mRNA_C-australica_Contig_1017.1.2 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1017.1.2
Unique NamemRNA_C-australica_Contig_1017.1.2
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Match: A0A7S2G0F4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G0F4_9STRA)

HSP 1 Score: 322 bits (826), Expect = 3.910e-96
Identity = 218/498 (43.78%), Postives = 288/498 (57.83%), Query Frame = 1
Query:  349 KARDFSLMLDSQGRQVDAEGNVVKTQASAVASLKVNKQSMEQRKKNNPYLAHRKVGAEMDE------DPADWVDGRLGPGRSWEAKGKKGLKFVEVGTFVKEGEVMRMREERRVQHGDGLGGRKNIEKVVEFA---------------------SAKKEEKPAGELPKPHDWRAAIPVMEWWDEAFLEKGLRESKADGSLAPEKATTEALYAAAKLQHCRFYKYVQHPVATRGAGEKAQAEVAMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKILGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLKRDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVIICPA----ANCELVVVEGGPGSIKKYIRLMLHRIKWVEEDFGEDQDSDXXXXXXXXXXXXXXXXXGNSGMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWDQV 1749
            KA+DF+L LD  GR VDA GNV+K Q + V +LK N   +    K NPYL +  V   +DE      + A+ VD R+   RS   + KK  +F + G FVK+G+ MR++E  ++  G   G   N  K   FA                     +A   EKP   LP+     A  P +EWWD  +L +  R   A+G+     A+ +A      +   +F+K V HP   +  G KA+ E ++PV+LTK+ERKRIRRQAR E+QRE+QDKIALGLM P EPK+KL+NFMK+LGDQA+ADPSK+E  V +QV+AR + H  RNQ RKLTP E++EK   KL  D + +   ALFR+    M D + +FKVDMNA+Q  LTGGV+ C       N  LVV+EGGP ++K+Y RLMLHRIKW  ++F ED           XXXXX          C+LVW G  +RR F  F+FQ+C +A  ARK++  KGV H WD V
Sbjct:  172 KAQDFTLRLDEMGRAVDASGNVIK-QNAPVRTLKANVSQV----KVNPYLDYSGVAKPLDEGDAAEAEGANQVDPRIKT-RSRHDRAKKTFQFHKQGVFVKQGDAMRVKETSKLLSGLTSGRNSNAYKKEGFAGESALEIEQNNGGVTSNGDHDAASSTEKPDA-LPEAPGMDAPPPNVEWWDVPYLPQEKRS--ANGA-----ASRDATPLDCAISQSKFHKLVLHPTPVKPLGGKAK-EPSVPVYLTKKERKRIRRQAREERQREQQDKIALGLMAPPEPKLKLANFMKVLGDQAVADPSKIERKVMEQVQARVMNHEMRNQARKLTPAERKEKKRKKLAEDTSLQVTVALFRVLD--MSDKQLQFKVDMNAQQNNLTGGVLQCKGDAGDVNISLVVIEGGPKAVKRYTRLMLHRIKWSGDEFDEDX----------XXXXXAMTSKRKQNRCDLVWIGTAVRRNFNAFRFQDCKSAAAARKVMESKGVAHLWDMV 642          
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Match: K3W6M6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6M6_GLOUD)

HSP 1 Score: 298 bits (762), Expect = 4.870e-87
Identity = 215/496 (43.35%), Postives = 287/496 (57.86%), Query Frame = 1
Query:  367 LMLDSQGRQVDAEGNVVKTQASA-VASLKVNKQS---------MEQRKKN-NPYLAHRKVGAEMDEDPADWVDGRLGPGRSWEAKGKKGLKFVEVGTFVKEGEVMRMREERRVQHGDGLGG------RKNIEKVVEFASAKK--EEKPAGELPK-------PHDWRAAIPVMEWWDEAFLEKGLRESKADGSLAPEKATTE-----ALYAAAKLQHCRFYKYVQHPVATRGAGEKAQAEVAMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKILGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLKRDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVIICPAANCELVVVEGGPGSIKKYIRLMLHRIKWVEEDFGEDQDSDXXXXXXXXXXXXXXXXXGNSGMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWDQVANHT 1761
            L+LD QGRQ+DA GNV+     A VA+LK N+ S          +Q+++N NPYL+HR V  E   D  D VD RL   +  E +G K  +FV  GT++K+GE +R RE +++  G   G       +++I  V E A A        A  +P        P    +  P +EWWD  +L K  R +     L   K+  E       Y   K+++C     ++HP       +K +  V +P+ LT  ERK+IRRQ R ++++EKQDKIALGL+ P EPK+KLSN M++L DQA+ADPS +E  V +QV  RE  H  RN  RKLTP E+REK   K+K D A +   A+F++    + + + RFKVD+NA+Q  LTGGV+IC   N  +VVVEGG  +IK Y RL+  RI+W+     E  DS   XXXXXXXXXXX    GN   C+LVWQGVV R+ FT F+FQEC TA TARK++  KGV HYWD V   T
Sbjct:  156 LLLDEQGRQIDAAGNVIADPLPAPVATLKANQSSGTTAARSSSTQQKQQNANPYLSHRTVDKE---DAVDAVDPRLTI-KKRETRGAKSFQFVTHGTYIKQGEQVRAREAKKMLAGFTSGRNPRGYQKESIVPVDEAADAGAGATSTDAAAVPMELYDVDVPVKPESQTPDVEWWDIEYLPKDKRVNVDKFGLIKAKSRKENPEITVTYTEMKIKYCGTMHVIEHPARVASIVKKDEGPVVLPLMLTAAERKKIRRQNRADREKEKQDKIALGLLPPPEPKVKLSNMMRVLADQAVADPSAIERKVRQQVAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFKVPD--LSNPQHRFKVDVNAQQFHLTGGVLICKEDNLNMVVVEGGKKAIKHYTRLLTKRIQWLASS--EHGDS---XXXXXXXXXXXAESKGNG--CKLVWQGVVARKAFTTFRFQECRTAATARKVMEAKGVVHYWDLVEKST 638          
