mRNA_C-australica_Contig_10219.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10219.1.1
Unique NamemRNA_C-australica_Contig_10219.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Match: A0A2E8MYS5_9RICK (OmpA-like domain-containing protein n=4 Tax=Bacteria TaxID=2 RepID=A0A2E8MYS5_9RICK)

HSP 1 Score: 419 bits (1078), Expect = 2.210e-140
Identity = 198/277 (71.48%), Postives = 237/277 (85.56%), Query Frame = 1
Query:    1 VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYEIFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQTEKLSSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDETGEWQPAVNVGPPLNTEGPNFISSITNIDGKEVLVLGNRYGKRGRMYNGVSMATRSADGTFTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSYGGRDLYVSFKRSGIWSDPKILGNDINT 831
            + ESENPGAV ++ AYD +YNEY LFELTPR+IPLESRLLNLFFD TPYEI+AI+V I+GE VPGYN+IDAIG+S+SN+PI VLI+L   V  N++ +KL +NVNS YIEHSP+ISPDGKRLYFSR+YHP+N+GGV+D EDIW+SE+D+ TGEW PA N+G PLNT GPNFISSIT +DGKE L+LGNRYGK+GRMY+GVSM++R  D TF EP S+EVTN+YNYSPK D+FL  SG  ++ISAERDDSYGGRDLYV F+   IWS+PK LGNDINT
Sbjct:   90 IGESENPGAVTKVFAYDSEYNEYLLFELTPRAIPLESRLLNLFFDMTPYEIYAIRVEIDGEAVPGYNAIDAIGVSASNLPITVLINLVPGVAQNVEADKLGANVNSQYIEHSPIISPDGKRLYFSRRYHPDNVGGVDDVEDIWVSELDEATGEWMPAKNLGAPLNTAGPNFISSITVVDGKETLILGNRYGKKGRMYSGVSMSSRDGD-TFEEPASVEVTNDYNYSPKVDYFLGNSGNTMIISAERDDSYGGRDLYVCFRDDKIWSEPKNLGNDINT 365          
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Match: A0A654EC73_9BACT (WD40 repeat protein n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654EC73_9BACT)

HSP 1 Score: 418 bits (1075), Expect = 6.260e-140
Identity = 195/277 (70.40%), Postives = 242/277 (87.36%), Query Frame = 1
Query:    1 VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYEIFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQTEKLSSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDETGEWQPAVNVGPPLNTEGPNFISSITNIDGKEVLVLGNRYGKRGRMYNGVSMATRSADGTFTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSYGGRDLYVSFKRSGIWSDPKILGNDINT 831
            +AESENPGAV  + AYD +YNEY+LFELTPR+IP++SRLLNLFFD+TPYEI+AIKV I+GE VPGYN+IDAIGIS+SN+PI+VLI+L   +  N + +KLS+NVNS YIEHSP+ISPDGK LYFSR+YHP+N+GGV+D EDIW+S++D +TGEW PA N+GPPLNTEGPNFISSIT +DG+EVLVLGNRYGK+GRMY GVS++ R  D  F +P ++EVTN+YNYSPK D+FL  SG+A++I+AERDDSYGGRDLYVSF + G WS+PK LG++INT
Sbjct:   90 IAESENPGAVTRVYAYDNEYNEYTLFELTPRAIPIDSRLLNLFFDDTPYEIYAIKVFIDGEAVPGYNAIDAIGISASNLPISVLINLVPGMAQNKEADKLSTNVNSPYIEHSPIISPDGKHLYFSRRYHPDNVGGVDDVEDIWVSDLDPKTGEWLPAKNIGPPLNTEGPNFISSITMVDGEEVLVLGNRYGKKGRMYTGVSVSRRKGD-KFDDPVAVEVTNDYNYSPKVDYFLSASGKAMVIAAERDDSYGGRDLYVSFDQGGTWSEPKNLGDEINT 365          
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Match: A0A239EUQ0_9BACT (WD40-like Beta Propeller Repeat n=1 Tax=Ekhidna lutea TaxID=447679 RepID=A0A239EUQ0_9BACT)

