Homology
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Match:
A0A222E0Y2_9RHOB (Prephenate dehydrogenase n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E0Y2_9RHOB)
HSP 1 Score: 529 bits (1363), Expect = 3.200e-189
Identity = 265/272 (97.43%), Postives = 269/272 (98.90%), Query Frame = 1
Query: 1 MSVIYPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIGLGDEVVDSLVDAVRDADLVVLATPVGVMGRIAEEIAPYLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPGEDADPEAVARVQAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGEQ 816
MSVIYPRVAL+GLGLIASSMFWAMKRGGLADHV GYARSEDTR TARRIGLGDEVVD+LVDAVRDADLVVLATPVGVMGRIAEEIAP+LKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVP EDADPEAVARV+AYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGEQ
Sbjct: 1 MSVIYPRVALIGLGLIASSMFWAMKRGGLADHVMGYARSEDTRETARRIGLGDEVVDTLVDAVRDADLVVLATPVGVMGRIAEEIAPHLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPVEDADPEAVARVEAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGEQ 272
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Match:
A0A0B3SQ56_9RHOB (Cyclohexadienyl dehydrogenase n=6 Tax=Mameliella TaxID=1434019 RepID=A0A0B3SQ56_9RHOB)
HSP 1 Score: 491 bits (1265), Expect = 2.740e-174
Identity = 242/272 (88.97%), Postives = 259/272 (95.22%), Query Frame = 1
Query: 1 MSVIYPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIGLGDEVVDSLVDAVRDADLVVLATPVGVMGRIAEEIAPYLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPGEDADPEAVARVQAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGEQ 816
M+VIY RVAL+GLGLIASSMFWAMKRGG+A HVTGYARS++TR TARRIGL DEV DSLVDAVRDADLVVLATPVGVMGR+AEEIAP+LKPGATVIDVGSVKRTVIEEVGPHIP GV FVPCHPMAGTEHSGPEAGF++LFDNRWCL+VP E +DP V R+QAYWQA+G+NTEVM+ EHHDLVCAVVSH+PHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNK+ATIEILGRFTEELMALQRAIRTGDGEQ
Sbjct: 1 MTVIYERVALIGLGLIASSMFWAMKRGGVAGHVTGYARSDETRETARRIGLCDEVCDSLVDAVRDADLVVLATPVGVMGRVAEEIAPHLKPGATVIDVGSVKRTVIEEVGPHIPEGVHFVPCHPMAGTEHSGPEAGFSTLFDNRWCLIVPVEGSDPAEVERMQAYWQALGSNTEVMDAEHHDLVCAVVSHIPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKDATIEILGRFTEELMALQRAIRTGDGEQ 272
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Match:
UPI001C479A05 (prephenate/arogenate dehydrogenase family protein n=1 Tax=Roseobacteraceae TaxID=2854170 RepID=UPI001C479A05)
HSP 1 Score: 476 bits (1226), Expect = 2.390e-168
Identity = 232/272 (85.29%), Postives = 255/272 (93.75%), Query Frame = 1
Query: 1 MSVIYPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIGLGDEVVDSLVDAVRDADLVVLATPVGVMGRIAEEIAPYLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPGEDADPEAVARVQAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGEQ 816
M+VIY +VAL+GLGLIASSMFWAMKRGG+A VTGYARS +TR TARRIGL D +VDS +AV+DADLVVLATPVGVMGR+AE IAP+LKPGATVIDVGSVKRTVI EVGPHIP GV FVPCHPMAGTEHSGPEAGF +LFDNRWCL+VP +DA+ EAV R+++YWQA+G+NTE+M+PEHHDLVCAVVSH+PHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNK+ATIEILGRFTEELMALQRAIRTGDGEQ
