIELKKKTYPKIR 545
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A7D4PSC7_9SPHI (TonB-dependent receptor n=1 Tax=Mucilaginibacter mali TaxID=2740462 RepID=A0A7D4PSC7_9SPHI) HSP 1 Score: 141 bits (355), Expect = 2.930e-34 Identity = 86/236 (36.44%), Postives = 130/236 (55.08%), Query Frame = 1 Query: 10 LVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVP-LQLRIAPNSTIS--SFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAE--NAAFQLETTSLENGLFWFDKLKFTD 702 LV Q G + + + S + PTGI Q T F P + VAERLI+ E+ + ++STDK YA+R V + VT G+ P + + S V ++++A + +S S L LTSD+KGY+ P YY + NP+RL+H+D L++T GWRRF W L AG+ P++ + EQG+ + GT+K++ +K VS + FA N ++T + E G F F+ L F D Sbjct: 379 LVAQINGVVQFAARTKLDGPSNLSIISTKKFPTGIAQFTLFSPDYAPVAERLIFVEHNN-RLDAEISTDKPAYAQRGKVKMDMKVTDVYGD-PVMGSFSVAVTDESKVKMAEDDELSILSNLLLTSDIKGYIEQPNYYFNAANPDRLKHLDQLLLTQGWRRFNWADLQAGKYPQMKYRPEQGLTVTGTIKTF--GNKPVSKGKVVLFASTNNGPLIIDTVADEQGRFVFEGLDFAD 610
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: UPI00034B069E (TonB-dependent receptor plug domain-containing protein n=1 Tax=Nafulsella turpanensis TaxID=1265690 RepID=UPI00034B069E) HSP 1 Score: 136 bits (342), Expect = 1.520e-32 Identity = 85/263 (32.32%), Postives = 132/263 (50.19%), Query Frame = 1 Query: 1 NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQL--RIAPNSTISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKLKTNTFIQI 783 F++ RG I + GA+ I ++ L +GI T F+ ERL++ +NP Q +L ++TD+ TY R + G P + +S TVV L + N I SF LTSDL+G + NP YY +P N +R +DLLM+THGWRRF W+ ++ ++ + E+G + G + +Y + K + L EN F T+ ++G F F++L FTDT+T +I KK ++ N I+I Sbjct: 291 GAFVLGHIRGNTFATITGEKGAKEIYAAIPTDSLSSGIAHFTLFNKEGIPQRERLVFIDNPLHQLSLSIATDQPTYDTREEAGFQLKLQNKRGETP-IGNVSATVVEESLLKKFRKNGNIRSFFLLTSDLRGKIENPDYYFNPQNKDRHYLLDLLMLTHGWRRFAWKEVLEEKLKAPSILPEKGFTVNGQLFNYSRQDKKTEGIVELRTMENFLFSKTDTTTKDGQFSFNELHFTDTVT-FIVQADRIRKKDREGNDNFHIEI 551
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: UPI001F39DF83 (TonB-dependent receptor plug domain-containing protein n=1 Tax=Dyadobacter sp. CY312 TaxID=2907303 RepID=UPI001F39DF83) HSP 1 Score: 133 bits (335), Expect = 1.280e-31 Identity = 88/264 (33.33%), Postives = 138/264 (52.27%), Query Frame = 1 Query: 1 NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIY-NENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPL-QLRIAPNST-ISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLT---FAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKLKTNTF 774 N +V RG + +V + ++S+R +L DLP GI LT FD +R V ERL++ + N +Q + + DK++Y R + VT T GN P A LS V Q+ P S + S+L LTSDLKG+V P+YY D R H+D LM+T GW RF W+ ++ +P + EQGI + G VK ++ VS + L+ ++++ + L + E G F + FTD+L+A ++ + + ++ N F Sbjct: 284 NVHVVGHSRGIVAFVAKGKVSSKSLRLNLNKKDLPEGITHLTLFDDQNRPVCERLVFIDHNSRLQVKVNM--DKKSYKPREKTEMEIMVTDTSGN-PVEANLSVAVTDAGQIAQQPFSNDLVSYLLLTSDLKGFVEQPSYYFDQTKTERKLHMDYLMMTQGWSRFTWQDVMRDSLPAPKRYVEQGITLAGQVKR---NNRAVSEKVMLSIFLYSDSVSTMLAQETNEMGFFEIHNMIFTDSLSARLQGMNKKGNQNLSFLINLF 541
