Homology
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Match:
D8LC27_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC27_ECTSI)
HSP 1 Score: 102 bits (254), Expect = 1.770e-21
Identity = 76/169 (44.97%), Postives = 95/169 (56.21%), Query Frame = 1
Query: 211 VDYEALKASAGVSEKGGEISMSVEETNKIRAELGLKPLNLG------PSKDDKAVENMRLKKEAEDAQLAAREVEKRLDKARRKRLLNEKLQGETLGQPAEGGG---SAADWVKKSXXXXXXXXXXXXXXXXXXXXXAEQ---------DDAG---TAYGADDLTGLKV 654
VD E +K + E GEISMSVEETN++RA LGLKPLN+G P++++ AVENMRLK+E E+ +E+E RL KAR KR LNEKL+G+TLG+ G SAADWV +S EQ D G AYGA++L GLKV
Sbjct: 120 VDVEKIKPNT--EENKGEISMSVEETNRVRAMLGLKPLNVGGSASGKPTEEEIAVENMRLKREEEEQARELKELETRLQKARTKRQLNEKLKGDTLGEVKPGDEEVVSAADWVNRSRKKAVAMEEERLLARQRERILEEQEMELANGGGDGDGRRKAAYGAENLAGLKV 286
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Match:
A0A836C9M6_9STRA (SART-1 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9M6_9STRA)
HSP 1 Score: 95.9 bits (237), Expect = 3.140e-19
Identity = 61/113 (53.98%), Postives = 79/113 (69.91%), Query Frame = 1
Query: 205 GEVDYEALKASAGVSEKGGEISMSVEETNKIRAELGLKPLNLGPSKDDKAVENMRLKKEAEDAQLAAREVEKRLDKARRKRLLNEKLQGETLG--QPAEGGG--SAADWVKKS 531
G+V YE +K + VSE GEISMS+EETN++RA LGL+PL +G SK+ +AV+N+R KKE E ++E RL KAR +R L+E+L+G TLG Q E G SAADWV KS
Sbjct: 73 GDVVYEKIKPA--VSESNGEISMSIEETNRVRAMLGLRPLAVGNSKEQQAVDNLRRKKEEEAKVRELADIEARLAKARNRRQLHERLKGSTLGEVQAGEDGSVLSAADWVGKS 183
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Match:
A0A7S3URM7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3URM7_HETAK)
HSP 1 Score: 88.6 bits (218), Expect = 1.320e-17
Identity = 55/99 (55.56%), Postives = 69/99 (69.70%), Query Frame = 1
Query: 256 GGEISMSVEETNKIRAELGLKPLNLGP----SKDDKAVENMRLKKEAEDAQLAAREVEKRLDKARRKRLLNEKLQGETLGQPAEGG---GSAADWVKKS 531
G E+S S+EETN+IRA LGLKPL L S + AV+NMR KKE E Q E+E R+ +AR+KR LNEKL+G+ LG+ AEG GSAADWV++S
Sbjct: 1 GEEVSCSIEETNRIRAALGLKPLKLEKGDEQSAEQIAVDNMRKKKEEEGRQRELAEIEARIARARKKRALNEKLEGKRLGELAEGEQEIGSAADWVRRS 99
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Match:
K3X7K2_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X7K2_GLOUD)
HSP 1 Score: 85.9 bits (211), Expect = 7.150e-16
Identity = 47/100 (47.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 238 AGVSEKGGEISMSVEETNKIRAELGLKPLNLGPSKDDKAVENMRLKKEAEDAQLAAREVEKRLDKARRKRLLNEKLQGETLGQP--AEGGGSAADWVKKS 531
A EK GEISMS+EETN++RA LGLKPL+LGP K D V N++ E D + A +++K++ ++++KR L +KL G+++G+ A SA DWVK+S
Sbjct: 101 ANTVEKNGEISMSIEETNRVRAALGLKPLSLGPKKKDANVVNLQKTSEQVDEERAREDLQKKIAQSKKKRELTQKLAGQSIGEQLKASASSSALDWVKQS 200
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Match:
A0A833WBH8_PHYIN (SART-1 family n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833WBH8_PHYIN)
HSP 1 Score: 76.3 bits (186), Expect = 1.740e-12
Identity = 42/105 (40.00%), Postives = 70/105 (66.67%), Query Frame = 1