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Match: A0A421H1J6_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421H1J6_9STRA)

HSP 1 Score: 296 bits (757), Expect = 1.870e-86
Identity = 202/488 (41.39%), Postives = 272/488 (55.74%), Query Frame = 1
Query:  367 LMLDSQGRQVDAEGNVV--KTQASAVASLKVN----KQSMEQRKKN-NPYLAHRKVGAEMDEDPADWVDGRLGPGRSWEAKGKKGLKFVEVGTFVKEGEVMRMREERRVQHGDGLGGRK---------NIEKVVEFASAKKEEKPAGEL------PKPHDWRAAIPVMEWWDEAFLEKGLRESKADGSLAPEKATTE-----ALYAAAKLQHCRFYKYVQHPVATRGAGEKAQAEVAMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKILGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLKRDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVIICPAANCELVVVEGGPGSIKKYIRLMLHRIKWVEEDFGEDQDSDXXXXXXXXXXXXXXXXXGNSGMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWDQV 1749
            L+LD QGR++DA GNVV  K   + VA+LK N    K+S E  + N NPYL+HR V    +ED  + VD RL   +  E + +K   FV  GT+VK+GE +R R+ +++  G   G            N+++  E    K+E+    E+      PKP     A P +EWWD  +L K  R           K   E       YA  KL++C     V+HP       ++  A V++P+ LT  ERK+IRRQ R ++++EKQDKIALGL+ P EPK+KLSN M++L +QA+ADPS +E  V +Q+  RE  H  RN  RKLTP E+REK   K+K+D A +   ALF++    + + + RFKVD+NA+Q  LTGGV+IC  +N  +VVVEGG  +IK Y +LML RI W      E QDSD                   S  C LVWQGVV R+ F  F+FQEC    TARK++  K V HYWD V
Sbjct:  149 LLLDEQGREIDAAGNVVVEKPTVAPVATLKANQGGAKRSAEGNRSNQNPYLSHRTVD---EEDKLEAVDPRLKVTKR-ETRARKTFNFVAQGTYVKQGEQVRARDAKKMMAGFTSGRNPRGYQKESIANVDESAEPTPEKEEKTSQMEIDNVEVPPKPE---MATPDVEWWDVEYLRKEKRGMVDKFGFIKAKIRNENPGVAIAYADMKLKYCGTVHVVEHPARLNLIVKRDDAPVSVPLMLTAAERKKIRRQNRADREKEKQDKIALGLLPPPEPKVKLSNMMRVLSEQAVADPSAIERKVREQMAQREKNHEMRNLARKLTPEERREKKLRKIKQDAAGDIHVALFKVPD--LSNPQHRFKVDVNAQQYHLTGGVLICKDSNINMVVVEGGKKAIKHYTKLMLRRIDWQGTREAE-QDSDSEGEDASQ----------RSNGCLLVWQGVVARKAFNNFRFQECRNTTTARKVMEAKNVVHYWDLV 616          
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Match: A0A8K1CCE6_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCE6_PYTOL)

HSP 1 Score: 295 bits (755), Expect = 2.380e-86
Identity = 207/484 (42.77%), Postives = 273/484 (56.40%), Query Frame = 1
Query:  367 LMLDSQGRQVDAEGNVVKTQASA-VASLKVNKQSMEQRKKN-NPYLAHRKVGAEMDEDPADWVDGRLGPGRSWEAKGKKGLKFVEVGTFVKEGEVMRMREERRVQHG-----DGLGGRKNI-----EKVVEFASAKKEEKPAG----ELPKPHDWRAAIPVMEWWDEAFLEKGLRES-------KADGSLAPEKATTEALYAAAKLQHCRFYKYVQHPVATRGAGEKAQAEVAMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKILGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLKRDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVIICPAANCELVVVEGGPGSIKKYIRLMLHRIKWVEEDFGEDQDSDXXXXXXXXXXXXXXXXXGNSGMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWDQV 1749
            L+LD QGRQ+D  GNVV  +  A VA+L+ NK      K N NPYL+HR V  E   D  D VD RL   R  EA+  K   FV+ GT+VK+ E +R RE +++  G     +  G +K       E         K E P      ++  P       P +EWWD  +L K  + +       K        + T E  YA  K + C     ++HP     A ++    VA+P+ LT  ERK+IRRQ R E+++EKQDKIA+GLM P EPK+KLSN MK+LG+QA+ADPS +E  V +Q+  RE  H  RN  RKLTP E+REK   K+K D A +   A+FR+    + + + RFKVD+NA+Q  LTGGV+IC   N  +++VEGG  +IK Y RL+  RI+W +   G+D          XXXXXXXXX   N+  C LVWQG+V RR F  F+FQEC TA TARK++  K V HYWD V
Sbjct:  138 LLLDEQGRQIDENGNVVAARVPAPVATLRANKSGASAAKSNQNPYLSHRTVDKE---DRVDAVDPRLKAKRR-EARAAKSFSFVQQGTYVKQAENLRAREAKKMLAGFTSGRNPRGYQKEAIVPIDEDTANGLDGAKTETPESMEVFDVDVPIRPEPNTPDVEWWDIEYLPKDKKAAVDKFGFIKVQARKDNPEITIE--YAEMKAKFCGTLHVIEHPARLNPAFKQDTEPVAIPLMLTAAERKKIRRQNRAEREKEKQDKIAIGLMPPPEPKVKLSNMMKVLGEQAVADPSAIERKVRQQMAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFRVPD--LANPQHRFKVDVNAQQYHLTGGVLICKEDNINVIIVEGGRKAIKHYTRLLTKRIRWNDNGTGDDA---------XXXXXXXXXNAENTSGCVLVWQGIVARRAFNNFRFQECRTATTARKVMETKNVVHYWDLV 604          
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Match: A0A485LNQ5_9STRA (Aste57867_23179 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LNQ5_9STRA)

HSP 1 Score: 292 bits (748), Expect = 1.680e-85
