mRNA_C-australica_Contig_1019.5.4 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1019.5.4
Unique NamemRNA_C-australica_Contig_1019.5.4
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Match: A0A835ZF89_9STRA (Dihydroxy-acid dehydratase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF89_9STRA)

HSP 1 Score: 944 bits (2439), Expect = 0.000e+0
Identity = 468/563 (83.13%), Postives = 514/563 (91.30%), Query Frame = 3
Query:  114 MAADSDAVPNKYSSTITAPKSQGASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGAQLDIVSAFQSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSLPYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIVMALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVMEDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLTPGQEIIRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEEDMLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDASKRQLNVLVKAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTD 1802
            M +D D VPNKYSS +T  K QGASQAMLYATGL+  D++KAQVGISSVW+EGNPCNMHLLDLA KVKEGV  AGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPG +IAMGRLNRP++MVYGGTIRAG +    +LD+VSAFQSYGEY YDRITE +R +IV NSCPGPGACGGMYTANTMA AIEALG+SLPYSSS PAD D K +EC++AGEA+K +LQ DLKPRDIVTRASFENAMV VMALGGSTNAVLHLIAMA AF + +T++DFQK SDKVPFLADLKPSGKYVMEDVQ+IGGTPAVMK L++ GLIDG CMTVTGKTI+ENL DLPGLT GQEII+P + PIK+TGH+QIL+GN+A EGSVAKITGKEGLTFSGVAK YDCEEDM+A LDRKEITPGMV+VIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGH+TPEAQVGGPIALLRDGDP+VIDA K+Q+NVL+K ++L+ RR++WVAPPLKATRGTLYKYIK VASAS GCVTD
Sbjct:    1 MDSDGDVVPNKYSSILTQNKIQGASQAMLYATGLEPSDMSKAQVGISSVWFEGNPCNMHLLDLAAKVKEGVVKAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGCLIAMGRLNRPALMVYGGTIRAGCTKEYPKLDVVSAFQSYGEYQYDRITEGQRSDIVRNSCPGPGACGGMYTANTMAVAIEALGMSLPYSSSMPADTDEKLEECVKAGEAIKILLQKDLKPRDIVTRASFENAMVTVMALGGSTNAVLHLIAMARAFGVDLTIDDFQKTSDKVPFLADLKPSGKYVMEDVQQIGGTPAVMKFLMEAGLIDGSCMTVTGKTIAENLKDLPGLTEGQEIIKPLSAPIKKTGHLQILYGNVAPEGSVAKITGKEGLTFSGVAKVYDCEEDMMAGLDRKEITPGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHITPEAQVGGPIALLRDGDPIVIDAEKKQINVLLKQDQLDARRKDWVAPPLKATRGTLYKYIKNVASASVGCVTD 563          
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Match: A0A6U0VBG4_9STRA (Dihydroxy-acid dehydratase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0VBG4_9STRA)

HSP 1 Score: 894 bits (2311), Expect = 0.000e+0
Identity = 437/554 (78.88%), Postives = 500/554 (90.25%), Query Frame = 3
Query:  141 NKYSSTITAPKSQGASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGAQLDIVSAFQSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSLPYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIVMALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVMEDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLTPGQEIIRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEEDMLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDASKRQLNVLVKAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTD 1802
            NKYSSTIT PKSQGASQAML+ATGL+  D++KAQ+GISSVWYEGNPCNMHL+DLA+ VKEGV AAG+V YRFNT+GVSDGISMGT GM FSLQSRDLIADSIETVMGGQWYDAN+++PGCDKNMPGT++AMGRLNRP +MVYGGTIRAGKS++GA+LDIVSAFQSYGE VY+RITEEER +IV NSCPGPGACGGMYTANTMATAIEA+G+SLPYSSSTPA+D LK DEC RAG A+K +L+ DLKPRDI+TR +FENA+V+VMA GGSTNAVLHLIAMA +  I+VT +DFQ++SDKVPFLADLKPSG+YVMEDVQ IGGTPAVMK L+++G IDG CMTVTGKTI+ENLADLPGL+PGQ+IIRP +DPIK TGHIQIL+GN+ATEGSVAKITGKEGL FSG+AK +D E+DM+A+++RKEI  G VIV+RY+GPKGGPGMPEML PTSAIMGAGLG   ALITDGRFSGGSHGFIIGHVTPEAQVGG IALL+DGDP+VIDA  + ++V V  EEL +RR +W APPLK T+GTLYKY K VASA+ GCVTD
Sbjct:   54 NKYSSTITQPKSQGASQAMLFATGLEPPDMSKAQIGISSVWYEGNPCNMHLMDLAQAVKEGVAAAGLVPYRFNTVGVSDGISMGTPGMRFSLQSRDLIADSIETVMGGQWYDANIALPGCDKNMPGTIMAMGRLNRPGIMVYGGTIRAGKSSTGAKLDIVSAFQSYGEAVYERITEEERADIVRNSCPGPGACGGMYTANTMATAIEAMGMSLPYSSSTPAEDPLKLDECRRAGAAIKTLLEMDLKPRDIMTRQAFENAIVMVMATGGSTNAVLHLIAMAHSVGIEVTQDDFQRISDKVPFLADLKPSGQYVMEDVQGIGGTPAVMKFLMEEGFIDGSCMTVTGKTIAENLADLPGLSPGQDIIRPLSDPIKSTGHIQILYGNVATEGSVAKITGKEGLRFSGIAKVFDTEDDMIAAVERKEIGKGTVIVLRYQGPKGGPGMPEMLKPTSAIMGAGLGADTALITDGRFSGGSHGFIIGHVTPEAQVGGTIALLQDGDPIVIDAESKAIDVHVNDEELARRRSQWTAPPLKYTQGTLYKYSKLVASAARGCVTD 607          
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Match: A0A6H5K3P6_9PHAE (Dihydroxy-acid dehydratase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3P6_9PHAE)

HSP 1 Score: 893 bits (2307), Expect = 0.000e+0
Identity = 436/556 (78.42%), Postives = 504/556 (90.65%), Query Frame = 3
