mRNA_C-australica_Contig_1020.3.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1020.3.1
Unique NamemRNA_C-australica_Contig_1020.3.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Match: A0A8G0XYR8_9BACT (Class I SAM-dependent RNA methyltransferase n=1 Tax=Ruficoccus sp. ZRK36 TaxID=2866311 RepID=A0A8G0XYR8_9BACT)

HSP 1 Score: 352 bits (902), Expect = 1.290e-114
Identity = 200/440 (45.45%), Postives = 263/440 (59.77%), Query Frame = 1
Query:    7 VSLTIDSLTNLGDGLGRATDGCVLMVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGGCDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRSKLTPHYEK------GTGKPAHEVKVGFLHHDSNGIILDVDRCVIATDAINEQMPVMRQEAKLNSVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQGNLLLREVAEGVVSEAK-TVQQEVAGITYQYDAAGFFQTNPSMLPCLVDFAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRHATASASLNGLKGKCTFQAGSAANVFGNVTLTPGQTACIIDPPRAGCDKQFLKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGGYKVLDVTPFDLFPQTRHIEAVMTLER 1305
            + L +D+LTNLG GLGR  DG V+MVPF +PGELVRAR+    K + EA+L+EV+EPSPERVQP+CQ FG+CGGC YQHM+  +QR+WK+QQV + L ++ G       V+   G+   Y YRSKLTPHY K      G   P  E+ +GFLH      I+DV  C IAT+AINE MP  R+  +  S                                            G LLLR   EGV ++ K +V +++    +Q+ A  FFQ NP +LP L+DF +++A   G  R+LVDAY G G+F+L  A    F+   G+E+NA AV+ A A+A++NG+     F  G A ++F  +     +TA IIDPPRAGCD+ F++QLL  GP+RVVYVSCDP+TQARD   L+ GGY + +V PFDLFPQTRHIE V  L R
Sbjct:   21 LELRVDTLTNLGSGLGRV-DGWVVMVPFALPGELVRARVYRNHKQHSEADLIEVVEPSPERVQPRCQLFGRCGGCQYQHMSYPAQREWKRQQVGELLVKLAGITH---PVNPTHGSPREYHYRSKLTPHYPKPFKPKPGGEGPPRELPIGFLHQGQRNRIVDVPACPIATEAINEAMPTERKRIRERSAKLRKG--------------------------------------GTLLLRHTLEGVTTDNKESVSEKIGSTVFQFLAGDFFQNNPFILPELIDFVMERARIDG-VRYLVDAYCGVGVFALCGARH--FERVAGVEVNASAVKWANANAAINGISN-AEFLIGEAESIFSTINFPGDETAMIIDPPRAGCDEAFIRQLLELGPRRVVYVSCDPATQARDLKMLLAGGYGLEEVQPFDLFPQTRHIENVAVLTR 414          
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Match: A0A835YJC5_9STRA (RNA methyltransferase, TrmA family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC5_9STRA)

HSP 1 Score: 341 bits (875), Expect = 2.840e-110
Identity = 199/446 (44.62%), Postives = 265/446 (59.42%), Query Frame = 1
Query:    7 VSLTIDSLTNLGDGLGRAT----DGCVLMVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGGCDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRSKLTPHYEKGTGKPAHEVK-VGFLHHDSNGIILDVDRCVIATDAINE--QMPVMRQEAKLNSVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQG-NLLLREVAEGVVSEAKT-VQQEVAGITYQYDAAGFFQTNPSMLPCLVDFAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRHATASASLNGLKGKCTFQAGSAANVFGNVT--LTPGQTACIIDPPRAGCDKQFLKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGGYKVLDVTPFDLFPQTRHIEAVMTLERAS 1311
            + L I+SLTNLGDG+ R T     G V+MV   +PGELV+A++     NY EA L EVLEPSP+RV P+C  FG CGGC YQHM + +QR+WK+QQV   L RIGG   +G+ V+  +G+E  YGYRSK+TPHYE    K   +V+ +GF       +  D+D   + T  I +  Q P+    A++                                            S+G  LLLR V EGVV + K  V +EV+G+T+++ A  FFQ NP +LP +V+  + +A G G  +FL+DAY G GLF+L A+    FD+C G+E++  AV  AT +A LNG++  CTF  G+A+ +F +         TA I+DPPR GCD+ FL QL  F P+RVVYVSCDP+TQARDA  +V  GY++ DVTPFDLFPQTRHIE V+T ER S
