mRNA_C-australica_Contig_1016.3.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1016.3.1
Unique NamemRNA_C-australica_Contig_1016.3.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Match: A0A836C6X3_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6X3_9STRA)

HSP 1 Score: 313 bits (801), Expect = 7.030e-99
Identity = 162/335 (48.36%), Postives = 232/335 (69.25%), Query Frame = 1
Query:  382 KAQQREMNRQHARNTRARKKQHLESLQSRIKSLEAEKTAKAEAKSGAAKELAKEQQTWHQALKTVLEFRTSGRIDEERWRTILSEEFKFTLPITPYRSYNPTDLVNSRRIVVGVDGMASDTASLMVMCENIAPKSIGKESPVNIEYLLSS--SEHMFMGPSGLMSTFLLRTTDAVAKGAACELEQSGMIRAQFGNDGKLEEMDMMFDAIAWYQQLSKATRVESFPVIPNSLAEAYKLEKENVVITTAQQPFIIQHINKAWTNLCGYTLDECEGKPLSILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFRNHLQCYPLADDPKTGEIT 1380
            K Q+RE NR HARNTRARKK + + L +++ +L  EK    +A++ A+K    +Q  W   L+  ++ R +G +DE +W  IL+E+FK T+P+TPYRS++P+D+VN+RR+++GVDGM +DTASL VM +NI  K+   E  V +EYLL S  +E+ F G +GLM TF++RT DA A GAACE E+SG++RA+F + G +EE++M FD IA Y QL +A     FP++PN+L    K +K+++V+TTAQ+PF I H+N AWT LCG+ LDEC+GK LSIL+  +TD   V  L    +    AS V+ +  KSG  FRNHL+CYP++ D  +GEI+
Sbjct:   54 KKQERERNRMHARNTRARKKAYADELTAKLAALTKEKEEHEKAEAEASKARTVQQSAWAATLRQAMDLRAAGCLDEAQWSKILAEDFKMTMPVTPYRSFSPSDVVNNRRVLLGVDGMVADTASLQVMLDNIGTKTRKNEGRVRVEYLLGSDAAENCFFGAAGLMCTFMMRTLDAKAHGAACECEKSGILRARFDDAGCIEELEMAFDGIAMYHQLMRAKGQGDFPLVPNTLNAVLKNDKDHIVVTTAQRPFRITHVNGAWTQLCGFELDECKGKNLSILQGPETDMDTVTELVDISQRGYPASMVVTNYDKSGRPFRNHLRCYPISSDD-SGEIS 387          
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Match: A0A6H5K0R4_9PHAE (PAS domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0R4_9PHAE)

HSP 1 Score: 276 bits (706), Expect = 6.450e-84
Identity = 157/346 (45.38%), Postives = 220/346 (63.58%), Query Frame = 1
Query:  382 KAQQREMNRQHARNTRARKKQHLESLQSRIKSLEAEKTAKAEAKSGAAKELAKEQQTWHQALKTVLEFRTSGRIDEERWRTILSEEFKFTLPITPYRSYNPTDLVNSRRIVVGVDGMASDTASLMVMCENIAPKSIGKESPVNIEYLLSSSEH---MFMGPSGLMSTFLLRTTDAVAKGAACELEQSGMIRAQFGND-GKLEEMDMMFDAIAWYQQLSKATRVESFPVIPNSLAEAYKLEKENVVITTAQQPFIIQHINKAWTNLCGYTLDECEGKPLSILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFRNHLQCYPLADDPKTGEITSFAIIMSAL 1407
            K   RE NR+ AR +R  KKQ  + +Q ++  LE E    A  +  AAK+L   +    QAL+ V + R  G  DE  W  +LS + + T+PITPYRS+NP D+VN+RR+++GVDGM SDT SL V+ +NI  K+   ESPV+I++ L+S       F    GLM +F +RT DAV   A  E E +GM+R +F +D  K+EE+DM FDAI+ YQQL  A+  E FP +PN+L  A K E   +V+TTA +PF I H+NKAWT LCG+ L+ECEGK LSIL+  +TD + V+ L    +   A S V+ + +K G +FRNHLQCYP++ D + GEI+    +++A+
Sbjct:   91 KLMDRERNRRQARKSRELKKQCADKMQQQLIQLEKESAEAAAREKEAAKKLKDCRTARCQALRKVFDLRADGCTDEASWLEVLSPDLRMTMPITPYRSFNPADVVNNRRVLLGVDGMISDTQSLSVLLDNIGVKTRLYESPVSIKFTLASDADEGGAFFSRDGLMCSFTMRTLDAVKHAARREWEVNGMVRVRFNSDTNKIEELDMTFDAISCYQQLMLASGKEDFPPVPNTLDNALKDETSPIVVTTAARPFRITHVNKAWTELCGFELEECEGKSLSILQGPETDMTRVDKLCKLSQKGYATSMVVTNHNKKGELFRNHLQCYPVSSD-EPGEISHIVGMLTAI 435          
