BLAST of mRNA_C-australica_Contig_10233.1.1 vs. uniprot Match: UPI00034A927C (ATP-dependent RecD-like DNA helicase n=4 Tax=Nocardiopsis TaxID=2013 RepID=UPI00034A927C)
Query: 1 GMADKVIQGTLKRVEWRSP-TGVQILLVD-GEDGEAFWAFAQEQRVYVGERVELSGSWNAAPPPGRVLHVSRLVSTPPKSAQGLTDYVSQAL--ACDTTIANAIVSQFGDLTVTVLDDKPERLVDVPGIGRAAVPEFADAW 411
G V+QG L+RV + + G + VD G G+ V GE + + G W + P GR HV + P + QG+ Y+ L +A IV FG + V++++P+RL++VPG+G ADAW
Sbjct: 5 GPRGAVVQGVLERVTYANEENGFTVARVDTGRGGDLLTVVGSLMGVQPGESLRMRGRWGSHPQYGRQFHVDDYTTVLPATVQGIRRYLGSGLIKGIGPKMAERIVEHFGTDALEVVEEEPDRLIEVPGLGPKRTAAIADAW 145
Query: 16 VIQGTLKRVEWRSP-TGVQILLVD-GEDG-EAFWAFAQEQRVYVGERVELSGSWNAAPPPGRVLHVSRLVSTPPKSAQGLTDYVSQAL--ACDTTIANAIVSQFGDLTVTVLDDKPERLVDVPGIGRAAVPEFADAWRRSRTHSQSQRVMERMGLN 468
V+QG L+R+ + + TG + VD G G + V GE + + G W + P GR HV + P + QG+ Y+ L +A IV FG + V++D+PERL++VPG+G ADAW + + ++ +G++
Sbjct: 12 VVQGVLERITYANEDTGYTVARVDTGRGGSDLLTVVGSLMGVQPGEALRMQGRWGSHPQYGRQFHVDDYTTVLPATVQGIRRYLGSGLIKGIGPKMAERIVEHFGTDALDVIEDEPERLIEVPGLGPKRTRLIADAWEEQKAIKEVMVFLQGVGVS 167
BLAST of mRNA_C-australica_Contig_10233.1.1 vs. uniprot Match: UPI0007C69029 (ATP-dependent RecD-like DNA helicase n=2 Tax=Nonomuraea TaxID=83681 RepID=UPI0007C69029)
Query: 130 VYVGERVELSGSWNAAPPPGRVLHVSRLVSTPPKSAQGLTDYVSQAL--ACDTTIANAIVSQFGDLTVTVLDDKPERLVDVPGIGRAAVPEFADAWRRSRTHSQSQRVMERMGLN 468
V GER++L G W + P GR L V ++ P S + +T Y+ L +A+AIVSQFG+ T+ V+D +PERL DV IG + +AW + ++ V++ G++
Sbjct: 41 VQPGERLQLGGEWESHPRFGRRLAVKQVERVAPSSVRAITLYLGSGLIRGVGPRLAHAIVSQFGEQTLKVIDTEPERLRDVVNIGAIRQAQIVEAWAEQKAVAELMVVLQGFGVS 155
BLAST of mRNA_C-australica_Contig_10233.1.1 vs. uniprot Match: A9WGW5_CHLAA (ATP-dependent RecD-like DNA helicase n=3 Tax=Chloroflexi TaxID=200795 RepID=A9WGW5_CHLAA)
Query: 130 VYVGERVELSGSWNAAPPPGRVLHVSRLVSTPPKSAQGLTDYVSQAL--ACDTTIANAIVSQFGDLTVTVLDDKPERLVDVPGIGRAAVPEFADAWRRSRTHSQSQRVMERMGL 465
V GE++ L G W P GR HV R S P + G+ Y+ L +A I FG T+ VLD +PERL +VPG+GR A+AWR + +++ +GL
Sbjct: 43 VQPGEQLSLEGEWRDHPTHGRQFHVQRYRSRLPATVDGIRRYLGSGLIKGVGPVLAKRITETFGKYTLEVLDREPERLSEVPGLGRKKAVLIAEAWRAQQRIKDLMLLLQDLGL 156
Query: 19 IQGTLKRVEWRSPTGVQILLVDGEDGEAFWAFAQEQRVYV---------GERVELSGSWNAAPPPGRVLHVSRLVSTPPKSAQGLTDYVSQALA--CDTTIANAIVSQFGDLTVTVLDDKPERLVDVPGIGRAAVPEFADAWRR 417
I+GTL+R+++ + G + E+ F + V V GE+++L GSW P G V + + P SA+G+ Y+ L +A+ +V +FGD T+ V+D++PERL +V GIG+ + A AW+R
Sbjct: 4 IEGTLERIKYSNDEGSWCVAQLREETSGETLFKRPTLVTVVGNLLGARPGEQLKLWGSWKRHPSFGLQFDVRTVKTDVPVSAKGIEIYLGSGLVQGIGPKLASRLVEKFGDKTLDVIDNEPERLSEVEGIGQVRIERIAAAWKR 147
Query: 19 IQGTLKRVEWRSP-TGVQILLVDGEDGEAFWAFAQEQRVYVGERVELSGSWNAAPPPGRVLHVSRLVSTPPKSAQGLTDYVSQAL--ACDTTIANAIVSQFGDLTVTVLDDKPERLVDVPGIGRAAVPEFADAWRRSRTHSQSQRVMERMGL 465