Sbjct:   22 LELRIESLTNLGDGVARVTVDGVAGWVVMVGRVVPGELVKAKVYRNHNNYSEATLTEVLEPSPDRVTPQCALFGMCGGCQYQHMAVGAQREWKRQQVVDVLERIGG--LRGVAVNAAVGSEHAYGYRSKITPHYEAPLRKAPGDVRSIGFQRLPFPTLFHDIDIETVDTQKILDVPQCPIAAARARVRDAAAAAFAAGRARFK----------------------------SKGATLLLRHVKEGVVYDNKELVTEEVSGLTFKFTAGEFFQNNPYVLPSMVEHVLARARGDGDVKFLIDAYCGGGLFALCASRH--FDACAGVEVSPAAVECATRNAQLNGIEN-CTFLQGTASAIFDSAQQLFDALSTAVIVDPPRKGCDEVFLAQLFAFAPRRVVYVSCDPATQARDAKDIVAAGYEITDVTPFDLFPQTRHIENVITFERRS 434          
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Match: A0A842HHT9_9BACT (Class I SAM-dependent RNA methyltransferase n=1 Tax=Ruficoccus amylovorans TaxID=1804625 RepID=A0A842HHT9_9BACT)

HSP 1 Score: 338 bits (868), Expect = 1.460e-109
Identity = 194/441 (43.99%), Postives = 258/441 (58.50%), Query Frame = 1
Query:    1 EVVSLTIDSLTNLGDGLGRATDGCVLMVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGGCDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRSKLTPHYEKG-------TGKPAHEVKVGFLHHDSNGIILDVDRCVIATDAINEQMPVMRQEAKLNSVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQGNLLLREVAEGVVSEAK-TVQQEVAGITYQYDAAGFFQTNPSMLPCLVDFAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRHATASASLNGLKGKCTFQAGSAANVFGNVTLTPGQTACIIDPPRAGCDKQFLKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGGYKVLDVTPFDLFPQTRHIEAVMTL 1299
            E + L +D+LTNLG GLGR  +G V+MVPF +PGE VR R+    K + +A+LLE++EPSPERV P C  FG CGGC YQHM+  +QR+WK+QQV + L R+ G       V+   G+   Y YRSKLTPHY K           P  E+ +GFLH      I+DV  C IAT+AINE +P  R+  +  S   +                                        G LLLR   +GV ++   +V +++  + +Q+ A  FFQ NP +LP LVDF +++A   G  R+LVDAY G G+F+L  A    F+   G+E+NA AV+ A A+A++NG+K    F  G A ++F  +     +TA IIDPPRAGCD+ F++QLL  GP+RVVYVSCDPSTQARD   L+ GGY + +V PFDLFPQTRHIE V  L
Sbjct:   19 EELELRVDTLTNLGSGLGRV-NGWVVMVPFALPGERVRVRVYRNHKQHSDADLLEIIEPSPERVDPLCPLFGTCGGCQYQHMSYAAQREWKRQQVSELLVRLAGITH---PVNPTHGSPREYHYRSKLTPHYPKPFKPKPGEAATPKREMPIGFLHQGQRNRIVDVPACPIATEAINEALPTERKRIRERSAKLKKG--------------------------------------GTLLLRHTLDGVTTDNNASVTEKIGPVVFQFLAGDFFQNNPFILPELVDFVMERACIDG-VRYLVDAYCGVGVFALCGARR--FERVAGVEVNASAVKWANANAAINGIKN-AEFYIGEAESIFSAINFPGDETAMIIDPPRAGCDEAFIRQLLALGPRRVVYVSCDPSTQARDLKMLLTGGYTLEEVQPFDLFPQTRHIENVAVL 413          
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Match: A0A8J3DDD4_9BACT (23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Cerasicoccus arenae TaxID=424488 RepID=A0A8J3DDD4_9BACT)

HSP 1 Score: 334 bits (856), Expect = 7.260e-108
Identity = 191/435 (43.91%), Postives = 266/435 (61.15%), Query Frame = 1
Query:    7 VSLTIDSLTNLGDGLGRATDGCVLMVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGGCDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRSKLTPHYEKGTGKPAHEVKVGFLHHDSNGIILDVDRCVIATDAINEQMPVMRQEAKLNSVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQGNLLLREVAEGVVSEAK-TVQQEVAGITYQYDAAGFFQTNPSMLPCLVDFAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRHATASASLNGLKGKCTFQAGSAANVFGNVTLTPGQTACIIDPPRAGCDKQFLKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGGYKVLDVTPFDLFPQTRHIEAVMTLERA 1308