Query: 238 AGVSEKGGEISMSVEETNKIRAELGLKPLNLGPSKDDKAVENMRLKKEAEDAQLAAREVEKRLDKARRKRLLNEKLQGETLGQPAEG-------GGSAADWVKKS 531
A +K GEIS+S+EETNK+R LGLKPL++GPSK +++V N++ DA+ +E++K+L +++ +R L +K+ G++LG+ + G A +WVK+S
Sbjct: 22 ASSEDKSGEISLSIEETNKLRISLGLKPLSVGPSKKEQSVVNVQKTSAQLDAERKQQELKKKLQQSKTRRELTQKIAGKSLGEQLKADLEAQKKGNDALEWVKQS 126
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Match:
A0A8K1CWD9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CWD9_PYTOL)
HSP 1 Score: 76.3 bits (186), Expect = 1.770e-12
Identity = 62/138 (44.93%), Postives = 88/138 (63.77%), Query Frame = 1
Query: 247 SEKGGEISMSVEETNKIRAELGLKPLNLGPSKDDKAVENMRLKKEAEDAQLAAREVEKRLDKARRKRLLNEKLQGETLGQPAE--GGGSAADWVKKSXXXXXXXXXXXXXXXXXXXXXAEQDDAGTAYGADDLTGLKV 654
+E+ GEISMS+EETNK+R LGLKPL++GP K+ V N++ E + E++K L+++RRKR L +KL G+++GQ + SA DWVK+S XXXXXXXXXX +++ GT+Y A L G+ V
Sbjct: 85 TEENGEISMSIEETNKLRISLGLKPLSVGPKKEKNLV-NLQKTSEQLAEEKERDEIKKALEQSRRKRELTQKLAGKSIGQELKESAASSALDWVKQSRQSAAQXXXXXXXXXXK-----QKEAEGTSYDASALAGMTV 216
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Match:
A0A7S1XUI2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUI2_9STRA)
HSP 1 Score: 73.2 bits (178), Expect = 1.120e-11
Identity = 57/141 (40.43%), Postives = 74/141 (52.48%), Query Frame = 1
Query: 238 AGVSEKGGEISMSVEETNKIRAELGLKPLNLGP--SKDDKAVENMRLKKEAEDAQLAAREVEKRLDKARRKRLLNEKLQGETLGQPAEGGGSAADWVKKSXXXXXXXXXXXXXXXXXXXXXAEQDDAGTAYGADDLTGLKV 654
A V+EKGGEIS SVEETN++RA LGLKPL G SKD+ AVEN + KE E A+ A+E R N K++G TLG +G S A WV++S A + + G Y + DL G++V
Sbjct: 12 AQVTEKGGEISASVEETNRVRALLGLKPLRTGKEKSKDEIAVENFKRVKEEEAAKKRAQEAXXXXXXXXXXRERNAKIEGPTLGDGDDGVSSVA-WVQRSRAKAKEQEARKKEALER----AAKGEVGADYTSSDLVGMEV 147
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Match:
A0A7S1CFK3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CFK3_9STRA)
HSP 1 Score: 70.9 bits (172), Expect = 2.690e-11
Identity = 45/94 (47.87%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 238 AGVSEKGGEISMSVEETNKIRAELGLKPL------NLGPSKDDKAVENMRLKKEAEDAQLAAREVEKRLDKARRKRLLNEKLQGETLGQPAEGG 501
A VSE GGE+S S+ ETN+IRA LGLKPL + PSK+++AVE + + E ++E RL +AR+KR LN KLQG++LG+ GG
Sbjct: 128 AQVSEGGGEVSCSIAETNRIRAALGLKPLEGVGGASAQPSKEERAVEEHKTQIEERRRAEERADIEARLARARKKRELNAKLQGQSLGEMLAGG 221
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Match:
A0A329SND0_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SND0_9STRA)
HSP 1 Score: 72.4 bits (176), Expect = 3.660e-11
Identity = 41/101 (40.59%), Postives = 68/101 (67.33%), Query Frame = 1
Query: 250 EKGGEISMSVEETNKIRAELGLKPLNLGPSKDDKAVENMRLKKEAEDAQLAAREVEKRLDKARRKRLLNEKLQGETLGQPAEG-------GGSAADWVKKS 531
+K GEIS+S+EETNK+R LGLKPL++GPSK ++AV +++ DA+ + ++K+L +++ +R L +KL G++LG+ + G A +WVK+S
Sbjct: 51 DKSGEISLSIEETNKLRISLGLKPLSVGPSKKEQAVVSVQKTSAQLDAEREQQALKKKLQQSKTRRELTQKLAGKSLGEQLKADLEAEKKGHDALEWVKQS 151
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Match:
A0A7S1E0I7_HEMAN (Hypothetical protein (Fragment) n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E0I7_HEMAN)
HSP 1 Score: 70.1 bits (170), Expect = 1.320e-10
Identity = 44/103 (42.72%), Postives = 67/103 (65.05%), Query Frame = 1
Query: 244 VSEKGGEISMSVEETNKIRAELGLKPLNLGPSKD------DKAVENMRLKKEAEDAQLAAREVEKRLDKARRKRLLNEK-LQGETLGQPAEGGGSAADWVKKS 531
V++ GGEISMS+EETNK+RA LGLKPL+L PSK D ++ +R K EA DA+ A + K++ +++RL +K + +TLG+ ++ A+WV K+
Sbjct: 10 VTDSGGEISMSIEETNKVRASLGLKPLDLAPSKPLKEGSKDAPIDAVREKAEA-DAEKEAEAMRKKIADMKKQRLSQKKVMSAKTLGEGSDDDDDVANWVSKA 111
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1022.13.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.77e-21 / Id = 44.97 Expect = 3.14e-19 / Id = 53.98 Expect = 1.32e-17 / Id = 55.56 Expect = 7.15e-16 / Id = 47.00 Expect = 1.74e-12 / Id = 40.00 Expect = 1.77e-12 / Id = 44.93 Expect = 1.12e-11 / Id = 40.43 Expect = 2.69e-11 / Id = 47.87 Expect = 3.66e-11 / Id = 40.59 Expect = 1.32e-10 / Id = 42.72 Sequence D8LC27_ECTSI A0A836C9M6_9STRA A0A7S3URM7_HETAK K3X7K2_GLOUD A0A833WBH8_PHYIN A0A8K1CWD9_PYTOL A0A7S1XUI2_9STRA A0A7S1CFK3_9STRA A0A329SND0_9STRA A0A7S1E0I7_HEMAN Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 0 Start 0 Seed ortholog 2880.D8LC27 Preferred name SART1 PFAMs SART-1 Model size 654 Max annot lvl 2759|Eukaryota KEGG ko ko:K01301,ko:K11984,ko:K12811,ko:K12836,ko:K12858 KEGG Pathway ko03040,ko05131,map03040,map05131 KEGG Module M00354 Hectar predicted targeting category other localisation GOs GO:0000375,GO:0000377,GO:0000387,GO:0000398,GO:0000481,GO:0002682,GO:0002684,GO:0002694,GO:0002696,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005737,GO:0005794,GO:0005829,GO:0006139,GO:0006364,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008380,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010604,GO:0010628,GO:0012505,GO:0015030,GO:0016043,GO:0016070,GO:0016071,GO:0016072,GO:0016604,GO:0016607,GO:0019222,GO:0022407,GO:0022409,GO:0022607,GO:0022613,GO:0022618,GO:0030155,GO:0030532,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034622,GO:0034641,GO:0034660,GO:0042254,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0045292,GO:0045580,GO:0045582,GO:0045583,GO:0045585,GO:0045595,GO:0045597,GO:0045619,GO:0045621,GO:0045785,GO:0046483,GO:0046540,GO:0048518,GO:0048522,GO:0050789,GO:0050793,GO:0050794,GO:0050863,GO:0050865,GO:0050867,GO:0050870,GO:0051094,GO:0051239,GO:0051240,GO:0051249,GO:0051251,GO:0060255,GO:0065003,GO:0065007,GO:0070013,GO:0071005,GO:0071011,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0097526,GO:0120114,GO:1901360,GO:1901363,GO:1902105,GO:1902107,GO:1902494,GO:1903037,GO:1903039,GO:1903706,GO:1903708,GO:1990904,GO:2000026 Exons 3 Evalue 2.9e-22 EggNOG OGs KOG2217@1|root,KOG2217@2759|Eukaryota EC 3.4.17.21,3.6.4.13 Description maturation of 5S rRNA Cds size 654 COG category S BRITE ko00000,ko00001,ko00002,ko01000,ko01002,ko03041,ko04121