Sbjct: 1 MTVIYQKVALIGLGLIASSMFWAMKRGGVAGQVTGYARSAETRDTARRIGLCDHIVDSAEEAVKDADLVVLATPVGVMGRVAEAIAPHLKPGATVIDVGSVKRTVIAEVGPHIPEGVHFVPCHPMAGTEHSGPEAGFETLFDNRWCLIVPVDDAEAEAVQRIESYWQALGSNTEIMDPEHHDLVCAVVSHIPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKDATIEILGRFTEELMALQRAIRTGDGEQ 272
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Match:
A0A238JNI0_9RHOB (Cyclohexadienyl dehydrogenase n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238JNI0_9RHOB)
HSP 1 Score: 474 bits (1220), Expect = 1.960e-167
Identity = 237/272 (87.13%), Postives = 251/272 (92.28%), Query Frame = 1
Query: 1 MSVIYPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIGLGDEVVDSLVDAVRDADLVVLATPVGVMGRIAEEIAPYLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPGEDADPEAVARVQAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGEQ 816
MSVIY RVAL+GLGLIASSMFWAMKRGGLA HVTGYARSE TR TARRIGL D VVDS AV+DADLVVLA PVGVMG +AE IAP+LKPGATVIDVGSVK+TVI+EVGPHIP GV FVPCHPMAGTEHSGPE+GF SLFDNRWCLVVP E +D +AV RV+AYW+A+G+NTEVMEP HHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEAT+EILGRFTEEL ALQRAIRTGDGEQ
Sbjct: 1 MSVIYERVALIGLGLIASSMFWAMKRGGLAGHVTGYARSEATRDTARRIGLCDRVVDSAEAAVKDADLVVLAVPVGVMGALAEAIAPHLKPGATVIDVGSVKQTVIDEVGPHIPEGVHFVPCHPMAGTEHSGPESGFESLFDNRWCLVVPSEGSDEDAVLRVRAYWRALGSNTEVMEPGHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATLEILGRFTEELFALQRAIRTGDGEQ 272
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Match:
S9QT15_9RHOB (Cyclohexadienyl dehydrogenase n=1 Tax=Salipiger mucosus DSM 16094 TaxID=1123237 RepID=S9QT15_9RHOB)
HSP 1 Score: 447 bits (1150), Expect = 8.040e-157
Identity = 220/267 (82.40%), Postives = 240/267 (89.89%), Query Frame = 1
Query: 13 YPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIGLGDEVVDSLVDAVRDADLVVLATPVGVMGRIAEEIAPYLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPGEDADPEAVARVQAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGE 813
YPRVAL+GLGLIASSMFWAM+R G+ HV GYARS +TR TARRIGL D + DSL + V+DADLVVLATPVGVMGR+AE IAP+LKPGATV DVGSVK+ VIE VGPH+P V FVP HPMAGTEHSGPEAGFA LFDNRWCL+VP E AD AVAR++A+W+A+GANTE M+ EHHDLVCAVVSH+PHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEAT+EILGRFTEEL ALQRAIRTGDGE
Sbjct: 3 YPRVALIGLGLIASSMFWAMRRAGMQGHVAGYARSAETRETARRIGLCDSICDSLEEVVKDADLVVLATPVGVMGRVAETIAPHLKPGATVTDVGSVKKAVIEAVGPHLPESVHFVPAHPMAGTEHSGPEAGFAQLFDNRWCLIVP-ESADEAAVARLEAFWRALGANTERMDVEHHDLVCAVVSHIPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATLEILGRFTEELFALQRAIRTGDGE 268
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Match:
UPI0010A6050B (prephenate/arogenate dehydrogenase family protein n=1 Tax=Primorskyibacter sp. XY-301 TaxID=2562685 RepID=UPI0010A6050B)
HSP 1 Score: 441 bits (1133), Expect = 3.470e-154
Identity = 216/268 (80.60%), Postives = 240/268 (89.55%), Query Frame = 1
Query: 13 YPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIGLGDEVVDSLVDAVRDADLVVLATPVGVMGRIAEEIAPYLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPGEDADPEAVARVQAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGEQ 816