            + L +++LTNLG GL R  +  V+MVPF +PGE VRAR+    KNY +A+L++VLEPSP+RV+P C  FGQCGGC YQH+    Q++WK+ QV   + RIGG   + + V    G+ + Y YRSKLTPH+     K   +  +GFL +     I+DV +C IATDAINE +P+ R+  K+++  E+                                     GS   LLLR   EGV+++ + TV ++V G  Y++ A  FFQ NP +LP L+++ ++Q  G  + R+LVDAY G G+F+L+AA    F+   G+EINA A   A  +A+ NG+    TF  G +  +F +++    ++A IIDPPRAGCD+ FL+QLL FGP+R+VYVSCDP+TQARD   L  GGY++  + PFDLFPQTRHIE V TL RA
Sbjct:   22 LELIVETLTNLGHGLAR-DNNWVVMVPFALPGERVRARVFRNHKNYSDADLVDVLEPSPQRVEPPCPLFGQCGGCQYQHLDYTGQKEWKRGQVVDLMERIGG--LENVVVEPVHGSPKEYHYRSKLTPHHPNRQSK---DFPIGFLRYGRRNQIIDVPQCPIATDAINEALPIERK--KIHAKKEKFKR----------------------------------GS--TLLLRHTLEGVITDPRATVSEQVLGKVYEFQAGEFFQNNPFILPELIEYVLEQI-GRVKLRYLVDAYCGVGVFALSAARH--FEQVAGVEINAQAAEQARVNAAANGVTN-ATFTIGKSEAIFASLSFPGEESAMIIDPPRAGCDEVFLRQLLDFGPKRLVYVSCDPATQARDLKILQAGGYQIERIQPFDLFPQTRHIENVATLSRA 408          
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Match: A0A2E8A847_9BACT (23S rRNA (Uracil(1939)-C(5))-methyltransferase RlmD n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E8A847_9BACT)

HSP 1 Score: 333 bits (855), Expect = 9.030e-108
Identity = 190/433 (43.88%), Postives = 260/433 (60.05%), Query Frame = 1
Query:    7 VSLTIDSLTNLGDGLGRATDGCVLMVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGGCDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRSKLTPHYEKGTGKPAHEVKVGFLHHDSNGIILDVDRCVIATDAINEQMPVMRQEAKLNSVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQGNLLLREVAEGVVSEAK-TVQQEVAGITYQYDAAGFFQTNPSMLPCLVDFAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRHATASASLNGLKGKCTFQAGSAANVFGNVTLTPGQTACIIDPPRAGCDKQFLKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGGYKVLDVTPFDLFPQTRHIEAVMTLE 1302
            ++L I+S+TNLG G+ R  +G V+ VPF +PGE++RARI    KNY +A+ +EVLE SP+R++P+C  FG CGGC YQ +  ++Q  WK++QVE +  RIGG +   + V+  + + + YGYRSKLTPHYEK   K     K+GFL + +  +++DV  C IATD+IN+++P  R+E +   V E+                                        G LLLRE  EGVVS  K TV ++V G+ +Q+ A  FFQ NP +LP LVD  + QA        L+DAY G GLFSL+AA    F    G+EI+      A  +A LN ++    F  G A+++F  +   P   + I+DPPR GCD  FL Q + F PQR++YVSCDP+TQARDA  LV+ GY++LDV PFDLFPQTRHIE V+TLE
Sbjct:   19 INLQIESVTNLGLGIAR-DNGWVIQVPFVLPGEMIRARIFRNHKNYSDADCMEVLEYSPDRIEPRCDLFGICGGCQYQSVEYKTQLAWKKKQVEDSFLRIGGLS---VDVNQVVASPKVYGYRSKLTPHYEKN--KDPQNQKIGFLRYGTRKVLVDVPSCPIATDSINQELPSRREEMRSKPVGEKRG--------------------------------------GTLLLRETLEGVVSNPKETVSEKVGGLVFQFKAGEFFQNNPFILPTLVDHVVGQAKPEEN-ESLIDAYCGGGLFSLSAAKH--FKKVFGVEISKDGFEGALRNAKLNQIRN-AEFFLGDASSIFSELENVPRPCSLIVDPPRRGCDSTFLSQAIAFRPQRIIYVSCDPATQARDAKILVEQGYQILDVQPFDLFPQTRHIENVLTLE 403          
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Match: A0A1G3Z3Z0_9BACT (SAM-dependent methyltransferase n=1 Tax=Verrucomicrobia bacterium GWC2_42_7 TaxID=1802430 RepID=A0A1G3Z3Z0_9BACT)

HSP 1 Score: 333 bits (855), Expect = 9.630e-108
Identity = 189/435 (43.45%), Postives = 261/435 (60.00%), Query Frame = 1
Query:    7 VSLTIDSLTNLGDGLGRATDGCVLMVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGGCDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRSKLTPHYEKGTGKPAHEVKVGFLHHDSNGIILDVDRCVIATDAINEQMPVMRQEAKLNSVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQGNLLLREVAEGVVSEAKTVQQEVAGI-TYQYDAAGFFQTNPSMLPCLVDFAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRHATASASLNGLKGKCTFQAGSAANVFGNVTLTPGQTACIIDPPRAGCDKQFLKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGG-YKVLDVTPFDLFPQTRHIEAVMTLER 1305