I+GT+K + +R+ G +L + G+ A VGER+E++G+W P GR + P + L +Y+ L + A IV+ FG T+ VL+++P+RL +VPGIGR + A+++ R ++ G+
Sbjct: 20 IKGTVKSIIFRNEENGYTVLELVDATGDEITAVGALPLASVGERIEITGTWTEHPTYGRQFRAQGCRTLAPATLSALVNYLGSGLIRGVGESTAREIVNTFGTDTLAVLENEPQRLTEVPGIGRLRAAKIAESFAAQRDMRDIMLALQEFGV 171
Query: 10 DKVIQGTLKRVEWRSPTG-VQILLVDGEDGEAFWAFAQEQRVYVGERVELSGSWNAAPPPGRVLHVSRLVSTPPKSAQGLTDYVSQALA--CDTTIANAIVSQFGDLTVTVLDDKPERLVDVPGIGRAAVPEFADAWRRSRTHSQSQRVMERMGL 465
+ ++G L W S G I + G D A + G+ + L G W GR +V PKS GL Y+S T A +V FG+ T+ ++D++P+RL++V GIG+ V + W+ R H + V+ +G+
Sbjct: 4 ENTLEGELIGFRWVSDDGSFAIARLRGPDQREVVAVGPLGHIQPGQHMTLRGHWETRSMFGRQFRARSVVVEDPKSLLGLERYLSDGAVKGLGPTFARRVVDHFGNDTLRIIDEEPQRLMEVSGIGKKRVATITEHWQTGRIHRELHTVLRGLGI 158
BLAST of mRNA_C-australica_Contig_10233.1.1 vs. uniprot Match: A0A7V4GHG1_9DELT (ATP-dependent RecD-like DNA helicase n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A7V4GHG1_9DELT)
Query: 19 IQGTLKRVEWRSP-TGVQILLVDGEDG-EAFWAFAQEQRVYVGERVELSGSWNAAPPPGRVLHVSRLVSTPPKSAQGLTDYVSQAL--ACDTTIANAIVSQFGDLTVTVLDDKPERLVDVPGIGRAAVPEFADAWRRSRTHSQSQRVMERMGLN 468
I+GT++RV +RS +G +L V + G E VGE + L G W P G V S P + GL Y+ L +A IV+ FG+ T+ VL+++PERL +V G+G V +AWR R ++ ++ G++
Sbjct: 4 IRGTVERVTFRSEESGYAVLRVLPDGGSEPVTVVGNVGAAQVGEELSLRGRWVRNPRFGPQFEVETYRSVVPATLAGLQRYLGSGLIRGIGKELARRIVATFGEETLAVLEERPERLAEVEGLGPKRVERVREAWREQRVVKEAMIFLQSHGIS 157
BLAST of mRNA_C-australica_Contig_10233.1.1 vs. uniprot Match: A0A840QEX7_9PSEU (ATP-dependent RecD-like DNA helicase n=4 Tax=Saccharopolyspora TaxID=1835 RepID=A0A840QEX7_9PSEU)
Query: 16 VIQGTLKRVEWRSP-TGVQILLVDGEDGEAFWAFAQEQRVYVGERVELSGSWNAAPPPGRVLHVSRLVSTPPKSAQGLTDYVSQAL--ACDTTIANAIVSQFGDLTVTVLDDKPERLVDVPGIGRAAVPEFADAWRRSRTHSQSQRVMERMGLN 468
V++GTL+R+ + + TG + +D G GE + + G W A P GR HV + P + QG+ Y+ L +A IV FG + V++ PERL++VP +G ADAW + + ++ +G++
Sbjct: 12 VLEGTLERITFANEDTGYTVARIDAGRGNLVTVVGALLGAQPGEALRMRGRWGAHPQYGRQFHVDDYRTVLPATVQGIRRYLGSGLIKGIGPKLAEKIVDHFGTDALEVIEQTPERLIEVPKLGPKRTKLIADAWEEQKAIKEVMVFLQGVGVS 165
Query: 130 VYVGERVELSGSWNAAPPPGRVLHVSRLVSTPPKSAQGLTDYVS--QALACDTTIANAIVSQFGDLTVTVLDDKPERLVDVPGIGRAAVPEFADAWRRSRTHSQSQRVMERMGLN 468
V VG+R+ L G W P GR V + P++A+GL Y++ + +A IV+ FGD T+ VLD+ PERL++V GIG + ++WR R + ++ +GL+
Sbjct: 53 VEVGDRLRLQGHWVTDPRYGRQFAVESYLPVLPETAEGLERYLAGQRVQGIGRVVAKRIVAHFGDSTLKVLDEHPERLLEVEGIGPGRLGRVIESWRLHRGERDAVIFLQGLGLS 167
The following BLAST results are available for this feature:
DNA-dependent ATPase and ATP-dependent 5'-3' DNA helicase. Has no activity on blunt DNA or DNA with 3'-overhangs, requires at least 10 bases of 5'-ssDNA for helicase activity
Cds size
465
COG category
L
BRITE
ko00000,ko00001,ko01000,ko03400
Relationships
The following UTR feature(s) are a part of this mRNA: