mRNA_C-australica_Contig_1018.3.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1018.3.1
Unique NamemRNA_C-australica_Contig_1018.3.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Match: D7G2H0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2H0_ECTSI)

HSP 1 Score: 293 bits (750), Expect = 2.180e-96
Identity = 142/275 (51.64%), Postives = 188/275 (68.36%), Query Frame = 1
Query:    1 WSYGPEICLCVFAVLGAVK----------------------------VKKMEKASGKEIFWAQSLVMTFLVGFGGGILAPFLLGKPPVMLVNDLIVPVVFIAWFLVARAEPLVFAIMNTPVVSQVIYVLGEVFRGNTLCGVVAAANKAIDHGKYYPIPVWGPIVLGTIAGCGGMFLPFDKGLAGIKGGAPWPLQSAFYCAFVYHLGVNDPNVTGFVSDKIGPY-SAETV---KTLVVGFLCTMTLAQSYIGEAFNPFTPVHKVIYTVSGIPDPSA 729
            W YG E+CL  FA+  + +                            V+K+EK SGK++FWA+SLVMT+++ FGGGILAPFLLGKPPVM VNDLIVP+V + WF+  RAE  +FA++NTP++ QVI VL EVFR N++CG+V  +N  +  GK+YPI +WGPI+LGT+ GCGG+FLP DKGL G+K GAPWPLQSAFY +  ++L V DPNV  ++ D    +   + V   + +V GFLC + LAQ+ I  AFNPFTPVH V+YTV+G+P+P A
Sbjct:   12 WEYGAEVCLAAFALFHSAREIKQACDALRLACAGSGALTFKQKAKILVRKIEKDSGKQMFWAESLVMTYMMAFGGGILAPFLLGKPPVMFVNDLIVPLVAVCWFVSNRAEGPIFALINTPIMKQVILVLSEVFRANSMCGIVVLSNSILKPGKHYPIALWGPILLGTVGGCGGLFLPLDKGLKGLKNGAPWPLQSAFYGSMFFNLFVYDPNVGPYLRDAAALFLDGDLVVQGRAIVAGFLCVVALAQTLISPAFNPFTPVHNVVYTVTGVPNPEA 286          
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Match: A0A835Z0I7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0I7_9STRA)

HSP 1 Score: 270 bits (691), Expect = 1.390e-87
Identity = 128/241 (53.11%), Postives = 169/241 (70.12%), Query Frame = 1
Query:    7 YGPEICLCVFAVLGAVKVKKMEKASGKEIFWAQSLVMTFLVGFGGGILAPFLLGKPPVMLVNDLIVPVVFIAWFLVARAEPLVFAIMNTPVVSQVIYVLGEVFRGNTLCGVVAAANKAIDHGKYYPIPVWGPIVLGTIAGCGGMFLPFDKGLAGIKGGAPWPLQSAFYCAFVYHLGVNDPNVTGFVSDKIGPYSAETVKTLVVGFLCTMTLAQSYIGEAFNPFTPVHKVIYTVSGIPDPSA 729
            Y PE+CL ++A++GA +VK       K ++WAQSLV+TFL+ FGGGI+APFLLGKPPV+L+NDL+V  V  +W +V R E  V A++  PV+SQ +  + EVFR N  C +V  A K I  GKYYPIP WGP++LGTIAGC GMFLPFDKGLA IKGG+PWPLQSAFY +  +HL  +DP+V   ++   G Y+A+  +  VV F   +   Q+Y G  FNPF+P+H+V Y +SG+  P A
Sbjct:   20 YMPEVCLFIYALVGAARVKS---GPAKNMYWAQSLVLTFLMCFGGGIVAPFLLGKPPVILINDLLVVAVLGSWLVVNRLEEPVGALLRAPVISQALAFMAEVFRANGFCRMVQVAFKEIPAGKYYPIPFWGPVLLGTIAGCAGMFLPFDKGLASIKGGSPWPLQSAFYGSLAFHLLAHDPHVRAALAPYAGDYTADAARACVVAFFAAVATLQTYAGPHFNPFSPLHRVAYAISGVKAPGA 257          
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Match: A0A4D9CX56_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CX56_9STRA)