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A3D8Y2Q5_9BACT (TonB-dependent receptor n=1 Tax=Dyadobacter luteus TaxID=2259619 RepID=A0A3D8Y2Q5_9BACT) HSP 1 Score: 132 bits (333), Expect = 2.360e-31 Identity = 84/243 (34.57%), Postives = 133/243 (54.73%), Query Frame = 1 Query: 1 NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPL-QLRIAP-NSTISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSD-LHLTFAENAAFQ--LETTSLENGLFWFDKLKFTDTLTA 714 N +V RG + +V + + ++R +L+ DLP GI LT FD HR V+ERL++ ++ + ++++ +K+ + R L VT + GN P A LS V Q+ P + ISS+L LTSDLKG + P Y DP N R +D LM+T GWRRF W+ ++ +P F EQGI + GTVK ++T++ ++ + +N + + L + +NG F + FTD+L+A Sbjct: 284 NVHVVGHTRGVVTFVANGKVSSRNLRMNLEKKDLPEGITHLTLFDEQHRPVSERLVFIDHNN-RLRVEVTPNKKVFKTREKTELSVMVTDSSGN-PVEAGLSVAVTDAGQIAAQPYDQDISSYLLLTSDLKGTIEKPGSYFDPANSERKTALDQLMMTQGWRRFIWQDVMKDSLPAPQKFIEQGITLSGTVKR---GNRTLTEKVMYSLYLQNDSIKTMLSGETADNGYFAIHNMVFTDSLSA 521
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A1G9V4N6_9SPHI (TonB-dependent outer membrane receptor, SusC/RagA subfamily, signature region n=2 Tax=Daejeonella rubra TaxID=990371 RepID=A0A1G9V4N6_9SPHI) HSP 1 Score: 132 bits (333), Expect = 2.500e-31 Identity = 79/250 (31.60%), Postives = 134/250 (53.60%), Query Frame = 1 Query: 10 LVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVP---LQLRIAPNSTISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKS 750 LV Q G++ +V + + + ++ + PTGI+QLT F P + VAERL++ + + + LST+K + KR V + +V G P L + S +V + + A ++I S L L+SDLKG++ P YY N +++R +D L++T GWRRFEW+ +++ P L + E+ +++ G V S L + + L + +F L+T + NG+F FD L F D+ ++ E KK+ Sbjct: 389 LVAQSNGQVQFVSKNKMNSSTFSAAIPKSRFPTGILQLTLFSPKNEPVAERLVFINHSDF-LKINLSTNKPEFQKREKVKIMLDVNDPKGK-PTLGSFSIAIVDETKVPVDEASETSIISNLLLSSDLKGFIEQPNYYFTETNADKVRELDNLLLTQGWRRFEWKNILSNNYPSLVYQPEKSMQVSGKVTS-LTGKPVIGGKVTLFSSSGTSFLLDTLTDNNGVFRFDNLYFNDSTKFIVQARNEKDKKN 635
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A7D4Q7Z3_9SPHI (Uncharacterized protein n=1 Tax=Mucilaginibacter mali TaxID=2740462 RepID=A0A7D4Q7Z3_9SPHI) HSP 1 Score: 132 bits (331), Expect = 4.650e-31 Identity = 85/258 (32.95%), Postives = 137/258 (53.10%), Query Frame = 1 Query: 7 FLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIY-NENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQLRIAPN----STISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENA--AFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKL 759 ++V Q G + + + S + ++PTGIIQ T F +AERL++ N N +++ ++ DKE Y+KR VN+ VT GG P S +V + ++ P+ ++I S L LTSD+KGY+ P YY +P NP+R +H+D L++T GWRRF W ++ + P++ + E+ I G + + +D K V FA ++T + ENG F F L FTDT+ A I+ + +K+ K+ Sbjct: 378 YIVGQSNGVVQFAAKTRMDRASNLSYITAKNIPTGIIQFTLFSAEMTPLAERLVFINHNDYLRSVIK--PDKEVYSKRGKVNMDITVTDAGGQ-PISGNFSVSVTD-EGKVKPDENNETSILSNLLLTSDIKGYIEQPNYYFNPQNPDRQKHLDQLLLTQGWRRFNWADVLTNKFPQIIYQPEENPSIGGKIVNLMD--KPVPHGKVTLFASKGDNTIIIDTVADENGHFVFRNLHFTDTVRATIRATDQKDRKNVKI 629