Identity = 203/493 (41.18%), Postives = 270/493 (54.77%), Query Frame = 1
Query:  367 LMLDSQGRQVDAEGNVVKTQASAVASLKVNKQ----SMEQRKKNNPYLAHRKVGAEMDEDPADWVDGRLGPGRSWEAKGKKGLKFVEVGTFVKEGEVMRMREERRVQHGDGLGGRKNIEKVVEFASAKKEEKPAG--------ELPKPHDWRAAIPVMEWWDEAFLEKGLRES-KADGSLAPEKATTEALYAA-AKLQHCRFYKYVQHPVATRGAGEKAQAEVAMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKILGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLKRDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVI-ICPAANCELVVVEGGPGSIKKYIRLMLHRIKWV-----EEDFGEDQDSDXXXXXXXXXXXXXXXXXGNSGMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWDQVANHTPGA*ELDE 1785
            L+LD QGR +DA GNV+    + VA+LK N        E  K+ NPYL+ R +  E   D  DW+D RL   +  E +G K   FV+ GTFVK+GE MR RE +++  G   G   N       A   + +  A         E+P   D    +P +EWWD  FL K  +E    +G L     T    Y    +L+H      ++HP   +    + +  V +P+ LTK ERKRIRR  R E+ +E QDK+ALGL+ P EPK+KL+N M++L DQA+ADPS VE  V  QV  RE  H  RN  RKLTP EKREK   KLK+D A +   ALF++    +   + +FKVD+NA+QL LTG V+ +   A+  LVVVEGGP SIK Y++LM  RI W       ++ G++ D +    XXXX         G    C LVW+GVV +R F+ F+FQEC T  TARK+L  K V  YWD V ++ P     DE
Sbjct:  114 LLLDEQGRHIDAMGNVLTDTVAPVATLKANLSVADAQKEVPKQVNPYLSFRSIEKE---DRVDWMDPRLKTTKR-ETRGAKNFSFVKQGTFVKQGEQMRAREAKKMLAGFSSGRNPNAYVKETVADVDESDDVATTAAATEAIEVPMKAD--EPVPEVEWWDMVFLPKDKQEIVDKNGHLKAMGRTNVLDYLGDLRLKHAGTSHLIEHPARIKVV--RKEQVVTLPIMLTKAERKRIRRTTRAERLKETQDKVALGLLPPPEPKVKLANMMRVLQDQAVADPSAVERKVRAQVAQREKNHEMRNLARKLTPEEKREKTLAKLKKDAAGDICVALFKVP--TLAHPQHKFKVDVNAQQLNLTGAVVTVAENADINLVVVEGGPKSIKAYVKLMCRRIDWSLKEVKPKEVGDEDDDEVTKEXXXXEGD------GKKPKCYLVWKGVVAKRAFSNFRFQECRTTVTARKVLEAKHVEQYWDMVESYNPALDGQDE 590          
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Match: A0A1V9YG71_9STRA (U4/U6 small nuclear ribonucleoprotein Prp3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG71_9STRA)

HSP 1 Score: 290 bits (743), Expect = 2.170e-84
Identity = 218/509 (42.83%), Postives = 290/509 (56.97%), Query Frame = 1
Query:  367 LMLDSQGRQVDAEGNVVKTQASAVASLKVNKQSMEQRKKN-------NPYLAHRKVGAEMDEDPADWVDGRLGPGRSWEAKGKKGLKFVEVGTFVKEGEVMRMREERRVQHGDGLGGRKNI---EKVVEFASAKKEEKP----AGELPKPHDWRAAIPVMEWWDEAFLEKGLRESKADGSLAPEKATTEALYAAA--KLQHCRFYKYVQHPVATRGAGEKAQAEVAMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKILGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLKRDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVI-ICPAANCELVVVEGGPGSIKKYIRLMLHRIKW----------VEEDFGEDQDSDXXXXXXXXXXXXXXXXXG----------------NSGMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWDQVANHTP 1764
            L+LDS+GR +DA+GNV++ + + VA+LK N   +E  +K        NPYL++R +  +   D  D VD RL   R+ E +G K   FV+ GT++K+GE +R RE +++  G   G   N    E V +     ++E P    A  L  P      +P +EWWD  +L K ++E+         +  +  +  AA  KL++      ++HP   R  G K QA VA+P+ LTK ERKRIRR AR E+ +E QDKIALGL+ P EPK+KLSN M++L DQA+ADPS +E  V  QV  RE  H  RN  RKLTP E+REK   KLK D A +   A+FR     +   + +FKVD+NA+QL LTG V+ +    +  LVVVEGGP SIK Y++LM  RI W          V +  G D    XXXXXXXXXXXXXXXXX                   G C LVW+G+V +R F GFKFQEC TA TARK+L  K V  YWD + ++ P
Sbjct:  113 LLLDSEGRHIDAQGNVIEEKVAPVATLKANLTGVEAAEKAKAAKKPVNPYLSYRTIEYK---DRVDAVDPRLKT-RNRETRGAKNFTFVKQGTYIKQGEQLRAREAKKMLAGFSSGRNPNAYVKETVADVDEDGEKEAPSTATADSLDVPMKMEEPVPEVEWWDIPYLPKEMQETLDKNGFLKGRGRSGVIDYAADMKLRYAGTAHLIEHPARIR-VGRKEQA-VALPLMLTKAERKRIRRTARAERLKEVQDKIALGLLPPPEPKVKLSNMMRVLQDQAVADPSAIERKVRAQVAQREQNHEMRNLARKLTPEERREKTLRKLKADAAGDIHVAIFRAPD--LSHPQHKFKVDVNAQQLHLTGAVVTVQEHPDLNLVVVEGGPKSIKHYVKLMCRRIDWNKRPPPRVAPVADGDGSDDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAPRPKTKKGKCYLVWRGLVAKRAFAGFKFQECKTATTARKVLEAKHVEQYWDMIESYNP 613          
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Match: A0A6G0X223_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X223_9STRA)

HSP 1 Score: 290 bits (741), Expect = 3.150e-84
Identity = 202/500 (40.40%), Postives = 269/500 (53.80%), Query Frame = 1