HSP 1 Score: 412 bits (1059), Expect = 1.430e-137
Identity = 192/278 (69.06%), Postives = 242/278 (87.05%), Query Frame = 1
Query:    1 VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYEIFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQTEKLSSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDETGEWQPAVNVGPPLNTEGPNFISSITNIDGKEVLVLGNRYGKRGRMYNGVSMATRSADGTFTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSYGGRDLYVSFKRS-GIWSDPKILGNDINT 831
            +AESENPGAVK +  YD +YNEY+LFELT R +P+ESRLLNLFF+ETPY I A++VV++  +  GYN+IDAIGIS+SNIPI VL++LA  VN+ +  EKLS+NVNS Y+EHSP+ISPDGK+LYFSR++HP+N+GGVND+EDIW+SE+D+ETGEW PA NVGPPLNT+GPNFISS++ +DGKEVL+LGNRYGK+GRMY GVSM+T+  D TF +PTS+E+ NEYNYSP  DFFL P GEA+++SAERDD+YGGRDLYVSFK++ G W++P  LG+DINT
Sbjct:   89 IAESENPGAVKAVYGYDSEYNEYTLFELTARDLPIESRLLNLFFEETPYAIEAVRVVLDCSVSEGYNAIDAIGISASNIPINVLLNLAPGVNSAVDAEKLSTNVNSDYVEHSPIISPDGKKLYFSRQFHPDNVGGVNDAEDIWVSELDEETGEWLPAKNVGPPLNTKGPNFISSMSMVDGKEVLILGNRYGKKGRMYTGVSMSTKEGD-TFADPTSIEIENEYNYSPNADFFLAPGGEAMIMSAERDDTYGGRDLYVSFKKNDGTWTEPMNLGDDINT 365          
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Match: A0A3D9L4J9_MARFU (WD40 repeat protein n=2 Tax=Marinoscillum furvescens TaxID=1026 RepID=A0A3D9L4J9_MARFU)

HSP 1 Score: 403 bits (1035), Expect = 4.170e-134
Identity = 192/278 (69.06%), Postives = 236/278 (84.89%), Query Frame = 1
Query:    1 VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYEIFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQTEKLSSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDETGEWQPAVNVGPPLNTEGPNFISSITNI-DGKEVLVLGNRYGKRGRMYNGVSMATRSADGTFTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSYGGRDLYVSFKRSGIWSDPKILGNDINT 831
            +AESENPGAV  + AYD++YNEY LFEL PR IPL+SRLLNLFFD+TPYEI+AI+V I+GE VPGYN+IDAIGIS+SN+PI VLI+L   V  N++ ++L + VNS+YIEHSP+ISPDGK LYFSR+YHP+N+GGV+D EDIW+S++D ETGEW PA N+GPPLNTEGPNFISSIT + DG+EVL+LGNRYGK+GRMY+GVSM+ R  D  F +P S+EV NEYNYS K D+FL P+GEA+++SAERDDSYGGRDLYV+FK    W+ PK LG D+NT
Sbjct:   77 IAESENPGAVTSVYAYDQEYNEYLLFELEPRPIPLDSRLLNLFFDDTPYEIYAIRVEIDGEAVPGYNAIDAIGISASNLPITVLINLVPGVAQNVEADRLGATVNSNYIEHSPIISPDGKHLYFSRRYHPDNVGGVDDVEDIWVSDLDPETGEWLPARNIGPPLNTEGPNFISSITVVGDGEEVLILGNRYGKKGRMYSGVSMSKRKGDH-FDKPVSIEVENEYNYSAKVDYFLAPTGEAMVMSAERDDSYGGRDLYVTFKDGNTWTAPKNLGIDVNT 353          
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Match: A0A5E8ARV9_9BACT (OmpA-like domain-containing protein n=2 Tax=Imperialibacter TaxID=1649461 RepID=A0A5E8ARV9_9BACT)