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Match: A0A836CN81_9STRA (BZIP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN81_9STRA)

HSP 1 Score: 201 bits (512), Expect = 1.330e-54
Identity = 120/338 (35.50%), Postives = 189/338 (55.92%), Query Frame = 1
Query:  394 REMNRQHARNTRARKKQHLESLQSRIKSLEAEKTAKAEAKSGAAKELAKEQQTWHQALKTVLEFRTSGRIDEERWRTILSEEFKFTLPITPYRSYNPTDLVNSRRIVVGVDGMASDTASLMVMCENIAPKSIGKESPVNIEYLLSSSEHMFMGPSGLMSTFLLRTTDAVAKGAACELEQSGMIRAQFGNDGKLEEMDMMFDAIAWYQQLSKATRVESFPVIPNSLAEAYK-LEKENVVITTAQQPFIIQHINKAWTNLCGYTLDECEGKPLSILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFRNHLQCYPLADDPKTGEITSFAIIMSA 1404
            R+ NR+HARNTR RKK ++E L+  ++ L AE+ A A AK+      A+ Q      L+  L +R +G      W T L E F   LPITPYRS+   ++V+ +R++VG+D M +D ASL +M E++  +    E  V ++Y     + +  G   L   ++LRT +A A GA CE    GM+RA++    KL  +++ FD + + QQL +A+ +E F V+PN+LA A    + +   ITTA+ P++I H + AW  LCGY  +E  G+  ++L+   TD +AV    G +      S  + + +K+G  F N++  YPL+ D   G +T +   +SA
Sbjct:  118 RDRNRKHARNTRLRKKAYIEELERTVQQLTAERDAAAAAKAAEGARAAQLQSVRFSVLQMALFYRAAGNTCRADWATALEESFTCVLPITPYRSFPSAEVVSGQRMIVGIDAMIADVASLALMVESVG-RCRPSERRVQVQYYAGPEDAITSGDM-LSCRWMLRTENAAACGALCECHAQGMLRARYSPSHKLAHLELAFDVMGFMQQLQRASGLEDFRVVPNTLAMAQAPCDADARFITTAEPPYLIVHASPAWCRLCGYASEEAVGRTAALLQGPATDRAAVARFMGAVRARHCCSMEVVNYTKAGVPFANYIVAYPLSTD---GRVTHYLATISA 450          
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Match: A0A7S2DLD9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DLD9_9STRA)

HSP 1 Score: 184 bits (468), Expect = 6.430e-49
Identity = 108/333 (32.43%), Postives = 188/333 (56.46%), Query Frame = 1
Query:  394 REMNRQHARNTRARKKQHLESLQSRIKSLEAEKTA-KAEAKSGAAKELAKEQQTWHQALKTVLEFRTSGRIDEERWRTILSEEFKFTLPITPYRSYNPTDLVNSRRIVVGVDGMASDTASLMVMCENIAPKSIG---KESPVNIEYLLSSSEHMFMGPSGLMSTFLLRTTDAVAKGAACELEQSGMIRAQFGNDGKLEEMDMMFDAIAWYQQLSKATRVESFPVIPNSLAEAYKLEKENVVITTAQQPFIIQHINKAWTNLCGYTLDECEGKPLSILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFRNHLQCYPLADDPKTGEIT 1380
            RE NR+HAR TR RKK+++E+L+S+++ L A+  A + + K     + AK    W   L+  L  R S   D+ RWR  + +E     PITPYRSY   D++++R +++G+  +  D ASL++    +  + I    +   V + + +   + M     G+M  F +R+++    G   E+ + G +RA F ++GK++++++ FD IA+++QL  A+  +   + PN++  A +   +  VIT A +PF I H+N AWT LCG+T +E  GK LS+++  +TD   V  L    ++  A+S    + +K G  F N+LQ +PLA    +G+++
Sbjct:  127 RERNRRHARETRLRKKEYMETLKSQLEQLSAQNAALEKQIKDKRLGQDAKHD-LWITKLQGALALRASAEPDQSRWRNFVDDEIVLVHPITPYRSYRSADVISNRCVLMGIQDIIDDAASLLIALAGLCNEGIHDGTRNQKVQLRFNIDE-QGMHYREEGIMCPFDMRSSNLTPLGLKSEVNKRGCLRAIFNSEGKVKQLELHFDPIAFWRQLQHASGAKEVLLAPNTVEGALRHSHDARVITEATRPFRITHVNAAWTELCGFTAEEAYGKTLSLIQGPKTDPDTVAKLCKDCDHGRASSMKTVNYTKQGEEFNNYLQIFPLASSSSSGDVS 457          
