Homology
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Match:
A0A222E3R1_9RHOB (Probable multidrug resistance protein NorM n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E3R1_9RHOB)
HSP 1 Score: 530 bits (1365), Expect = 4.280e-187
Identity = 269/277 (97.11%), Postives = 274/277 (98.92%), Query Frame = 1
Query: 1 IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRRTGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWGLAGLLLEELVKFPAFHLRLIRGDW 831
IGVP+NVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSL+RRTGAYRDV GWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALD+FLAGAWRAAGVAAGLVALFYMTICALSPWIYPDL+A+TLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFW LA LLLEELVKFPAFHLRLIRGDW
Sbjct: 171 IGVPINVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLMRRTGAYRDVIGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDTFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLHADTLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWVLAVLLLEELVKFPAFHLRLIRGDW 447
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Match:
A0A0M6XVK4_9RHOB (Probable multidrug resistance protein NorM n=1 Tax=Jannaschia rubra TaxID=282197 RepID=A0A0M6XVK4_9RHOB)
HSP 1 Score: 397 bits (1020), Expect = 1.010e-134
Identity = 201/277 (72.56%), Postives = 229/277 (82.67%), Query Frame = 1
Query: 1 IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRRTGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWGLAGLLLEELVKFPAFHLRLIRGDW 831
+GVPVN+ VS+ FI+G LGAP MGVVGAA+GSAT ALLQA FL L RRT +R V GWRNGTF AS++RHL FA PIAATF+SATVASNVCMLLYA+L VN FAAMTLIMPW+ VAGT GMSWAQATGI VAQ+LG + G+ L+ FL GAWRAA VAAG+VA Y+TI ALSPWIY +L+ T +T + FWP+LLLLPFPKGSNAICGNTLRAAGET+YVMHVFVWSQWLFRVP TA+L+LY VP W + LL+EEL+KFPAFH RL RGDW
Sbjct: 171 LGVPVNIGVSISFIHGLLGAPEMGVVGAAVGSATAALLQAAFLGLCLWRRTAFHRGVPGWRNGTFRASLRRHLAFAWPIAATFVSATVASNVCMLLYAKLDVNAFAAMTLIMPWVQVAGTVGMSWAQATGIIVAQLLGSDRRGETLERFLGGAWRAAFVAAGVVAAIYLTIIALSPWIYSELHPTTRATLLSFWPVLLLLPFPKGSNAICGNTLRAAGETVYVMHVFVWSQWLFRVPVTALLVLYPGVPVVWVFSLLLIEELIKFPAFHSRLFRGDW 447
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Match:
A0A0W7WNY4_9RHOB (Probable multidrug resistance protein NorM n=1 Tax=Ponticoccus marisrubri TaxID=1685382 RepID=A0A0W7WNY4_9RHOB)
HSP 1 Score: 369 bits (946), Expect = 1.750e-123
Identity = 188/277 (67.87%), Postives = 221/277 (79.78%), Query Frame = 1
Query: 1 IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRRTGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWGLAGLLLEELVKFPAFHLRLIRGDW 831
+ VPVNVV S++ I+G GAP +GVVGAA GS ++LQ GFL LL R V+GWRNG+FAAS++RHL FA PIAATF SATVA +VC L+YA L VN+FAAMT+IMPW+ VAGTFGMSWAQ+TGI VAQ+LGR SG LD FLAGAWRAA VAAG+VA FY IC +PWIY +L+AET T + F PIL+LLPFPKGSNAICGNTLRA GET+YVMH+FVWSQWLFRVPATA+++LY ++P FW + LL EELVKFP FHLRL+RG W