HSP 1 Score: 360 bits (924), Expect = 4.220e-117
Identity = 169/278 (60.79%), Postives = 227/278 (81.65%), Query Frame = 1
Query:    1 VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYEIFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQT-EKLSSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDETGEWQPAVNVGPPLNTEGPNFISSITNIDGKEVLVLGNRYGKRGRMYNGVSMATRSADGTFTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSYGGRDLYVSFKR-SGIWSDPKILGNDIN 828
            +AES+NPGA+ ++ AYD  +NE+ LFELTPRSIP+ESRLLNLFF+ T YEI  I++VI+G  + G NSIDAIGIS SNIPI VL+++A NVN NL+T EKL  NVNS+Y+EHSP+ISPDGK L+FSR+YHP+N+GGV+D+EDIW SE ++E  EW  A N GPPLNT+GPNF+SSIT  +G+ +L+LGN+YGK+G+M+ G SM+ +  +G + EP ++E+ N+YNY+ + D+ L   G+A++IS+ERDD+YGGRDLYVSFK+ +G WS+PK LG D+N
Sbjct:   94 IAESQNPGAISQVYAYDASFNEFLLFELTPRSIPIESRLLNLFFERTSYEIAGIRLVIDGRSIKGLNSIDAIGISDSNIPITVLVNIAQNVNQNLETVEKLGENVNSTYVEHSPIISPDGKYLFFSRQYHPQNVGGVDDAEDIWYSEWNEEKQEWNIAKNAGPPLNTKGPNFVSSITQENGEMILLLGNQYGKKGKMFAGASMS-KLVNGEWAEPENIEIENDYNYNSRVDYSLSADGKAMIISSERDDTYGGRDLYVSFKKGNGTWSEPKNLGGDLN 370          
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Match: A0A1W2GD58_9BACT (WD40-like Beta Propeller Repeat n=1 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2GD58_9BACT)

HSP 1 Score: 347 bits (891), Expect = 2.180e-112
Identity = 167/278 (60.07%), Postives = 218/278 (78.42%), Query Frame = 1
Query:    1 VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYEIFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQTEKLSSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDETGEWQPAVNVGPPLNTEGPNFISSITNIDGKEVLVLGNRYGKRGRMYNGVSMATRSADGTFTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSYGGRDLYVSFKR-SGIWSDPKILGNDINT 831
            +AE+ENPGA+ ++ AYD   NEY +F+L PR IPL+SRLLNLFF++TPY I  I+V I+G  VPG+NSIDAIG+SSSNIPI+VLIDLA NVN  L TE+L  NVNS Y+E SP++SPDGK LYFSR+ HP+N+GGV+D EDIW SE+D+ET EW PA N+GPPLNT GPNFI SIT +  + VL+LGNRY KRGRM  GVSM+    DG + +P++L + N+YNYS K D+++    + +L++ ERDD+YG RD+YVSF + +G +S+PK LGN +N+
Sbjct:   89 IAETENPGAISKVFAYDSLDNEYLIFDLNPRPIPLQSRLLNLFFEKTPYRIAYIRVDIKGGNVPGFNSIDAIGLSSSNIPISVLIDLAKNVNQQLVTERLGENVNSQYLEQSPILSPDGKTLYFSRRAHPDNVGGVDDYEDIWYSELDEETQEWLPAKNLGPPLNTPGPNFICSITQVGDETVLLLGNRYEKRGRMAQGVSMSRSKGDGKWDKPSNLNIENDYNYSEKVDYYMSTDTKVILMAIERDDTYGDRDIYVSFVQPNGDFSEPKNLGNVVNS 366          
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Match: A0A1M6P520_9BACT (WD40-like Beta Propeller Repeat n=3 Tax=Reichenbachiella TaxID=156993 RepID=A0A1M6P520_9BACT)

HSP 1 Score: 337 bits (863), Expect = 9.000e-108
Identity = 165/279 (59.14%), Postives = 212/279 (75.99%), Query Frame = 1
Query:    1 VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYEIFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQTEKLSSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDETGEWQPAVNVGPPLNTEGPNFISSITNIDGKEVLVLGNRYGKRGRMYNGVSMATRSADGTFTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSYGGRDLYVSFKRS--GIWSDPKILGNDINT 831
            +AE+ENPGAV ++ AYD   NEY LF+L  R IPL+SRLLNLFF++TPY I  ++V I GE VPGYNSIDAIG+SSSNIPI+VLI+LA+NVNNNL T +L +NVNS Y E  PL+SPDGK+LYFSR  HP+N+GG +D  DIW SE+D+ET EW PA N+G PLNT GPN+I SIT I  + +L+LGNRY KRGRM  G+SM+  + +G + +P ++++ N YNYS + DF++    E L++S ERDD+ GGRDLYVSFK      WS+P  LG+ IN+
Sbjct:   89 IAETENPGAVSKVYAYDSLDNEYLLFDLNTRPIPLKSRLLNLFFEKTPYRIAYLRVDINGESVPGYNSIDAIGLSSSNIPISVLIELASNVNNNLSTTQLGTNVNSEYSELGPLLSPDGKKLYFSRMSHPDNVGGTDDYSDIWYSELDEETQEWLPAKNIGSPLNTPGPNYICSITQIGDEIILLLGNRYEKRGRMGEGISMSKSNGNGKWDKPVNVDIENPYNYSEQADFYMSQDTEMLIMSLERDDTNGGRDLYVSFKTDVENTWSEPMNLGSVINS 367          
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Match: A0A2G5L5L9_9BACT (OmpA-like domain-containing protein n=1 Tax=Reichenbachiella sp. 5M10 TaxID=1889772 RepID=A0A2G5L5L9_9BACT)

