mRNA_C-australica_Contig_1016.2.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1016.2.1
Unique NamemRNA_C-australica_Contig_1016.2.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Match: A0A6U1QLD2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1QLD2_9STRA)

HSP 1 Score: 221 bits (562), Expect = 4.170e-66
Identity = 119/230 (51.74%), Postives = 160/230 (69.57%), Query Frame = 3
Query:   90 FVAGATGRTGQRVVNELVAVGAEVVAGVRDEQKAA-------------GMLGSASVKAVDWTNKEAIKSAMEGCDAVVCTLGASESEALDFRGPARVDGQMTQDLIAAAKELG-TIKHFTLVTSLGTAKFGMPASILNLFWGILTFKRKSELALVDSGLPYTIVRPGGMEKPEDDYDMAYDVVLRPADSTFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVASPK 737
            FVAGA+GRTGQRVV EL+  GA+V AG+R+   A              G+  S  +  +D  N+  I  A++ CDAVV  LGA E+EALD+  P RVDG +TQ+LI A+ E    +KHF +V+SLGT K G PAS+LNLFWG+LT+KR+SE  L  SG+PYTIVRPGGME+P+DD+++ +++ L+ AD+TFGG VSR QVAK+V+A +   + +ANK+IEV+ E  A  K
Sbjct:   63 FVAGASGRTGQRVVRELLQSGAKVKAGIRESSNAKAKEIFFNAEFMDQGLTDSLELYPIDLENQSQISEALKDCDAVVSALGALETEALDWTAPYRVDGTLTQNLIKASMEQKEAVKHFIMVSSLGTGKIGFPASVLNLFWGVLTWKRQSEKLLESSGIPYTIVRPGGMERPKDDFELTHNIKLQAADTTFGGNVSRLQVAKLVSAILQQPDTTANKIIEVVAETQAPKK 292          
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Match: A0A250X437_9CHLO (NAD(P)-bd_dom domain-containing protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250X437_9CHLO)

HSP 1 Score: 214 bits (544), Expect = 4.480e-64
Identity = 118/237 (49.79%), Postives = 157/237 (66.24%), Query Frame = 3
Query:   90 FVAGATGRTGQRVVNELVAVGAEVVAGVRDEQKAAGML--------------GSASVKAVDWTNKEAIKSAMEGCDAVVCTLGASESEALDFRGPARVDGQMTQDLIAAAKELGTIKHFTLVTSLGTAKFGMPASILNLFWGILTFKRKSELALVDSGLPYTIVRPGGMEKPEDDYDMAYDVVLRPADSTFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVASPKVLLHPSM 758
            FVAG+TGR G+R+  EL+  G  V AG R+  KA G +              G   V A D  + E+IK A+ G   VVC +GA E + LD  GP R+DG+ T +LI  A E  +++HF LVTSLGT KFG+PA +LNLFWG+LT+KRK+E AL  SG+PYTI+RPGGME+P+DDY   ++++ +  D+ FGG VSR QVA++VAAA+    L+ANKV+EV+ E  A PK L  PS+
Sbjct:   89 FVAGSTGRLGERICRELLRSGVRVRAGARNVDKARGNIKHWVASGSLRPSDAGRIEVVAFDLEDSESIKQALNGASRVVCAVGAPEDQVLDSTGPRRIDGEGTINLILTAAEARSVEHFVLVTSLGTGKFGLPAGLLNLFWGVLTWKRKAEEALEMSGMPYTIIRPGGMERPKDDYKNTHNLIFKEKDTAFGGQVSRLQVAELVAAAIQYPTLAANKVLEVVAETTA-PK-LPFPSL 323          
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Match: A0A6H5KIF4_9PHAE (MsrB domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIF4_9PHAE)