Sbjct: 173 VAVPVNVVASVVLIHGHFGAPQLGVVGAAWGSVLASVLQVGFLAVVLLWRRRDLLRVAGWRNGSFAASLRRHLVFALPIAATFGSATVALHVCGLIYADLPVNQFAAMTIIMPWVQVAGTFGMSWAQSTGIIVAQLLGRGTSGPDLDRFLAGAWRAAIVAAGVVAAFYAGICLSTPWIYAELHAETQRTLLSFLPILVLLPFPKGSNAICGNTLRAGGETVYVMHIFVWSQWLFRVPATALMVLYLELPVFWVFSLLLAEELVKFPPFHLRLLRGRW 449
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Match:
A0A5D0RUN0_9RHOB (Probable multidrug resistance protein NorM n=1 Tax=Oceaniovalibus sp. ACAM 378 TaxID=2599923 RepID=A0A5D0RUN0_9RHOB)
HSP 1 Score: 360 bits (925), Expect = 2.480e-120
Identity = 181/277 (65.34%), Postives = 218/277 (78.70%), Query Frame = 1
Query: 1 IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRRTGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWGLAGLLLEELVKFPAFHLRLIRGDW 831
+ VP+N+V S+I I+G GAP +GVVGAA+GSA + LQ GFLT LL R A V GWRNGTFAA+++RHL FA PIAATF SAT+A +VC ++YA+L +N+FAAMTLIMPWI VAGT GMSWAQATGI VAQ+LGR + LDSFLA AW+ A A LVA+ + IC SPWIY DLN ET +T + F PILLLLPFPKGSNAICGN+LRA GET+YVMH+FVWSQWLFRVPATA+++L+F +P W + LL EELVKFP FHLR+++GDW
Sbjct: 171 VAVPINIVSSIILIHGLFGAPELGVVGAALGSALASFLQVGFLTAVLLSRRAALLRVPGWRNGTFAATLRRHLVFALPIAATFSSATIAMSVCGMIYAKLPINQFAAMTLIMPWINVAGTAGMSWAQATGILVAQLLGRRIPEQDLDSFLADAWKVALFLAALVAVVFAGICLGSPWIYADLNRETQATLLSFLPILLLLPFPKGSNAICGNSLRAGGETVYVMHIFVWSQWLFRVPATALMVLWFQMPVLWIFSLLLAEELVKFPPFHLRMLKGDW 447
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Match:
A0A238K881_9RHOB (Probable multidrug resistance protein NorM n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238K881_9RHOB)
HSP 1 Score: 356 bits (913), Expect = 1.630e-118
Identity = 179/277 (64.62%), Postives = 217/277 (78.34%), Query Frame = 1
Query: 1 IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRRTGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWGLAGLLLEELVKFPAFHLRLIRGDW 831
+ VPVN+ S++ I+G G P GVVGAA+GSA +LLQ GFL LL R G + GWRNG+FAA+++RHLGFA PIAATF SAT+A +VC L+YARL V EFAAMT+IMPW+ VAGT GMSWAQATGI VAQ+LGR + LD+FLA AWR A +AA LVA+FY +C +PWIY DL+A+T +T +GF PILL+LPFPKGSNAICGNTLRA GET+YVMH+FVWSQWLFRVPATA+++L+ D+P W + LL EELVKF FHLRL +G W
Sbjct: 171 LAVPVNIASSIVLIHGLFGLPEFGVVGAAMGSALASLLQVGFLVLRLLSRRGDLLRLPGWRNGSFAATLRRHLGFALPIAATFGSATIAMSVCGLIYARLPVIEFAAMTIIMPWVQVAGTIGMSWAQATGIIVAQLLGRATPEEQLDAFLAEAWRVALIAAALVAVFYAGVCLSTPWIYADLHADTRATLLGFLPILLVLPFPKGSNAICGNTLRAGGETVYVMHIFVWSQWLFRVPATALMVLWLDLPVTWVFSLLLAEELVKFAPFHLRLRKGRW 447
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Match:
A0A1W2EK79_9RHOB (Probable multidrug resistance protein NorM n=2 Tax=Primorskyibacter flagellatus TaxID=1387277 RepID=A0A1W2EK79_9RHOB)
HSP 1 Score: 355 bits (910), Expect = 4.770e-118
Identity = 182/277 (65.70%), Postives = 213/277 (76.90%), Query Frame = 1
Query: 1 IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRRTGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWGLAGLLLEELVKFPAFHLRLIRGDW 831
