mRNA_C-australica_Contig_10229.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Match: A0A222E6A8_9RHOB (Sugar ABC transporter ATPase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E6A8_9RHOB) HSP 1 Score: 355 bits (912), Expect = 2.930e-121 Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 1 Query: 1 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGARTTIKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 549 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATG RTT+KLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR Sbjct: 180 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGPRTTVKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 362
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Match: A0A0B3RR97_9RHOB (Sugar ABC transporter ATP-binding protein n=5 Tax=Mameliella TaxID=1434019 RepID=A0A0B3RR97_9RHOB) HSP 1 Score: 303 bits (776), Expect = 1.300e-100 Identity = 151/183 (82.51%), Postives = 165/183 (90.16%), Query Frame = 1 Query: 1 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGARTTIKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 549 LKEQMPDRTMIYVTHDQVEAMTLA+RIVVLANKGIAQVG+PLELYERPNSEFVAQFIGSP+MNLLPGEV+ TG +T +KL+GGGTALSDYPT+ AD GLRVNVGVRPEDFV E ++SG V I EALGEVTLLYF+A+ GGDPVI KLPGIH EMRGK VSLGA P+KVHLFA+GVSLLYR Sbjct: 180 LKEQMPDRTMIYVTHDQVEAMTLASRIVVLANKGIAQVGSPLELYERPNSEFVAQFIGSPSMNLLPGEVVETGTQTRVKLDGGGTALSDYPTTEADKGLRVNVGVRPEDFVPTEDTPIYSGKVEITEALGEVTLLYFQAEGGGDPVIGKLPGIHREMRGKQVSLGAEPDKVHLFAEGVSLLYR 362
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Match: UPI001C98C7BC (sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC n=2 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C98C7BC) HSP 1 Score: 301 bits (770), Expect = 1.060e-99 Identity = 150/183 (81.97%), Postives = 167/183 (91.26%), Query Frame = 1 Query: 1 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGARTTIKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 549 LKEQMPDRTMIYVTHDQVEAMTLA+RIVVLANKGIAQVG+PLELYERPNSEFVAQFIGSP+MNLLPGEV+ TG +TT+KL GGGTA+SDYPT+ ADMGL VNVG+RPEDFVAA+ FSG V+I+EALGEVTLLYF+ +G +PVIAKLPGIH +MRGKTV+L AAPEKVHLFA GVSLLYR Sbjct: 180 LKEQMPDRTMIYVTHDQVEAMTLASRIVVLANKGIAQVGSPLELYERPNSEFVAQFIGSPSMNLLPGEVVGTGTQTTVKLAGGGTAVSDYPTTDADMGLAVNVGIRPEDFVAADSGEAFSGMVDIVEALGEVTLLYFKHAEGVEPVIAKLPGIHEDMRGKTVALTAAPEKVHLFAGGVSLLYR 362
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Match: A0A238K210_9RHOB (Maltose/maltodextrin import ATP-binding protein MalK n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238K210_9RHOB) HSP 1 Score: 299 bits (765), Expect = 6.050e-99 Identity = 150/183 (81.97%), Postives = 163/183 (89.07%), Query Frame = 1 Query: 1 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGARTTIKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 549 LKE MPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVG+PLELYERPNSEFVAQFIGSPAMNLLPGEV+ TG RTT+++EGGG A+S YPT+ AD GLRVNVGVRPEDF+A EGEA+++G V I EALGEVTLLYF + V AKLPGIH EMRG+TVSLGAAPEKVHLFADGVSLLYR Sbjct: 180 LKESMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGSPLELYERPNSEFVAQFIGSPAMNLLPGEVVETGERTTVRMEGGGIAVSQYPTTAADKGLRVNVGVRPEDFLATEGEAIYTGKVGITEALGEVTLLYFGGEGATAQVTAKLPGIHREMRGRTVSLGAAPEKVHLFADGVSLLYR 362