Query:  135 VPNKYSSTITAPKSQGASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGAQLDIVSAFQSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSLPYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIVMALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVMEDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLTPGQEIIRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEEDMLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDASKRQLNVLVKAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTD 1802
            + N++SST+T  KSQGASQAMLYATGL  ED+NKAQVG+SSVW+EGNPCNMHLLDLA++ K+GV  AGMVGYRFNTIGVSDGISMGT GMSFSLQSRD+IADSIETVMGGQWYD N+SIPGCDKNMPG +IAMGR+NRPS+MVYGGTIRAGK+ +G  LDIVSAFQ+YGE+ YDRITEE+RQ +VEN+CPGPGACGGMYTANTMA+AIEALG+SLPYSSSTPADD +K+DEC RA +AV+ ML+ DLKP+DIVTRASFENA+V VMALGGSTNAVLHLIAMA AFDI++ ++DFQ +S+KVPF+ADLKPSGKYVMED+Q +GG PAV+KML+++GL+DG CMTVTGKT++ENLA+LPGL  GQ+II+P +DPIK +GHIQIL+GN+A  G+VAKITGKEGLTFSGVAK YD EEDML SL RKEI  G V+VIRYEGPKGGPGMPEMLTP+SAIMGAGLG SVALITDGRFSGGSHGFIIGH+TPEAQ GGPIALL+D DP+VIDA KR ++VL+ + ELEKRR++WV PP  AT+GTL+KYIK VASASEGCVTD
Sbjct:   14 IMNRFSSTLTQRKSQGASQAMLYATGLTTEDMNKAQVGVSSVWFEGNPCNMHLLDLAKEAKDGVTEAGMVGYRFNTIGVSDGISMGTRGMSFSLQSRDVIADSIETVMGGQWYDGNISIPGCDKNMPGCLIAMGRVNRPSIMVYGGTIRAGKA-AGESLDIVSAFQAYGEFAYDRITEEQRQTVVENACPGPGACGGMYTANTMASAIEALGMSLPYSSSTPADDPMKKDECHRAAQAVRNMLEKDLKPKDIVTRASFENAIVTVMALGGSTNAVLHLIAMARAFDIELDIDDFQTISNKVPFVADLKPSGKYVMEDLQGVGGIPAVLKMLMEEGLLDGSCMTVTGKTMAENLAELPGLKEGQDIIKPMSDPIKPSGHIQILYGNVAPGGAVAKITGKEGLTFSGVAKVYDSEEDMLESLARKEIKAGTVVVIRYEGPKGGPGMPEMLTPSSAIMGAGLGSSVALITDGRFSGGSHGFIIGHITPEAQEGGPIALLKDDDPIVIDAEKRTISVLISSTELEKRRQDWVPPPPAATKGTLFKYIKNVASASEGCVTD 568          
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Match: A0A7S2V1Y3_9STRA (Dihydroxy-acid dehydratase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Y3_9STRA)

HSP 1 Score: 882 bits (2280), Expect = 0.000e+0
Identity = 443/591 (74.96%), Postives = 510/591 (86.29%), Query Frame = 3
Query:   48 AFLPRPAL-VGSQLRSSTASQVRMAA---DSDAVPNKYSSTITAPKSQGASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGAQLDIVSAFQSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSLPYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIVMALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVMEDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLT-PGQEIIRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEEDMLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDASKRQLNVLVKAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTDA 1805
            AF P   L  GS LR+ + S++ M A   DSD   NKYS TIT PKSQGASQAMLYATG+  +D+NK QVGI+SVWYEGNPCNMHLLDLA  VKEGV+ AGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDA +++PGCDKNMPG +IAMGRLNRP +MVYGGTIRAG + +  +LDIVSAFQSYGEY+YDRITEEER+EIVEN+CPGPGACGGMYTANTMA+AIEALG+SLP+SSS PAD DLK+ ECI AG A+K++++ ++ P+DI+TR +FENAMV++MA GGSTNAVLHLIAMA + D+ +TL+DFQKVSD+VPFLADLKPSGKYVMED+  IGG PAV+K L+++GLIDG C+T TGKTI+ENLADL  L    Q+I+ P   PIKETGHI I++GN+A EGSVAKITGKEGLTFSGVAK YD EEDML S++RKEIT GMVI+IRYEGPKGGPGMPEMLTPTSAIMGAGLG  VAL+TDGRFSGGSHGFIIGHVTPEAQVGGPIAL+ DGDP+VID  K+ ++VLV  + + KR+  W  PPLKAT+GTLYKYIKAV SASEGC+TDA
Sbjct:   21 AFTPARVLRTGSTLRTLSRSRIHMNAEGTDSDDTLNKYSKTITQPKSQGASQAMLYATGITPDDMNKPQVGIASVWYEGNPCNMHLLDLAGNVKEGVQQAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDACIALPGCDKNMPGVIIAMGRLNRPGIMVYGGTIRAGCTKNFDKLDIVSAFQSYGEYMYDRITEEERKEIVENACPGPGACGGMYTANTMASAIEALGMSLPFSSSYPADSDLKKQECIAAGAAIKELMKKNITPKDIMTRQAFENAMVVIMATGGSTNAVLHLIAMAKSVDVDLTLDDFQKVSDRVPFLADLKPSGKYVMEDLLGIGGIPAVIKYLMEEGLIDGSCITCTGKTIAENLADLDTLNFETQDIVMPLDKPIKETGHINIMYGNLAPEGSVAKITGKEGLTFSGVAKVYDSEEDMLRSMERKEITKGMVIIIRYEGPKGGPGMPEMLTPTSAIMGAGLGADVALLTDGRFSGGSHGFIIGHVTPEAQVGGPIALVEDGDPIVIDCEKKTIDVLVDDDVMAKRKAAWSPPPLKATKGTLYKYIKAVGSASEGCITDA 611          
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Match: A0A7S2WBW2_9STRA (Dihydroxy-acid dehydratase n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WBW2_9STRA)

HSP 1 Score: 860 bits (2222), Expect = 1.550e-309
Identity = 426/567 (75.13%), Postives = 492/567 (86.77%), Query Frame = 3
Query:  108 VRMAADSDAVPNKYSSTITAPKSQGASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGAQLDIVSAFQSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSLPYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIVMALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVMEDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLTPGQEIIRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEEDMLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDA--SKRQLNVLVKAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTD 1802