HSP 1 Score: 214 bits (544), Expect = 3.570e-63
Identity = 121/231 (52.38%), Postives = 158/231 (68.40%), Query Frame = 3
Query:   90 FVAGATGRTGQRVVNELVAVGAEVVAGVRDEQ----------KA---AGMLGSASVKAVDWTNKEAIKSAMEGCDAVVCTLGASESEALDFRGPARVDGQMTQDLIAAAKELGTIKHFTLVTSLGTAKFGMPASILNLFWGILTFKRKSELALVDSGLPYTIVR--PGGMEKPEDDYDMAYDVVLRPADSTFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVASPK 737
            FVAGATGR G+RVV EL+  G EV A VR +           KA    G+     V  VD  ++  +  AME   +VVC LGASESE  + +GP +VDG+++Q L+ AAKE  ++KHF LVT+LGT KFG PAS LNLFWGIL++KRK+E AL+DSG+PYTI+R  PGGMEKP DD++  ++V +   D+ FGG+VSR QVAK+ AAAV   + S NKV+EV+ E++A  K
Sbjct:  101 FVAGATGRLGKRVVRELLLDGMEVTAAVRPDSLPKANTLFADKAFMPEGLSSKLEVVGVDPESEFELSKAMEKSQSVVCALGASESEPFNVKGPYQVDGKLSQKLVLAAKETPSVKHFILVTALGTGKFGWPASALNLFWGILSWKRKTEKALIDSGIPYTIIRRAPGGMEKPGDDFEQTHNVRVASKDTLFGGVVSRLQVAKLAAAAVVAPDSSTNKVMEVVAEDLAPKK 331          
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Match: E1Z393_CHLVA (NAD(P)-bd_dom domain-containing protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z393_CHLVA)

HSP 1 Score: 193 bits (490), Expect = 5.430e-58
Identity = 117/224 (52.23%), Postives = 140/224 (62.50%), Query Frame = 3
Query:   78 NPKTFVAGATGRTGQRVVNELVAVGAEVVAGVRDEQKAAGMLGSASVKAVDWTNKEAI-------KSAMEGCDAVVCTLGASESEALDFRGPARVDGQMTQDLIAAAKELGTIKHFTLVTSLGTAKFGMPASILNLFWGILTFKRKSELALVDSGLPYTIVRPGGMEKPEDDYDMAYDVVLRPADSTFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVA 728
             P  FVAGATGR G R+V EL+  G +V AGVR  +KA   L  AS  +    +KE +         AM G   VVC +GASESE  D   P R+DG     L+ AA   G +  F LVTSLGT K G PA +LNLF G+L FKRK+E AL  SGLPY IVRPGGME+P DDY + ++V L   D  FGG VSR QVA++VAAAV N EL+ NKV+EV+ E  A
Sbjct:    1 TPTVFVAGATGRLGARIVRELLGQGFKVRAGVRSAEKAENFLSIAS--SYGLLSKEELGRLQVRRSPAMYGAH-VVCAVGASESELGDLSAPRRIDGDGATRLVQAATTAG-VDQFVLVTSLGTGKIGFPAGVLNLFGGVLVFKRKAEEALEASGLPYVIVRPGGMERPRDDYKLTHNVKLATRDKLFGGQVSRLQVAELVAAAVANPELAENKVLEVVAETAA 220          
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Match: A0A7I4A1T1_PHYPA (NAD(P)-bd_dom domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4A1T1_PHYPA)

HSP 1 Score: 194 bits (493), Expect = 3.020e-57
Identity = 111/227 (48.90%), Postives = 145/227 (63.88%), Query Frame = 3
Query:   78 NPKTFVAGATGRTGQRVVNELVAVGAEVVAGVRDEQKAAGMLGSASVKAVDWTNK----------EAIKSAMEGCDAVVCTLGASESEALDFRGPARVDGQMTQDLIAAAKELGTIKHFTLVTSLGTAKFGMPASILNLFWGILTFKRKSELALVDSGLPYTIVRPGGMEKPEDDYDMAYDVVLRPADSTFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVA 728
            N   FVAGATG+ G R V EL+  G +V AGVRD  +     G A +KA D +            +AI+S +     VVCT+GASE E  D  GP R+D + T++LI AA     + HF LV+SLGT KFG PASILNLFWG+L +K K+E AL +SGL YTIVRPGGME+P D Y   ++++L P D+  GG VS  Q+A+++AA V+N +L+ NKV+E I E  A
Sbjct:   88 NNVVFVAGATGKVGSRTVRELLKSGVQVRAGVRDVSR-----GQAVLKATDKSESLEFVKCDLENDAIESCLGDAGVVVCTIGASEKEISDVTGPYRIDYKATENLIKAATS-AKVNHFILVSSLGTTKFGWPASILNLFWGVLIWKAKAEKALEESGLSYTIVRPGGMERPTDAYKETHNLILAPKDTYSGGQVSSLQIAELIAACVSNLDLAGNKVLEAIAETTA 308          
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Match: D7G4L2_ECTSI (MsrB domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4L2_ECTSI)