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A1T5EZQ3_9SPHI (TonB-dependent Receptor Plug Domain n=1 Tax=Daejeonella lutea TaxID=572036 RepID=A0A1T5EZQ3_9SPHI) HSP 1 Score: 131 bits (330), Expect = 6.210e-31 Identity = 84/233 (36.05%), Postives = 126/233 (54.08%), Query Frame = 1 Query: 10 LVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQLRIAPN----STISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHLTFAENAAFQLETTSLENGLFWFDKLKF 696 LV+Q G I + + LP GI+QLT F L+ VAERL++ +N + LQ++ + Y + V L FN GN P LA+ S +V + ++ + +TI S L LTS+LKG+V +P YY + N +R RH+DLLM+T GWRRFEW+ + A +VPE F E+ +++ G + + L+ S S++++L L T + E G F FD L F Sbjct: 369 LVVQSMGRIYGTSSTIVDKSLLTVRIPRLRLPGGIVQLTLFSGLNTPVAERLVFVDNSLDNSRLQITPARNEYEMKERVRLKFNARDGFGN-PVLASFSLSVTD-EAKVPSDEDKETTILSNLLLTSELKGFVEDPNYYFNEANTDRKRHLDLLMMTQGWRRFEWKDVFARKVPEPEFLPERALKVSGRITTALN-SPVPSANVNLMIPGQGMPILNTRTDEAGKFTFDTLDF 598
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Match: A0A2D0NHI7_9BACT (Uncharacterized protein n=1 Tax=Flavilitoribacter nigricans DSM 23189 = NBRC 102662 TaxID=1122177 RepID=A0A2D0NHI7_9BACT) HSP 1 Score: 131 bits (329), Expect = 8.140e-31 Identity = 80/259 (30.89%), Postives = 133/259 (51.35%), Query Frame = 1 Query: 25 RGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAVAERLIYNENPEIQTTLQLSTDKETYAKRANVNLGFNVTGTGGNLPELATLSTTVVPLQLRIAPNSTISSFLFLTSDLKGYVHNPTYYLDPVNPNRLRHIDLLMITHGWRRFEWEPLIAGEVPELNFFFEQGIRIEGTVKSYLDRSKTVSSDLHL-TFAENAAFQLETTSLENGLFWFDKLKFTDTLTAYIKTLPESTKKSKKLKTNTFIQIHDRVI 798 RG+I Y G RF+ +LP+GI+ T FD R V ERL++N++P+ + + + TDK Y+ + V L + + + ++S + N + ++L L SDL+G +HN Y +P +DLL++THGWRRF W+ ++A +P +NF EQ + I G V R K V +D+ L + + ++ T+ ENGLF+F+ F DT I+ + +K +KLK F + +++ Sbjct: 280 RGQIFYT-HEFTGDSLRRFTFPKAELPSGIVHFTLFDAQQRPVCERLVFNKSPKERVEVDIRTDKPVYSAKEPVKLALSAKRSQNAVRAKLSVSVYQDIPTAAVPENLNLVNYLLLQSDLRGSIHNIQQYFAEDSPKVNALLDLLLMTHGWRRFHWQDVLAERLPPINFPREQHLTIAGKVTRQGQR-KPVQADVMLQVLSSDQLTAVDLTTSENGLFYFEGFNFRDTTDILIQANLHNARKKQKLKAGEFRRAGSKLV 536 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10240.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10240.1.1 >prot_C-australica_Contig_10240.1.1 ID=prot_C-australica_Contig_10240.1.1|Name=mRNA_C-australica_Contig_10240.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=272bp NTFLVLQCRGEILYVIGPQPGAESIRFSLQDTDLPTGIIQLTFFDPLHRAback to top mRNA from alignment at C-australica_Contig_10240:3..818+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10240.1.1 ID=mRNA_C-australica_Contig_10240.1.1|Name=mRNA_C-australica_Contig_10240.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=816bp|location=Sequence derived from alignment at C-australica_Contig_10240:3..818+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10240:3..818+ >mRNA_C-australica_Contig_10240.1.1 ID=mRNA_C-australica_Contig_10240.1.1|Name=mRNA_C-australica_Contig_10240.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=816bp|location=Sequence derived from alignment at C-australica_Contig_10240:3..818+ (Chrysoparadoxa australica CS_1217)back to top |