            + LT+D+LTNLG GLGR  DG V+MVPF++PGE VRARI    KNY EA+L+EV EPSP RVQPKC  FG CGGC YQH++ + Q +WKQQQV++    + G       V+  + +E+ + YRSK+TPH+ K    P +EV +GFL       ++DV++CVIAT+ IN  +P  RQ  K N    +                                        G LLLR+  +G+++  K   +E  G   + + A  FFQ NP +LP ++D+ ++QAS GG A +LVDAY G G+F++AA +   F   VGIE+N+  ++ A  +A L+     C+F  G+A N+F N+ +   +TA IIDPPR GCD+ F++QLL F P R+VYVSC P TQARD   +++   YK+++V P DLFPQTRHIE V  LER
Sbjct:   21 IELTVDTLTNLGVGLGRV-DGWVVMVPFSLPGERVRARIFRNHKNYSEADLIEVTEPSPHRVQPKCDLFGNCGGCQYQHLSYEQQLKWKQQQVKEIFAHLAGIE---TAVNPPLSSEQTFHYRSKITPHFNK----PTNEVDIGFLKQGQRHALVDVEQCVIATERINSVLPCERQALKSNPQKFKRG--------------------------------------GTLLLRDTMDGIMTNPKAPCREKIGEWVFHFTAGEFFQNNPFVLPKMIDYVVKQASAGG-AEYLVDAYCGVGVFAIAAHSL--FKEVVGIEVNSEGIKWAHKNA-LSNHATNCSFIEGNAENIFTNIAVPGNKTAIIIDPPRKGCDEAFIQQLLAFAPARIVYVSCAPDTQARDLKTILQSHPYKLVEVQPIDLFPQTRHIENVCVLER 405          
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Match: A0A7X1B3B5_9BACT (Class I SAM-dependent RNA methyltransferase n=2 Tax=Puniceicoccus vermicola TaxID=388746 RepID=A0A7X1B3B5_9BACT)

HSP 1 Score: 333 bits (854), Expect = 1.360e-107
Identity = 190/435 (43.68%), Postives = 260/435 (59.77%), Query Frame = 1
Query:    7 VSLTIDSLTNLGDGLGRATDGCVLMVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGGCDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRSKLTPHYEKGTGKPAHEVKVGFLHHDSNGIILDVDRCVIATDAINEQMPVMRQEAKLNSVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQGNLLLREVAEGVVSEAKT-VQQEVAGITYQYDAAGFFQTNPSMLPCLVDFAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRHATASASLNGLKGKCTFQAGSAANVFGNVTLTPG-QTACIIDPPRAGCDKQFLKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGGYKVLDVTPFDLFPQTRHIEAVMTLER 1305
            + L+++SLTNLG G+ R  DG V+M+PF++PGE +RAR+   R N+ EA+L+EVLE SP RV PKC  FG CGGC YQ ++  +Q +WKQ QV   L RIGG   + +     IG+ + YGYRSK+TPHY++   +   +  +GFL       I+DV +C IAT AINE +P +R + K      +                                          LLLRE  EGV+++AK  V + V    +Q+ A  FFQ NP +LP   ++  +QAS G R  +L+DAY G GLFSL AA    F+  +GIE++A AV  A ++A+LN ++    F+ G A  +F  V   PG +T+ +IDPPR GCD+ FL+QL  F P R+VYVSCDPSTQARD   L + GY++L++ PFDLFPQTRHIE V+TL+R
Sbjct:   18 LELSVESLTNLGVGVARQ-DGWVIMIPFSLPGEKIRARVFRNRPNFSEADLIEVLEASPNRVDPKCPLFGSCGGCQYQQLSYPAQLEWKQAQVRDALERIGGIENEVLMP---IGSPKEYGYRSKITPHYQRW--RDDGDFPIGFLRVAQRQRIIDVPQCPIATPAINETLPELRAQVKKTPPKGKKKKG------------------------------------ATLLLRETMEGVITDAKALVTERVGNRVFQFKAGEFFQNNPFILPTFANYVTEQASDGSR--YLIDAYCGAGLFSLTAA--DRFEKVIGIEVSAAAVTLADSNAALNSIRN-AEFRNGEAEAIFAEVAEFPGAETSVVIDPPRRGCDEAFLRQLSDFAPSRIVYVSCDPSTQARDLKILEESGYEILEIQPFDLFPQTRHIENVVTLQR 405          
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Match: D7G7Q0_ECTSI (RNA methyltransferase, TrmA family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q0_ECTSI)

HSP 1 Score: 334 bits (856), Expect = 1.990e-106
Identity = 196/449 (43.65%), Postives = 265/449 (59.02%), Query Frame = 1