+ VP+NV S+I I+G GAP GVVGAA+GSA + LQAGFL L+ RTG V+GWRNGTF AS++RHL FA PIA TF SAT+A NVC L+YA VN+FAAMT+IMPW+ VAGTFGMSWAQATGI VAQ+LGR SGD LD FLAGAWR A VAA +VA Y I SP IY DL+ ET + + F PILL+LPFPKGSNAICGNTLRA GET+YVMH+FVWSQWLFRVPATAV++LY D+ W + LL+EE+VKF FHLR+ +GDW
Sbjct: 172 LAVPINVSTSVILIHGLYGAPEFGVVGAAMGSALASALQAGFLATVLMIRTGFLLRVTGWRNGTFLASLRRHLVFALPIATTFASATIAMNVCGLIYAAFPVNQFAAMTIIMPWVQVAGTFGMSWAQATGIIVAQLLGRGQSGDGLDGFLAGAWRGALVAATVVAAIYAVIVIASPIIYSDLHTETRAMLMTFLPILLVLPFPKGSNAICGNTLRAGGETVYVMHIFVWSQWLFRVPATAVMVLYLDLSVTWVFSLLLIEEIVKFAPFHLRMYKGDW 448
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Match:
UPI0008D0E75E (MATE family efflux transporter n=1 Tax=Marinovum algicola TaxID=42444 RepID=UPI0008D0E75E)
HSP 1 Score: 349 bits (895), Expect = 8.600e-116
Identity = 174/277 (62.82%), Postives = 213/277 (76.90%), Query Frame = 1
Query: 1 IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRRTGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWGLAGLLLEELVKFPAFHLRLIRGDW 831
+ VPVN+ S+I I+G GAPA+GV+GAA+GSA +++Q GFL LLR GWRNG+F+AS++RHL FA PIAATF SAT+A +VC L+YA L VN+FAAMT+IMPW+ VAGT GM WAQATGI V QMLGR + L+ FLA AWR A +AA LVA FY + SPW+Y DL+ ET T +GF PILL+LPFPKGSNAICGNTLRA G+T+YVMH+F+WSQWLFRVPATAV++L+ D+P W + LLLEELVKFP FHLRL++G W
Sbjct: 171 LAVPVNIATSVILIHGHFGAPALGVLGAALGSALASMVQVGFLAVVLLRTRRDLLRTPGWRNGSFSASLRRHLVFALPIAATFASATIALHVCGLIYATLPVNQFAAMTIIMPWVQVAGTVGMCWAQATGIMVGQMLGRQTPPEDLEVFLAAAWRVALLAAALVATFYAGVILASPWLYADLSRETQMTLLGFLPILLVLPFPKGSNAICGNTLRAGGDTVYVMHIFIWSQWLFRVPATAVMVLWLDLPVIWIFSLLLLEELVKFPPFHLRLLKGTW 447
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Match:
A0A1N6FXV3_9RHOB (Probable multidrug resistance protein NorM n=2 Tax=Vannielia litorea TaxID=1217970 RepID=A0A1N6FXV3_9RHOB)
HSP 1 Score: 346 bits (888), Expect = 4.070e-115
Identity = 174/277 (62.82%), Postives = 212/277 (76.53%), Query Frame = 1
Query: 1 IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRRTGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWGLAGLLLEELVKFPAFHLRLIRGDW 831
+ VPVNV VS++ I+G GAPA+GV GAA+GSA ++LQ GFL LL R A V GWRNG+FAA+++RH F+ PIAATF SAT+A +VC LLYARL VN+FAAMT+IMPW+ V GTFGM WAQA GIYV QMLGR+ G+ LD+FL+ WR++ +A+GLVAL Y IC SPWIYP+L+ +T +T + F PIL+LLPFPKGSNAICGNTLRA GET+YVMHVFVWSQWLFRVPATA +L+ D A +L EEL+KF FH R+ RG W
Sbjct: 143 VAVPVNVTVSVVLIHGLFGAPALGVTGAAVGSAVASVLQVGFLAGLLLARDRALLRVGGWRNGSFAATLRRHFTFSLPIAATFGSATIAMSVCGLLYARLPVNDFAAMTIIMPWVQVVGTFGMCWAQAAGIYVGQMLGRSTPGEVLDAFLSVVWRSSFLASGLVALIYAGICLASPWIYPELHPDTRATLLSFLPILILLPFPKGSNAICGNTLRAGGETLYVMHVFVWSQWLFRVPATAAAVLWLDASVTVVFALVLAEELIKFTPFHARMRRGHW 419
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Match:
A0A2C9CVG9_9RHOB (Probable multidrug resistance protein NorM n=1 Tax=Monaibacterium marinum TaxID=1690039 RepID=A0A2C9CVG9_9RHOB)
HSP 1 Score: 342 bits (878), Expect = 3.620e-113