Query:  367 LMLDSQGRQVDAEGNVVKTQASAVASLKVN----KQSMEQRKKNNPYLAHRKVGAEMDEDPADWVDGRLGPGRSWEAKGKKGLKFVEVGTFVKEGEVMRMREERRVQHGDGLGGRKNIEKVVEFASAKKEEKPAGELPKP----HDW---------RAAIPVMEWWDEAFLEKGLRE--SKADGSLAPEKATTEALYAAAKLQHCRFYKYVQHPVATRGAGEKAQAEVAMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKILGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLKRDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVI-ICPAANCELVVVEGGPGSIKKYIRLMLHRIKWV-------EEDFGEDQDSDXXXXXXXXXXXXXXXXXGNSGMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWDQVANHTPGA*ELDE 1785
            L+LD QGR +DA GNV+    + VA+LK N        E +K  NPYLAHR +  E   D  D VD R+   +  E +G K   FV+ GTF+K+G+ MR RE +++  G   G  +N    V+   A  E+   GE  KP    HD             +P +EWWD  +L K  +E   K     A  ++ T       +L+H      ++HP   + A  + +  V +P+ LTK ERKRIRR  R E+ +E QDKIALGL+ P EPK+KL+N M++L DQA+ADPS VE  V  QV  RE  H  RN  RKLTP E+REK   KLK+D + +   ALF++    +   + +FKVD+NA+QL LTG V+ +    +  LVVVEGGP SIK YI+LM  RI W        E +   D D  X                G    C LVWQGVV +R F+ F+FQEC  A+ ARK+L  K V  YWD V ++ P    +DE
Sbjct:  126 LLLDDQGRHIDAMGNVLTDTVAPVATLKANIGVSDAQKEPQKPVNPYLAHRTIDKE---DRLDSVDPRVKV-KKRETRGAKNFAFVKQGTFIKQGDQMRAREAKKMLAGFSSG--RNPNAYVKETIADVEDDGDGEGEKPAAATHDQTHVDVPMKAETPVPEVEWWDIVYLPKDKQELVDKNGYLKAIGRSNTLDYNTDMRLKHAGTSHLIEHPARIKVA--RKEQVVTLPIMLTKAERKRIRRTTRAERLKETQDKIALGLLPPPEPKVKLANMMRVLQDQAVADPSAVERKVRAQVAQREKNHEMRNLARKLTPEERREKTLQKLKKDASGDICVALFKVP--ILTHPQHKFKVDVNAQQLHLTGAVLTVTENVHLNLVVVEGGPKSIKAYIKLMCRRIDWSLKETKPKEGEDAADGDXXXKNSVEQESDQEDEEMNGKKPKCYLVWQGVVAKRTFSNFRFQECRNAQLARKVLESKHVEQYWDMVESYNPALDGVDE 615          
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Match: A0A024U7N5_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7N5_9STRA)

HSP 1 Score: 286 bits (733), Expect = 3.190e-83
Identity = 191/487 (39.22%), Postives = 262/487 (53.80%), Query Frame = 1
Query:  367 LMLDSQGRQVDAEGNVVKTQASAVASLKVNKQSMEQRKKN----NPYLAHRKVGAEMDEDPADWVDGRLGPGRSWEAKGKKGLKFVEVGTFVKEGEVMRMREERRVQHGDGLGGRKNIEKVVEFASAKKEEKPAGE--------LPKPHDWRAAIPVMEWWDEAFLEKGLRESKADGSLAPEKATTEAL--YAAAKLQHCRFYKYVQHPVATRGAGEKAQAEVAMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKILGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLKRDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVI-ICPAANCELVVVEGGPGSIKKYIRLMLHRIKW----VEEDFGEDQDSDXXXXXXXXXXXXXXXXXGNS--GMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWDQVANHTP 1764
            L+LD QGR +DA+GNV+++  +  A++K N    + +K+     NPYL+ R +  +   D  D VD RL   +  E +G K   FV+ GTFVK+GE MR +E +++  G   G   N       A       P G+        +  P    A +P +EWWD  FL K  ++             T  L      +L+H      ++HP   +    + +  V +P+ LTK ERKRIRR  R E+ +E QDKIALGL+ P EPK+KL+N M++L DQA+ADPS VE  V  QV  REL H  RN  RKLTP E+REK   KLK+D A +   A+F++    +E  + +FKVD+NA+QL LTG V+ +   A   LVVVEGGP  IK Y++LM  RI W     +E+  ED+D +                        C LVWQGVV +R F+ F+FQEC  A TARK+L  K V  YWD V ++ P
Sbjct:  115 LLLDEQGRHIDADGNVIESTVATHATIKANISVADAQKEAPQAVNPYLSFRSIDKD---DRVDSVDPRLKT-KKRETRGAKNFNFVKQGTFVKQGEQMRAKEAKKMLAGFSSGRNPNAYVKETVADIPDAAGPTGDGDATTPAIVDVPMKPDAPVPEIEWWDIIFLPKDKQDLVDKHGFTKAIGRTSVLDYLVDLRLKHAGTSHLIEHPARIKTT--RKEQIVTLPIMLTKAERKRIRRTTRAERLKETQDKIALGLLPPPEPKVKLANMMRVLQDQAVADPSAVERKVRAQVAQRELNHEMRNLARKLTPEERREKTLAKLKKDAAGDICVAVFKVP--TLEHPQHKFKVDVNAQQLQLTGAVLTVTDNAALNLVVVEGGPKGIKAYVKLMCRRIDWSLKPAKEENAEDEDGEDGGNNEKDVDNDGEADEAGKKKAKCYLVWQGVVAKRAFSNFRFQECRNAITARKVLETKHVEQYWDMVESYNP 593          
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Match: A0A5D6XZ83_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZ83_9STRA)

HSP 1 Score: 287 bits (734), Expect = 4.420e-83
Identity = 205/537 (38.18%), Postives = 274/537 (51.02%), Query Frame = 1