Query:    1 EVVSLTIDSLTNLGDGLGRATD-GCVLMVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGGCDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRSKLTPHYEKGTGKPAHEV---KVGF--LHH--DSNGI----ILDVDRCVIATDAINEQMPVMRQEAKLNSVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQG-NLLLREVAE-GVVSEAKT-VQQEVAGITYQYDAAGFFQTNPSMLPCLVDFAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRHATASASLNGLKGKCTFQAGSAANVFGNVTLTPGQTACIIDPPRAGCDKQFLKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGGYKVLDVTPFDLFPQTRHIEAVMTLE 1302
            E +++ I+SLTNLG+G+ R  + G V+MVP  IPGELV+ ++     NY EA L+ V EPSP+RV+P C  FG CGGC YQHM++  QR WK QQV   L RIGG       V    G +E YGYRSKLTPHY+        E+   KV F  ++H  D   +    ++DV+RC +AT+ INE +P  RQEA+                                            G +G  LL RE  E G V++    V + V G+ + + A  FFQ NP +LP +VD+ + +A  GG A+ L+DAY G GLF L+A+ +  F+ C GIEI+ +AV  AT +A+ N +   C F AG+A+N+F NV+ TP +T  I+DPPR GCD+ FL QL  F P R+VYVSCDP+TQARDA +++  GY+ +D+ PFDLFPQTRHIE V+T +
Sbjct:   97 EELTVRIESLTNLGEGIAREGETGWVVMVPHVIPGELVKCKVFRNHANYSEATLVSVEEPSPDRVEPNCPLFGMCGGCQYQHMSVSMQRDWKNQQVMDCLTRIGG--MVDPAVKDTFGTDETYGYRSKLTPHYDAPYQGRVREIGFKKVKFPTIYHGVDLGNVNPSKVVDVERCPLATEGINESLPPARQEAR-----------------------------ERVQAAFDSGDGKRVGKRGATLLFRETTEEGTVTDNNAHVSERVGGMVFNFKAGEFFQNNPYVLPHMVDYVVARAKEGG-AKNLIDAYCGGGLFCLSASTS--FEKCAGIEISPMAVDCATRNAATNDISN-CLFLAGTASNIFANVSFTPSETVVIVDPPRKGCDQLFLGQLFKFRPTRLVYVSCDPATQARDAKEIMANGYEAVDIQPFDLFPQTRHIENVITFQ 510          
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Match: A0A2E6TCI3_9BACT (SAM-dependent methyltransferase n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E6TCI3_9BACT)

HSP 1 Score: 328 bits (841), Expect = 1.090e-105
Identity = 186/434 (42.86%), Postives = 256/434 (58.99%), Query Frame = 1
Query:    7 VSLTIDSLTNLGDGLGRATDGCVLMVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGGCDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRSKLTPHYEKGTGKPAHEVKVGFLHHDSNGIILDVDRCVIATDAINEQMPVMRQEAKLNSVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQGNLLLREVAEGVVSEAKTVQQEVAGI-TYQYDAAGFFQTNPSMLPCLVDFAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRHATASASLNGLKGKCTFQAGSAANVFGNVTLTPGQTACIIDPPRAGCDKQFLKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGGYKVLDVTPFDLFPQTRHIEAVMTLER 1305
            +SL I+SLTNLG G+ R  +G V++VP  +PGE V+ARI    KNY +A+LL+VLEPSP+RV P C  F  CGGC YQH   + Q +WK++ V     RI G  F  +       +   YGYRSKLTPH++KG   P    ++GFL       ++DV+ C IATDAIN+ +P  R+E + N   +                                         G LLLR+  EGVV+  + +  E  G   +Q+ A  FFQ NP +L  +V++ + QA+G     +LVDAY G GLF+++A+    F  CVG+EI+A A + A A+A++N L   C F  GSA+ VF  V  T  + A +IDPPR GCD+ FL+Q + F P+R+VYVSCDP+TQARD   L+KGG+ V+++ PFDLFPQTRH+E++ TLER
Sbjct:   19 LSLAIESLTNLGQGVAR-DNGWVILVPGVLPGETVQARIYRNHKNYSDADLLKVLEPSPQRVTPSCALFETCGGCQYQHFAYEGQLEWKRRHVSDAFARIAGLEFDALPTRP---SPRPYGYRSKLTPHFQKG---PEGIGEIGFLQQGRRRALIDVEHCPIATDAINDHLPSARKELRENWTGKRG---------------------------------------GTLLLRDTMEGVVTNPEEIVTERVGKRVFQFKAGEFFQNNPFLLGSMVEYVVDQAAGT-EIEYLVDAYCGSGLFAISAS--DRFAQCVGVEISAEAAQWARANAAINRLSN-CEFILGSASEVFEEVPFTGEKAALVIDPPRKGCDQDFLRQAIAFEPRRIVYVSCDPATQARDVEFLLKGGFHVVNIQPFDLFPQTRHVESIATLER 402          