            +RM+A  +   NKYSS +T PKSQGASQAMLYATGLK  D+ KAQVGI+SVW+EGNPCNMHLLDLA+ VK GV+ +G+VG+ FNTIGVSDGISMGTDGMSFSLQSRD+IADS+ETVMGGQWYD  +++PGCDKNMPG +IAMGRLNRP++MVYGGTIRAGKS    QLDIVSAFQSYGE+VYDRITEEER  IV NSCPGPGACGGMYTANTMATAIEALG+SLPYSSSTPADD  K++EC RA +A+ ++L+ DLKPRDI+++ SFENA+  VMALGGSTNAVLHLIAMA A D+ +TL+DFQ++SD  PF+ADLKPSGKYVMED+ K+GGTPAV+K LL+ GL+ GDCMTVTGKT++EN+ DL  L PGQE+I P  +PIK +GH+QIL+GN+A EGSVAKITGKEG  FSGVAK YD EE ML  L+ KEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLG  VALITDGRFSGGSHGF+IGHVTPEAQVGGP+AL++DGDP+VIDA  S+R + ++V  EEL +R+  W APPL A RGTL+KYIK VASAS GCVTD
Sbjct:   13 MRMSATEEPQMNKYSSRLTQPKSQGASQAMLYATGLKEGDMKKAQVGIASVWFEGNPCNMHLLDLAKTVKGGVQDSGLVGFCFNTIGVSDGISMGTDGMSFSLQSRDIIADSVETVMGGQWYDGLIALPGCDKNMPGCLIAMGRLNRPAIMVYGGTIRAGKSPQHEQLDIVSAFQSYGEFVYDRITEEERATIVRNSCPGPGACGGMYTANTMATAIEALGMSLPYSSSTPADDPGKQEECERAAKAMYRLLELDLKPRDIMSKESFENAITTVMALGGSTNAVLHLIAMARAVDVPITLDDFQRISDATPFIADLKPSGKYVMEDIHKVGGTPAVLKYLLENGLLHGDCMTVTGKTLAENVKDLDPLAPGQEVIVPLANPIKPSGHLQILYGNMAPEGSVAKITGKEGERFSGVAKVYDKEEAMLEGLNNKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGKDVALITDGRFSGGSHGFVIGHVTPEAQVGGPLALVQDGDPIVIDARSSERTITLMVDDEELARRKAAWTAPPLPAKRGTLFKYIKNVASASLGCVTD 579          
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Match: W7TJB0_9STRA (Dihydroxy-acid dehydratase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJB0_9STRA)

HSP 1 Score: 859 bits (2219), Expect = 1.680e-308
Identity = 433/574 (75.44%), Postives = 495/574 (86.24%), Query Frame = 3
Query:   96 TASQVRMAADSDA---VPNKYSSTITAPKSQGASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGAQLDIVSAFQSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSLPYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIVMALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVMEDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLTPGQEIIRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEEDMLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDA--SKRQLNVLVKAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTD 1802
            T+ Q+ MAA ++    V NK+S TIT PKSQGASQAMLYATGL+ ED+ K QVGISSVW+EGNPCNMHLL LAE VK+GV A+GMVGYRFNTIGVSDGISMGT GMSFSLQSRD+IADSIETVM GQWYDAN+++PGCDKNMPG +IAMGRLNRPS+MVYGGTIRAG S    +LDIVSAFQ+YGEY Y+RI E ER EI+ N+CPGPGACGGMYTANTMATA EALG++LPYSSSTPADD LKR+EC RAG AV+ +L+ D+KPRDI+TRA+FENAMV VMALGGSTNAVLHLIAMA A  I ++L+DFQ  SD+VPF+ADLKPSGKYVMEDVQKIGGTPAVMK LL+KG +DG CMTVTGKT++ENL DLP L+ GQ++I P   PIK TGH+QIL+GN+A  GSVAKITGKEG  FSGVA  +D EEDMLA+L+RKEI  GMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLG  VALITDGRFSGGSHGF+IGHV+PEAQ GGPIAL++DGDP+VIDA   +R++++L+  EE+ KR+  W   P  A+RGTLYKYIK VASASEGCVTD
Sbjct:   42 TSRQLMMAAGAEGGENVLNKFSRTITQPKSQGASQAMLYATGLEPEDMAKPQVGISSVWFEGNPCNMHLLGLAEHVKKGVVASGMVGYRFNTIGVSDGISMGTSGMSFSLQSRDIIADSIETVMSGQWYDANIALPGCDKNMPGCLIAMGRLNRPSIMVYGGTIRAGCSPGHEKLDIVSAFQAYGEYQYERIDETERAEIIRNACPGPGACGGMYTANTMATAAEALGMTLPYSSSTPADDPLKREECERAGAAVRNLLEKDIKPRDIMTRAAFENAMVTVMALGGSTNAVLHLIAMARAVGIPLSLDDFQACSDRVPFIADLKPSGKYVMEDVQKIGGTPAVMKYLLEKGFLDGSCMTVTGKTMAENLKDLPSLSAGQDVILPVETPIKSTGHLQILYGNLAPGGSVAKITGKEGERFSGVAAVFDSEEDMLAALERKEIKAGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGKDVALITDGRFSGGSHGFVIGHVSPEAQEGGPIALIQDGDPIVIDAHADQRRMDLLISDEEMAKRKAAWKPRPYPASRGTLYKYIKNVASASEGCVTD 615          
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Match: L1IMD9_GUITC (Dihydroxy-acid dehydratase n=2 Tax=Guillardia theta TaxID=55529 RepID=L1IMD9_GUITC)

HSP 1 Score: 858 bits (2217), Expect = 4.530e-308
Identity = 432/559 (77.28%), Postives = 489/559 (87.48%), Query Frame = 3
Query:  141 NKYSSTITAPKSQGASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGAQ--LDIVSAFQSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSLPYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIVMALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVMEDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLTPGQEIIRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEEDMLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDA--SKRQLNVLVKAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTDA 1805
