Homology
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match:
A0A6H5K3J5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3J5_9PHAE)
HSP 1 Score: 221 bits (562), Expect = 1.550e-60
Identity = 146/287 (50.87%), Postives = 180/287 (62.72%), Query Frame = 1
Query: 64 GLLKAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSPDGFLLASASGNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESLEFFCASPPDSSPVVSLGFSSNGSEVYAASHSSLRCITWDNDTAVAQVERSGEMSWG--GVQAMHITAEKQ 918
G FKAHE+VAH+ NCV +GPRSG VLATGG+DKRVNVW++GRAS+IWSLTGNSS IE+L FDP EE LVSGS+GGAVKL+DL GK+ R+FRGHMSNVT I+ G+FDR+F+TT FSPDG +LASA+ +G+ XXXXXXXXXXXXXXXXXXXXXX E +E FC + PD+ P ++ F +G ++Y AS S LR +WDN A AQ+E G++ WG G A+H A+ Q
Sbjct: 10 GSFAGFKAHEFVAHAGKTNCVAVGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSGIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVTTGSMDCQVTDVQ---------------------FSPDGHILASAAADGQVKLWDLRAGKPMHTFQACSGAVRAIXXXXXXXXXXXXXXXXXXXXXXXEFMELFCPTAPDTCPTRAITFDPDGQKMYCASPSGLRRWSWDNHIASAQLEAMGDVPWGKVGAGALHYNADGQ 275
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match:
D8LQ17_ECTSI (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ17_ECTSI)
HSP 1 Score: 221 bits (562), Expect = 1.730e-60
Identity = 198/287 (68.99%), Postives = 231/287 (80.49%), Query Frame = 1
Query: 64 GLLKAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSPDGFLLASASGNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESLEFFCASPPDSSPVVSLGFSSNGSEVYAASHSSLRCITWDNDTAVAQVERSGEMSWG--GVQAMHITAEKQ 918
G AFKAHE+VAH+ NCV +GPRSG VLATGG+DKRVNVW++GRAS+IWSLTGNSS IE+L FDP EE LVSGS+GGAVKL+DL GK+ R+FRGHMSNVT I+ G+FDR+F+ XXXXXXXXXXXXXXXXXXXXXXXXXXXX FSPDG +LASA+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E +E FC + PD+ P ++ F +G ++Y AS S LR +WDNDTA A++E G++ WG G A+H A+ Q
Sbjct: 10 GSFAAFKAHEFVAHAGKTNCVAVGPRSGQVLATGGDDKRVNVWRIGRASSIWSLTGNSSAIESLRFDPTEEFLVSGSAGGAVKLFDLSAGKMTRHFRGHMSNVTVIDCGSFDRRFVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTDVQFSPDGHILASAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEFMELFCPTAPDTCPTRAITFDPDGQKMYCASPSGLRRWSWDNDTASARLEAMGDVPWGKVGAGALHYNADGQ 296
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match:
A0A836CLK5_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLK5_9STRA)
HSP 1 Score: 197 bits (500), Expect = 1.710e-53
Identity = 141/307 (45.93%), Postives = 167/307 (54.40%), Query Frame = 1
Query: 79 FKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSPDGFLLASASGNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXV------ESLEFFCASPPDSSPVVSLGFSSNGSEVYAASHSSLRCITWDNDTAVAQVERSGEMSWGGVQAMHITAEKQVVAASCASNFVTVWAVDLDDA 981
FKAHE+VAHST VNCV IGP GAVLATGGEDKRVNVWK+GRA++IWSL GNSSPIE + FD EE L SGSSGGAVK YDL VGK+ RNFRGHMSNVTA+ GAFD ++ T FSPDGFLLAS + +G+ XXXXXXXXXXXXXXXXX E +E FCA+ P+SS ++ F++ G+ +A+H E QVVAA+ SNFV++WA D+DDA