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Match: A0A7S3USM6_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3USM6_HETAK)

HSP 1 Score: 330 bits (845), Expect = 3.050e-105
Identity = 197/455 (43.30%), Postives = 258/455 (56.70%), Query Frame = 1
Query:    1 EVVSLTIDSLTNLGDGLGR-ATDGCVLMVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGGCDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRSKLTPHYEKGTGKPAHEVKVGFLHH--------DSNGI---------ILDVDRCVIATDAINEQMPVMRQEAKLNSVMEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSQGNLLLREVAEGV-VSEAKTVQQEVAGI--TYQYDAAGFFQTNPSMLPCLVDFAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRHATASASLNGLKGKCTFQAGSAANVFGNVTLTPGQTACIIDPPRAGCDKQFLKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGGYKVLDVTPFDLFPQTRHIEAVMTLE 1302
            E + L I++LTN G GLGR   DG V+MVP TIPGE V+  +     +Y EA LLEVLEPSP R+ PKC+YFG CGGC YQHM +++QR WK +QVE+ LRR+GG       V+   G  E +GYRSKLTPHY+    +   E  +GF           +  GI         ILDV RC IATDAIN ++  +R E +                                                 LLLR+  +GV   + K V +EV G+   +++ A  FFQ NP +LP +V++ + +A   G  + L+D Y G GLF L+A+    F+ C G+EI+  ++  A  +A+LN L   C F AG + N+FGNVT  P +TA IIDPPR GCD++FL QL  F P RVVYVSCDP+TQARD   +V+ GY V D+ PFDLFPQTRHIE V+T +
Sbjct:   19 EQIELEIETLTNTGSGLGRYGPDGWVIMVPHTIPGEKVKVGVHRNFDSYSEATLLEVLEPSPSRISPKCKYFGICGGCQYQHMDLETQRHWKTKQVEEALRRLGGL-ADAQAVNPAFGTAEAFGYRSKLTPHYD--VPRQGEESAIGFKRMTMPTIYELEQRGIDLSTVDRREILDVARCEIATDAINARLGSLRAETRA--------------------LVAGQLSGEIEVPKKKGKRKHSRPMGATLLLRDALDGVETDQTKDVYEEVRGVGLRFEFKAGEFFQNNPFVLPHMVEYVLNKAKAPGVTK-LLDTYCGGGLFCLSASPH--FEECAGVEISEASIASAKRNAALNKLDN-CNFIAGRSENIFGNVTFNPEETAIIIDPPRKGCDQKFLDQLFAFSPARVVYVSCDPATQARDTKIMVEAGYAVTDIQPFDLFPQTRHIENVITFD 446          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1020.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8G0XYR8_9BACT1.290e-11445.45Class I SAM-dependent RNA methyltransferase n=1 Ta... [more]
A0A835YJC5_9STRA2.840e-11044.62RNA methyltransferase, TrmA family n=1 Tax=Tribone... [more]
A0A842HHT9_9BACT1.460e-10943.99Class I SAM-dependent RNA methyltransferase n=1 Ta... [more]
A0A8J3DDD4_9BACT7.260e-10843.9123S rRNA (Uracil-5-)-methyltransferase RumA n=2 Ta... [more]
A0A2E8A847_9BACT9.030e-10843.8823S rRNA (Uracil(1939)-C(5))-methyltransferase Rlm... [more]
A0A1G3Z3Z0_9BACT9.630e-10843.45SAM-dependent methyltransferase n=1 Tax=Verrucomic... [more]
A0A7X1B3B5_9BACT1.360e-10743.68Class I SAM-dependent RNA methyltransferase n=2 Ta... [more]
D7G7Q0_ECTSI1.990e-10643.65RNA methyltransferase, TrmA family n=1 Tax=Ectocar... [more]
A0A2E6TCI3_9BACT1.090e-10542.86SAM-dependent methyltransferase n=1 Tax=Opitutae b... [more]
A0A7S3USM6_HETAK3.050e-10543.30Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1020contigC-australica_Contig_1020:2415..3920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G7Q0
Preferred nameTRM2
PFAMsTRAM,tRNA_U5-meth_tr
Model size1349
Max annot lvl2759|Eukaryota
KEGG koko:K15331
Hectar predicted targeting categoryother localisation