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Match: A0A0W7WMZ2_9RHOB (ABC transporter ATP-binding protein n=1 Tax=Ponticoccus marisrubri TaxID=1685382 RepID=A0A0W7WMZ2_9RHOB) HSP 1 Score: 296 bits (759), Expect = 4.920e-98 Identity = 146/183 (79.78%), Postives = 164/183 (89.62%), Query Frame = 1 Query: 1 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGARTTIKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 549 LKEQMPDRTMIYVTHDQVEAMTLA+RIVVLANKGIAQVG+PLELYERPNSEFVAQFIGSP+MNLLPGE++ATGA+TT+KLEGGGTA+SDYP+ DMG +VNVGVRPEDF A EG A++ G V+I EALGEVTLLYFE G DPVIAKLPGIH EMRG+ V+L A+ +KVHLFADG S+LYR Sbjct: 180 LKEQMPDRTMIYVTHDQVEAMTLASRIVVLANKGIAQVGSPLELYERPNSEFVAQFIGSPSMNLLPGEIVATGAQTTVKLEGGGTAVSDYPSEAGDMGRKVNVGVRPEDFTATEGAALYKGRVDITEALGEVTLLYFEKTGGADPVIAKLPGIHREMRGRDVALTASSDKVHLFADGTSMLYR 362
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Match: A3JYR9_9RHOB (ABC transporter related protein n=2 Tax=Sagittula TaxID=58842 RepID=A3JYR9_9RHOB) HSP 1 Score: 293 bits (749), Expect = 1.610e-96 Identity = 149/183 (81.42%), Postives = 161/183 (87.98%), Query Frame = 1 Query: 1 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGARTTIKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 549 LKE MPDRTMIYVTHDQVEAMTLA+RIVVLANKGIAQVG PLELYERPN EFVAQFIGSP+MNLLPGEVIATGA+TT++L GGGTA+S+ PT ADMGL+V VG+RPEDF GEAVFSG V I EALGEVTLLYF A++G DPVIAKLPGIH MRG+TV L A PEKVHLFADGVSLLYR Sbjct: 180 LKESMPDRTMIYVTHDQVEAMTLASRIVVLANKGIAQVGTPLELYERPNGEFVAQFIGSPSMNLLPGEVIATGAQTTVRLAGGGTAVSNVPTKDADMGLKVKVGIRPEDFTQTTGEAVFSGEVAITEALGEVTLLYFVAEKGEDPVIAKLPGIHTGMRGQTVPLTAVPEKVHLFADGVSLLYR 362
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Match: UPI000EF5537B (sn-glycerol-3-phosphate ABC transporter ATP-binding protein UgpC n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF5537B) HSP 1 Score: 293 bits (749), Expect = 1.610e-96 Identity = 146/183 (79.78%), Postives = 160/183 (87.43%), Query Frame = 1 Query: 1 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGARTTIKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 549 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVG PL+LYERPNSEFVAQFIGSP+MNLLPGEVI TGA+T +KL GGG ALSDYPT+ ADMGL+V VG+RPEDFV +G+ + GTV+I EALGEVTLLYF+ +PVIAKLPGIH EMRGKTV+L A P KVHLFADGVSL YR Sbjct: 180 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGTPLDLYERPNSEFVAQFIGSPSMNLLPGEVIGTGAQTRVKLAGGGEALSDYPTTDADMGLKVKVGIRPEDFVMTDGQGSYQGTVDITEALGEVTLLYFQTDGSAEPVIAKLPGIHREMRGKTVALSADPSKVHLFADGVSLHYR 362
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Match: A0A1M5QI03_9RHOB (Maltose ABC transporter ATP-binding protein /trehalose ABC transporter ATP-binding protein /sucrose ABC transporter ATP-binding protein n=6 Tax=Marivita TaxID=659428 RepID=A0A1M5QI03_9RHOB) HSP 1 Score: 291 bits (744), Expect = 9.230e-96 Identity = 143/183 (78.14%), Postives = 163/183 (89.07%), Query Frame = 1 Query: 1 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGARTTIKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 549 LKEQMP+ TMIYVTHDQVEAMTLA+RIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSP+MNLLPGE++ TG +TTIK++ GGTA+SDYPT+ ADMGL+VNVGVRPEDF+ +GE +F G VNI EALGEVTLLYFE Q GD VI KLPGIH E+RGK+V LGA+P+KVH+F +G SLLYR Sbjct: 180 LKEQMPESTMIYVTHDQVEAMTLASRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPSMNLLPGEIVGTGQQTTIKMDRGGTAVSDYPTTDADMGLKVNVGVRPEDFLETDGEHIFEGKVNITEALGEVTLLYFEKQGDGDAVIGKLPGIHAELRGKSVKLGASPDKVHVFHNGTSLLYR 362