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Match: A0A7S2B104_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B104_9STRA)

HSP 1 Score: 183 bits (465), Expect = 1.760e-47
Identity = 113/341 (33.14%), Postives = 190/341 (55.72%), Query Frame = 1
Query:  394 REMNRQHARNTRARKKQHLESLQSRIKSLEAE-KTAKAEAKSGAAKELAKEQQTWHQALKTVLEFRTSGRIDEERWRTILSEEFKFTLPITPYRSYNPTDLVNSRRIVVGVDGMASDTASLMVMCENIAPKSIGKESPVNIEYLLSSSEHMFMGPSGLMSTFLLRTTDAVAKGAACELEQSGMIRAQFGNDGKLEEMDMMFDAIAWYQQLSKATRVESFPVIPNSLAEAYKLEKENVVITTAQQPFIIQHINKAWTNLCGYTLDECEGKPLSILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFRNHLQCYPLADDPKTG-EITSFAIIMSALQ 1410
            R+ NR+HARNTR RKK ++E L+  ++ L  E +T   + +     E    +Q  HQ ++ ++ +RTSG ++ E+W+ +L+++F  TLPITP+R +NP ++V  RR+V GV GM  DTAS  V+  +I  +       V + + +   E +       M+ + + TT+A++KGA  E    GM++A F ++  +  +D++FD +++ QQL +A     F V+PNS+    +  KE  VI +A  PF I+  N+ W ++CG+T  E  GK   I++  +TD   V  L   ++  L  S +  +  KSG  F N ++ +P+     TG E+T F  ++   Q
Sbjct:  251 RDRNREHARNTRLRKKAYIEKLKQTVQVLSKECETITRDNQQDEVNETEILEQR-HQVIQRMMNYRTSGVVNPEKWQAVLAQDFTMTLPITPHRFFNPNEVVGCRRVVRGVSGMIQDTASFKVLISSIGRRKYRGHGEVEVNFNMPDGETVIKNDL-FMTRWTMSTTNAMSKGALAECSLEGMLKATFADENTISSVDLIFDVMSFMQQLPEACG-GPFEVVPNSMFMLSQPSKEARVICSANAPFNIEQANQPWLDICGFTEAEARGKTFKIIQGDETDFVKVADLMRSVQAKLPHSMLTVNYKKSGQPFLNFVRVFPIC----TGSEVTHFLSVIEEQQ 584          
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Match: A0A7S1D1F4_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D1F4_CYCTE)

HSP 1 Score: 177 bits (449), Expect = 2.890e-46
Identity = 114/345 (33.04%), Postives = 194/345 (56.23%), Query Frame = 1
Query:  364 TPESQSKAQQREMNRQHARNTRARKKQHLESLQSRIKSLEAEKTAKAEAKSGAAKELAKEQQTWHQALKTVLEFRTSGRIDEERWRTILSEE-FKFTLPITPYRSYNPTDLVNSR--RIVVGVDGMASDTASLMVMCENIAPKSIGKESPVNIEYLLSSSEHMFMGPSGLMSTFLLRTTDAVAKGAACELEQSGMIRAQFGNDGKLEEMDMMFDAIAWYQQLSKATRVESFPVIPNSLAEAYKLEKENVVITTAQQPFIIQHINKAWTNLCGYTLDECEGKP-LSILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFRNHLQCYPLADDPKTGEITSF 1386
            TPE + KA  R+ NR+HARNTR RKK +LE L+S +  L  E+      ++GAA  + +   T  + L +    R++     + W +IL E  F   +P+TPYRS+  +++  S+  R ++G+DGM SDTASL V+  ++  +S    + +   Y L + + +  G + +M+ +++ T +A   GA  E+ + GM+  +F +  K+  +++MFD +A+  QL +A   E+F V+PN++    +     +V+T A++P+ I  +NK W ++ G+  ++  GK    IL+  +TD SAVE L   +     ASA L + +++G  FRN+L  YPL+ D K     S 
Sbjct:   10 TPEEKVKAN-RDRNREHARNTRLRKKAYLEKLKSTVDELCRERDTLVSERAGAASLMVEIHNTRTEVLMSFFALRSTYEKQRDLWSSILDESCFSCVMPVTPYRSFPASEVQVSKCQRTILGIDGMISDTASLHVLLNSLIDRSRYPAASIQFRYTLVTEDAVVAG-NQMMARWVMSTVNATQFGARMEVAKQGMLCCKFNSAHKIIGLELMFDVMAFMLQLKQAAGSETFSVVPNTVQTCQRSFSSPMVMTLAERPYTIVQVNKLWEDMTGFRAEDVVGKASCRILQGQETDRSAVEVLMSSVRFKRPASASLLNYTRAGKRFRNYLNVYPLSTDSKITHYVSL 352          