HSP 1 Score: 334 bits (856), Expect = 6.880e-107
Identity = 165/280 (58.93%), Postives = 217/280 (77.50%), Query Frame = 1
Query:    1 VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYEIFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQTEKLSSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDETGEWQPAVNVGPPLNTEGPNFISSITNIDGKEVLVLGNRYGKRGRMYNGVSMATRSADGT-FTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSYGGRDLYVSFKR--SGIWSDPKILGNDINT 831
            +AE+ENPGAV ++ AYD   NEY LF+L  R IPL+SRLLNLFF++TPY I  I+V ++   VPGYNSIDAIG+SSSNIPI+VLI+LA NVNNNL TE+LS+NVNS Y+E  PL+SPDGKRLYFSR+ HP+N+GG++D  DIW SE+D+ET EW PA N+G PLNT GPN+I SIT +  + +L+LGNRY KRGRM  G+SM+ RS+DG  + +P ++++ N YNYS + DF++    E +++S ERDD+ G RDLY SFK+  S +WS+P  +G  IN+
Sbjct:   89 IAETENPGAVSKVFAYDSLDNEYLLFDLNARPIPLQSRLLNLFFEKTPYRIAYIRVDLDCTTVPGYNSIDAIGLSSSNIPISVLIELADNVNNNLSTERLSTNVNSEYVELGPLLSPDGKRLYFSRRSHPDNVGGMDDYSDIWYSELDEETHEWLPAKNIGAPLNTPGPNYICSITQVGDETILLLGNRYEKRGRMGEGISMS-RSSDGDKWDKPENIDIENSYNYSDQADFYMSADTEIIIMSLERDDTNGDRDLYASFKKPNSEMWSEPLNMGVTINS 367          
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Match: UPI000D6EA158 (OmpA family protein n=1 Tax=Reichenbachiella versicolor TaxID=1821036 RepID=UPI000D6EA158)

HSP 1 Score: 322 bits (825), Expect = 3.260e-102
Identity = 157/279 (56.27%), Postives = 209/279 (74.91%), Query Frame = 1
Query:    1 VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYEIFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQTEKLSSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDETGEWQPAVNVGPPLNTEGPNFISSITNIDGKEVLVLGNRYGKRGRMYNGVSMATRSADGTFTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSYGGRDLYVSF--KRSGIWSDPKILGNDINT 831
            +AE+ENPGAV ++ AYD   NE+ LFEL  R IPL+SRLLNLFF+ T Y+I  +++ +   +VPGYN IDAIGIS SNIPI+VLI LA NVN NL TEKLS++VNS+Y E SP++SPDGK L+FSR+ HP+NIGGV+D EDIW S++D +TGEW PA N+G PLNT GPN+I S T ++G+  L+LGN+YGKRG+M  G+S+     +G +  P  +++ N YNYS + DF++      +++S ERDDS G RDLYVSF  K++ IWS+P  LG+ IN+
Sbjct:  102 IAETENPGAVSKVFAYDSLDNEHLLFELNARPIPLDSRLLNLFFERTSYKIAYVRIDLACGVVPGYNGIDAIGISDSNIPISVLIKLAPNVNENLVTEKLSNSVNSTYNEQSPVLSPDGKTLFFSRRGHPDNIGGVDDVEDIWYSKLDPKTGEWLPAKNIGKPLNTWGPNYICSATEVNGELTLLLGNQYGKRGQMLEGISITKLKPNGKWEYPVPVKIDNAYNYSDQADFYMSQDASVIILSQERDDSNGDRDLYVSFENKKTNIWSEPLSLGSVINS 380          
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Match: A0A1G9DL54_9BACT (WD40-like Beta Propeller Repeat n=1 Tax=Catalinimonas alkaloidigena TaxID=1075417 RepID=A0A1G9DL54_9BACT)