Sbjct: 13 FKAHEFVAHSTKVNCVAIGPH-GAVLATGGEDKRVNVWKIGRANHIWSLAGNSSPIECVCFDHAEENLYSGSSGGAVKQYDLTVGKMARNFRGHMSNVTALHSGAFDSAYLATGALDCVVKVWNTATKECVMAFKGHGAEVCEVQFSPDGFLLASGARDGDVRIWDVRAGKLLHAFAACGGGSGGGSGVRAXXXXXXXXXXXXXXXXXXXXXXXXEEMELFCATSPESSQFHAMAFNAEGN-----------------------------------RALHYNPEGQVVAATSTSNFVSIWAFDVDDA 283
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match:
A0A482STH4_9ARCH (Katanin_con80 domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482STH4_9ARCH)
HSP 1 Score: 121 bits (304), Expect = 3.270e-26
Identity = 55/105 (52.38%), Postives = 75/105 (71.43%), Query Frame = 1
Query: 73 KAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEY 387
++ + E+VAHST VNC+ +G +S VLATGGED +VN+W+VG SNIW+L N SPIE L FD E +VSG+ G++K++DL GKL RN H NVT+++Y
Sbjct: 8 ESVRVQEFVAHSTQVNCLALGSKSSQVLATGGEDAKVNIWRVGSVSNIWTLGQNKSPIECLCFDADELCVVSGAMNGSLKVFDLNEGKLARNLGSHQVNVTSVQY 112
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match:
F0YMU1_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMU1_AURAN)
HSP 1 Score: 112 bits (279), Expect = 6.010e-25
Identity = 56/103 (54.37%), Postives = 68/103 (66.02%), Query Frame = 1
Query: 76 AFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGR----ASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNV 372
A K HE+VA +V CV +GPRS VLA+GGEDKR NVW++ A N+WSL GNSSPI L FD E LVSG+ GG+V+LYDL G+ R GH + V
Sbjct: 3 AAKLHEWVASPAVVTCVALGPRSHQVLASGGEDKRANVWRLRPGDPGAQNVWSLGGNSSPISCLCFDDAENTLVSGAQGGSVRLYDLTEGRCARALNGHRNEV 105
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match:
A0A1D1UXW2_RAMVA (Katanin p80 WD40 repeat-containing subunit B1 n=1 Tax=Ramazzottius varieornatus TaxID=947166 RepID=A0A1D1UXW2_RAMVA)
HSP 1 Score: 115 bits (289), Expect = 2.680e-24
Identity = 88/301 (29.24%), Postives = 130/301 (43.19%), Query Frame = 1
Query: 73 KAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSPDGFLLASASGNGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVESLEFFCASPPDSSPVVSLGFSSNGSEVYAASHSSLRCITWDNDTAVAQVERSGEMSWGGVQAMHIT-AEKQVVAASCASNFVTVWAVDL 972
K K E AHS+ V CV +G +G VLATGG D VN+W +G+ + + SL G SS E + FDP EE + +GSS GA+K++D++ K++RN GH + VTA+++ +FD FM + XXXXX FSP G + S +G +E+ E ++ DSSPV + F +GS + A L+ W+ + + WG V M ++ + Q+V AS V + VDL
Sbjct: 6 KITKIQELEAHSSAVTCVALGQLNGRVLATGGADCFVNLWVLGQKTALKSLPGLSSAAECVRFDPTEESVAAGSSSGALKIWDIEADKIKRNLTGHKTGVTALDFLSFDPNFMVSGSADCTXXXXXLRRKTCVVSYKGHQDTVREVLFSPHGKWITSGGIDGTIQIYQWQAGKSLKELIHAKAAVYSLAFHPKDLLLASTGQDGVVKFWDLETFEVVSSTEKDSSPVRCIRFQKDGSSLLAGCDDMLKVFGWEPAVCHDVIP----VGWGRVADMAVSGSSSQLVTASAGKTSVATYLVDL 302
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match:
A0A1B6FE44_9HEMI (Uncharacterized protein (Fragment) n=2 Tax=Cicadellinae TaxID=33370 RepID=A0A1B6FE44_9HEMI)
HSP 1 Score: 105 bits (261), Expect = 5.770e-24
Identity = 46/102 (45.10%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 73 KAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTA 378
+ +K E+ AHS VNC+ +G +SG VL TGG+DK+VN+W +G+ + I SL G+ +P+E + F+ EEL+ +GSSGG +K++DL+ K+ R GH S + A