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Match: A0A6T9YEN6_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia arenysensis TaxID=697910 RepID=A0A6T9YEN6_9STRA)

HSP 1 Score: 179 bits (455), Expect = 5.550e-45
Identity = 116/352 (32.95%), Postives = 193/352 (54.83%), Query Frame = 1
Query:  364 TPESQSKAQQREMNRQHARNTRARKKQHLESLQSRIKSLEAEKTAKAEAKSGAAKELAKEQQTWHQALKTVLEFRTSGRIDEERWRTILSEE-FKFTLPITPYRSYNPTDLVNSR--RIVVGVDGMASDTASLMVMCENIAPKSIGKESPVNIEYLLSSSEHMFMGPSGLMSTFLLRTTDAVAKGAACELEQSGMIRAQFGNDGKLEEMDMMFDAIAWYQQLSKATRVESFPVIPNSLAEAYKLEKENVVITTAQQPFIIQHINKAWTNLCGYTLDECEGKPLS-ILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFRNHLQCYPLADDPKTGEITSFAIIMSAL 1407
            TPE + KA  R+ NR+HARNTR RKK +LE+L+S +  L  E+      ++GAA  L +   T  + L +    R++       W +IL E  F   LP+TPYRS+  +++  S+  R ++G+DGM SDTASL V+   +  +S    + +   Y L + E +  G + +M+ ++++T +A   GA  E+ + GM+  +F +  K+  +++MFD +A   QL +A   E+F VIPN++    +     +V+  A +P+ I  +NK W ++ GY  +E  G+  S +L+ +QTD++AVE     +      SA++ H  KSG  F+N    YPL+ D +      F   + A+
Sbjct:  426 TPEERQKAN-RDRNREHARNTRLRKKAYLETLKSTVNDLCQERDTLVTERAGAASILVEMNNTRTEVLMSFFALRSANEKRRPLWASILDESSFTCVLPVTPYRSFPASEVQVSKCQRTILGIDGMMSDTASLHVLLNTLVDRSRFPTAAIQFRYTLVTEEAVVAG-NQMMARWVMQTLNATKCGARMEVSKQGMLCCKFNSAHKIVGLELMFDVMALMLQLKQAAGSETFSVIPNTVQTCQRSFDSPMVMILADEPYTIVQVNKLWEDMSGYKAEEVVGRTSSRVLEGSQTDANAVEVFMDEIRFKRPTSAMILHYKKSGQQFKNFFTAYPLSTDSRITHYLMFTSHVGAV 775          
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Match: A0A7S1FMY8_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FMY8_9STRA)

HSP 1 Score: 171 bits (432), Expect = 3.350e-43
Identity = 108/332 (32.53%), Postives = 186/332 (56.02%), Query Frame = 1
Query:  382 KAQQREMNRQHARNTRARKKQHLESLQSRIKSLEAEKTAKAEAKSGAAKELAKEQQTWHQALKTVLEFRTSGRIDEERWRTILSEE-FKFTLPITPYRSYNPTDLVNSR--RIVVGVDGMASDTASLMVMCENIAPKSIGKESPVNIEYLLSSSEHMFMGPSGLMSTFLLRTTDAVAKGAACELEQSGMIRAQFGNDGKLEEMDMMFDAIAWYQQLSKATRVESFPVIPNSLAEAYKLEKENVVITTAQQPFIIQHINKAWTNLCGYTLDECEGKP-LSILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFRNHLQCYPLADDPK 1365
            K Q R+ NR+HARNTR RKK +LE L   + +L  EK  K   K G   +  +   T  Q L +    R+S     + W  IL E  F   LP+TPYRS+  +++  S+  R ++G+DG+ +DTASL V+ +++  ++   +  +   Y + + + + M  + +M+ F+L T +AV  GA  EL + GM+  +F +  K+  +++MFD +++  QL  AT  ++F V+PN++    +  +E +V+T A++P+ I  +N+ W  + GY+ D+  GK  L IL+   T+   +  L   +     AS++L + +K G  FR ++Q +PL+ D K
Sbjct:  193 KQQHRDRNREHARNTRIRKKAYLEKLTDTVDTLGREKEEKEXXKRGRESQRLETTSTCMQVLMSFFALRSSYERRRDLWSLILDESCFYCVLPVTPYRSFLASEVQVSKCQRTIMGIDGIINDTASLHVLVDSLVDRAKHIDGKIKFSYTIVTDDTV-MVDTQVMARFILSTNNAVEMGAKQELRKQGMLYCKFNSQHKIVGIELMFDVMSFMLQLKTATGTDAFDVVPNTVQTCQRPFQEPMVMTFAERPYTIVQVNRKWELMTGYSADDVCGKAGLQILQGDDTEQDKLYLLMESIRYKRPASSLLTNCTKQGQKFRQYIQMFPLSHDSK 523          