            NKYS T+T  KSQGASQAMLYATGLK ED+NKAQVGISSVWYEGNPCNMHLLDLA +VK+GVEAAGMVGYRFNTIGVSDGISMGTDGMS+SLQSRD+IADSIETV+ GQWYD N+++PGCDKNMPGT+IAM R NRPS+M+YGGTIRAG +    +  LDIVSAFQSYGE+ Y +ITEE+RQ IV+ SCPGPGACGGMYTANTMAT+IEALG+SLPYSSS PAD   K+ EC  +G+A+ K+L+ DLKPRDI+TR +FENAMV+VMA GGSTNAVLHLIAMA +  IK+T++DFQ+VSD+VP LAD+KPSGKYVMED+Q IGGTPAVMK L+DK L D   MTVTGKTI ENL  LPGLT GQ+II P   PIK+TGH+QIL+GN+A EGSVAKITGKEG TFSG A  +D EEDMLA+LDRKEI  GMV+VIRYEGPKGGPGMPEMLTPTSAIMGAGLG+ VALITDGRFSGG+HGF IGHVTPEAQVGGPIAL+R+GDP+ IDA  S R LNVLV  EE+ KR+ EW APPLKAT+GTLYKYIKAV++ASEGCVTDA
Sbjct:   66 NKYSRTLTQKKSQGASQAMLYATGLKPEDMNKAQVGISSVWYEGNPCNMHLLDLAGEVKKGVEAAGMVGYRFNTIGVSDGISMGTDGMSYSLQSRDIIADSIETVVCGQWYDGNIALPGCDKNMPGTIIAMARHNRPSIMIYGGTIRAGSAPEIDRPVLDIVSAFQSYGEFQYGKITEEQRQTIVQKSCPGPGACGGMYTANTMATSIEALGMSLPYSSSYPADSKEKKMECYNSGKAMMKLLEMDLKPRDIMTREAFENAMVMVMATGGSTNAVLHLIAMARSVGIKLTVDDFQRVSDRVPMLADMKPSGKYVMEDIQNIGGTPAVMKYLVDKNLFDDSQMTVTGKTIRENLESLPGLTDGQKIILPVEAPIKKTGHLQILYGNVAPEGSVAKITGKEGETFSGTAAVFDSEEDMLAALDRKEIKAGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGNDVALITDGRFSGGTHGFCIGHVTPEAQVGGPIALIRNGDPIQIDARSSVRTLNVLVSDEEMAKRKAEWKAPPLKATQGTLYKYIKAVSTASEGCVTDA 624          
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Match: A0A3B9D0I6_9PLAN (Dihydroxy-acid dehydratase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9D0I6_9PLAN)

HSP 1 Score: 850 bits (2197), Expect = 4.850e-306
Identity = 411/554 (74.19%), Postives = 486/554 (87.73%), Query Frame = 3
Query:  141 NKYSSTITAPKSQGASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGAQLDIVSAFQSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSLPYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIVMALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVMEDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLTPGQEIIRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEEDMLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDASKRQLNVLVKAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTD 1802
            NK+SS IT P SQGASQAMLYATGL+ +D+NK QVGISSVWYEGNPCNMHLLDLA KVKEGV+AAG++G RFNTIGVSDG+SMGT+GMSFSLQSRDLIADSIETVMGGQWYDAN+S+PGCDKNMPG V+AMGR+NRPS+MVYGGTIRAG    GA+LDIVSAFQSYG+Y+ + ITEEER  IV  SCPG GACGGMYTANTMA+AIE LG+SLPYSSS PA+D  K +EC  AG A++ +L+ D+KPRDI+TR +FENAMV+VMALGGSTNAVLHLIAMA A ++ +T++DFQ VSD++P++ADLKPSG++VMED+ +IGGTPAV+K LL+KGL+ GDCMTVTGKT+SEN+ADLPGL+ GQEII+P   PIK TGH+++L GN+ATEG++AKITGKEGL F+G A+CYD EEDML  L+ KEI  G V++IRYEGP+GGPGMPEMLTPTSAIMGAGLG  VAL+TDGRFSGGSHGFI+GH+TPEAQVGG IAL+++GD V +DA   ++NV +  EEL+ RR++W APP KATRGTLYKYIK V SASEGCVTD
Sbjct:    7 NKFSSRITQPPSQGASQAMLYATGLQPDDLNKGQVGISSVWYEGNPCNMHLLDLAAKVKEGVDAAGLLGMRFNTIGVSDGMSMGTEGMSFSLQSRDLIADSIETVMGGQWYDANISLPGCDKNMPGCVMAMGRVNRPSIMVYGGTIRAGCGLDGAKLDIVSAFQSYGQYLAESITEEERAGIVRKSCPGAGACGGMYTANTMASAIETLGMSLPYSSSIPAEDPGKLEECFAAGAAIRVLLEKDIKPRDIMTRDAFENAMVVVMALGGSTNAVLHLIAMARAVEVDLTIDDFQAVSDRIPYIADLKPSGRFVMEDLHEIGGTPAVLKYLLEKGLLKGDCMTVTGKTLSENVADLPGLSEGQEIIQPVEQPIKATGHLRVLRGNVATEGAIAKITGKEGLVFNGPARCYDSEEDMLKGLEDKEIQKGDVVIIRYEGPQGGPGMPEMLTPTSAIMGAGLGSDVALMTDGRFSGGSHGFIVGHITPEAQVGGTIALIQNGDQVTVDAESNEINVDLTDEELQSRRQQWEAPPFKATRGTLYKYIKTVKSASEGCVTD 560          
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Match: A0A7S1E8T2_HEMAN (Dihydroxy-acid dehydratase n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1E8T2_HEMAN)

HSP 1 Score: 853 bits (2205), Expect = 4.870e-306
Identity = 429/559 (76.74%), Postives = 486/559 (86.94%), Query Frame = 3
Query:  141 NKYSSTITAPKSQGASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGA--QLDIVSAFQSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSLPYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIVMALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVMEDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLTPGQEIIRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEEDMLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDASK--RQLNVLVKAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTDA 1805
            NKYS TIT  KSQGASQAMLYATGLK ED++KAQVGISSVWYEGNPCNMHLLDLA +VK+GVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMG QWYDAN+++PGCDKNMPGT+IAM R NRPS+M+YGGTIRAG +      QLDIVSAFQSYGE+ Y ++TEEER+ IV+ SCPGPGACGGMYTANTMATAIEALG+SLPYSSS+PAD   K+ EC  AG A+K +L+ DLKPRDI+TR +FEN+MV+VMA GGSTNAVLH+IAMA A  IK+T+EDFQKVSD+VPFLAD+KPSG+YVMEDVQ IGGTP +MK L++K L D    TVTGKTI++NL  LPGLT GQ+II P   PIK+TGH+QIL+GNIA EGSVAKITGKEG +FSG A  YD EEDMLA+L RKEI  GMV+VIRYEGPKGGPGMPEMLTPTSAIMGAGLGD VALITDGRFSGG+HGF IGHVTPEAQVGGPIAL++DGD + IDA+   R + V++  EE+ KR+ EW APPLKAT+GTLYKYIK+V SASEGCVTD+