Query:  280 QSAQSALGPI-ASLALSGAGAGPRKARDFSLMLDSQGRQVDAEGNVVKTQASA-VASLKVNKQ--------------SMEQRKKNNPYLAHRKVGAEMDEDPADWVDGRLGPGRSWEAKGKKGLK---FVEVGTFVKEGEVMRMREERRVQHGDGLGGRKN---IEKVVEFAS--AKKEEKPAGELPKPHDWR-----------AAIPVMEWWDEAFLEKGLRE-----SKADGSLAPEKATTEALYAAAKLQHCRFYKYVQHPVATRGAGEKAQAEVAMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKILGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLKRDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVIICPAANCELVVVEGGPGSIKKYIRLMLHRIKWV---EEDFGEDQDSDXXXXXXXXXXXXXXXXXGNSGMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWDQVANHT 1761
            QS Q  +G I A L     GA P       L+LD  GRQVD  G V++ +  A VA++K N+               + +Q +  NPYL+HR V  E   D  D VD RL   +         L    FV  GT+VK+GE +R RE +++  G   G        E +V  A   A  +   A + PKP               A +P +EWWD  +L K  R               E  T    Y   K++ C     ++HP       +K +  V +P+ LT  ERK+IRRQ R ++++EKQDKIALGL+ P EPK+KLSN M++L DQA+ADPS +E  V +QV  RE  H  RN  RKLTP E+REK   K+K D A +   A+FR+    + + + RFKVD+NA+Q  LTGGV+IC   N  +VVVEGG  +IK Y RL+  RI W+   ++ +G D D                     S  C LVWQG+V R+ FT F+FQEC + ETARK++  KGV  YWD V   T
Sbjct:   95 QSVQQQMGHIQALLRKPSGGAAPSTFMPAPLLLDEHGRQVDESGRVIEDKLPAPVATIKANQARSSSTGGGGDAPSATAKQPQHQNPYLSHRSVDKE---DAVDAVDPRLSVRKRETYDLYSSLTESCFVTQGTYVKQGEQVRAREAKKMLAGFTSGRNPRGYQKESIVPIAEDDADGDSTAAADNPKPAPTELFDVAVPPPPEAPVPDIEWWDIEYLPKDKRAVVDKFGFLKAKSRKEHPTVAVAYIDMKIKFCGTLHVIEHPARVSSLVKKDEEPVVLPLMLTAAERKKIRRQNRADREKEKQDKIALGLLPPPEPKVKLSNMMRVLADQAVADPSAIERKVREQVAQREKNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFRVPD--LSNPQHRFKVDVNAQQYHLTGGVLICKEENANMVVVEGGKKAIKHYTRLLTKRIDWLGDADDSYGGDSDDXDDESKQRR----------RSNSCSLVWQGIVARKAFTNFRFQECRSVETARKVMEAKGVVQYWDLVVQST 616          
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Match: A0A6A3TVC5_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3TVC5_9STRA)

HSP 1 Score: 285 bits (730), Expect = 1.480e-82
Identity = 197/493 (39.96%), Postives = 269/493 (54.56%), Query Frame = 1
Query:  367 LMLDSQGRQVDAEGNVV--KTQASAVASLKVNKQSMEQ----RKKNNPYLAHRKVGAEMDEDPADWVDGRLGPGRSWEAKGKKGLKFVEVGTFVKEGEVMRMREERRVQHGDGLGGRKN-------------IEKVVEFAS-AKKEEKPAGELP-KPHDWRAAIPVMEWWDEAFLEKGLRESKADGSLAPEKATTE-----ALYAAAKLQHCRFYKYVQHPVATRGAGEKAQAEVAMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKILGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLKRDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVIICPAANCELVVVEGGPGSIKKYIRLMLHRIKWV------EEDFGEDQDSDXXXXXXXXXXXXXXXXXGNSGMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWDQV 1749
            L+LD QGR++DA GNVV  K   + VA+LK N+         +K  NPYL+HR V    +ED  + VD RL   +  E + +K   FV  GT+VK+ E +R R+ +++  G   G                  E + E A  A K E  + E+P KP     + P +EWWD  +L K  R           K   E       Y   KL++C     ++HP       ++    VA+P+ LT  ERK+IRRQ R ++++EKQDKIALGL+ P EPK+KLSN M++L +QA+ADPS +E  V +Q+  RE  H  RN  RKLTP E+REK   K+K D A +   A+F++    + + + RFKVD+NA+Q  LTGGV+IC   N  +VVVEGG  +IK+Y +LM+ RI W       +E   ED+D+                  GN   C LVWQGVV R+ F  F+FQEC TA TARK++  K V HYWD V
Sbjct:  149 LLLDEQGREIDAAGNVVAEKPTVAPVATLKANQGGARGGDAVKKSKNPYLSHRTVD---EEDKLETVDPRLKVTKR-ETRARKTFNFVAQGTYVKQAEQVRARDAKKMMAGFTSGRNPRGYQKESIIPIDEPTEPIPEDAEKASKMEIDSVEVPPKPE---TSTPDVEWWDVEYLPKDKRAMVDKFGFIKAKVRKEDPGATVCYTDMKLKYCGTAHVIEHPARLNLIVKQDDKPVAVPLMLTAAERKKIRRQNRADREKEKQDKIALGLLPPPEPKVKLSNMMRVLSEQAVADPSAIERKVREQIAQRENNHEMRNLARKLTPEERREKKLRKIKEDAAGDIHVAVFKVPD--LSNPQHRFKVDVNAQQYHLTGGVLICKDGNINMVVVEGGKKAIKQYTKLMMRRIDWQGSHEAEQESDSEDEDA---------------AKRGNG--CLLVWQGVVARKAFNNFRFQECRTAVTARKVMEAKSVVHYWDLV 615          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1017.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S2G0F4_9STRA3.910e-9643.78Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
K3W6M6_GLOUD4.870e-8743.35Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A421H1J6_9STRA1.870e-8641.39Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
A0A8K1CCE6_PYTOL2.380e-8642.77Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A485LNQ5_9STRA1.680e-8541.18Aste57867_23179 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9YG71_9STRA2.170e-8442.83U4/U6 small nuclear ribonucleoprotein Prp3 n=1 Tax... [more]