HSP 1 Score: 147 bits (371), Expect = 7.450e-38
Identity = 83/242 (34.30%), Postives = 126/242 (52.07%), Query Frame = 1
Query:    1 WSYGPEICLCVFAVLGAVKVKKMEKASGKEIFWAQSLVMTFLVGFGGGILAPFLLGKPPVMLVNDLIVPVVFIAWFLVARAEPLVFAIMNTPVVSQVIYVLGEVFRGNTLCGVVAAANKAIDHGKYYPIPVWGPIVLGTIAGCGGMFLPFDKGLAGIKGGAPWPLQSAFYCAFVYHLGVNDPNVTGFVSDKIGPY---SAETVKTLVVGFLCTMTLAQSYIGEAFNPFTPVHKVIYTVSGIP 717
            + Y  E+CL  F +  +++V+   + S     W   LV+ FL GF GG + P   G+ PV+ VNDL+VP+V ++W+LV      V  ++ T     ++  L E++R  ++   V  A   I  G YYPI V GP+++GT++G  G F+P D+G++ +  G P  LQ+       YHL  +DP + G     +        E +K L V F   M       G  +NPFTPVH ++Y V GIP
Sbjct:   26 YPYEFEVCLFAFCLGASMRVRPSAQYS-----WLHHLVLVFLTGFAGGTIIPMFFGRTPVLFVNDLLVPLVCLSWYLVHYTR--VGGLLQTSPCKFLLVALFEIYRAASILKTVGQAATDIAPGPYYPIAVVGPVLVGTLSGSMGAFMPPDRGISFLATGVPLNLQTTLLACLFYHLAAHDPALPGAYLRGLPALRLSDPENLKALTVFFFVAMAFLSLVKGPDYNPFTPVHTLLYQVLGIP 260          
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Match: A0A7S2SKA8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA8_9STRA)

HSP 1 Score: 135 bits (341), Expect = 1.540e-34
Identity = 82/248 (33.06%), Postives = 127/248 (51.21%), Query Frame = 1
Query:    7 YGPEICLCVFAVLGAVKVKKMEKASGKEIFWAQSLVMTFLVGFGGGILAPFLLGKPPVMLVNDLIVPVVFIAWF-LVARAEPLVFAIM-NTPVVSQVIYVLGEVFRGNTLCGVVAAANKAIDHGKYYPIPVWGPIVLGTIAGCGGMFLPFDKGLAGIKGGAPWPLQSAFYCAFVYHLGVNDPNVTGFVSDKIGPYSAETVKTLVVGFLCTMTLA------QSYIGEAFNPFTPVHKVIYTVSGIPDPS 726
            Y  E  L  F    A K ++ E+   +  FW  SLV T +  +GGGI+ P +LG  P  + ND  + +V  +W+ L     PLV  ++ N+ V+   ++ + E  R N +      AN  +    +YPIP+WGPI+ G I+GC G F+    GL  ++    W +QS+FY A  YH+ VNDP + G +  K+    A +   LV    C   L       +++ G  FNPF PVH ++Y ++G  +P+
Sbjct:   69 YSLEFLLWGFTTWMAYKFRRQERVQAERYFWLNSLVRTAIACYGGGIIVPMMLGMKPFPIENDAAITLVLFSWWTLHGTPAPLVTWVLDNSTVLRCFLFFIFEALRCNVVVKWCIIANSMLAPSVHYPIPIWGPILCGGISGCFGGFILGGVGL--VQSEVSWLIQSSFYAAAYYHITVNDP-IVGPILGKLHISGAGS-DPLVARMTCIFALGAVAVLQEAFFGAHFNPFAPVHHLLYKITGAHNPA 312          
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Match: A0A7R9U3G1_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U3G1_9STRA)

HSP 1 Score: 128 bits (322), Expect = 5.540e-32
Identity = 76/223 (34.08%), Postives = 111/223 (49.78%), Query Frame = 1
Query:   19 ICLCVFAVLGAVKVKKMEKASGKEIFWAQSLVMTFLVGFGGGILAPFLLGKPPVMLVNDLIVPVVFIAWFLVARAEPLVFAIMNTPVVSQVIYVLGEVFRGNTLCGVVAAANKAIDHGKYYPIPVWGPIVLGTIAGCGGMFLPFDKGLAGIKGGAPWPLQSAFYCAFVYHLGVNDPNVTGFVSDKI----GPYSAETVKTLVVGFLCTMTLAQSYIGEAFNPF 675
            +C   F  +GA    K +  S     W +SL+ TFL  FGGG L P +LGKPPV L +D++  +  +AW L     P+   +     +   + + G +F+    C  V  A K +     YPIP+ GPIVLG +   GGMFLPFDKGLA +  G     +    C+  +H+ VND +  GF+   +    GP + ET     VG+     L +  +  +F+PF
Sbjct:   38 LCAFCFIFMGARAAAKAKSGS-----WVESLIRTFLTAFGGGTLVPLILGKPPVFLDSDVLFCMTLLAWAL-THLTPVGRWVEYNQALRLPLNLGGYIFKAVKCCSTVNTAAKVLSASALYPIPLMGPIVLGVLGSTGGMFLPFDKGLAAVSKGLSVAFEIPLACSAFFHIIVNDQS--GFLGTTLRQLTGPVTNETAVLAAVGWFAGTYLTKELLDSSFDPF 252          
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Match: A0A6H5JUV5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV5_9PHAE)