GOsGO:0000014,GO:0001510,GO:0003674,GO:0003824,GO:0004518,GO:0004519,GO:0004520,GO:0004527,GO:0004529,GO:0004536,GO:0006139,GO:0006259,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0008168,GO:0008173,GO:0008175,GO:0008309,GO:0008409,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016300,GO:0016740,GO:0016741,GO:0016787,GO:0016788,GO:0016796,GO:0016895,GO:0030488,GO:0030696,GO:0032259,GO:0034470,GO:0034641,GO:0034660,GO:0035312,GO:0043170,GO:0043412,GO:0043414,GO:0044237,GO:0044238,GO:0044260,GO:0046483,GO:0051908,GO:0071704,GO:0090304,GO:0090305,GO:0140097,GO:0140098,GO:0140101,GO:1901360
Exons3
Evalue4.78e-100
EggNOG OGsCOG2265@1|root,KOG2187@2759|Eukaryota
EC2.1.1.35
DescriptionS-adenosylmethionine-dependent tRNA (m5U54) methyltransferase activity
Cds size1248
COG categoryJ
BRITEko00000,ko01000,ko03016
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586758.0629723-UTR-C-australica_Contig_1020:2414..24921682586758.0629723-UTR-C-australica_Contig_1020:2414..2492Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1020 2415..2492 +
1682586758.1028295-UTR-C-australica_Contig_1020:3897..39201682586758.1028295-UTR-C-australica_Contig_1020:3897..3920Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1020 3898..3920 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586758.0750198-CDS-C-australica_Contig_1020:2492..24951682586758.0750198-CDS-C-australica_Contig_1020:2492..2495Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1020 2493..2495 +
1682586758.0839415-CDS-C-australica_Contig_1020:2589..28691682586758.0839415-CDS-C-australica_Contig_1020:2589..2869Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1020 2590..2869 +
1682586758.0931835-CDS-C-australica_Contig_1020:2932..38971682586758.0931835-CDS-C-australica_Contig_1020:2932..3897Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1020 2933..3897 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1020.3.1prot_C-australica_Contig_1020.3.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1020 2493..3897 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1020.3.1

>prot_C-australica_Contig_1020.3.1 ID=prot_C-australica_Contig_1020.3.1|Name=mRNA_C-australica_Contig_1020.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=416bp
MVPFTIPGELVRARITSQRKNYFEAELLEVLEPSPERVQPKCQYFGQCGG
CDYQHMTIQSQRQWKQQQVEQTLRRIGGTNFQGITVSGCIGNEEGYGYRS
KLTPHYEKGTGKPAHEVKVGFLHHDSNGIILDVDRCVIATDAINEQMPVM
RQEAKLNSVMEEEEEESAAGGRGEGRKRKGKRSSCSSSSNRTASSSRRRG
SQGNLLLREVAEGVVSEAKTVQQEVAGITYQYDAAGFFQTNPSMLPCLVD
FAIQQASGGGRARFLVDAYAGCGLFSLAAAAAGAFDSCVGIEINALAVRH
ATASASLNGLKGKCTFQAGSAANVFGNVTLTPGQTACIIDPPRAGCDKQF
LKQLLHFGPQRVVYVSCDPSTQARDAAQLVKGGYKVLDVTPFDLFPQTRH
IEAVMTLERASQSKF*
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mRNA from alignment at C-australica_Contig_1020:2415..3920+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1020.3.1 ID=mRNA_C-australica_Contig_1020.3.1|Name=mRNA_C-australica_Contig_1020.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1506bp|location=Sequence derived from alignment at C-australica_Contig_1020:2415..3920+ (Chrysoparadoxa australica CS_1217)