A0A6G0X223_9STRA3.150e-8440.40Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A024U7N5_9STRA3.190e-8339.22Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A5D6XZ83_9STRA4.420e-8338.18Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A6A3TVC5_9STRA1.480e-8239.96Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1017contigC-australica_Contig_1017:1196..5307 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog65071.PYU1_T000617
PFAMsDUF1115,PRP3
Model size2368
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons14
Evalue1.88e-90
EggNOG OGsKOG2769@1|root,KOG2769@2759|Eukaryota,1MGK4@121069|Pythiales
Ec32 ortholog descriptionPre-mRNA-splicing factor 3
Ec32 orthologEc-04_005660.1
DescriptionU4 U6 small nuclear ribonucleoprotein Prp3. Source PGD
Cds size1680
COG categoryA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1017.1.2prot_C-australica_Contig_1017.1.2Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1017 1866..5214 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586751.5131376-UTR-C-australica_Contig_1017:1195..12781682586751.5131376-UTR-C-australica_Contig_1017:1195..1278Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1017 1196..1278 -
1682586751.5223558-UTR-C-australica_Contig_1017:1353..18651682586751.5223558-UTR-C-australica_Contig_1017:1353..1865Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1017 1354..1865 -
1682586751.6672425-UTR-C-australica_Contig_1017:5214..53071682586751.6672425-UTR-C-australica_Contig_1017:5214..5307Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1017 5215..5307 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586751.530648-CDS-C-australica_Contig_1017:1865..18991682586751.530648-CDS-C-australica_Contig_1017:1865..1899Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 1866..1899 -
1682586751.5393097-CDS-C-australica_Contig_1017:1983..20591682586751.5393097-CDS-C-australica_Contig_1017:1983..2059Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 1984..2059 -
1682586751.5485325-CDS-C-australica_Contig_1017:2218..23391682586751.5485325-CDS-C-australica_Contig_1017:2218..2339Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 2219..2339 -
1682586751.5583332-CDS-C-australica_Contig_1017:2471..25551682586751.5583332-CDS-C-australica_Contig_1017:2471..2555Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 2472..2555 -
1682586751.5678434-CDS-C-australica_Contig_1017:2766..29171682586751.5678434-CDS-C-australica_Contig_1017:2766..2917Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 2767..2917 -
1682586751.578011-CDS-C-australica_Contig_1017:3118..32251682586751.578011-CDS-C-australica_Contig_1017:3118..3225Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 3119..3225 -
1682586751.588031-CDS-C-australica_Contig_1017:3392..35181682586751.588031-CDS-C-australica_Contig_1017:3392..3518Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 3393..3518 -
1682586751.5987077-CDS-C-australica_Contig_1017:3768..39161682586751.5987077-CDS-C-australica_Contig_1017:3768..3916Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 3769..3916 -
1682586751.608756-CDS-C-australica_Contig_1017:4020..44361682586751.608756-CDS-C-australica_Contig_1017:4020..4436Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 4021..4436 -
1682586751.6200914-CDS-C-australica_Contig_1017:4521..45811682586751.6200914-CDS-C-australica_Contig_1017:4521..4581Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 4522..4581 -
1682586751.631436-CDS-C-australica_Contig_1017:4650..48781682586751.631436-CDS-C-australica_Contig_1017:4650..4878Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 4651..4878 -
1682586751.6431081-CDS-C-australica_Contig_1017:4948..50191682586751.6431081-CDS-C-australica_Contig_1017:4948..5019Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 4949..5019 -