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586759.7610636-CDS-C-australica_Contig_1022:15596..15896 1682586759.7610636-CDS-C-australica_Contig_1022:15596..15896 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1022 15597..15896 + 1682586759.7723024-CDS-C-australica_Contig_1022:16140..16326 1682586759.7723024-CDS-C-australica_Contig_1022:16140..16326 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1022 16141..16326 + 1682586759.7819567-CDS-C-australica_Contig_1022:16517..16685 1682586759.7819567-CDS-C-australica_Contig_1022:16517..16685 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1022 16518..16685 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1022.13.1
>prot_C-australica_Contig_1022.13.1 ID=prot_C-australica_Contig_1022.13.1|Name=mRNA_C-australica_Contig_1022.13.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=218bp
RSRSNDRSRRGKRSRSRSRGRERSRSRSRSRSRGRDRGRDRGRSRDRSYD back to top mRNA from alignment at C-australica_Contig_1022:15597..16685+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1022.13.1 ID=mRNA_C-australica_Contig_1022.13.1|Name=mRNA_C-australica_Contig_1022.13.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1089bp|location=Sequence derived from alignment at C-australica_Contig_1022:15597..16685+ (Chrysoparadoxa australica CS_1217)AGGTCTAGGTCTAATGACCGCAGTAGGCGTGGCAAAAGGTCCCGTTCCCG
GTCCAGGGGAAGAGAGAGATCTAGGTCCAGGTCCAGGTCCAGGTCAAGGG
GCAGGGACCGTGGTAGAGACAGGGGCCGGAGCCGTGATAGGAGCTATGAC
AGGGGCCATGAGAGGTCCCGGTCTCCAGTGAAACGCAAGGCCAAAGTAAT
GGATGGTGAAGTGGACTATGAAGCTCTTAAGGCCTCTGCTGGAGTCTCGG
AGAAGGGGGGAGAGATCAGCATGTCTGTAGAGGAAACGAACAAGATAAGG
GTATGGCCTCAGCTCCCTACTCTCATTCTCCTTTCTCCACAACATGCAGC
ACGACAATAATGTATTTCCTCAGTGCAACCCACCCCGCTGATTACCTCAC
GTAGAGCTATAGTCACATACCAAGTCAGGAATGCATCACATGAAGCTGTT
TCTTCCTGACCTGATCTTGTTGACTTGCCTCTTCTCTCTCTTTCCTTGCC
TTTACTGCATCTCCCTAACCATCATCTCCTACATCCCCTGACAGGCTGAG
CTTGGGCTGAAGCCTCTCAACTTAGGGCCTAGCAAGGATGATAAAGCTGT
GGAAAACATGCGGCTGAAGAAGGAAGCAGAGGACGCCCAGCTAGCAGCAC
GGGAGGTTGAGAAGAGGCTGGATAAAGCCAGAAGGAAGAGGCTGCTGAAC
GAGAAGCTTCAGGGAGAGACTCTGGGGCAG GTATGAGAACTGTGATGGCT
ATGGTAACTGTGATAGTTATTGATAACTATGATAGGAGATGTGCTGCACT
TTTCCCCTTTAAACCTTGATGTGAGTGAGGCTCTTGCAGTGATTCTGCCG
TCACTGCCAAATGTTCCTCTTTCACCAACTCCTTTCAATGCCTTCCTTTA
CTTGCTGGCATTGCATGACAGCCAGCAGAAGGTGGTGGTTCCGCAGCTGA
CTGGGTCAAGAAAAGTCGAGCAGCAGCAGCCAAGCAAAAGGAAGAGAAGC
TGTTGGCGGAGAAGCGGGCATTGCTCCTTGCAGAGCAGGACGATGCTGGT
ACTGCATATGGTGCTGACGATTTGACTGGTTTAAAGGTG back to top Coding sequence (CDS) from alignment at C-australica_Contig_1022:15597..16685+
>mRNA_C-australica_Contig_1022.13.1 ID=mRNA_C-australica_Contig_1022.13.1|Name=mRNA_C-australica_Contig_1022.13.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=654bp|location=Sequence derived from alignment at C-australica_Contig_1022:15597..16685+ (Chrysoparadoxa australica CS_1217) back to top