Sbjct:   79 NKYSKTITQKKSQGASQAMLYATGLKPEDMDKAQVGISSVWYEGNPCNMHLLDLAGEVKKGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGAQWYDANIALPGCDKNMPGTLIAMARHNRPSMMIYGGTIRAGSAPEIGRDQLDIVSAFQSYGEFEYGKVTEEERKTIVQKSCPGPGACGGMYTANTMATAIEALGMSLPYSSSSPADSKEKKAECTSAGAAIKTLLEMDLKPRDIMTREAFENSMVMVMATGGSTNAVLHIIAMAHAAGIKLTIEDFQKVSDRVPFLADMKPSGQYVMEDVQNIGGTPGLMKYLIEKNLFDDSQKTVTGKTIAQNLEKLPGLTDGQKIILPVEAPIKKTGHLQILYGNIAPEGSVAKITGKEGESFSGTAAVYDSEEDMLAALARKEIKAGMVVVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDDVALITDGRFSGGTHGFCIGHVTPEAQVGGPIALIKDGDAIQIDATPGGRTMQVMISDEEMAKRKAEWKAPPLKATQGTLYKYIKSVVSASEGCVTDS 637          
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Match: A0A1P8WFD7_9PLAN (Dihydroxy-acid dehydratase n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WFD7_9PLAN)

HSP 1 Score: 846 bits (2185), Expect = 3.010e-304
Identity = 413/554 (74.55%), Postives = 477/554 (86.10%), Query Frame = 3
Query:  141 NKYSSTITAPKSQGASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVEAAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDANVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGAQLDIVSAFQSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSLPYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIVMALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVMEDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLTPGQEIIRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEEDMLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVALITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDASKRQLNVLVKAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTD 1802
            NKYSS IT P+SQGASQAMLYATG+  ED+NKAQVGISSVWYEGN CNMHLLDLA KVKEG+EAAG++G RFNTIGVSDGISMGT+GMS+SLQSRDLIADSIETVMGGQWYDAN+S+PGCDKNMPG +IAMGRLNRPS+MVYGGTIRAG +  G +LDIVSAFQSYG+Y+ + I ++ER+EIV  SCPG GACGGMYTANTM++AIEA+G+SLPYSSS PA+D  K  EC  AG A+K +L+ D+KPRDI+TR +FENAMV VMALGGSTNAVLHLIAMA + D+ +TL+DFQKVSD+VPF+ADLKPSG++VMED+  +GGTPAV+K LL+K  I GDCMTVTGKT+ ENLADL GL  GQEII+P   PIK TGH++IL GN+A EGSVAKITGKEGL FSG A+CYD EEDML  L+  EI  G V++IRYEGPKGGPGMPEMLTPTSAI+GAGLGD VAL+TDGRFSGGSHGFI+GH+TPEAQVGGPI LL++GD V +DA   ++NV +  E+   RR+ W APP KATRGTLYKYIK V SASEGCVTD
Sbjct:    5 NKYSSRITQPRSQGASQAMLYATGMSPEDMNKAQVGISSVWYEGNSCNMHLLDLAAKVKEGIEAAGLIGLRFNTIGVSDGISMGTEGMSYSLQSRDLIADSIETVMGGQWYDANISLPGCDKNMPGCIIAMGRLNRPSLMVYGGTIRAGCTAKGDKLDIVSAFQSYGQYLAESINDDERKEIVRKSCPGAGACGGMYTANTMSSAIEAMGMSLPYSSSIPAEDPDKLKECFNAGAAIKVLLEKDIKPRDIMTREAFENAMVTVMALGGSTNAVLHLIAMARSVDVPLTLDDFQKVSDRVPFIADLKPSGRFVMEDLHSVGGTPAVLKYLLEKNYITGDCMTVTGKTLGENLADLDGLAEGQEIIQPIEKPIKATGHLRILRGNVAPEGSVAKITGKEGLKFSGPARCYDSEEDMLKGLENNEIQKGDVVIIRYEGPKGGPGMPEMLTPTSAIIGAGLGDHVALMTDGRFSGGSHGFIVGHITPEAQVGGPIGLLQNGDIVTVDAEANEINVNLSEEDFASRRKSWTAPPYKATRGTLYKYIKTVKSASEGCVTD 558          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1019.5.4 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZF89_9STRA0.000e+083.13Dihydroxy-acid dehydratase n=1 Tax=Tribonema minus... [more]
A0A6U0VBG4_9STRA0.000e+078.88Dihydroxy-acid dehydratase n=1 Tax=Pinguiococcus p... [more]
A0A6H5K3P6_9PHAE0.000e+078.42Dihydroxy-acid dehydratase n=1 Tax=Ectocarpus sp. ... [more]
A0A7S2V1Y3_9STRA0.000e+074.96Dihydroxy-acid dehydratase n=1 Tax=Fibrocapsa japo... [more]
A0A7S2WBW2_9STRA1.550e-30975.13Dihydroxy-acid dehydratase n=2 Tax=Rhizochromulina... [more]
W7TJB0_9STRA1.680e-30875.44Dihydroxy-acid dehydratase n=2 Tax=Monodopsidaceae... [more]
L1IMD9_GUITC4.530e-30877.28Dihydroxy-acid dehydratase n=2 Tax=Guillardia thet... [more]
A0A3B9D0I6_9PLAN4.850e-30674.19Dihydroxy-acid dehydratase n=1 Tax=Planctomycetace... [more]
A0A7S1E8T2_HEMAN4.870e-30676.74Dihydroxy-acid dehydratase n=2 Tax=Hemiselmis ande... [more]
A0A1P8WFD7_9PLAN3.010e-30474.55Dihydroxy-acid dehydratase n=1 Tax=Fuerstiella mar... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1019contigC-australica_Contig_1019:11933..16575 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog55529.EKX37411
PFAMsILVD_EDD
Model size1885
Max annot lvl2759|Eukaryota
KEGG rclassRC00468,RC01714
KEGG koko:K01687
KEGG ReactionR01209,R04441,R05070
KEGG Pathwayko00290,ko00770,ko01100,ko01110,ko01130,ko01210,ko01230,map00290,map00770,map01100,map01110,map01130,map01210,map01230
KEGG ModuleM00019,M00570
Hectar predicted targeting categorymitochondrion
GOsGO:0003674,GO:0003824,GO:0004160,GO:0005488,GO:0005507,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006520,GO:0006807,GO:0006950,GO:0006970,GO:0007275,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009081,GO:0009082,GO:0009507,GO:0009532,GO:0009536,GO:0009553,GO:0009555,GO:0009570,GO:0009628,GO:0009651,GO:0009987,GO:0016053,GO:0016829,GO:0016835,GO:0016836,GO:0019752,GO:0022622,GO:0032501,GO:0032502,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0046872,GO:0046914,GO:0048229,GO:0048364,GO:0048731,GO:0048856,GO:0050896,GO:0071704,GO:0099402,GO:1901564,GO:1901566,GO:1901576