Sbjct: 7 RLWKVQEFKAHSANVNCLALGQKSGRVLVTGGDDKKVNLWAIGKNNCIMSLNGHITPVETVRFNHTEELVAAGSSGGVLKIWDLEATKIMRTLTGHRSGLRA 108
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match:
A0A7S2CHB8_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2CHB8_9DINO)
HSP 1 Score: 105 bits (262), Expect = 1.610e-23
Identity = 45/105 (42.86%), Postives = 74/105 (70.48%), Query Frame = 1
Query: 73 KAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEY 387
+ +K EY AH+ C +G +SG VLATGGED+RVN+WKVG+++ + SLTG++S +E L FD EE+LV G +GG++++++L+ K+ GH + +++E+
Sbjct: 43 RVWKLQEYTAHAGCTRCARLGEKSGQVLATGGEDRRVNIWKVGKSNAMMSLTGHNSTVECLVFDKQEEVLVVGCAGGSMQVWNLEYRKMAGTLTGHRTGCSSVEF 147
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match:
A0A3B4BK80_9GOBI (Katanin p80 (WD repeat containing) subunit B 1 n=1 Tax=Periophthalmus magnuspinnatus TaxID=409849 RepID=A0A3B4BK80_9GOBI)
HSP 1 Score: 105 bits (261), Expect = 1.620e-22
Identity = 57/153 (37.25%), Postives = 83/153 (54.25%), Query Frame = 1
Query: 91 EYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTFSPDGFLLASAS 549
E+ AH++ V+C+ +G SG +LATGGED RVN+W V +A+ I SLTG+ SP+E L + EE +V+GS G++K++DL+ KLR GH +N+T++ F+ + FSPDG LASAS
Sbjct: 14 EFEAHTSRVSCLSLGKSSGRLLATGGEDCRVNIWAVSKANCIMSLTGSKSPVECLQLNASEEQVVAGSQSGSIKIWDLEAAKLR-TLMGHKANITSLGCHPLSENFLASSSMDTNIKLWDVRRKGYILRYQGHTDAVRSLAFSPDGKWLASAS 165
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Match:
A0A383W973_TETOB (Katanin p80 WD40 repeat-containing subunit B1 homolog n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W973_TETOB)
HSP 1 Score: 110 bits (274), Expect = 2.400e-22
Identity = 50/116 (43.10%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 70 LKAFKAHEYVAHSTLVNCVVIGPRSGAVLATGGEDKRVNVWKVGRASNIWSLTGNSSPIEALAFDPMEELLVSGSSGGAVKLYDLQVGKLRRNFRGHMSNVTAIEYGAFDRKFMTT 417
++++K E+VAHS VNC+ IG + VLATGGEDK+VN+W++G+ I +L G +SP+E + FDP E+ + +G++ G VK++DL GK+ + GH SN IE+G + + T
Sbjct: 1 MRSYKLDEFVAHSGAVNCLRIGRNTAGVLATGGEDKKVNLWRIGQPHVIQTLVGLNSPVECVTFDPAEDKVGAGAANGTVKVWDLDTGKVCCSLTGHRSNCLTIEFGPPESNIVVT 116
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_102.2.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 1.55e-60 / Id = 50.87 Expect = 1.73e-60 / Id = 68.99 Expect = 1.71e-53 / Id = 45.93 Expect = 3.27e-26 / Id = 52.38 Expect = 6.01e-25 / Id = 54.37 Expect = 2.68e-24 / Id = 29.24 Expect = 5.77e-24 / Id = 45.10 Expect = 1.61e-23 / Id = 42.86 Expect = 1.62e-22 / Id = 37.25 Expect = 2.40e-22 / Id = 43.10 Sequence A0A6H5K3J5_9PHAE D8LQ17_ECTSI A0A836CLK5_9STRA A0A482STH4_9ARCH F0YMU1_AURAN A0A1D1UXW2_RAMVA A0A1B6FE44_9HEMI A0A7S2CHB8_9DINO A0A3B4BK80_9GOBI A0A383W973_TETOB Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 0 Seed ortholog 2880.D8LQ17 Preferred name KATNB1 PFAMs Katanin_con80,WD40 Model size 1212 Max annot lvl 2759|Eukaryota KEGG ko ko:K18643 Hectar predicted targeting category other localisation GOs