1682586751.6548522-CDS-C-australica_Contig_1017:5156..52141682586751.6548522-CDS-C-australica_Contig_1017:5156..5214Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1017 5157..5214 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1017.1.2

>prot_C-australica_Contig_1017.1.2 ID=prot_C-australica_Contig_1017.1.2|Name=mRNA_C-australica_Contig_1017.1.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=560bp
MAGEENGAGKRTREEEDVAGAKKTKRRRSRFSDAPAIQPASVQVNGDLAQ
MAALQAQLDAQIQSAQSALGPIASLALSGAGAGPRKARDFSLMLDSQGRQ
VDAEGNVVKTQASAVASLKVNKQSMEQRKKNNPYLAHRKVGAEMDEDPAD
WVDGRLGPGRSWEAKGKKGLKFVEVGTFVKEGEVMRMREERRVQHGDGLG
GRKNIEKVVEFASAKKEEKPAGELPKPHDWRAAIPVMEWWDEAFLEKGLR
ESKADGSLAPEKATTEALYAAAKLQHCRFYKYVQHPVATRGAGEKAQAEV
AMPVFLTKRERKRIRRQARLEKQREKQDKIALGLMKPEEPKMKLSNFMKI
LGDQAIADPSKVEAMVAKQVRARELAHIARNQVRKLTPMEKREKVEGKLK
RDQAKETKTALFRLTKGAMEDAKRRFKVDMNARQLGLTGGVIICPAANCE
LVVVEGGPGSIKKYIRLMLHRIKWVEEDFGEDQDSDDSDDEELGGHGGND
GLEGNSGMCELVWQGVVLRRVFTGFKFQECATAETARKLLAQKGVPHYWD
QVANHTPGA*
back to top

mRNA from alignment at C-australica_Contig_1017:1196..5307-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1017.1.2 ID=mRNA_C-australica_Contig_1017.1.2|Name=mRNA_C-australica_Contig_1017.1.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4112bp|location=Sequence derived from alignment at C-australica_Contig_1017:1196..5307- (Chrysoparadoxa australica CS_1217)
CTCTCACCGGATCCAAAAGTAGCCCTCCCACTCCCTCCGCTGCAGGGCAG AGGAATCACCGACTCCACAGCAAGGAGGGTTGCACTACCAGCAATGGCTG GTGAGGAGAACGGGGCTGGCAAGAGGACGAGGGAGGAGGAGGATGTTGCA GGTGAGGGGATTGTGGCTTCTCCTTTCCGTAGCTTGCTGGAGGACTATGC ATAAGGGGCACCCTCCGCAAACTCTCCCGAGCAAGAGCTGAGCTTGTAGC AGGCTGTACGCTCAGACCTGGCCTCCCCTGCCCCCCAGGTGCTAAGAAGA CCAAGCGGAGAAGAAGTAGGTTCTCCGATGCCCCTGCAATTCAGCCTGCA TCAGTTCAGGTGATTGAGAGCAAGCTGTGGGGAGCAGAAGCACTCCCGTC TCTGACCCCGCTTGTGCACGTTCATTCAGGTTAATGGAGATCTGGCCCAA ATGGCTGCCCTTCAGGCCCAATTGGATGCCCAGATCCAGAGCGCTCAATC AGCCCTGGGCCCAATAGCTTCACTGGCTCTGTCTGGGGCTGGTGCAGGCC CCCGCAAGGCTAGGGACTTCAGCCTGATGCTTGACAGCCAGGGTAGGCAA GTGGATGCTGAAGGCAATGTAGTGAAGACCCAGGCATCAGCAGTTGCCTC ACTGAAGGTGAGGCAACTGCCACGAAAGTGCTCCTGCGTCACCTCCCATG ACCTCTCATGCTCCCCTCCATCCCAGGTCAACAAGCAGTCCATGGAGCAG CGGAAGAAGAACAATCCCTACCTAGCGCACAGAAAGGTGGGGTGTTAGAA GGTGTTAGACCAGTGCAAGCCTTTGCAGGCGCTGCATATAGCCTTACCTT CTCATGCTGCCTTGCTTGCAGGTGGGTGCTGAGATGGATGAGGATCCAGC AGACTGGGTGGATGGGAGGCTGGGCCCCGGCAGAAGCTGGGAGGCAAAGG GAAAGAAAGGACTCAAGTTTGTGGAGGTGGGCACGTTCGTGAAGGAGGGA GAGGTGATGAGGATGCGAGAGGAGAGAAGGGTACAGCACGGTGACGGTCT GGGTGGCCGGAAGAACATTGAGAAGGTTGTGGAGTTTGCCAGTGCCAAGA AGGAGGAGAAACCAGCCGGGGAGCTGCCCAAGCCGCATGACTGGCGGGCT GCTATACCAGTGATGGAGTGGTGGGACGAGGCGTTTCTGGAGAAGGGCCT CAGAGAGAGCAAGGCAGACGGCTCGCTGGCTCCGGAGAAGGCGACGACTG AAGCGCTTTACGCAGCAGCCAAGCTGCAGCACTGCAGGTATCACTTGGAG CACCATCACCTGTGCTCATCATTGTGTCCTCTTGCCCTCGCCTGCAGTAC TTGCCGTATTCTTACCTTCCCTTCCTTCCTGCCTTGCGTAGGTTCTACAA ATACGTCCAGCACCCTGTTGCTACCAGAGGAGCAGGCGAGAAGGCGCAGG CCGAGGTGGCCATGCCGGTGTTCTTGACCAAGAGGGAAAGGAAGAGGATC AGGAGGCAAGCCAGACTAGAGAAGCAGCGGGAGAAACAGGTCAGTGGGAT CAGTGGTAGTAGGAAGGGACTTGTGTTTATGACTTGACCGGTAGATGAAG TATGTAACTGGGAGTAACTAGCTTGGCTTGCTAGTAGTTACTAGCTAATA GCTGGTAGAGGTGGTAAAGTCCTGGTGTGTTGCAAGCAATGGCTTTGCTC TAGGCAGTGTTAGTATTGGACAACCAGGCTCTCTCACGCTGCTTTTGGCT TTAACCTCTCACTGGTCTGGCCACTCTTGCTCATACCAGGACAAGATAGC ACTCGGCCTCATGAAGCCAGAGGAGCCGAAGATGAAGCTGTCAAACTTCA TGAAGATTCTAGGTGACCAGGCCATCGCAGACCCGTCCAAGGTGGAAGCC ATGGTGGCCAAGCAGGTGAGGGATGAGAGTGAGCATGTGATGAGGAGGAG CCCCCCATCTGTCCAAACGATAACATATACTTATGCTTAACTTGTTATGC TCTTTTCTTGACTGCTCACCCTGTCTGTTGTGTATCCCTGCCTGACACGC AAGCACCTCTTGGCCTCAACCGTGCTCATCAGGTCAGAGCTCGTGAGCTT GCACATATTGCCAGGAACCAGGTCAGGAAGCTGACGCCGATGGAGAAGAG GGAGAAGGTTGAAGGGAAGCTCAAGAGGGATCAGGCCAAGTGAGTCACAT CCTTACAGCCTCAGAGGCCACGAGAGGAATTGCAACTAACGCATGCTTCA AGTGGCGGAGGAATTACCCCCGCTTGCTGTACCACCTCATTAGCCTCATT AGCTTCATTAGCCTGTTTGTTCCTTTCCTACCCCTGACCAACCCGACTCC TGGTCAGCAACTCATAAGGTCTCCCTCATCTCGTACCCAGGGAAACCAAA