Y +VAL+GLGLIASSMFWAMKRG +A+ V+GYARS ++R TARRIGL DEV +S +AV+DADL+VLA PVG MG +A+EI P+LK GATV DVGSVK TVIE VGPHIP GV FVP HPMAGTEHSGPE+GFA+LFDNRWCL+VP E ++ EAV R+++YWQ +GANTE ME HHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNK+ATIEILGRFTEELMALQRAIRTGDGEQ
Sbjct: 5 YKKVALIGLGLIASSMFWAMKRGSVAETVSGYARSPESRETARRIGLCDEVCESAAEAVKDADLIVLAVPVGAMGAVAKEIEPHLKAGATVTDVGSVKETVIEAVGPHIPDGVHFVPAHPMAGTEHSGPESGFATLFDNRWCLIVPAEGSEDEAVVRLESYWQELGANTERMEVAHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKQATIEILGRFTEELMALQRAIRTGDGEQ 272
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Match:
A3K2Q1_9RHOB (Cyclohexadienyl dehydrogenase n=2 Tax=Sagittula TaxID=58842 RepID=A3K2Q1_9RHOB)
HSP 1 Score: 440 bits (1132), Expect = 4.920e-154
Identity = 219/272 (80.51%), Postives = 240/272 (88.24%), Query Frame = 1
Query: 1 MSVIYPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIGLGDEVVDSLVDAVRDADLVVLATPVGVMGRIAEEIAPYLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPGEDADPEAVARVQAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGEQ 816
MS Y +VAL+GLGLIASSM WAMKR G+A + GYARS +TR TARR+G D + DS DAV DADLVVLATPVGVMGR+AE IAP+LKPGATV DVGSVKRTVIEEV P++P V FVP HPMAGTEHSGP+AGFASLFDNRWCL+VP E+A +AVAR++ YWQA+GANTE M+PEHHDLVCAVVSH+PHLIAYTMVGVADDL RVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNK AT+EILGRFTEEL ALQRAIRTGDGEQ
Sbjct: 1 MSEHYGKVALIGLGLIASSMAWAMKRAGMATEIRGYARSAETRETARRLGFCDVICDSAEDAVADADLVVLATPVGVMGRVAETIAPHLKPGATVTDVGSVKRTVIEEVSPYLPETVHFVPAHPMAGTEHSGPDAGFASLFDNRWCLIVPVENAPEDAVARLERYWQALGANTERMDPEHHDLVCAVVSHIPHLIAYTMVGVADDLSRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKGATLEILGRFTEELFALQRAIRTGDGEQ 272
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Match:
A0A7G2TTN4_9RHOB (Cyclohexadienyl dehydrogenase n=12 Tax=Rhodobacterales TaxID=204455 RepID=A0A7G2TTN4_9RHOB)
HSP 1 Score: 440 bits (1132), Expect = 5.480e-154
Identity = 219/267 (82.02%), Postives = 238/267 (89.14%), Query Frame = 1
Query: 13 YPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIGLGDEVVDSLVDAVRDADLVVLATPVGVMGRIAEEIAPYLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPGEDADPEAVARVQAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGE 813
Y RVAL+GLGLIASSMFWAM+R G+ HVTGYARSE+TR TARRIGL D V DS +AV+DADLVVLA PVG MGR+AE IAPYLKPG TV DVGSVK+ VIE VGPHIP GV FVP HPMAGTEHSGPE+GFASLFDNRWCL+VP + A EA R++AYW+A+GANT+ ME EHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEA++EILGRFTEEL ALQRAIRTGDG+
Sbjct: 3 YRRVALIGLGLIASSMFWAMRRAGMDAHVTGYARSEETRETARRIGLCDTVCDSAEEAVKDADLVVLAVPVGAMGRVAEAIAPYLKPGCTVTDVGSVKKAVIEAVGPHIPEGVDFVPAHPMAGTEHSGPESGFASLFDNRWCLIVP-DGAREEATDRLEAYWRALGANTQRMEVEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEASLEILGRFTEELFALQRAIRTGDGD 268
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Match:
A0A254RCT7_9RHOB (Cyclohexadienyl dehydrogenase n=1 Tax=Oceanicola sp. 22II-s10i TaxID=1317116 RepID=A0A254RCT7_9RHOB)
HSP 1 Score: 439 bits (1129), Expect = 1.360e-153
Identity = 222/271 (81.92%), Postives = 239/271 (88.19%), Query Frame = 1