HSP 1 Score: 130 bits (327), Expect = 8.450e-32
Identity = 79/246 (32.11%), Postives = 124/246 (50.41%), Query Frame = 1
Query:    1 WSYGPEICLCVFAVLGAVKVKKMEKASGKEIFWAQSLVMTFLVGFGGGILAPFLLGKPPVMLVNDLIVPVVFIAWFLVARAEPLVFAIMNTPVVSQVIYVLGEVFRGNTLCGVVAAANKAIDHGKYYPIPVWGPIVLGTIAGCGGMFLPFDKGLAGIKGGAPWPLQSAFYCAFVYHLGVNDPNVTG-FVSDKIGPYSA--ETVKTLVVGFLCTMTLAQSYIGEAFNPFTPVHKV----IYTVSGIP 717
            W Y  E  L  F+++ +  VK   K++  E       V T +   G G++ P L+  PP+ L NDL+V  + + + +    +P V   + TP + + + +L    R N +C +V  A        YYPI ++GPI++G   G GG  +P DKGL+ I    PW +Q  F  A  YH+  ND  + G  V   +G  +A  E ++ + V F   +T+ Q+Y    FNPFTP H+     +Y V+G+P
Sbjct:   17 WPYSSEFYL--FSLVTSACVKARGKSTKFEGLLLPMFVHTLMCTTGSGVVGPLLMRDPPLFLNNDLLVTCIMVFFLVSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHIVANDTYILGGMVRGALGLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQATSPALYAVTGMP 260          
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Match: D7FML9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FML9_ECTSI)

HSP 1 Score: 118 bits (296), Expect = 2.000e-27
Identity = 65/185 (35.14%), Postives = 99/185 (53.51%), Query Frame = 1
Query:  172 PPVMLVNDLIVPVVFIAWFLVARAEPLVFAIMNTPVVSQVIYVLGEVFRGNTLCGVVAAANKAIDHGKYYPIPVWGPIVLGTIAGCGGMFLPFDKGLAGIKGGAPWPLQSAFYCAFVYHLGVNDPNVTG-FVSDKIGPYSA--ETVKTLVVGFLCTMTLAQSYIGEAFNPFTPVHKVIYTVSGIP 717
            PP+ L NDL+V  + + +      +P V   + TP + + + +L    R N +C +V  A        YYPI ++GPI++G   G GG  +P DKGL+ I    PW +Q  F  A  YH+  ND  + G  V   +G  +A  E ++ + V F   +T+ Q+Y    FNPFTP H+ +YTV+G+P
Sbjct:    4 PPLFLNNDLLVTCIMVFFLFSVVFDPYVVNFIKTPHLWKAMALLSTTSRMNKICFIVDYALTKFPPSPYYPIALFGPIMIGLARGIGGSLVPADKGLSSISKDLPWAVQLCFSVATFYHVVANDTYILGGMVRGALGLENATREDIRLIAVTFGVVVTVIQTYYAPKFNPFTPAHQALYTVTGMP 188          
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Match: A0A7S1RES9_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1RES9_ALECA)