HSP 1 Score: 194 bits (493), Expect = 9.100e-57
Identity = 98/181 (54.14%), Postives = 133/181 (73.48%), Query Frame = 3
Query:  195 GMLGSASVKAVDWTNKEAIKSAMEGCDAVVCTLGASESEALDFRGPARVDGQMTQDLIAAAKELGTIKHFTLVTSLGTAKFGMPASILNLFWGILTFKRKSELALVDSGLPYTIVRPGGMEKPEDDYDMAYDVVLRPADSTFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVASPK 737
            G+     V  VD  ++  +  AM+   +VVC LGASESE  + +GP +VDG+++Q L+ AAKE  ++KHF LVT+LGT KFG PAS LNLFWGIL++KRK+E AL+DSG+PYTI+RPGGMEKP DD++  ++V +   D+ FGG+VSR QVAK+ AAAV   + S NKV+EV+ E++A  K
Sbjct:   40 GLSSKLEVVGVDPESEFELSKAMDKSQSVVCALGASESEPFNVKGPYQVDGKLSQKLVLAAKETPSVKHFVLVTALGTGKFGWPASALNLFWGILSWKRKTEKALIDSGIPYTILRPGGMEKPGDDFEQTHNVRVASKDTLFGGVVSRLQVAKLAAAAVVAPDSSTNKVMEVVAEDLAPKK 220          
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Match: D8RQE1_SELML (NAD(P)-bd_dom domain-containing protein n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8RQE1_SELML)

HSP 1 Score: 193 bits (490), Expect = 1.250e-56
Identity = 111/231 (48.05%), Postives = 143/231 (61.90%), Query Frame = 3
Query:   90 FVAGATGRTGQRVVNELVAVGAEVVAGVRDEQKAAGMLGSA------------------SVKAVDWTNKEAIKSAMEGCDAVVCTLGASESEALDFRGPARVDGQMTQDLIAAAKELGTIKHFTLVTSLGTAKFGMPASILNLFWGILTFKRKSELALVDSGLPYTIVRPGGMEKPEDDYDMAYDVVLRPADSTFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVA 728
            FVAGATG  G R V ELV  G  V AGVR   KA  +LG +                   +   D    + I+SA+     V+C +GASE E LD  GP R+D + T++LIAAAK    +KHF LVTSLGT KFG+PAS+LNLFWG+L +K K+E AL+DSGL YTIVRPGGME+P D +   +++ L P D+  GG VSR QVA+++A    N EL+ +K++E I E  A
Sbjct:   59 FVAGATGNVGSRTVKELVKSGLRVRAGVRSIDKAESILGVSISYHVCRNEKNYIKDDQLEIIDCDLEKPDEIESALGNSGVVICAIGASEKEVLDVTGPYRIDYEATKNLIAAAKN-AEVKHFILVTSLGTTKFGLPASVLNLFWGVLIWKAKAEKALIDSGLAYTIVRPGGMERPTDAFKETHNLRLAPKDTFTGGQVSRLQVAELLACIANNLELAEDKILEAIAETSA 288          
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Match: A0A072UX22_MEDTR (NAD-dependent epimerase/dehydratase family protein n=3 Tax=Medicago truncatula TaxID=3880 RepID=A0A072UX22_MEDTR)

HSP 1 Score: 198 bits (503), Expect = 9.160e-56
Identity = 113/231 (48.92%), Postives = 145/231 (62.77%), Query Frame = 3
Query:   90 FVAGATGRTGQRVVNELVAVGAEVVAGVRDEQKAAGMLGSASVKAVDWTN------------------KEAIKSAMEGCDAVVCTLGASESEALDFRGPARVDGQMTQDLIAAAKELGTIKHFTLVTSLGTAKFGMPASILNLFWGILTFKRKSELALVDSGLPYTIVRPGGMEKPEDDYDMAYDVVLRPADSTFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVA 728
            FVAGATG+ G R V EL+ +G +V AGVR  Q+A  ++ S     +D T+                   E IKSA+     V+CT+GASE E  D  GP R+D   T++L+ AA  +  + HF LVTSLGT KFG PA+ILNLFWG+L +KRK+E AL+ SGLPYTIVRPGGME+P D Y   ++V L   D+ FGG VS  QVA+++AA   N ELS  K++EVI E  A
Sbjct:   85 FVAGATGKVGSRTVRELIKLGFKVRAGVRSAQRAGSLVQSVKQLKLDGTSGGSEAVEKLEIVECDLEKPEQIKSALGNASTVICTIGASEKEIFDITGPYRIDYMATKNLVDAAS-VAKVNHFILVTSLGTNKFGFPAAILNLFWGVLCWKRKAEEALLASGLPYTIVRPGGMERPTDAYKETHNVTLSTEDTLFGGQVSNLQVAELMAAMAKNPELSYCKIVEVIAETTA 314          
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Match: A0A8B8LH06_ABRPR (protein TIC 62, chloroplastic isoform X2 n=2 Tax=Abrus precatorius TaxID=3816 RepID=A0A8B8LH06_ABRPR)