Query: 1 MSVIYPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIGLGDEVVDSLVDAVRDADLVVLATPVGVMGRIAEEIAPYLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPGEDADPEAVARVQAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGE 813
M+ +Y RVAL+GLGLIASSMFWAMKRGG+A VTGYARSE TR TARRIGL D V DS +AV ADLVVL PVG MG +AE IAP+LKPGATVIDVGSVK++VI+ VGPHIP GV FVP HPMAGTEHSGPE+GFA LFDNRWCLVVPG DAD AVA V+AYWQA+GANTE ME HHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFL+NK+A +EILGRFTEEL ALQRAIRTGDG+
Sbjct: 1 MAQVYGRVALIGLGLIASSMFWAMKRGGVAGEVTGYARSEATRETARRIGLCDRVFDSAEEAVEGADLVVLCVPVGAMGPVAEAIAPHLKPGATVIDVGSVKQSVIDAVGPHIPEGVHFVPTHPMAGTEHSGPESGFAELFDNRWCLVVPG-DADEAAVAAVEAYWQALGANTERMEVGHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLSNKDAALEILGRFTEELFALQRAIRTGDGD 270
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Match:
A0A1G8I8X3_9RHOB (Cyclohexadieny/prephenate dehydrogenase n=4 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A1G8I8X3_9RHOB)
HSP 1 Score: 437 bits (1123), Expect = 1.040e-152
Identity = 215/267 (80.52%), Postives = 238/267 (89.14%), Query Frame = 1
Query: 13 YPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIGLGDEVVDSLVDAVRDADLVVLATPVGVMGRIAEEIAPYLKPGATVIDVGSVKRTVIEEVGPHIPAGVQFVPCHPMAGTEHSGPEAGFASLFDNRWCLVVPGEDADPEAVARVQAYWQAMGANTEVMEPEHHDLVCAVVSHVPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKEATIEILGRFTEELMALQRAIRTGDGE 813
YPRVAL+GLGLIASSMFWAMKR G+ HVTGYARS+ TR TARR+GL EV DS+ +AVRDADLVVLA PVG MG +AE +AP+LKPG TV DVGSVK+ VI+ V PH+P GV+FVP HPMAGTEHSGP+AGFASL+DNRWCL+VP E A +A AR++AYWQA+GANTE ME EHHDLVCAVVSH+PHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNK AT+EILGRFTEEL ALQRAIRTGDG+
Sbjct: 3 YPRVALLGLGLIASSMFWAMKRAGMDSHVTGYARSQATRDTARRLGLCHEVCDSVAEAVRDADLVVLAVPVGAMGELAEAMAPHLKPGCTVTDVGSVKQAVIDAVRPHLPEGVEFVPAHPMAGTEHSGPDAGFASLYDNRWCLIVP-EGASEQATARLEAYWQALGANTERMEVEHHDLVCAVVSHIPHLIAYTMVGVADDLRRVSDQEVIKFSAAGFRDFTRIAASDPTMWRDVFLTNKPATLEILGRFTEELFALQRAIRTGDGQ 268
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10226.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 3.20e-189 / Id = 97.43 Expect = 2.74e-174 / Id = 88.97 Expect = 2.39e-168 / Id = 85.29 Expect = 1.96e-167 / Id = 87.13 Expect = 8.04e-157 / Id = 82.40 Expect = 3.47e-154 / Id = 80.60 Expect = 4.92e-154 / Id = 80.51 Expect = 5.48e-154 / Id = 82.02 Expect = 1.36e-153 / Id = 81.92 Expect = 1.04e-152 / Id = 80.52 Sequence A0A222E0Y2_9RHOB A0A0B3SQ56_9RHOB UPI001C479A05 A0A238JNI0_9RHOB S9QT15_9RHOB UPI0010A6050B A3K2Q1_9RHOB A0A7G2TTN4_9RHOB A0A254RCT7_9RHOB A0A1G8I8X3_9RHOB Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 1 Seed ortholog 1123237.Salmuc_05156 Preferred name tyrC PFAMs PDH Model size 816 Max annot lvl 28211|Alphaproteobacteria KEGG rclass RC00125 KEGG ko ko:K00210,ko:K00220,ko:K04517 KEGG Reaction R00732,R01728 KEGG Pathway ko00400,ko00401,ko01100,ko01110,ko01130,ko01230,map00400,map00401,map01100,map01110,map01130,map01230 KEGG Module M00025,M00040 Hectar predicted