GO:0000151,GO:0000226,GO:0000922,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005813,GO:0005815,GO:0005819,GO:0005829,GO:0005856,GO:0005874,GO:0005875,GO:0005886,GO:0006605,GO:0006810,GO:0006886,GO:0006996,GO:0007010,GO:0007017,GO:0007026,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008017,GO:0008092,GO:0008104,GO:0008150,GO:0008352,GO:0009987,GO:0010638,GO:0010639,GO:0010720,GO:0010941,GO:0010942,GO:0010975,GO:0010976,GO:0015031,GO:0015630,GO:0015631,GO:0015833,GO:0016020,GO:0016043,GO:0022008,GO:0030154,GO:0030424,GO:0030426,GO:0030427,GO:0030496,GO:0030901,GO:0031110,GO:0031111,GO:0031112,GO:0031114,GO:0031117,GO:0031344,GO:0031346,GO:0031461,GO:0032501,GO:0032502,GO:0032886,GO:0032991,GO:0033036,GO:0033043,GO:0033267,GO:0034613,GO:0036477,GO:0042886,GO:0042995,GO:0043005,GO:0043025,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043242,GO:0043243,GO:0043244,GO:0044297,GO:0044422,GO:0044424,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044463,GO:0044464,GO:0044877,GO:0045184,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046907,GO:0046982,GO:0046983,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051013,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051493,GO:0051494,GO:0051495,GO:0051641,GO:0051649,GO:0051960,GO:0051962,GO:0060284,GO:0060322,GO:0065007,GO:0070507,GO:0070727,GO:0070840,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0080008,GO:0097458,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0120025,GO:0120035,GO:0120038,GO:0150034,GO:1901879,GO:1901880,GO:1901881,GO:1902494,GO:1902903,GO:1902904,GO:1902905,GO:1990234,GO:2000026 Exons 15 Evalue 2.83e-61 EggNOG OGs KOG0267@1|root,KOG0267@2759|Eukaryota Description microtubule severing Cds size 1212 COG category E BRITE ko00000,ko04812
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586754.6681244-CDS-C-australica_Contig_102:1918..2032 1682586754.6681244-CDS-C-australica_Contig_102:1918..2032 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 1919..2032 + 1682586754.683362-CDS-C-australica_Contig_102:2106..2155 1682586754.683362-CDS-C-australica_Contig_102:2106..2155 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 2107..2155 + 1682586754.6935065-CDS-C-australica_Contig_102:2237..2347 1682586754.6935065-CDS-C-australica_Contig_102:2237..2347 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 2238..2347 + 1682586754.704184-CDS-C-australica_Contig_102:2424..2506 1682586754.704184-CDS-C-australica_Contig_102:2424..2506 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 2425..2506 + 1682586754.716067-CDS-C-australica_Contig_102:2604..2667 1682586754.716067-CDS-C-australica_Contig_102:2604..2667 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 2605..2667 + 1682586754.7273095-CDS-C-australica_Contig_102:2773..2839 1682586754.7273095-CDS-C-australica_Contig_102:2773..2839 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 2774..2839 + 1682586754.7350118-CDS-C-australica_Contig_102:2963..3029 1682586754.7350118-CDS-C-australica_Contig_102:2963..3029 