HSP 1 Score: 290 bits (741), Expect = 4.530e-90
Identity = 146/278 (52.52%), Postives = 198/278 (71.22%), Query Frame = 1
Query:    1 VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYEIFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQTEKLSSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDETGEWQPAVNVGPPLNTEGPNFISSITNIDGKEVLVLGNRYGKRGRMYNGVSMATRSADGTFTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSYGGRDLYVSF-KRSGIWSDPKILGNDINT 831
            V E+ NPGAV ++  YD    EY +   TPR +   +R+ N+FF+ET YE+ A+K+ ++GE VPGYN+IDAIGIS+S +PI   I++  N+N +L  E+LS NVNS Y E  PL+SPDGK L+FSR++HPENIGGV+D EDIW SE+D   GEW  A NVG PLN  GPNFISS+T      ++VLGN Y K  +M  GVS++ ++ADG +T+P +L+V N YN++ + +F++  S + LL+S ER+DS G RDLYVSF K  G W++P  LG+DINT
Sbjct:   89 VGEAFNPGAVYQVFTYDAQGKEYLINTFTPRPVTRSARMFNVFFNETEYEVAAVKITLDGEAVPGYNAIDAIGISNSRVPIDAEINILENINRDLVPERLSENVNSQYKELKPLLSPDGKTLFFSRQHHPENIGGVDDPEDIWYSELD-ANGEWGKAKNVGAPLNNGGPNFISSVTPDGNTMIVVLGNEYAKGDKMRAGVSISRKTADG-WTKPENLKVENLYNFNDRANFYMSNSRKVLLMSIEREDSRGSRDLYVSFTKDDGSWTEPLNLGDDINT 364          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10219.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8MYS5_9RICK2.210e-14071.48OmpA-like domain-containing protein n=4 Tax=Bacter... [more]
A0A654EC73_9BACT6.260e-14070.40WD40 repeat protein n=1 Tax=Marinoscillum sp. 108 ... [more]
A0A239EUQ0_9BACT1.430e-13769.06WD40-like Beta Propeller Repeat n=1 Tax=Ekhidna lu... [more]
A0A3D9L4J9_MARFU4.170e-13469.06WD40 repeat protein n=2 Tax=Marinoscillum furvesce... [more]
A0A5E8ARV9_9BACT4.220e-11760.79OmpA-like domain-containing protein n=2 Tax=Imperi... [more]
A0A1W2GD58_9BACT2.180e-11260.07WD40-like Beta Propeller Repeat n=1 Tax=Reichenbac... [more]
A0A1M6P520_9BACT9.000e-10859.14WD40-like Beta Propeller Repeat n=3 Tax=Reichenbac... [more]
A0A2G5L5L9_9BACT6.880e-10758.93OmpA-like domain-containing protein n=1 Tax=Reiche... [more]
UPI000D6EA1583.260e-10256.27OmpA family protein n=1 Tax=Reichenbachiella versi... [more]
A0A1G9DL54_9BACT4.530e-9052.52WD40-like Beta Propeller Repeat n=1 Tax=Catalinimo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10219contigC-australica_Contig_10219:2..832 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1124780.ANNU01000005_gene2554
PFAMsOmpA,PD40
Model size831
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.54e-90
EggNOG OGsCOG2885@1|root,COG2885@2|Bacteria,4NEND@976|Bacteroidetes,47KG7@768503|Cytophagia
DescriptionBelongs to the ompA family
Cds size831
COG categoryM
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586759.5255487-CDS-C-australica_Contig_10219:1..8321682586759.5255487-CDS-C-australica_Contig_10219:1..832Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10219 2..832 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10219.1.1prot_C-australica_Contig_10219.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10219 2..832 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10219.1.1