HSP 1 Score: 194 bits (494), Expect = 2.920e-55
Identity = 112/246 (45.53%), Postives = 150/246 (60.98%), Query Frame = 3
Query:   69 EGLNPKT--------FVAGATGRTGQRVVNELVAVGAEVVAGVRDEQKAAGMLGSASVKAVDWTNK------------------EAIKSAMEGCDAVVCTLGASESEALDFRGPARVDGQMTQDLIAAAKELGTIKHFTLVTSLGTAKFGMPASILNLFWGILTFKRKSELALVDSGLPYTIVRPGGMEKPEDDYDMAYDVVLRPADSTFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVA 728
            EG+  KT        FVAGATGR G R V EL+ +G  V AGVRD ++A  ++ S     +D T+                   + I SA+     V+C++GASE E  D  GP R+D Q T++LI AA  +  + HF LVTSLGT K G PA+ILNLFWG+L +KRK+E AL+ SG+PYTIVRPGGME+P D +   +++ L   D+ FGGLVS  Q+A+++A    N ELS  K++EVI E +A
Sbjct:   74 EGIPEKTNSKDDNLVFVAGATGRVGSRTVRELIKLGFRVRAGVRDAERAGALVKSVEQLKLDGTSASGETVEKLEIVECDLEKPDQIVSALGNASTVICSIGASEKEVFDITGPFRIDYQATKNLIDAAT-VAKVNHFILVTSLGTNKIGFPAAILNLFWGVLIWKRKAEEALLASGIPYTIVRPGGMERPTDAFKETHNITLSTEDTLFGGLVSNLQIAELMAVMAKNRELSYCKIVEVIAETIA 318          
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Match: D8TIU4_VOLCA (NAD(P)-bd_dom domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TIU4_VOLCA)

HSP 1 Score: 190 bits (482), Expect = 4.110e-55
Identity = 114/230 (49.57%), Postives = 146/230 (63.48%), Query Frame = 3
Query:   90 FVAGATGRTGQRVVNELVAVGAEVVAGVRDEQKAAGMLGSAS---------VKAV-----DWTNKEAIKSAMEGCDAVVCTLGASESEALDFRGPARVDGQMTQDLIAAAKELGTIKHFTLVTSLGTAKFGMPASILNLFWGILTFKRKSELALVDSGLPYTIVRPGGMEKPEDDYDMAYDVVLRPADSTFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVASPK 737
            FVAGATGRTG RVV EL+  G  V AG R+ + A   L  A+         VK V     D  N E   +A+   + VVC +GA E +AL+F  P +VDG+ +  LI  A ELG +  F LVTSLGT K G PA +LNLF G+L +KR++E AL  SG+ YTIVRPGGME+P DDY   +++VL+P DSTFGG VSR QVA++VAA   N   + NKV+E++ E  A P+
Sbjct:   98 FVAGATGRTGARVVRELLESGFTVRAGARNVEAAESALSVAASYGIIKADQVKRVTVVPFDVGNVEGFAAAIGNANKVVCAVGAPEDQALNFSAPKKVDGEGSVALINKAAELG-VTQFVLVTSLGTGKLGWPAGVLNLFGGVLLWKREAEKALEASGMAYTIVRPGGMERPTDDYKKTHNLVLKPRDSTFGGQVSRLQVAELVAATCRNPAAAENKVLELVAETTAPPR 326          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1016.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6U1QLD2_9STRA4.170e-6651.74Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A250X437_9CHLO4.480e-6449.79NAD(P)-bd_dom domain-containing protein n=1 Tax=Ch... [more]
A0A6H5KIF4_9PHAE3.570e-6352.38MsrB domain-containing protein n=1 Tax=Ectocarpus ... [more]
E1Z393_CHLVA5.430e-5852.23NAD(P)-bd_dom domain-containing protein (Fragment)... [more]
A0A7I4A1T1_PHYPA3.020e-5748.90NAD(P)-bd_dom domain-containing protein n=2 Tax=Ph... [more]
D7G4L2_ECTSI9.100e-5754.14MsrB domain-containing protein n=1 Tax=Ectocarpus ... [more]
D8RQE1_SELML1.250e-5648.05NAD(P)-bd_dom domain-containing protein n=2 Tax=Se... [more]
A0A072UX22_MEDTR9.160e-5648.92NAD-dependent epimerase/dehydratase family protein... [more]
A0A8B8LH06_ABRPR2.920e-5545.53protein TIC 62, chloroplastic isoform X2 n=2 Tax=A... [more]
D8TIU4_VOLCA4.110e-5549.57NAD(P)-bd_dom domain-containing protein n=1 Tax=Vo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1016contigC-australica_Contig_1016:5756..7309 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog88036.EFJ12254
PFAMsNAD_binding_10
Model size761
Max annot lvl35493|Streptophyta
Hectar predicted targeting categorysignal peptide
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0009507,GO:0009526,GO:0009534,GO:0009535,GO:0009536,GO:0009579,GO:0009941,GO:0016020,GO:0031967,GO:0031975,GO:0031976,GO:0031984,GO:0032991,GO:0034357,GO:0042651,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0055035,GO:0098796,GO:0098807
Exons6
Evalue2.23e-59
EggNOG OGsCOG0702@1|root,KOG1203@2759|Eukaryota,37KM2@33090|Viridiplantae,3GAWB@35493|Streptophyta
DescriptionProtein TIC 62, chloroplastic
Cds size750
COG categoryG
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1016.2.1prot_C-australica_Contig_1016.2.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1016 5756..7298 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586751.0711255-CDS-C-australica_Contig_1016:5755..58631682586751.0711255-CDS-C-australica_Contig_1016:5755..5863Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 5756..5863 -
1682586751.0836844-CDS-C-australica_Contig_1016:6111..61971682586751.0836844-CDS-C-australica_Contig_1016:6111..6197Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 6112..6197 -
1682586751.092879-CDS-C-australica_Contig_1016:6316..63831682586751.092879-CDS-C-australica_Contig_1016:6316..6383Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 6317..6383 -
1682586751.1055214-CDS-C-australica_Contig_1016:6508..66491682586751.1055214-CDS-C-australica_Contig_1016:6508..6649Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 6509..6649 -
1682586751.119956-CDS-C-australica_Contig_1016:6818..70691682586751.119956-CDS-C-australica_Contig_1016:6818..7069Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 6819..7069 -
1682586751.1291354-CDS-C-australica_Contig_1016:7201..72981682586751.1291354-CDS-C-australica_Contig_1016:7201..7298Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1016 7202..7298 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586751.1372862-UTR-C-australica_Contig_1016:7298..73091682586751.1372862-UTR-C-australica_Contig_1016:7298..7309Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1016 7299..7309 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1016.2.1