Exons20
Evalue4.04e-309
EggNOG OGsCOG0129@1|root,KOG2448@2759|Eukaryota
Ec32 ortholog descriptionDihydroxy-acid dehydratase, N-termnial part
Ec32 orthologEc-03_000220.1
EC4.2.1.9
Descriptiondihydroxy-acid dehydratase activity
Cds size1779
COG categoryEG
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586753.8014088-UTR-C-australica_Contig_1019:11932..120091682586753.8014088-UTR-C-australica_Contig_1019:11932..12009Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1019 11933..12009 -
1682586754.0123818-UTR-C-australica_Contig_1019:16546..165751682586754.0123818-UTR-C-australica_Contig_1019:16546..16575Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1019 16547..16575 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586753.8116744-CDS-C-australica_Contig_1019:12009..121351682586753.8116744-CDS-C-australica_Contig_1019:12009..12135Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 12010..12135 -
1682586753.8199987-CDS-C-australica_Contig_1019:12289..123731682586753.8199987-CDS-C-australica_Contig_1019:12289..12373Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 12290..12373 -
1682586753.8291142-CDS-C-australica_Contig_1019:12491..125461682586753.8291142-CDS-C-australica_Contig_1019:12491..12546Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 12492..12546 -
1682586753.8387446-CDS-C-australica_Contig_1019:12660..127821682586753.8387446-CDS-C-australica_Contig_1019:12660..12782Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 12661..12782 -
1682586753.8479145-CDS-C-australica_Contig_1019:12953..130291682586753.8479145-CDS-C-australica_Contig_1019:12953..13029Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 12954..13029 -
1682586753.8569958-CDS-C-australica_Contig_1019:13206..134151682586753.8569958-CDS-C-australica_Contig_1019:13206..13415Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 13207..13415 -
1682586753.866151-CDS-C-australica_Contig_1019:13710..138121682586753.866151-CDS-C-australica_Contig_1019:13710..13812Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 13711..13812 -
1682586753.8823576-CDS-C-australica_Contig_1019:13975..140261682586753.8823576-CDS-C-australica_Contig_1019:13975..14026Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 13976..14026 -
1682586753.8963654-CDS-C-australica_Contig_1019:14115..141781682586753.8963654-CDS-C-australica_Contig_1019:14115..14178Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 14116..14178 -
1682586753.9062371-CDS-C-australica_Contig_1019:14361..144461682586753.9062371-CDS-C-australica_Contig_1019:14361..14446Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 14362..14446 -
1682586753.9142818-CDS-C-australica_Contig_1019:14527..146011682586753.9142818-CDS-C-australica_Contig_1019:14527..14601Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 14528..14601 -
1682586753.923078-CDS-C-australica_Contig_1019:14797..148841682586753.923078-CDS-C-australica_Contig_1019:14797..14884Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 14798..14884 -
1682586753.9331343-CDS-C-australica_Contig_1019:15075..151591682586753.9331343-CDS-C-australica_Contig_1019:15075..15159Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 15076..15159 -
1682586753.9413185-CDS-C-australica_Contig_1019:15250..153811682586753.9413185-CDS-C-australica_Contig_1019:15250..15381Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 15251..15381 -
1682586753.950697-CDS-C-australica_Contig_1019:15506..155751682586753.950697-CDS-C-australica_Contig_1019:15506..15575Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 15507..15575 -
1682586753.9602063-CDS-C-australica_Contig_1019:15751..158301682586753.9602063-CDS-C-australica_Contig_1019:15751..15830Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 15752..15830 -
1682586753.9716525-CDS-C-australica_Contig_1019:15892..159611682586753.9716525-CDS-C-australica_Contig_1019:15892..15961Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 15893..15961 -
1682586753.982666-CDS-C-australica_Contig_1019:16042..161031682586753.982666-CDS-C-australica_Contig_1019:16042..16103Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 16043..16103 -