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 2964..3029 + 1682586754.7478297-CDS-C-australica_Contig_102:3259..3295 1682586754.7478297-CDS-C-australica_Contig_102:3259..3295 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 3260..3295 + 1682586754.7560809-CDS-C-australica_Contig_102:3396..3488 1682586754.7560809-CDS-C-australica_Contig_102:3396..3488 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 3397..3488 + 1682586754.7642806-CDS-C-australica_Contig_102:3647..3720 1682586754.7642806-CDS-C-australica_Contig_102:3647..3720 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 3648..3720 + 1682586754.7736168-CDS-C-australica_Contig_102:3864..3965 1682586754.7736168-CDS-C-australica_Contig_102:3864..3965 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 3865..3965 + 1682586754.7838066-CDS-C-australica_Contig_102:4180..4246 1682586754.7838066-CDS-C-australica_Contig_102:4180..4246 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 4181..4246 + 1682586754.7951934-CDS-C-australica_Contig_102:4440..4536 1682586754.7951934-CDS-C-australica_Contig_102:4440..4536 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 4441..4536 + 1682586754.804317-CDS-C-australica_Contig_102:4603..4725 1682586754.804317-CDS-C-australica_Contig_102:4603..4725 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 4604..4725 + 1682586754.8118777-CDS-C-australica_Contig_102:4987..5063 1682586754.8118777-CDS-C-australica_Contig_102:4987..5063 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_102 4988..5063 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_102.2.1
>prot_C-australica_Contig_102.2.1 ID=prot_C-australica_Contig_102.2.1|Name=mRNA_C-australica_Contig_102.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=404bp
PSPPHLAPCPPIPMLGIYQQQGLLKAFKAHEYVAHSTLVNCVVIGPRSGA back to top mRNA from alignment at C-australica_Contig_102:1919..5063+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_102.2.1 ID=mRNA_C-australica_Contig_102.2.1|Name=mRNA_C-australica_Contig_102.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3145bp|location=Sequence derived from alignment at C-australica_Contig_102:1919..5063+ (Chrysoparadoxa australica CS_1217)CCTTCGCCGCCGCATCTTGCCCCTTGTCCCCCCATCCCGATGCTGGGGAT
CTACCAACAGCAGGGCTTGTTAAAGGCATTCAAGGCCCATGAATATGTAG
CCCACAGCACACTG GTCAGTTATCCCTCGATGCGGTGGTCTATAGCAGTA
ACCAGCCTGACTTGGCCTGGATCTCCCCTCCCAACCAGGTGAACTGTGTC
GTGATAGGGCCCAGGAGCGGTGCAGTCTTAGCAACAG GTGAGGGGAAGGA
ATGATCTTTTGCCAGACTGGCTATGGATGGCATTGATCTGATTTGGATTG
GTTCGTCTAAATTCTTAAGGTGGGGAAGATAAGCGCGTAAATGTATGGAA
GGTGGGCCGCGCCAGCAACATTTGGAGCCTCACTGGCAACAGCTCACCCA
TTGAAGCCTTGGCATTTGACCCAATGGAG GTGAGTAGGCTGGCCTGGTGT
CTGAGCCCAGCCCCAGCCTTACGTGAGCTGACCCTGTGATGGGTTGCTAC
CGTCAGGAGCTTTTAGTCAGTGGTAGCAGTGGTGGGGCAGTCAAGTTGTA
CGACTTGCAAGTGGGAAAGCTGCGGCGAAACTTTAGAG GTAACCCTGCTT
TATTGATTCATCATCACCTGAGCCCTTCCTGTAACTTCTGCACGAGGGAT
CCATACAATCCCACGTTAAACTTTGACCCTCTTCAGGTCACATGAGCAAT
