Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 0 |
| Start | 1 |
| Model size | 255 |
| Hectar predicted targeting category | other localisation |
| Exons | 2 |
| Cds size | 222 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586750.7014458-CDS-C-australica_Contig_1016:13223..13385 | 1682586750.7014458-CDS-C-australica_Contig_1016:13223..13385 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1016 13224..13385 - |
| 1682586750.7181895-CDS-C-australica_Contig_1016:13448..13508 | 1682586750.7181895-CDS-C-australica_Contig_1016:13448..13508 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1016 13449..13508 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586750.728427-UTR-C-australica_Contig_1016:13508..13539 | 1682586750.728427-UTR-C-australica_Contig_1016:13508..13539 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1016 13509..13539 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1016.6.1 >prot_C-australica_Contig_1016.6.1 ID=prot_C-australica_Contig_1016.6.1|Name=mRNA_C-australica_Contig_1016.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=74bp
MDAEGGEGANVSIPHPTVDEVPQAKTLPSLLLELSAVHEELDAQLHGVTQ
AADGRLHALMSSAGSASLSQEDII back to topmRNA from alignment at C-australica_Contig_1016:13224..13539- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1016.6.1 ID=mRNA_C-australica_Contig_1016.6.1|Name=mRNA_C-australica_Contig_1016.6.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=316bp|location=Sequence derived from alignment at C-australica_Contig_1016:13224..13539- (Chrysoparadoxa australica CS_1217)
CCTCGGGGTTGCGTGGGTTATTGGGGCCATAATGGACGCAGAGGGTGGGG
AGGGCGCTAATGTATCGATCCCGCATCCAACCGTAGACGAGGTCAGGCAG
CCAACAGTGACTTGCCTACCTCCCCTCCTTGACCGTTGCTTATGTCAACG
TTAGGTACCTCAAGCCAAGACATTGCCATCCCTTCTGCTCGAGCTCTCTG
CAGTGCACGAAGAGCTCGATGCCCAGCTCCATGGGGTGACTCAGGCAGCT
GATGGAAGGCTGCATGCGCTCATGAGCAGCGCTGGGAGCGCTTCTCTGTC
ACAGGAGGATATCATA back to topCoding sequence (CDS) from alignment at C-australica_Contig_1016:13224..13539- >mRNA_C-australica_Contig_1016.6.1 ID=mRNA_C-australica_Contig_1016.6.1|Name=mRNA_C-australica_Contig_1016.6.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=222bp|location=Sequence derived from alignment at C-australica_Contig_1016:13224..13539- (Chrysoparadoxa australica CS_1217)
ATGGACGCAGAGGGTGGGGAGGGCGCTAATGTATCGATCCCGCATCCAAC
CGTAGACGAGGTACCTCAAGCCAAGACATTGCCATCCCTTCTGCTCGAGC
TCTCTGCAGTGCACGAAGAGCTCGATGCCCAGCTCCATGGGGTGACTCAG
GCAGCTGATGGAAGGCTGCATGCGCTCATGAGCAGCGCTGGGAGCGCTTC
TCTGTCACAGGAGGATATCATA back to top
|