GAAGTCGTTTCCCTGACAATCGACAGCTTAACGAACCTTGGGGACGGACT TGGCAGAGCTACAGACGGATGCGTACTCATGGTAAGCTGGGAGCACCTTG ACAACCATCCACCTCGTCGAGATGTTGGGCTCTCCCACACCCCACAACAA CCATGCTGATCCCCCCCCTCCGCAGGTACCTTTCACAATCCCTGGGGAAC TTGTCCGTGCTCGCATAACGTCTCAACGGAAGAACTATTTTGAGGCAGAA CTGCTGGAGGTGCTGGAGCCGAGCCCGGAGAGGGTGCAGCCAAAGTGCCA GTATTTTGGTCAATGTGGAGGCTGTGATTACCAGCACATGACCATCCAGA GTCAGCGGCAATGGAAGCAGCAGCAAGTGGAACAGACCTTGAGACGCATT GGAGGGACTAACTTCCAAGGGATAACGGTCTCAGGCTGCATAGGCAATGA AGAAGGTGAAGTAGGAAAAATGGATGCCCTATTTGGGTTTTAGCTGACGC TCTCCTCCTTCCCGGAAGGCTACGGCTATCGCTCCAAGTTGACGCCTCAT TACGAGAAAGGCACCGGGAAACCTGCTCATGAGGTGAAAGTTGGCTTCCT GCACCATGACAGTAATGGCATCATTCTGGACGTTGACCGCTGTGTCATTG CCACCGATGCCATTAATGAGCAAATGCCAGTCATGCGACAGGAGGCCAAA CTCAATTCAGTGATGGAGGAAGAAGAGGAGGAGAGTGCAGCTGGTGGGAG GGGGGAGGGTCGGAAGAGGAAAGGGAAGCGCAGCAGCTGCAGCAGCAGTA GCAACAGAACTGCCAGCTCCAGCAGACGCCGAGGCAGTCAGGGAAATTTG CTGTTGAGAGAAGTGGCGGAAGGTGTGGTCTCGGAGGCCAAAACAGTCCA ACAAGAGGTAGCTGGAATCACGTATCAGTACGACGCGGCTGGGTTCTTCC AAACCAACCCGTCCATGCTACCCTGCCTGGTGGACTTTGCCATACAGCAG GCTAGTGGCGGCGGTAGAGCTAGATTTTTGGTTGATGCATACGCTGGCTG TGGGTTATTCAGCCTGGCAGCAGCGGCGGCAGGTGCATTTGACAGCTGCG TTGGCATTGAGATAAACGCGCTGGCCGTGCGACACGCAACGGCGAGTGCC AGCCTTAATGGGCTGAAGGGGAAGTGCACATTCCAGGCAGGCTCGGCTGC CAACGTGTTTGGCAATGTCACGCTGACGCCGGGACAGACAGCTTGCATTA TTGATCCCCCCAGGGCAGGCTGTGACAAGCAGTTCCTGAAGCAGCTGCTG CACTTCGGGCCTCAACGGGTCGTGTACGTGAGCTGTGACCCATCGACACA AGCCAGGGATGCAGCACAGCTAGTGAAGGGGGGGTATAAGGTCTTGGATG TGACACCCTTCGATCTCTTTCCCCAAACGCGTCACATTGAGGCAGTCATG ACGCTTGAGCGTGCGTCACAGTCAAAATTCTAATCCCAATTAACGTTTTC CAAAGC
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Coding sequence (CDS) from alignment at C-australica_Contig_1020:2415..3920+

>mRNA_C-australica_Contig_1020.3.1 ID=mRNA_C-australica_Contig_1020.3.1|Name=mRNA_C-australica_Contig_1020.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1248bp|location=Sequence derived from alignment at C-australica_Contig_1020:2415..3920+ (Chrysoparadoxa australica CS_1217)
ATGGTACCTTTCACAATCCCTGGGGAACTTGTCCGTGCTCGCATAACGTC
TCAACGGAAGAACTATTTTGAGGCAGAACTGCTGGAGGTGCTGGAGCCGA
GCCCGGAGAGGGTGCAGCCAAAGTGCCAGTATTTTGGTCAATGTGGAGGC
TGTGATTACCAGCACATGACCATCCAGAGTCAGCGGCAATGGAAGCAGCA
GCAAGTGGAACAGACCTTGAGACGCATTGGAGGGACTAACTTCCAAGGGA
TAACGGTCTCAGGCTGCATAGGCAATGAAGAAGGCTACGGCTATCGCTCC
AAGTTGACGCCTCATTACGAGAAAGGCACCGGGAAACCTGCTCATGAGGT
GAAAGTTGGCTTCCTGCACCATGACAGTAATGGCATCATTCTGGACGTTG
ACCGCTGTGTCATTGCCACCGATGCCATTAATGAGCAAATGCCAGTCATG
CGACAGGAGGCCAAACTCAATTCAGTGATGGAGGAAGAAGAGGAGGAGAG
TGCAGCTGGTGGGAGGGGGGAGGGTCGGAAGAGGAAAGGGAAGCGCAGCA
GCTGCAGCAGCAGTAGCAACAGAACTGCCAGCTCCAGCAGACGCCGAGGC
AGTCAGGGAAATTTGCTGTTGAGAGAAGTGGCGGAAGGTGTGGTCTCGGA
GGCCAAAACAGTCCAACAAGAGGTAGCTGGAATCACGTATCAGTACGACG
CGGCTGGGTTCTTCCAAACCAACCCGTCCATGCTACCCTGCCTGGTGGAC
TTTGCCATACAGCAGGCTAGTGGCGGCGGTAGAGCTAGATTTTTGGTTGA
TGCATACGCTGGCTGTGGGTTATTCAGCCTGGCAGCAGCGGCGGCAGGTG
CATTTGACAGCTGCGTTGGCATTGAGATAAACGCGCTGGCCGTGCGACAC
GCAACGGCGAGTGCCAGCCTTAATGGGCTGAAGGGGAAGTGCACATTCCA
GGCAGGCTCGGCTGCCAACGTGTTTGGCAATGTCACGCTGACGCCGGGAC
AGACAGCTTGCATTATTGATCCCCCCAGGGCAGGCTGTGACAAGCAGTTC
CTGAAGCAGCTGCTGCACTTCGGGCCTCAACGGGTCGTGTACGTGAGCTG
TGACCCATCGACACAAGCCAGGGATGCAGCACAGCTAGTGAAGGGGGGGT
ATAAGGTCTTGGATGTGACACCCTTCGATCTCTTTCCCCAAACGCGTCAC
ATTGAGGCAGTCATGACGCTTGAGCGTGCGTCACAGTCAAAATTCTAA
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