>prot_C-australica_Contig_10219.1.1 ID=prot_C-australica_Contig_10219.1.1|Name=mRNA_C-australica_Contig_10219.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=277bp
VAESENPGAVKEILAYDKDYNEYSLFELTPRSIPLESRLLNLFFDETPYE
IFAIKVVIEGEIVPGYNSIDAIGISSSNIPIAVLIDLAANVNNNLQTEKL
SSNVNSSYIEHSPLISPDGKRLYFSRKYHPENIGGVNDSEDIWMSEMDDE
TGEWQPAVNVGPPLNTEGPNFISSITNIDGKEVLVLGNRYGKRGRMYNGV
SMATRSADGTFTEPTSLEVTNEYNYSPKTDFFLDPSGEALLISAERDDSY
GGRDLYVSFKRSGIWSDPKILGNDINT
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mRNA from alignment at C-australica_Contig_10219:2..832+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10219.1.1 ID=mRNA_C-australica_Contig_10219.1.1|Name=mRNA_C-australica_Contig_10219.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=831bp|location=Sequence derived from alignment at C-australica_Contig_10219:2..832+ (Chrysoparadoxa australica CS_1217)
GTTGCTGAATCAGAAAACCCAGGGGCGGTCAAGGAAATTCTGGCTTATGA CAAGGATTATAATGAATATTCCCTTTTTGAATTAACGCCACGGTCAATCC CATTGGAAAGTCGACTCTTGAATTTGTTTTTTGATGAGACACCTTATGAA ATATTTGCAATTAAGGTAGTCATTGAGGGAGAGATTGTTCCAGGCTATAA TAGTATAGATGCAATTGGTATTTCAAGTAGTAACATTCCAATTGCAGTAT TGATCGATCTTGCAGCTAATGTGAATAACAACCTTCAAACTGAGAAATTG AGCAGTAATGTAAACAGCTCATATATTGAACATAGTCCGTTGATTTCTCC TGATGGTAAGAGATTATATTTCAGTAGAAAATATCATCCCGAAAATATTG GAGGTGTGAATGATAGTGAAGATATATGGATGTCAGAGATGGATGATGAA ACCGGGGAATGGCAACCTGCGGTGAATGTCGGACCCCCATTAAATACGGA AGGTCCTAACTTTATCAGTTCAATTACCAATATTGATGGTAAAGAGGTGT TGGTTTTAGGTAACAGGTACGGAAAGCGTGGTAGGATGTACAATGGTGTT TCTATGGCAACCAGATCTGCAGATGGCACATTTACTGAACCTACTTCTTT GGAGGTCACCAACGAATATAATTATTCACCTAAAACAGATTTCTTTCTTG ACCCCTCAGGAGAGGCTTTGTTAATATCAGCTGAGCGGGATGATAGCTAT GGCGGAAGAGATTTGTATGTTTCTTTTAAAAGAAGTGGTATTTGGAGCGA CCCAAAAATCCTGGGGAATGATATAAATACT
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Coding sequence (CDS) from alignment at C-australica_Contig_10219:2..832+

>mRNA_C-australica_Contig_10219.1.1 ID=mRNA_C-australica_Contig_10219.1.1|Name=mRNA_C-australica_Contig_10219.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=831bp|location=Sequence derived from alignment at C-australica_Contig_10219:2..832+ (Chrysoparadoxa australica CS_1217)
GTTGCTGAATCAGAAAACCCAGGGGCGGTCAAGGAAATTCTGGCTTATGA
CAAGGATTATAATGAATATTCCCTTTTTGAATTAACGCCACGGTCAATCC
CATTGGAAAGTCGACTCTTGAATTTGTTTTTTGATGAGACACCTTATGAA
ATATTTGCAATTAAGGTAGTCATTGAGGGAGAGATTGTTCCAGGCTATAA
TAGTATAGATGCAATTGGTATTTCAAGTAGTAACATTCCAATTGCAGTAT
TGATCGATCTTGCAGCTAATGTGAATAACAACCTTCAAACTGAGAAATTG
AGCAGTAATGTAAACAGCTCATATATTGAACATAGTCCGTTGATTTCTCC
TGATGGTAAGAGATTATATTTCAGTAGAAAATATCATCCCGAAAATATTG
GAGGTGTGAATGATAGTGAAGATATATGGATGTCAGAGATGGATGATGAA
ACCGGGGAATGGCAACCTGCGGTGAATGTCGGACCCCCATTAAATACGGA
AGGTCCTAACTTTATCAGTTCAATTACCAATATTGATGGTAAAGAGGTGT
TGGTTTTAGGTAACAGGTACGGAAAGCGTGGTAGGATGTACAATGGTGTT
TCTATGGCAACCAGATCTGCAGATGGCACATTTACTGAACCTACTTCTTT
GGAGGTCACCAACGAATATAATTATTCACCTAAAACAGATTTCTTTCTTG
ACCCCTCAGGAGAGGCTTTGTTAATATCAGCTGAGCGGGATGATAGCTAT
GGCGGAAGAGATTTGTATGTTTCTTTTAAAAGAAGTGGTATTTGGAGCGA
CCCAAAAATCCTGGGGAATGATATAAATACT
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