HSP 1 Score: 100 bits (248), Expect = 3.550e-21
Identity = 57/170 (33.53%), Postives = 89/170 (52.35%), Query Frame = 1
Query:   52 VKVKKMEKASGKEIFWAQSLVMTFLVGFGGGILAPFLLGKPPVMLVNDLIVPVVFIAWFLVARAEPLVFA----IMNTPVVSQVIYVLGEVFRGNTLCGVVAAANKAIDH------GKYYPIPVWGPIVLGTIAGCGGMFLPFDKGLAGIKGGAPWPLQSAFYCAFVYHL 531
            +KV +  +      FW ++LV T +  FGGG LAP ++   PV L  +     +  AW+ V    P+V      I  +     V+ +L  +F+   + G +  A KA+DH       +Y+ +P+ GP+V G + GCGG FLPFDKGL  I+ G  WP+ +AF+   +Y+ 
Sbjct:   94 LKVAQDVREQVVNFFWPKALVTTAIAAFGGGFLAPLIVAHCPVPLREETFFWFLVFAWY-VTHHVPVVSVTWCEIAKSKAGWTVLTILFGIFKTQQIVGSIELAAKAVDHEPLMPHSRYFFVPMAGPLVCGFLGGCGGAFLPFDKGLRPIEEGKQWPVSAAFFATVIYYF 262          
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Match: A0A7S1VWR2_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1VWR2_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.970e-20
Identity = 64/171 (37.43%), Postives = 89/171 (52.05%), Query Frame = 1
Query:   64 KMEKASGKEIFWAQSLVMTFLVGFGGGILAPFLLGKPPVMLVNDLIVPVVFIAWFLVARAEPLVFAIMN-TPVVSQVIYVLGEVFRGNTLCGVVAAANKAIDHGKYYPIPVWGPIVLGTIAGCGGMFLPFDKGLAGIKGGAPWPLQSAFYCAFVYHLGVNDPNVTGFVSDK 573
            K+ KA  K    +  L+   L   GGGIL P  L K PV L ND   P+  +  F +    P+V  +MN +PVV  ++ V  E+ R   +     AA+ AI     +  P++GPI+ GT+AGCGG FLP +KGL  I  G   P+ SAF  A + HL +N     G ++ K
Sbjct:   49 KVFKAVPKTASVSYKLISMILACTGGGILVPIFLNKVPVPLANDAY-PIAILTSFAIHYYFPVVAEVMNLSPVVKSLVVVFYELIRAKVVLTFTLAASAAIAP-TTFSFPLFGPIMCGTVAGCGGAFLPMNKGLDPITSGLQPPMSSAFVGATLVHLFLNTSLSDGVINAK 217          
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Match: A0A6T1L8M4_9DINO (Hypothetical protein n=4 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A6T1L8M4_9DINO)

HSP 1 Score: 97.1 bits (240), Expect = 2.900e-20
Identity = 59/181 (32.60%), Postives = 94/181 (51.93%), Query Frame = 1
Query:   16 EICLCVFAVLGAVKVKKMEKASGKEIFWAQSLVMTFLVGFGGGILAPFLLGKPPVMLVNDLIVPVVFIAWFLVARAEPLVFA---IMNTPVVSQVIYVLGEVFRGNTLCGVVAAANKAIDH------GKYYPIPVWGPIVLGTIAGCGGMFLPFDKGLAGIKGGAPWPLQSAFYCAFVYHL 531
            E+ +  F +  A  V+  E+ +G  +FW ++LV T +  FGGG LAP ++   PV L  +    ++ +AW++      L  A   I        V+ VL  +F+   + G +  A KA+DH       +Y+ +P   P++ G + GCGG FLPFDKGL  I  G  WP+ +AF+   +Y+ 
Sbjct:   54 EVTVAGFMLKVAQDVR--EQVAG--LFWPKALVTTGIAAFGGGFLAPLVVAHCPVPLREETFFWILVVAWYVTHHVPYLSAAWCEIATAKPGKTVLTVLFCIFKTQQIVGSIELAAKAVDHEPLMPHSRYFFVPCAAPLLCGFLGGCGGAFLPFDKGLRPISEGKAWPVSAAFFTTAIYYF 230          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1018.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G2H0_ECTSI2.180e-9651.64Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z0I7_9STRA1.390e-8753.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A4D9CX56_9STRA7.450e-3834.30Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A7S2SKA8_9STRA1.540e-3433.06Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7R9U3G1_9STRA5.540e-3234.08Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A6H5JUV5_9PHAE8.450e-3232.11Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FML9_ECTSI2.000e-2735.14Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S1RES9_ALECA3.550e-2133.53Hypothetical protein n=1 Tax=Alexandrium catenella... [more]
A0A7S1VWR2_9STRA1.970e-2037.43Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A6T1L8M4_9DINO2.900e-2032.60Hypothetical protein n=4 Tax=Alexandrium monilatum... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1018contigC-australica_Contig_1018:6498..8030 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7G2H0
PFAMsTRIC
Model size762
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons9
Evalue3.58e-97
EggNOG OGs2BW3U@1|root,2SEWS@2759|Eukaryota
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-00_005940.1
Cds size762
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1018.3.1prot_C-australica_Contig_1018.3.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1018 6498..8030 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586752.7584264-CDS-C-australica_Contig_1018:6497..65541682586752.7584264-CDS-C-australica_Contig_1018:6497..6554Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1018 6498..6554 +
1682586752.7703202-CDS-C-australica_Contig_1018:6644..66921682586752.7703202-CDS-C-australica_Contig_1018:6644..6692Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1018 6645..6692 +
1682586752.7797294-CDS-C-australica_Contig_1018:6772..68771682586752.7797294-CDS-C-australica_Contig_1018:6772..6877Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1018 6773..6877 +
1682586752.7917554-CDS-C-australica_Contig_1018:6982..70491682586752.7917554-CDS-C-australica_Contig_1018:6982..7049Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1018 6983..7049 +
1682586752.8017774-CDS-C-australica_Contig_1018:7131..72741682586752.8017774-CDS-C-australica_Contig_1018:7131..7274Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1018 7132..7274 +
1682586752.810327-CDS-C-australica_Contig_1018:7356..75021682586752.810327-CDS-C-australica_Contig_1018:7356..7502Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1018 7357..7502 +
1682586752.8190758-CDS-C-australica_Contig_1018:7626..76691682586752.8190758-CDS-C-australica_Contig_1018:7626..7669Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1018 7627..7669 +
1682586752.8275962-CDS-C-australica_Contig_1018:7807..79071682586752.8275962-CDS-C-australica_Contig_1018:7807..7907Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1018 7808..7907 +
1682586752.8360043-CDS-C-australica_Contig_1018:7977..80301682586752.8360043-CDS-C-australica_Contig_1018:7977..8030Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1018 7978..8030 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1018.3.1