ACGGCTCTCTTCCGCCTCACCAAGGGCGCCATGGAAGATGCCAAGAGACG GTTTAAAGTTGATATGAATGCCCGTCAGCTGGGCCTGACGGGAGGTGTCA TCATCTGCCCTGCCGCCAATTGTGAGCTGGTGGTTGTTGAGGTAGGTGAA CTTTGATTGGAGCTAGCCAATGCAGGCCTTCAATGTGATGGACCGGGCTG CTGCCAGCTTTGGACTAGGGTCCAGATCATCTTGGCAACATTCATGCTCT ACGCTCTCGTATTGAGTCCACATTTGTTCTTTGTCAGGGCTCTCCCACTC ATCCCACTGACTGATCTCACTATCACTCATCTCACTAACTCTATTTTCTC AGGGTGGCCCCGGATCGATCAAGAAGTACATCCGACTGATGCTGCACCGG ATTAAATGGGTAGAGGAAGACTTTGGGGAGGATCAGGTACTGATAAGCTG CTCATTATTCCCTTACCCCGCCTCAGTAGTAAACCAACCCTAAGCTGCTG AATTGGTTTACGCTCTGGCTACATCCATTGCATCACCTCACCTCTGCATG TTGCTCTGGTTCCCACAGGACAGCGATGACAGTGATGACGAGGAGCTTGG AGGGCACGGGGGCAATGACGGCTTGGAAGGCAACAGTGGCATGTGTGAGC TTGTCTGGCAAGGGGTGGTGCTTCGGAGGGTCTTTACTGGTGAGTGGAAG CACTCAATGACTGAATGCCCGAATGACTGAAGGTGGTGATACGGATGTGA ATTTGGAGAGTAGTCATTAGTATTTGGAGACCATGGCATGTCTTAATCTT TTCATCCCCCCTTATAGCTAACCAGTTTGCTGAATGCACTTGAATCAGGG TTCAAGTTCCAGGAGTGCGCAACAGCTGAGACTGCCAGAAAGCTGCTTGC ACAAAAAGGGGTGCCGCACTATTGGTACTAATGACAACAGCCACCTCTGT AGGCCTCCCTCAGGCATAGCATAGGATTGACGCTCTCTCTCATCTGCCAC TTGCCCAGGGACCAAGTGGCGAACCATACACCTGGAGCCTAAGAGCTTGA TGAGAAGACTAAAGCACAAAATCAGCAAGCCACACTACAGGACATTGTCG TGAGCATGGATGTAATAGATGGCTTAAGCGCTACAAATGTCTGGCTACCG CCCCTCTACCAATTTTGCTAATGTCCTGGTAGTCCACCTGATCCCTGTAT ATACATAGTGTATTGCTGGCTCCATCAGGGGCTAACATCTCTGTTCACAA CCCCTTTCTCTCTCTCATGTGTATCCAACACCCAATCTCTGGTGTTTTCC CTCCCACAGCTCCTTTTTTTATCCTTCTGGCCTATAGAGTAGGTTAATGT AGGGATGCATGTATGCCTCCAGAGACTCTTTCCATAGCTTCCCCTTTCTC AGTTCCCTCTTGAGCGCCCTGGACGTCTGCCATTATGTCAAAACAGGTGA GATACCTGGCAAGGTCTGGCACCATTGGGGAGTTAATAAGGTCCATCAAG GACATCACCAACCCACAACCAACGTCTTCAGAGAAGTACCTAAAACACAG CGAGGTCAGGTCTACTTTGAGAGTTGATCAGATGCTCAAGCTTAGCTTGT TGCCCTTCTTACCTGTAATCTCAGCGTAGCTGCAATAGCCCTGCTTCTCC GACGTTACTGTTATCACTCTATAAGTAGAGCTACGCGCTACACAATACGT ATACCGGGTCGA
back to top

Coding sequence (CDS) from alignment at C-australica_Contig_1017:1196..5307-

>mRNA_C-australica_Contig_1017.1.2 ID=mRNA_C-australica_Contig_1017.1.2|Name=mRNA_C-australica_Contig_1017.1.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1680bp|location=Sequence derived from alignment at C-australica_Contig_1017:1196..5307- (Chrysoparadoxa australica CS_1217)
ATGGCTGGTGAGGAGAACGGGGCTGGCAAGAGGACGAGGGAGGAGGAGGA
TGTTGCAGGTGCTAAGAAGACCAAGCGGAGAAGAAGTAGGTTCTCCGATG
CCCCTGCAATTCAGCCTGCATCAGTTCAGGTTAATGGAGATCTGGCCCAA
ATGGCTGCCCTTCAGGCCCAATTGGATGCCCAGATCCAGAGCGCTCAATC
AGCCCTGGGCCCAATAGCTTCACTGGCTCTGTCTGGGGCTGGTGCAGGCC
CCCGCAAGGCTAGGGACTTCAGCCTGATGCTTGACAGCCAGGGTAGGCAA
GTGGATGCTGAAGGCAATGTAGTGAAGACCCAGGCATCAGCAGTTGCCTC
ACTGAAGGTCAACAAGCAGTCCATGGAGCAGCGGAAGAAGAACAATCCCT
ACCTAGCGCACAGAAAGGTGGGTGCTGAGATGGATGAGGATCCAGCAGAC
TGGGTGGATGGGAGGCTGGGCCCCGGCAGAAGCTGGGAGGCAAAGGGAAA
GAAAGGACTCAAGTTTGTGGAGGTGGGCACGTTCGTGAAGGAGGGAGAGG
TGATGAGGATGCGAGAGGAGAGAAGGGTACAGCACGGTGACGGTCTGGGT
GGCCGGAAGAACATTGAGAAGGTTGTGGAGTTTGCCAGTGCCAAGAAGGA
GGAGAAACCAGCCGGGGAGCTGCCCAAGCCGCATGACTGGCGGGCTGCTA
TACCAGTGATGGAGTGGTGGGACGAGGCGTTTCTGGAGAAGGGCCTCAGA
GAGAGCAAGGCAGACGGCTCGCTGGCTCCGGAGAAGGCGACGACTGAAGC
GCTTTACGCAGCAGCCAAGCTGCAGCACTGCAGGTTCTACAAATACGTCC
AGCACCCTGTTGCTACCAGAGGAGCAGGCGAGAAGGCGCAGGCCGAGGTG
GCCATGCCGGTGTTCTTGACCAAGAGGGAAAGGAAGAGGATCAGGAGGCA
AGCCAGACTAGAGAAGCAGCGGGAGAAACAGGACAAGATAGCACTCGGCC
TCATGAAGCCAGAGGAGCCGAAGATGAAGCTGTCAAACTTCATGAAGATT
CTAGGTGACCAGGCCATCGCAGACCCGTCCAAGGTGGAAGCCATGGTGGC
CAAGCAGGTCAGAGCTCGTGAGCTTGCACATATTGCCAGGAACCAGGTCA
GGAAGCTGACGCCGATGGAGAAGAGGGAGAAGGTTGAAGGGAAGCTCAAG
AGGGATCAGGCCAAGGAAACCAAAACGGCTCTCTTCCGCCTCACCAAGGG
CGCCATGGAAGATGCCAAGAGACGGTTTAAAGTTGATATGAATGCCCGTC
AGCTGGGCCTGACGGGAGGTGTCATCATCTGCCCTGCCGCCAATTGTGAG
CTGGTGGTTGTTGAGGGTGGCCCCGGATCGATCAAGAAGTACATCCGACT
GATGCTGCACCGGATTAAATGGGTAGAGGAAGACTTTGGGGAGGATCAGG
ACAGCGATGACAGTGATGACGAGGAGCTTGGAGGGCACGGGGGCAATGAC
GGCTTGGAAGGCAACAGTGGCATGTGTGAGCTTGTCTGGCAAGGGGTGGT
GCTTCGGAGGGTCTTTACTGGGTTCAAGTTCCAGGAGTGCGCAACAGCTG
AGACTGCCAGAAAGCTGCTTGCACAAAAAGGGGTGCCGCACTATTGGGAC
CAAGTGGCGAACCATACACCTGGAGCCTAA
back to top