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Match: A0A1E7FCK8_9STRA (BZIP domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FCK8_9STRA)

HSP 1 Score: 172 bits (435), Expect = 7.380e-43
Identity = 119/373 (31.90%), Postives = 195/373 (52.28%), Query Frame = 1
Query:  364 TPESQSKAQQREMNRQHARNTRARKKQHLESLQSRIKSLEAEKTAKAEAKSGAAKELAKEQQTWHQALKTVLEFRTSGRIDEERWRTILSEE-FKFTLPITPYRSYNPTDLVNSR--RIVVGVDGMASDTASLMVMCENIAPKSIGKESPVNIEYLLSSSEHMFMGPSGLMSTFLLRTTDAVAKGAACELEQSGMIRAQFGNDGKLEEMDMMFDAIAWYQQLSKATRVESFPVIPNSLAEAYKLEKENVVITTAQQPFIIQHINKAWTNLCGYTLDECEGKP-LSILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFRNHLQCYPLADDPKTGE---ITSFAIIMSALQQASS*ANKTALQDMADQ 1461
            TPE + +A  R+ NR+HARNTR RKK +LE+L+  +  L  E+      ++GAA  L +   T  + L +    R++     + W +IL E  F   LP+TPYRS+  +++  S+  R ++G+DGM SDTASL V+   +  +S    + +   Y L + E +  G + +M+ ++++T +A   GA  E+ + GM+  +F +  K+  +++MFD +A   QL +A   E+F VIPN++    +     +V+  A +P  I  +NK W ++ GY  DE  G+     L+  QTD++A E     +      SA+  H  KSG  F+N    YPL+ D +       TS   ++S     SS   +T + D   Q
Sbjct:  199 TPEERQRAN-RDRNREHARNTRLRKKAYLETLKCTVNELCQERDTLVTERAGAASILVEMNNTRTEVLMSFFALRSANEKRRQLWASILDESSFACILPVTPYRSFPASEVQVSKCQRTILGIDGMMSDTASLHVLLNTLVDRSRFPNASIAFRYTLVTEEAVVAG-NQMMARWVMQTLNATQCGARTEVSKQGMLCCKFNSAHKIVGLELMFDVMALMLQLKQAAGSETFSVIPNTVQTCQRSFDTPMVMILADEPHTIVQVNKLWEDMSGYKADEVVGRSSCRTLEGEQTDANAAEVFMDEIRFKRPTSAMSIHYKKSGERFKNFFLAYPLSTDSRITHYLIFTSHVGVVSDGSDVSSSITETTVSDTQQQ 569          
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Match: A0A7S2A2E8_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A2E8_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.260e-41
Identity = 114/338 (33.73%), Postives = 188/338 (55.62%), Query Frame = 1
Query:  364 TPESQSKAQQREMNRQHARNTRARKKQHLESLQSRIKSLEAEKTAKAEAKSGAAKELAKEQQTWHQALKTVLEFRTSGRIDEERWRTILSEE-FKFTLPITPYRSYNPTDLVNSR--RIVVGVDGMASDTASLMVMCENIAPKSIGKESPVNIEYLLSSSEHMFMGPSGLMSTFLLRTTDAVAKGAACELEQSGMIRAQFGNDGKLEEMDMMFDAIAWYQQLSKATRVESFPVIPNSLAEAYKLEKENVVITTAQQPFIIQHINKAWTNLCGYTLDECEGKP-LSILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFRNHLQCYPLADDPK 1365
            TPE + KA  R+ NR+HARNTR RKK +LE L+  +  L  E+      + GAA  L +   T    L +    R++     E W +IL E  F   +P+TPYRS+  +++  S+  R ++G+DGM SDTASL V+  ++  +S    + V   Y L + + +  G + +M+ +++ T +A   GA  E+ + GM+  +F +  K+  +++MFD +A+  QL ++T  +SF V+PN++    +     +V+T A++P+ I  +NK W  + GY  ++  GK     L+  +T+   VE L   +     ASAVL + ++SG  FRN+L  YPL+ D K