GTCACTGCAATAGAGTACGGTGCCTTTGACAGGAAGTTCATGACTACAG G
TCAGGAGGTTGCCTGTTTAACAGCTCCTCAACCAGCGCAATGTCTCAAGC
TACCCTTGCTGCATTTTTTCACGTACCTGCGCTGAAGTTAAGTAACCTAC
CTCAGGATCCATGGACACGGTTGTGAAACTCTGGGGCATTGACTCGAAGG
AGTGCGCCATGTCTTTCAAGG GTGAGCAGCTGCCTCTGCTCCACCAGCAT
TGATGCTGACATGAATGGCTAGACTTAGTTACTGAGTCCATGCTTGGATG
TAACCTCTGGCTTGAGCTGCGCTGATGTACTCTTCTCTTTGCTAGGCCAC
TCATCCCAGGTAACCGCAGTGACCTTCAGCCCTGATGGGTTTCTGCTGGC
TTCTGCCTCTG GTGAGTGAGAATTGAACTGAGAGAAAACCGACTTGAGGG
ATGAGCGGAAGGGTGTGCATGTATGCCAATGTGAATTCGATTGATTTTGG
CCTGTATGATTGGTTTCAAAAGAGAGGGGAGTAAGGTCATGCAGACCAGA
GCAGGAGAGCTTTGAGGCATCATGGGCTCAATACTTTCTCTCATTCTCTC
TCCTTGTGCGTTAATTGTCACGGCTTTCCTCTGTGCTTCAGGGAATGGTG
AGATAAAACTTTGGGACTTGAGAGGAG GTGAGTTGGAGATCTGCCTGAAG
CCCTCCTGAGCCTTATCGAATGCTTCATAACCATTACTCTGCCATTGCAG
CTGCTAACCTTTGCTCTCAATGGCTCAGGCAAGCTATTGCACTCCTTTGA
TGCTGGCCCTGGGGTTGTGAAGGATATTCACTTTAGTCCTGTGGAGTTCC
TTCTGGCAGCTGCTACTGCG GTAGGCCCCCTGAAACGAAGCACAAGCACC
TCCGTTGAGCTTGAATACCTCTTTGCTTTTGCCTCCTTCACTGATAGCCT
AATTAATGCGCTAGCTACATGACCCGACCTTTACGCAACCTAACATGACC
TCTTCCACTCAATATGATTCTATCAACAGGACCGCTGTGTCCGTCTGTAT
GATGTCGAGAGCCTGGAGTTCTTCTGTGCCAGTCCCCCTGACAGCTCCCC
AG GTGCACCCCTGAACCCAATTGAAAGACATGAAAAGTTTCGCTCTCCTG
TCCAAAGCTGTTGACAGTCTACCTGGAACCGATTGGCCTAGACCACCTGC
CCTAGCCTCAGCTCAAGCTCAACTAAGCTCCCTCTCATCCCCGCAGTGGT
ATCCCTGGGGTTCAGTAGCAATGGGTCGGAAGTTTATGCTGCCAGCCACT
CCTCCCTTCGCTGTATCACGTGGGACAATGATACCGCTGTTGCGCAG GTA
CTCACTCGAAGGAAGTGTCACAGCCCAGCCTAGCCAAGCCAAGCAGCAGT
TTGCTCTGGCCTGGTTTAAGTCACTAGTGATAGCACCACTGCTGCTGCTG
CTCTAGCTGTCCCTGCCGAGTCACAGCACAGTGCCAAGCCAAATGGCATG
TGATAAGAACCCTACCCGAGCAGCCTAGGAGCCTTGCCTTCCTCACTAAA
GGCTTCTGTAAGGTGGAGCGGTCAGGGGAAATGTCCTGGGGAGGCGTGCA
AGCCATGCACATCACTGCTGAGAAGCAG GTAGTCAACCTGAAGGCTGAGC
TTACTGGAGTTGAACTGAACTGGCCCTTGCTGAATCCGACCAATCACAAC
TGAATGATAACTTGCTGCCTTTAATATGGCTGGAAATGATGCGTAAAGCG
CAGCATGCCATGCAACTCATTCACCCTCTTGAACCACCTCAACCTTCCCT
TCCCTTGCCTCGTGTCTCTTAGGTGGTTGCTGCTTCTTGTGCGAGCAACT
TTGTCACTGTGTGGGCAGTAGATCTAGATGATGCGGAAGAACCCCAGGCC
CTTGCGCTGCCACCCAAG GTAGGGCATTCCCACGCGCACGGAAGGATGCT
CTCGCAACCCAGCACTCACGCTCATGCATCCAAAGGTGCGCAAGCCAAGT
CGTGGGTCCTCGCGAGTGCAAGGCTCGAGCTCCAACGGCAGTGGAGGCAG
CAAAGACCATAGTGAGCAGAAAGGCACGGGCTTAGAGGTGCCAAGCTTTC
AGATCAG GTATGATGTGGCTTACTGCCCAGTGAGATGGAAGTTACTGCTT
CATCATCCTGTGATGAGTGTGCTATTGAGTGCAGCACTAACTGTACAGGA
GTTTAGTGTTTATTGAGCGATTAGCCTATTCATGACATCCCGAGATATGT
GATATGAGTGAATGCATGTAGTGGGCAGATAATGTTATTGCAGCAGCTGT
GAGAGAATTTGATGAGCCATCCTTTAGATCTGGACCATTTTTTTGCCTGC
TTACCATCATTCCTCTCAGAGGAACTCACTTGGGCAGCCCCAGATTGTCA
CCACGAGTGGCTGATGAGAAGGTGACTGCTCACCCGCGTACCTGA back to top Coding sequence (CDS) from alignment at C-australica_Contig_102:1919..5063+
>mRNA_C-australica_Contig_102.2.1 ID=mRNA_C-australica_Contig_102.2.1|Name=mRNA_C-australica_Contig_102.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1212bp|location=Sequence derived from alignment at C-australica_Contig_102:1919..5063+ (Chrysoparadoxa australica CS_1217) back to top