Identity = 168/277 (60.65%), Postives = 210/277 (75.81%), Query Frame = 1
Query: 1 IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRRTGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWGLAGLLLEELVKFPAFHLRLIRGDW 831
+ +P+NV+ S++ I+G+ G PA GV GAA+GSA +Q GFL L G R V+GWR +F A+++RHL FA PIA TF SAT AS+VC L+YARL +NEFAAMT+I PWIMVAGT GM WAQATGI VAQ+LG+ + LD FL AWR A VAAG+VA+ ++ +C + ++Y DL+ ET + + F PILL+LPFPKGSNAICGNTLRA+G+TIYVMH+FVWSQWLFRVPATA+ +LYFDV FW L+ L EEL+KFP FH RL+RGDW
Sbjct: 175 LSLPINVITSIVLIHGYFGLPAFGVTGAAMGSAIAVTVQVGFLVVRLWALDGYLRHVAGWRQLSFVATLRRHLAFALPIAVTFFSATFASHVCTLIYARLNLNEFAAMTIIAPWIMVAGTIGMQWAQATGIIVAQLLGQGQREEILDRFLRSAWRGAFVAAGVVAVIFLIVCLSASYLYADLDVETRTVLLSFLPILLVLPFPKGSNAICGNTLRASGDTIYVMHIFVWSQWLFRVPATALAVLYFDVSVFWVLSLLFFEELLKFPVFHRRLLRGDW 451
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Match:
UPI0018675238 (MATE family efflux transporter n=1 Tax=Fluviibacterium sp. MJW13 TaxID=2720031 RepID=UPI0018675238)
HSP 1 Score: 341 bits (875), Expect = 1.030e-112
Identity = 171/277 (61.73%), Postives = 207/277 (74.73%), Query Frame = 1
Query: 1 IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRRTGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARLGVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFLAGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLLPFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPAFWGLAGLLLEELVKFPAFHLRLIRGDW 831
+ +P+NV S++ I+G G PA GV GAA+GSA +Q GFL + L+R G R V GWRNGT A++KRHL F+ PIAATF SAT A+ C L+YAR+ +NEFAAMT+I PWIMVAGT GM WAQA+GI VAQ+LG+ LD FL AWR A VAA VAL Y +C + IY DL+ ET + + F PIL++LPFPK SNAICGNTLRA+G+TIYVMHVF+WSQWLFRVPATA+ +LYF VP FW L+ LLLEELVKFPAFH RL++GDW
Sbjct: 175 LSLPINVAASIVLIHGLFGLPAFGVTGAAMGSAIAVCVQVGFLVWRLVRLDGPLRHVVGWRNGTLNATIKRHLAFSLPIAATFFSATFAAQFCTLIYARMSLNEFAAMTIIAPWIMVAGTIGMQWAQASGIIVAQLLGQRQPEAVLDRFLGSAWRGAFVAAACVALVYSGVCLSAGVIYADLSVETRAYLLSFLPILVILPFPKCSNAICGNTLRASGDTIYVMHVFIWSQWLFRVPATAIAVLYFQVPVFWVLSILLLEELVKFPAFHRRLLKGDW 451
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10207.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 4.28e-187 / Id = 97.11 Expect = 1.01e-134 / Id = 72.56 Expect = 1.75e-123 / Id = 67.87 Expect = 2.48e-120 / Id = 65.34 Expect = 1.63e-118 / Id = 64.62 Expect = 4.77e-118 / Id = 65.70 Expect = 8.60e-116 / Id = 62.82 Expect = 4.07e-115 / Id = 62.82 Expect = 3.62e-113 / Id = 60.65 Expect = 1.03e-112 / Id = 61.73 Sequence A0A222E3R1_9RHOB A0A0M6XVK4_9RHOB A0A0W7WNY4_9RHOB A0A5D0RUN0_9RHOB A0A238K881_9RHOB A0A1W2EK79_9RHOB UPI0008D0E75E A0A1N6FXV3_9RHOB A0A2C9CVG9_9RHOB UPI0018675238
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Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10207.1.1
>prot_C-australica_Contig_10207.1.1 ID=prot_C-australica_Contig_10207.1.1|Name=mRNA_C-australica_Contig_10207.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=277bp