1682586753.993332-CDS-C-australica_Contig_1019:16165..162391682586753.993332-CDS-C-australica_Contig_1019:16165..16239Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 16166..16239 -
1682586754.003903-CDS-C-australica_Contig_1019:16468..165461682586754.003903-CDS-C-australica_Contig_1019:16468..16546Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1019 16469..16546 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1019.5.4prot_C-australica_Contig_1019.5.4Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1019 12010..16546 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1019.5.4

>prot_C-australica_Contig_1019.5.4 ID=prot_C-australica_Contig_1019.5.4|Name=mRNA_C-australica_Contig_1019.5.4|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=593bp
MLGRVSAFLPRPALVGSQLRSSTASQVRMAADSDAVPNKYSSTITAPKSQ
GASQAMLYATGLKREDINKAQVGISSVWYEGNPCNMHLLDLAEKVKEGVE
AAGMVGYRFNTIGVSDGISMGTDGMSFSLQSRDLIADSIETVMGGQWYDA
NVSIPGCDKNMPGTVIAMGRLNRPSVMVYGGTIRAGKSNSGAQLDIVSAF
QSYGEYVYDRITEEERQEIVENSCPGPGACGGMYTANTMATAIEALGLSL
PYSSSTPADDDLKRDECIRAGEAVKKMLQADLKPRDIVTRASFENAMVIV
MALGGSTNAVLHLIAMADAFDIKVTLEDFQKVSDKVPFLADLKPSGKYVM
EDVQKIGGTPAVMKMLLDKGLIDGDCMTVTGKTISENLADLPGLTPGQEI
IRPWTDPIKETGHIQILFGNIATEGSVAKITGKEGLTFSGVAKCYDCEED
MLASLDRKEITPGMVIVIRYEGPKGGPGMPEMLTPTSAIMGAGLGDSVAL
ITDGRFSGGSHGFIIGHVTPEAQVGGPIALLRDGDPVVIDASKRQLNVLV
KAEELEKRREEWVAPPLKATRGTLYKYIKAVASASEGCVTDA*
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mRNA from alignment at C-australica_Contig_1019:11933..16575-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1019.5.4 ID=mRNA_C-australica_Contig_1019.5.4|Name=mRNA_C-australica_Contig_1019.5.4|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4643bp|location=Sequence derived from alignment at C-australica_Contig_1019:11933..16575- (Chrysoparadoxa australica CS_1217)
GCGGGAGCGCCGCGATCTTTGTGGCTGCGATGCTTGGCCGTGTTTCTGCC TTCTTACCACGGCCTGCCCTGGTTGGATCCCAGCTGCGCAGCAGTACAGC CTCACAGGTGCCATTTACACATGATACATTGAAGAACCCCCTTCCAGTGG AGAACGAAGTAGAAGGGATTGCCCTCGCCTTACACCATAGATTAGTGGGT CTCAGAGATGGGGGAGGCTGGGGTGCAAGGGCTAACCGCTGCCATGAGCG CTCTGCCTGCCTTGAAGGTGCTGGTGTCTCGCCTCCTGCTTGCCCCCTGC CTTACGCTTCTTCTTCTTCTCATCCCCATTGGCCAGGTGCGCATGGCTGC TGATTCTGATGCTGTGCCTAACAAGTACAGCTCCACCATCACTGCCCCCA AGAGCCAAGGGTAAGCGGTCGCCCCTAAGCCAACTCACTGCCACTTAGCT GAAGTCACCATCGCTTTCTCAGCGCCTCACAGGCTATGCTCTATGCCACC GGACTTAAAAGGGAAGATATCAACAAAGCACAGGTTGGCCGCTAAACTAG TTCAAGCTGCCTATGCATAGGGACGAGAGAGGGTGCTGACTTGCTCTCAC CTCGCCACTTACAGGTTGGAATCAGCAGCGTTTGGTATGAGGGAAACCCC TGCAACATGCATCTGCTGGACCTGGCCGAGAAGGTGAGGTGATCACCATT GCTTGCTTCGCTGGTGATTCATTGTCTTGACCGGCATCTCCACAGGTGAA AGAAGGTGTTGAGGCAGCGGGTATGGTTGGCTACCGGTTCAACACCATAG GCGTCAGCGACGGCATCTCTATGGGTGAGAGCACAGATAGCATAGACAAC CAACCTCTTATCTGTCTCATCTGTCTCATCTGTCTTAACCGTTTTGACAC CAACCCACATGCTGGTGCTTCAACCTCGCAACCTTTGTAAAAGACAGTTT TGCTCACTCCTTGTTCCATCTGCATCCATTCCATTCCCGTCCATGTTAAG GTACCGATGGCATGTCATTCTCTCTGCAGAGCAGGGATCTCATCGCTGAC TCTATTGAGACTGTGATGGGTAAGTGCAGCCTAGTGCTGTGGCTCTGACT CGCCTACCTAGGCACCATCAATGATGATACTCTCTCCTCTCTTGCGCACT GTGTGCTCCTTTTATTTCCCTCCTTGCTCCCCTTCCTCTCATAGGAGGTC AATGGTATGACGCCAACGTCTCCATCCCTGGCTGCGATAAGAACATGCCT GGGACTGTGATTGCCATGGGGAGGCTCAACAGGCCCTCTGTTATGGTGTA CGGTGGGACCATCCGTGCTGGGAAGGTGACCTGGAGCTGCAGTTGCCTGA GCCTTGTGGGAACTCTTACCGTCTCTTGTACTGATGTGTTACTAATCGCT CTATCAACTACCCCAGAGCAACAGCGGTGCGCAACTGGACATTGTGAGTG CCTTCCAATCGTACGGAGAGTATGTGTATGACCGCATCACCGAGGAGGAG GTAATGCACTCACTCATATGAACAGGATGGAATGGAATGAGTGGAGACAC CACACCTGACTGAGTAGCACAGATAACCCAACTAGCTCACATGTCCTACT CAACCAGAGGCTATATTAGTATTACTGACCTGAGCTAGTCTAACCCACCA CATGCTGCTCTGCTCTGCATTGCCGCTCTGCTCTGCAACAGCGTCAGGAG ATAGTTGAGAACTCGTGCCCTGGCCCTGGAGCATGCGGTGGCATGTACAC TGCCAACACCATGGCCACAGCTATCGAGGTAAGGCAACAACCTTGGTAAC ATTGACGCCTGCCTGCCTTCCTTACCTCAATGACCCTTGTGCTGCTGGCC TTAAGGCACTTGTTTCTTGTCAGCAGAGTGCTACTTGCATGGTGTATTCG GTCAATAACAAGCTTGCTTGACCCTCTTCAGCTTTACCTTCGCATTGACT CATTCAGTGCATTCACCCTTCCAGGCGCTGGGGCTGAGCCTGCCGTACAG CAGCTCGACGCCAGCAGATGACGACCTGAAGCGTGATGAATGCATTAGGT GCATAGCATGACCACTCGCTCAAGACACAACTCTGCTGTCAGCCCTTGCT TCTCACCACGCCTTCCCTCTTTCCATCAGAGCTGGTGAGGCCGTCAAGAA GATGCTGCAGGCAGACCTGAAACCAAGGGACATTGTTACACGAGCTTCGT TTGAGAATGCTATGGTATGTGTTATCATGTCTCCACAGCTGAACCTGAAT TGACCCGAATTTCCAGGCTTACCTGCACCAGGCGTTGACCCTAACCCATC CCATCCTATCTGCTACTTTTGCTTGAGTTCAGCTCTTTCTCCTGGTGCAC TTGCATACCACGCCTCTGTGGCTAACCTCTATCATCTGCATGTATAGGTG ATCGTCATGGCACTTGGAGGCTCCACCAATGCTGTGCTCCATCTCATTGC CATGGCAGATGTAAGTCCCATTGTTGGAATTTGGCGCGAAGTGCTGGAAC TTACCCCCACTGACCTGCTGCTTGCACCGGTACTCACTCCACTCATAAGG