Sbjct:  217 TPEEKLKAN-RDRNREHARNTRLRKKAYLEKLKVTVDELCRERDTLVSERVGAASLLIEMHSTRIDVLMSFFALRSACERRRELWASILDESCFACVMPVTPYRSFPSSEVQVSKCQRTILGIDGMMSDTASLHVLLNSLVDRSKYPNATVQFRYTLVTEDSVVAG-NQMMARWVMSTLNATECGARMEVSKQGMLCCKFNSAHKIIGLELMFDVMAFMLQLKQSTGSDSFSVVPNTVQTCQRPFDTPMVMTLAERPYTIVQVNKLWEEVTGYRAEDVVGKASCRELQGQETNRMDVENLMSSVRYKRPASAVLVNYTRSGRRFRNYLNVYPLSTDSK 552          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1016.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C6X3_9STRA7.030e-9948.36BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A6H5K0R4_9PHAE6.450e-8445.38PAS domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A836CN81_9STRA1.330e-5435.50BZIP domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2DLD9_9STRA6.430e-4932.43Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2B104_9STRA1.760e-4733.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S1D1F4_CYCTE2.890e-4633.04Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A6T9YEN6_9STRA5.550e-4532.95Hypothetical protein n=1 Tax=Pseudo-nitzschia aren... [more]
A0A7S1FMY8_9STRA3.350e-4332.53Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A1E7FCK8_9STRA7.380e-4331.90BZIP domain-containing protein n=1 Tax=Fragilariop... [more]
A0A7S2A2E8_9STRA1.260e-4133.73Hypothetical protein n=2 Tax=Ditylum brightwellii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1016contigC-australica_Contig_1016:7419..9553 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LMT6
PFAMsPAS_9
Model size1533
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons7
Evalue2.41e-85
EggNOG OGs2CY5M@1|root,2S26N@2759|Eukaryota
DescriptionPAS domain
Cds size1299
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1016.3.1prot_C-australica_Contig_1016.3.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1016 7545..9445 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586751.1651118-UTR-C-australica_Contig_1016:7418..75441682586751.1651118-UTR-C-australica_Contig_1016:7418..7544Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1016 7419..7544 +
1682586751.2431078-UTR-C-australica_Contig_1016:9445..95531682586751.2431078-UTR-C-australica_Contig_1016:9445..9553Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1016 9446..9553 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586751.1814616-CDS-C-australica_Contig_1016:7544..79101682586751.1814616-CDS-C-australica_Contig_1016:7544..7910Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 7545..7910 +
1682586751.1896708-CDS-C-australica_Contig_1016:7983..83401682586751.1896708-CDS-C-australica_Contig_1016:7983..8340Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 7984..8340 +
1682586751.1988456-CDS-C-australica_Contig_1016:8436..84931682586751.1988456-CDS-C-australica_Contig_1016:8436..8493Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 8437..8493 +
1682586751.2089477-CDS-C-australica_Contig_1016:8586..87811682586751.2089477-CDS-C-australica_Contig_1016:8586..8781Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 8587..8781 +