targeting category signal peptide GOs GO:0000166,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0006082,GO:0006520,GO:0006570,GO:0006571,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0008977,GO:0009058,GO:0009072,GO:0009073,GO:0009095,GO:0009987,GO:0016053,GO:0016491,GO:0016627,GO:0016628,GO:0019438,GO:0019752,GO:0036094,GO:0042802,GO:0042803,GO:0043167,GO:0043168,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0046394,GO:0046983,GO:0047794,GO:0048037,GO:0050662,GO:0051287,GO:0055114,GO:0070403,GO:0071704,GO:0097159,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607 Exons 1 Evalue 1.32e-157 EggNOG OGs COG0287@1|root,COG0287@2|Bacteria,1QTZA@1224|Proteobacteria,2TS12@28211|Alphaproteobacteria EC 1.3.1.12,1.3.1.43 Description prephenate dehydrogenase Cds size 816 COG category E BRITE ko00000,ko00001,ko00002,ko01000
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586760.21329-CDS-C-australica_Contig_10226:2..818 1682586760.21329-CDS-C-australica_Contig_10226:2..818 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_10226 3..818 -
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10226.1.1
>prot_C-australica_Contig_10226.1.1 ID=prot_C-australica_Contig_10226.1.1|Name=mRNA_C-australica_Contig_10226.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=272bp
MSVIYPRVALVGLGLIASSMFWAMKRGGLADHVTGYARSEDTRATARRIG back to top mRNA from alignment at C-australica_Contig_10226:3..818-
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10226.1.1 ID=mRNA_C-australica_Contig_10226.1.1|Name=mRNA_C-australica_Contig_10226.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=816bp|location=Sequence derived from alignment at C-australica_Contig_10226:3..818- (Chrysoparadoxa australica CS_1217)ATGAGTGTGATTTATCCCCGCGTGGCACTGGTTGGGCTCGGGCTGATTGC
CTCGTCGATGTTCTGGGCGATGAAGCGTGGCGGTCTGGCGGACCACGTCA
CCGGCTATGCCCGGTCTGAAGACACGCGCGCGACGGCGCGACGGATCGGT
TTGGGCGATGAGGTGGTCGACTCTTTGGTCGATGCTGTGCGCGATGCCGA
TCTGGTGGTTCTGGCCACCCCGGTGGGCGTCATGGGGCGCATCGCCGAAG
AGATTGCGCCGTATCTGAAACCGGGGGCCACGGTAATCGACGTCGGTAGT
GTCAAGCGCACGGTGATCGAAGAGGTCGGACCGCATATTCCGGCGGGCGT
GCAATTTGTCCCCTGTCACCCCATGGCAGGGACAGAGCATTCCGGGCCGG
AGGCGGGCTTTGCCTCACTTTTTGACAATAGGTGGTGCCTTGTCGTGCCG
GGCGAGGACGCCGATCCCGAAGCCGTTGCGCGGGTCCAGGCCTATTGGCA
GGCGATGGGCGCCAACACAGAGGTGATGGAGCCAGAGCACCACGACCTTG
TTTGTGCCGTGGTCAGCCATGTGCCGCACCTGATTGCCTATACAATGGTG
GGTGTGGCTGACGATTTGCGGCGTGTCTCCGATCAGGAAGTGATCAAGTT
CTCAGCAGCGGGTTTCCGCGATTTCACCCGGATCGCGGCTAGCGATCCGA
CCATGTGGCGCGACGTGTTTCTGACCAACAAGGAGGCCACGATCGAGATC
CTTGGCCGTTTTACCGAAGAGCTGATGGCGTTGCAGCGGGCCATTCGAAC
CGGCGATGGTGAGCAG back to top Coding sequence (CDS) from alignment at C-australica_Contig_10226:3..818-
>mRNA_C-australica_Contig_10226.1.1 ID=mRNA_C-australica_Contig_10226.1.1|Name=mRNA_C-australica_Contig_10226.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=816bp|location=Sequence derived from alignment at C-australica_Contig_10226:3..818- (Chrysoparadoxa australica CS_1217) back to top