CCTTTGACATCAAGGTCACTCTAGAGGACTTCCAGAAGGTGTCTGATAAG GTACTGCTGACATTTGATACATCGGTGGCCTAGGCCAGAGTGCGCCAGAC CATCCAATCTTTCAACCCAACTCCTGACTAGCAACTGCCAGCCACTTTGC CAACTTATTTGACTCACCATTTGATGAATTTCTAACAGCCACCTCTGACC ACGGTGATCTCAGGTGCCGTTTCTGGCCGACCTCAAACCCTCTGGTAAGT ATGTGATGGAGGACGTGCAGAAGATCGGAGGCACCCCTGCGGTGATGAAG ATGCTGCTTGACAAGGTACAAGGAGCGAGCTGGGAGAACAATCACAACCT GATTTGTGTTGCACCTCAAGTCAGAGCCGGTAGCCCATTCCCCAATAACT TCAATGACTTTCATGAATGATTTCCACCGATGTCACACTTGCCCCTACCC AACTAGCTCAGCATGGTGCATGTGCCCCAGAAGGACAAGCTCTTATCTCT ATTACTGAGTGCAAATCTCCTTTGGTCTTTTCCATTGCCATCCTGCTTCC CCGACCTGAATCTTTTCAACCTCCTCCTTCCCTGTCCCTTCCTGCCCAAA AACCCATTAGGGCCTCATTGATGGTGACTGCATGACTGTTACTGGGAAGA CAATCTCAGAGAACCTGGCCGATCTGCCAGGTCTTACTCCCGGGCAGGAG ATCATTAGGCCTTGGACCGACCCCATCAAGGAAACCGGCCACATCCAGAT TCTGTTTGGTAACATTGCCACAGAGGGCAGCGTGGCTAAGATTACTGGGA AGGAAGGCCTCACGTTCAGGTGAATCCCCCAGCAACCTCCCCAAAGCAAT AAAATTTGAGGTAGCTCTCACATGCTGGTAGGTTATCAGTTTTCAGCAGT GGGACTAGCTGGCTAACGCTAACTAACCCTTAGCGTTTTGCCCAGCAGCC CTCTAACTCGTTCCACTCGTGCTGCACTTTCAACTTTCCCTCTCAGTGGT GTTGCCAAGTGCTATGACTGCGAGGAGGACATGCTGGCATCACTTGACCG GAAGGAGATCACACCGGGCATGGTAAGCTTATCTCACTCCCCCCGATGAT ATCACTCACTCACTCGCTCCGGTGCTTATACTCTGTTGCTTACACTCTGC TGGTAACACCCTTTGCTAGAGAGAGTGCAGGCATTCCCCATGCCCTTGGA CCCAGTGCTCCCACTAATCCTACCTCTTTCCCCTACCTTGCAGGTGATTG TGATTCGCTACGAGGGTCCCAAGGGTGGGCCTGGCATGCCTGAAATGCTC ACTCCCACATCTGCCATCATGGGTGCTGGCTTGGGCGATTCGGTGGCTCT CATCACAGACGGAAGGTGCCGTGGTTTGAACAAACCCTGCTTTTATGATG CATTCATCCATAAAATTATCAACTCAATAAACCATTCAACCACTAAACCA TTCGACCCCTGATGTGTTGCGACCTGCAGATTCTCTGGAGGCAGCCATGG ATTCATCATTGGACATGTGACTCCAGAAGCACAGGTGATTCTAACGCCTT TAGCATATAGGCTTTTTGCCTTCTCTTAATTTTCCCAATACCTGGCTGCT TCTGCCCCTGCTGCCCTAACTATCCCCCTCATCTCTTCTATTGCACCATC AGGTGGGAGGCCCCATCGCGCTGCTCCGTGACGGTGATCCTGTTGTGATT GATGCAAGCAAAAGGCAGCTCAATGTGCTCGTCAAGGTAAATAAACTACT CGCCAGCTGTCTCTTAGCCTGCTCACGACTGTTCCCTAGACGTGCTCCCA CTCTTCCCGCCTAGTCCTGAGGGATCTATGGGGGGTTTGGGGACTCTCAC ATGCTGGGCTCCAACCGTCAACCCTCCGGCTCAATCACAGGCTGAGGAGC TAGAGAAGAGGCGTGAGGAGTGGGTGGCGCCGCCTCTTAAGGCCACCAGA GGAACCCTTTACAAGTACATCAAGGCAGTGGCAAGCGCCAGTGAGGGCTG TGTGACAGACGCATAGACATAACGAGAAGCTGGAAAGCTGCAAGAGTTGG GGTTAATCTCATTAGTCTCTTTACAATAGACAAATGAAGCAGC
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Coding sequence (CDS) from alignment at C-australica_Contig_1019:11933..16575-

>mRNA_C-australica_Contig_1019.5.4 ID=mRNA_C-australica_Contig_1019.5.4|Name=mRNA_C-australica_Contig_1019.5.4|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1779bp|location=Sequence derived from alignment at C-australica_Contig_1019:11933..16575- (Chrysoparadoxa australica CS_1217)
ATGCTTGGCCGTGTTTCTGCCTTCTTACCACGGCCTGCCCTGGTTGGATC
CCAGCTGCGCAGCAGTACAGCCTCACAGGTGCGCATGGCTGCTGATTCTG
ATGCTGTGCCTAACAAGTACAGCTCCACCATCACTGCCCCCAAGAGCCAA
GGCGCCTCACAGGCTATGCTCTATGCCACCGGACTTAAAAGGGAAGATAT
CAACAAAGCACAGGTTGGAATCAGCAGCGTTTGGTATGAGGGAAACCCCT
GCAACATGCATCTGCTGGACCTGGCCGAGAAGGTGAAAGAAGGTGTTGAG
GCAGCGGGTATGGTTGGCTACCGGTTCAACACCATAGGCGTCAGCGACGG
CATCTCTATGGGTACCGATGGCATGTCATTCTCTCTGCAGAGCAGGGATC
TCATCGCTGACTCTATTGAGACTGTGATGGGAGGTCAATGGTATGACGCC
AACGTCTCCATCCCTGGCTGCGATAAGAACATGCCTGGGACTGTGATTGC
CATGGGGAGGCTCAACAGGCCCTCTGTTATGGTGTACGGTGGGACCATCC
GTGCTGGGAAGAGCAACAGCGGTGCGCAACTGGACATTGTGAGTGCCTTC
CAATCGTACGGAGAGTATGTGTATGACCGCATCACCGAGGAGGAGCGTCA
GGAGATAGTTGAGAACTCGTGCCCTGGCCCTGGAGCATGCGGTGGCATGT
ACACTGCCAACACCATGGCCACAGCTATCGAGGCGCTGGGGCTGAGCCTG
CCGTACAGCAGCTCGACGCCAGCAGATGACGACCTGAAGCGTGATGAATG
CATTAGAGCTGGTGAGGCCGTCAAGAAGATGCTGCAGGCAGACCTGAAAC
CAAGGGACATTGTTACACGAGCTTCGTTTGAGAATGCTATGGTGATCGTC
ATGGCACTTGGAGGCTCCACCAATGCTGTGCTCCATCTCATTGCCATGGC
AGATGCCTTTGACATCAAGGTCACTCTAGAGGACTTCCAGAAGGTGTCTG
ATAAGGTGCCGTTTCTGGCCGACCTCAAACCCTCTGGTAAGTATGTGATG
GAGGACGTGCAGAAGATCGGAGGCACCCCTGCGGTGATGAAGATGCTGCT
TGACAAGGGCCTCATTGATGGTGACTGCATGACTGTTACTGGGAAGACAA
TCTCAGAGAACCTGGCCGATCTGCCAGGTCTTACTCCCGGGCAGGAGATC
ATTAGGCCTTGGACCGACCCCATCAAGGAAACCGGCCACATCCAGATTCT
GTTTGGTAACATTGCCACAGAGGGCAGCGTGGCTAAGATTACTGGGAAGG
AAGGCCTCACGTTCAGTGGTGTTGCCAAGTGCTATGACTGCGAGGAGGAC
ATGCTGGCATCACTTGACCGGAAGGAGATCACACCGGGCATGGTGATTGT
GATTCGCTACGAGGGTCCCAAGGGTGGGCCTGGCATGCCTGAAATGCTCA
CTCCCACATCTGCCATCATGGGTGCTGGCTTGGGCGATTCGGTGGCTCTC
ATCACAGACGGAAGATTCTCTGGAGGCAGCCATGGATTCATCATTGGACA
TGTGACTCCAGAAGCACAGGTGGGAGGCCCCATCGCGCTGCTCCGTGACG
GTGATCCTGTTGTGATTGATGCAAGCAAAAGGCAGCTCAATGTGCTCGTC
AAGGCTGAGGAGCTAGAGAAGAGGCGTGAGGAGTGGGTGGCGCCGCCTCT
TAAGGCCACCAGAGGAACCCTTTACAAGTACATCAAGGCAGTGGCAAGCG
CCAGTGAGGGCTGTGTGACAGACGCATAG
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