IGVPVNVVVSLIFINGWLGAPAMGVVGAAIGSATGALLQAGFLTYSLLRR TGAYRDVSGWRNGTFAASVKRHLGFAAPIAATFISATVASNVCMLLYARL GVNEFAAMTLIMPWIMVAGTFGMSWAQATGIYVAQMLGRNVSGDALDSFL AGAWRAAGVAAGLVALFYMTICALSPWIYPDLNAETLSTFVGFWPILLLL PFPKGSNAICGNTLRAAGETIYVMHVFVWSQWLFRVPATAVLILYFDVPA FWGLAGLLLEELVKFPAFHLRLIRGDW back to top mRNA from alignment at C-australica_Contig_10207:3..833+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10207.1.1 ID=mRNA_C-australica_Contig_10207.1.1|Name=mRNA_C-australica_Contig_10207.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=831bp|location=Sequence derived from alignment at C-australica_Contig_10207:3..833+ (Chrysoparadoxa australica CS_1217)ATCGGTGTGCCAGTCAACGTCGTGGTCAGCTTGATCTTTATCAACGGCTG
GCTAGGTGCCCCGGCAATGGGCGTGGTCGGCGCGGCAATCGGCAGCGCCA
CCGGCGCGCTGTTGCAGGCGGGGTTCCTGACCTACAGCCTGTTGCGCCGC
ACCGGCGCCTACCGCGATGTGAGCGGTTGGCGCAACGGTACGTTTGCTGC
CTCTGTCAAACGCCACCTCGGCTTTGCCGCACCAATCGCTGCGACCTTTA
TCAGCGCAACGGTGGCCAGCAACGTCTGTATGTTGCTTTATGCTCGTCTG
GGCGTAAACGAATTTGCCGCCATGACACTGATCATGCCCTGGATCATGGT
CGCCGGGACATTCGGCATGTCCTGGGCGCAGGCGACCGGCATCTACGTCG
CGCAAATGCTGGGGCGCAACGTCTCCGGCGACGCGTTGGACAGTTTTCTG
GCCGGGGCGTGGCGGGCAGCAGGTGTGGCGGCAGGGCTGGTTGCGCTGTT
CTACATGACAATATGTGCGCTCTCGCCGTGGATCTATCCGGATCTGAATG
CGGAGACGCTGTCCACCTTTGTCGGCTTTTGGCCAATCCTGTTGTTGTTG
CCGTTTCCGAAAGGATCAAACGCGATCTGTGGCAACACGTTGCGCGCCGC
CGGTGAGACGATCTATGTCATGCACGTCTTTGTCTGGTCACAGTGGCTGT
TCCGCGTCCCCGCAACAGCCGTCCTGATCCTGTATTTCGACGTGCCTGCC
TTCTGGGGGCTGGCGGGTTTGCTGCTGGAGGAACTGGTAAAATTCCCGGC
CTTTCACCTGCGGTTGATCCGGGGCGATTGG back to top Coding sequence (CDS) from alignment at C-australica_Contig_10207:3..833+
>mRNA_C-australica_Contig_10207.1.1 ID=mRNA_C-australica_Contig_10207.1.1|Name=mRNA_C-australica_Contig_10207.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=831bp|location=Sequence derived from alignment at C-australica_Contig_10207:3..833+ (Chrysoparadoxa australica CS_1217) ATCGGTGTGCCAGTCAACGTCGTGGTCAGCTTGATCTTTATCAACGGCTG GCTAGGTGCCCCGGCAATGGGCGTGGTCGGCGCGGCAATCGGCAGCGCCA CCGGCGCGCTGTTGCAGGCGGGGTTCCTGACCTACAGCCTGTTGCGCCGC ACCGGCGCCTACCGCGATGTGAGCGGTTGGCGCAACGGTACGTTTGCTGC CTCTGTCAAACGCCACCTCGGCTTTGCCGCACCAATCGCTGCGACCTTTA TCAGCGCAACGGTGGCCAGCAACGTCTGTATGTTGCTTTATGCTCGTCTG GGCGTAAACGAATTTGCCGCCATGACACTGATCATGCCCTGGATCATGGT CGCCGGGACATTCGGCATGTCCTGGGCGCAGGCGACCGGCATCTACGTCG CGCAAATGCTGGGGCGCAACGTCTCCGGCGACGCGTTGGACAGTTTTCTG GCCGGGGCGTGGCGGGCAGCAGGTGTGGCGGCAGGGCTGGTTGCGCTGTT CTACATGACAATATGTGCGCTCTCGCCGTGGATCTATCCGGATCTGAATG CGGAGACGCTGTCCACCTTTGTCGGCTTTTGGCCAATCCTGTTGTTGTTG CCGTTTCCGAAAGGATCAAACGCGATCTGTGGCAACACGTTGCGCGCCGC CGGTGAGACGATCTATGTCATGCACGTCTTTGTCTGGTCACAGTGGCTGT TCCGCGTCCCCGCAACAGCCGTCCTGATCCTGTATTTCGACGTGCCTGCC TTCTGGGGGCTGGCGGGTTTGCTGCTGGAGGAACTGGTAAAATTCCCGGC CTTTCACCTGCGGTTGATCCGGGGCGATTGG back to top