>prot_C-australica_Contig_1018.3.1 ID=prot_C-australica_Contig_1018.3.1|Name=mRNA_C-australica_Contig_1018.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=254bp
WSYGPEICLCVFAVLGAVKVKKMEKASGKEIFWAQSLVMTFLVGFGGGIL
APFLLGKPPVMLVNDLIVPVVFIAWFLVARAEPLVFAIMNTPVVSQVIYV
LGEVFRGNTLCGVVAAANKAIDHGKYYPIPVWGPIVLGTIAGCGGMFLPF
DKGLAGIKGGAPWPLQSAFYCAFVYHLGVNDPNVTGFVSDKIGPYSAETV
KTLVVGFLCTMTLAQSYIGEAFNPFTPVHKVIYTVSGIPDPSAPPAKKES
KTD*
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mRNA from alignment at C-australica_Contig_1018:6498..8030+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1018.3.1 ID=mRNA_C-australica_Contig_1018.3.1|Name=mRNA_C-australica_Contig_1018.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1533bp|location=Sequence derived from alignment at C-australica_Contig_1018:6498..8030+ (Chrysoparadoxa australica CS_1217)
TGGTCTTACGGCCCGGAGATCTGCCTTTGCGTGTTTGCAGTGCTGGGAGC TGTCAAGGTACGCACAAGATGAGCGCTTGTTTGGGGGTTGCGAAGCGGGG TTCCTTCATCTGTTGCCACCCTTTTAGCCCCTCATCTCCCAACACAGGTC AAGAAGATGGAGAAGGCGTCAGGCAAGGAAATTTTTTGGGCTCAGGTTTG TCTGATCGGAGCTGGCCTGTGTGCGCTGCGTTGTGCTAATCTTTCTCTCT CTCTCTCTACAACCCTCCATGCCAGAGCCTGGTCATGACCTTCCTGGTGG GATTTGGCGGTGGCATCCTTGCCCCATTCCTATTGGGCAAGCCTCCTGTA ATGCTAGTGAATGACCTGATAGTACCCGTGGTACGTGCACATCAATCGCT CTCTTACCTAGGAAGGCTAGAATAGTAGTGGGTATGAATGAAACATAGAG AAGAGTGTTTATTTGCAGTTGTCTATCTTTAACAGGTTTTCATTGCTTGG TTCCTGGTAGCTCGTGCAGAACCCCTGGTCTTTGCCATTATGAACACGCC AGGTAGGAATGGGAAGAGAGCATAACCCCCTGCTTGGTTTTGTTTTTTGT TTTCATCAGCTCACTCACTTGGCTTCCCTTGCAGTTGTGAGCCAAGTCAT CTATGTGCTCGGCGAGGTGTTCCGTGGCAACACATTGTGCGGGGTAGTGG CTGCAGCCAACAAGGCCATTGACCACGGCAAATACTACCCCATTCCAGTC TGGGGACCTATCGTTCTCGGCACTATTGTGAGTCTGCTGCCTAGGGCTTG AGTGTTCTCATATCTGACCTGACTTTGCTGGCAATGTGCCATGCTGCACA ACTGAGCAGGCTGGATGCGGAGGTATGTTCCTCCCCTTTGACAAGGGACT AGCTGGCATTAAAGGAGGTGCTCCCTGGCCACTTCAGAGTGCGTTCTACT GCGCATTCGTGTACCACCTGGGTGTCAACGACCCCAACGTCACTGGGTTT GTCAGGTGCTGTTGGAGAACTATCTGTCCCTGCCATCCAGCCGACCTCAC CAATACTAGCACCAACACCAGCTTGCATCTGCTTCTGCTGCTGCTGCTGC TATTTAATGCTGCTGATGTGCTTTTACAGCGACAAGATCGGTCCGTACAG TGCGGAGACAGTTAAGACCCTGGTGAGTGAGTGAGTGATTGCCTGGTCTG CTCAGGTTTGGCTTGGTTTGGTTTGGTTTGGTTTGATCATTTTGAGGACT GGGCTGGGTTATCTTGCCCCCATAGCACTTCACCCCTCACCCACGTCCTT CCCTCACAAGGTGGTTGGCTTTCTCTGCACCATGACGCTCGCTCAGTCAT ACATTGGTGAAGCATTCAACCCCTTTACACCTGTGCACAAAGTCATCTAC ACCGTCTCAGGTACTCTATCCTCCATCACCCACCCCATGGTGTGCATAGC TCACAATGGCTCAAAACGGCACCACCACAGGCATACCAGACCCTAGTGCA CCTCCTGCCAAGAAAGAGAGCAAGACCGATTAA
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Coding sequence (CDS) from alignment at C-australica_Contig_1018:6498..8030+