1682586751.2185118-CDS-C-australica_Contig_1016:8850..89641682586751.2185118-CDS-C-australica_Contig_1016:8850..8964Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 8851..8964 +
1682586751.2265155-CDS-C-australica_Contig_1016:9110..92601682586751.2265155-CDS-C-australica_Contig_1016:9110..9260Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 9111..9260 +
1682586751.2345786-CDS-C-australica_Contig_1016:9385..94451682586751.2345786-CDS-C-australica_Contig_1016:9385..9445Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 9386..9445 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1016.3.1

>prot_C-australica_Contig_1016.3.1 ID=prot_C-australica_Contig_1016.3.1|Name=mRNA_C-australica_Contig_1016.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=433bp
MSGPAGGPPPDMGMGYGQGYMDPNGGMTFPAQGYRQMQLLQQEQLQKRQR
LDDPNCFSGMAMGGMFPPGSMGGAGRAAQTPESQSKAQQREMNRQHARNT
RARKKQHLESLQSRIKSLEAEKTAKAEAKSGAAKELAKEQQTWHQALKTV
LEFRTSGRIDEERWRTILSEEFKFTLPITPYRSYNPTDLVNSRRIVVGVD
GMASDTASLMVMCENIAPKSIGKESPVNIEYLLSSSEHMFMGPSGLMSTF
LLRTTDAVAKGAACELEQSGMIRAQFGNDGKLEEMDMMFDAIAWYQQLSK
ATRVESFPVIPNSLAEAYKLEKENVVITTAQQPFIIQHINKAWTNLCGYT
LDECEGKPLSILKCTQTDSSAVEALHGRMENHLAASAVLDHQSKSGTVFR
NHLQCYPLADDPKTGEITSFAIIMSALQQASS*
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mRNA from alignment at C-australica_Contig_1016:7419..9553+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1016.3.1 ID=mRNA_C-australica_Contig_1016.3.1|Name=mRNA_C-australica_Contig_1016.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2135bp|location=Sequence derived from alignment at C-australica_Contig_1016:7419..9553+ (Chrysoparadoxa australica CS_1217)
CCCGGGAAACTAGAGGGTACCGTATATTTCTTCAGAAGGAACGAGGGTAA AAGGTTGGCCTGCGACACGCTGCTGCTGGGGGCAATTCCGCGGTTCAACA GCAGAGCCCCCCAACAAGCCCCCAAGATGTCCGGACCTGCAGGGGGTCCC CCACCTGACATGGGGATGGGCTATGGTCAGGGCTATATGGACCCCAATGG TGGCATGACCTTTCCTGCTCAGGGATACCGGCAGATGCAACTACTGCAGC AGGAGCAGCTCCAGAAAAGGCAGCGGCTAGATGACCCAAATTGCTTTTCT GGCATGGCAATGGGTGGTATGTTTCCTCCAGGGTCGATGGGAGGGGCCGG GCGAGCAGCGCAAACACCAGAGAGCCAGAGCAAGGCTCAGCAAAGGGAGA TGAACCGCCAGCATGCGCGAAACACCAGGGCCAGGAAGAAGCAGCACTTG GAAAGCCTCCAGTCACGCATCAAGAGCCTGGAGGCAGAGAAGGTGAGTTG CACGCTTTCTGACTTGATGCTTCGAAAGCTCTGCATCCCTTACCCCACCC CTTCCTACACGACAGACTGCAAAGGCTGAAGCGAAGTCAGGAGCAGCTAA GGAGTTAGCAAAGGAACAACAGACCTGGCACCAGGCTTTAAAAACTGTGC TCGAATTCCGAACCAGTGGCAGAATAGATGAGGAGCGCTGGAGAACCATC CTCTCGGAGGAGTTCAAGTTCACTCTTCCCATCACTCCATACCGCTCCTA CAACCCTACGGACCTGGTCAACTCACGCCGTATAGTAGTTGGTGTGGATG GGATGGCATCTGACACAGCCTCCCTTATGGTGATGTGCGAGAACATTGCA CCAAAGTCAATTGGCAAGGAGTCTCCTGTCAACATTGAGTACTTGCTGAG CAGTTCTGAACACATGTTTATGGTAAGTTTGCTGTGAAGGCACCATAACC TGACTTGCTCAAGTCCTTTAGTTGACATACATCACTCAGCTCTTTGCCTC CTTACTCCCTCTACTCAGGGACCAAGTGGTCTTATGTCTACTTTCTTACT CCGCACCACTGATGCTGTGGCCAAGGTGATGCAACTGACTTAAATACTTA ACTACCCTTTGCACCATTGTGATTGCAGTCATACTTAAAAGGCCAGGCAT TGCTTTTGTCCTTAACAGGGCGCTGCCTGTGAGCTAGAGCAGTCTGGTAT