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Match: A0A0P1G615_9RHOB (Maltose/maltodextrin import ATP-binding protein MalK n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1G615_9RHOB) HSP 1 Score: 290 bits (743), Expect = 1.310e-95 Identity = 144/183 (78.69%), Postives = 163/183 (89.07%), Query Frame = 1 Query: 1 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGARTTIKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 549 LKEQMPDRTMIYVTHDQVEAMTLA+RIVVLANKGIAQVG PLELYERPNSEFVAQFIGSP+MNLLPGEVIATGA+TT++L GGG A+SDYPT+ AD+GL+VNVG+RPEDF+ + + F+GTV+IIEALGEVTLLYFE G V+AKLPGIH +MRGK+V L A P+KVHLFADGVSL YR Sbjct: 180 LKEQMPDRTMIYVTHDQVEAMTLASRIVVLANKGIAQVGTPLELYERPNSEFVAQFIGSPSMNLLPGEVIATGAQTTVQLAGGGRAVSDYPTTEADLGLKVNVGIRPEDFIPTDADPAFTGTVDIIEALGEVTLLYFERGDHGAAVVAKLPGIHQDMRGKSVQLTAMPDKVHLFADGVSLRYR 362
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Match: A0A238KYI1_9RHOB (Maltose/maltodextrin import ATP-binding protein MalK n=1 Tax=Pelagimonas varians TaxID=696760 RepID=A0A238KYI1_9RHOB) HSP 1 Score: 287 bits (734), Expect = 3.030e-94 Identity = 144/183 (78.69%), Postives = 160/183 (87.43%), Query Frame = 1 Query: 1 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAQFIGSPAMNLLPGEVIATGARTTIKLEGGGTALSDYPTSGADMGLRVNVGVRPEDFVAAEGEAVFSGTVNIIEALGEVTLLYFEAQQGGDPVIAKLPGIHHEMRGKTVSLGAAPEKVHLFADGVSLLYR 549 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVG+PLELYERPNSEFVAQFIGSPAMNL+PGEV+ TG +T +KLEGGG LSDYPT+ ADMGL+VNVGVRPEDFV AE + +F+G V+I EALGEVTLLYF + +G VIAKLPGIH EMRG+ V+L P+KVHLFA G SLLYR Sbjct: 180 LKEQMPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGSPLELYERPNSEFVAQFIGSPAMNLIPGEVVGTGTQTRVKLEGGGETLSDYPTTDADMGLKVNVGVRPEDFVMAEDQMIFTGKVSITEALGEVTLLYFGSPEGEHSVIAKLPGIHLEMRGREVALTTTPDKVHLFAAGTSLLYR 362 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10229.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10229.1.1 >prot_C-australica_Contig_10229.1.1 ID=prot_C-australica_Contig_10229.1.1|Name=mRNA_C-australica_Contig_10229.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=180bp MPDRTMIYVTHDQVEAMTLATRIVVLANKGIAQVGAPLELYERPNSEFVAback to top mRNA from alignment at C-australica_Contig_10229:281..832- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10229.1.1 ID=mRNA_C-australica_Contig_10229.1.1|Name=mRNA_C-australica_Contig_10229.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=552bp|location=Sequence derived from alignment at C-australica_Contig_10229:281..832- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10229:281..832- >mRNA_C-australica_Contig_10229.1.1 ID=mRNA_C-australica_Contig_10229.1.1|Name=mRNA_C-australica_Contig_10229.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=540bp|location=Sequence derived from alignment at C-australica_Contig_10229:281..832- (Chrysoparadoxa australica CS_1217)back to top |