>mRNA_C-australica_Contig_1018.3.1 ID=mRNA_C-australica_Contig_1018.3.1|Name=mRNA_C-australica_Contig_1018.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=762bp|location=Sequence derived from alignment at C-australica_Contig_1018:6498..8030+ (Chrysoparadoxa australica CS_1217)
TGGTCTTACGGCCCGGAGATCTGCCTTTGCGTGTTTGCAGTGCTGGGAGC
TGTCAAGGTCAAGAAGATGGAGAAGGCGTCAGGCAAGGAAATTTTTTGGG
CTCAGAGCCTGGTCATGACCTTCCTGGTGGGATTTGGCGGTGGCATCCTT
GCCCCATTCCTATTGGGCAAGCCTCCTGTAATGCTAGTGAATGACCTGAT
AGTACCCGTGGTTTTCATTGCTTGGTTCCTGGTAGCTCGTGCAGAACCCC
TGGTCTTTGCCATTATGAACACGCCAGTTGTGAGCCAAGTCATCTATGTG
CTCGGCGAGGTGTTCCGTGGCAACACATTGTGCGGGGTAGTGGCTGCAGC
CAACAAGGCCATTGACCACGGCAAATACTACCCCATTCCAGTCTGGGGAC
CTATCGTTCTCGGCACTATTGCTGGATGCGGAGGTATGTTCCTCCCCTTT
GACAAGGGACTAGCTGGCATTAAAGGAGGTGCTCCCTGGCCACTTCAGAG
TGCGTTCTACTGCGCATTCGTGTACCACCTGGGTGTCAACGACCCCAACG
TCACTGGGTTTGTCAGCGACAAGATCGGTCCGTACAGTGCGGAGACAGTT
AAGACCCTGGTGGTTGGCTTTCTCTGCACCATGACGCTCGCTCAGTCATA
CATTGGTGAAGCATTCAACCCCTTTACACCTGTGCACAAAGTCATCTACA
CCGTCTCAGGCATACCAGACCCTAGTGCACCTCCTGCCAAGAAAGAGAGC
AAGACCGATTAA
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