GATCCGTGCTCAGTTTGGCAACGATGGCAAGCTGGAGGAGATGGATATGA TGTTTGATGCCATTGCCTGGTACCAACAGCTGAGTAAGGCCACACGTGTG GAATCTTTCCCTGTTATCCCCAACTCACTAGCCGAAGCATACAAGCTGGA GAAGGAAAATGTGGTAAGTGAGTAGATGGTTGTCTGGCTTGTATTTATTA ATCTAATGATAATACTACTCCTTTGGTTTCAGGTCATTACCACTGCCCAG CAACCATTCATCATCCAACACATCAACAAAGCCTGGACCAACCTCTGCGG TTATACCCTTGATGAGTGCGAAGGCAAGCCCCTCTCCATCCTCAAGGTAG TAGAACTGAGGTGCATTTGCCTATTTTGGCTAGGAAGCAGAAGGAAGAAA CGCTAAAGCAAAACATGCTCTAAATGCTTAGACGTGCCCAGTGCTCCGCC TCACAGCTGACTCGCCCACCATCACGTCATGTCACCGCACAGTGCACCCA GACAGACTCCTCTGCAGTAGAGGCCTTGCACGGTAGGATGGAGAACCACC TTGCTGCATCTGCTGTGCTAGATCACCAGTCCAAGTCAGGGACTGTCTTC CGAAACCACCTGCAGTGCTATCCTCTTGCAGATGATCCCAAGGTACTATA TGACATGCTCACTGATTCTCCTAACTACAGTGTTATCTGTTCATACATTA GGGCACAGCTTGAGAGTCGGCACCAGTTATGCACCTCCCCTGATTCACTC TGTCCTGCTCTCCGTAGACCGGAGAGATTACCAGCTTTGCAATAATCATG TCAGCGCTGCAACAAGCCTCAAGCTGAGCCAACAAGACTGCACTACAAGA CATGGCAGATCAAGCGAGGGAAAAGGTTTGAGGTTGTAAATACCAGCTAG GCAGCCTGCCAGCCAGCATCACTCAAAGAAAAGGA
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Coding sequence (CDS) from alignment at C-australica_Contig_1016:7419..9553+

>mRNA_C-australica_Contig_1016.3.1 ID=mRNA_C-australica_Contig_1016.3.1|Name=mRNA_C-australica_Contig_1016.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1299bp|location=Sequence derived from alignment at C-australica_Contig_1016:7419..9553+ (Chrysoparadoxa australica CS_1217)
ATGTCCGGACCTGCAGGGGGTCCCCCACCTGACATGGGGATGGGCTATGG
TCAGGGCTATATGGACCCCAATGGTGGCATGACCTTTCCTGCTCAGGGAT
ACCGGCAGATGCAACTACTGCAGCAGGAGCAGCTCCAGAAAAGGCAGCGG
CTAGATGACCCAAATTGCTTTTCTGGCATGGCAATGGGTGGTATGTTTCC
TCCAGGGTCGATGGGAGGGGCCGGGCGAGCAGCGCAAACACCAGAGAGCC
AGAGCAAGGCTCAGCAAAGGGAGATGAACCGCCAGCATGCGCGAAACACC
AGGGCCAGGAAGAAGCAGCACTTGGAAAGCCTCCAGTCACGCATCAAGAG
CCTGGAGGCAGAGAAGACTGCAAAGGCTGAAGCGAAGTCAGGAGCAGCTA
AGGAGTTAGCAAAGGAACAACAGACCTGGCACCAGGCTTTAAAAACTGTG
CTCGAATTCCGAACCAGTGGCAGAATAGATGAGGAGCGCTGGAGAACCAT
CCTCTCGGAGGAGTTCAAGTTCACTCTTCCCATCACTCCATACCGCTCCT
ACAACCCTACGGACCTGGTCAACTCACGCCGTATAGTAGTTGGTGTGGAT
GGGATGGCATCTGACACAGCCTCCCTTATGGTGATGTGCGAGAACATTGC
ACCAAAGTCAATTGGCAAGGAGTCTCCTGTCAACATTGAGTACTTGCTGA
GCAGTTCTGAACACATGTTTATGGGACCAAGTGGTCTTATGTCTACTTTC
TTACTCCGCACCACTGATGCTGTGGCCAAGGGCGCTGCCTGTGAGCTAGA
GCAGTCTGGTATGATCCGTGCTCAGTTTGGCAACGATGGCAAGCTGGAGG
AGATGGATATGATGTTTGATGCCATTGCCTGGTACCAACAGCTGAGTAAG
GCCACACGTGTGGAATCTTTCCCTGTTATCCCCAACTCACTAGCCGAAGC
ATACAAGCTGGAGAAGGAAAATGTGGTCATTACCACTGCCCAGCAACCAT
TCATCATCCAACACATCAACAAAGCCTGGACCAACCTCTGCGGTTATACC
CTTGATGAGTGCGAAGGCAAGCCCCTCTCCATCCTCAAGTGCACCCAGAC
AGACTCCTCTGCAGTAGAGGCCTTGCACGGTAGGATGGAGAACCACCTTG
CTGCATCTGCTGTGCTAGATCACCAGTCCAAGTCAGGGACTGTCTTCCGA
AACCACCTGCAGTGCTATCCTCTTGCAGATGATCCCAAGACCGGAGAGAT
TACCAGCTTTGCAATAATCATGTCAGCGCTGCAACAAGCCTCAAGCTGA
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