>prot_C-australica_Contig_1016.2.1 ID=prot_C-australica_Contig_1016.2.1|Name=mRNA_C-australica_Contig_1016.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=250bp
MRSIAVALLACLFYQCWLVEGLNPKTFVAGATGRTGQRVVNELVAVGAEV
VAGVRDEQKAAGMLGSASVKAVDWTNKEAIKSAMEGCDAVVCTLGASESE
ALDFRGPARVDGQMTQDLIAAAKELGTIKHFTLVTSLGTAKFGMPASILN
LFWGILTFKRKSELALVDSGLPYTIVRPGGMEKPEDDYDMAYDVVLRPAD
STFGGLVSRKQVAKVVAAAVTNTELSANKVIEVITEEVASPKVLLHPSM*
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mRNA from alignment at C-australica_Contig_1016:5756..7309-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1016.2.1 ID=mRNA_C-australica_Contig_1016.2.1|Name=mRNA_C-australica_Contig_1016.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=1554bp|location=Sequence derived from alignment at C-australica_Contig_1016:5756..7309- (Chrysoparadoxa australica CS_1217)
CGAGCGACGACATGCGTTCGATAGCGGTAGCACTACTTGCTTGCCTCTTT TACCAATGTTGGCTTGTCGAAGGGCTGAACCCAAAGACCTTTGTCGCTGG TGCCACAGGTGCGGTACATTTATTTCTCTACTCCGTTCACCCCCTACACC ATGCTCCCTATACACTTTACCTCTAACTCGCAGCGTCCCTGCCCTGCAAC CTTCTCACCTGCTCCTGGCGCCTTGCACATCTCCTCGTAGGTCGCACGGG ACAGCGTGTGGTAAACGAACTCGTAGCCGTCGGTGCTGAGGTTGTTGCAG GAGTACGCGACGAACAAAAAGCGGCTGGTATGCTTGGCTCGGCAAGCGTT AAAGCTGTTGACTGGACCAATAAAGAAGCCATCAAGTCTGCCATGGAGGG TTGTGACGCCGTGGTTTGCACGCTAGGTGCCTCCGAGTCAGAAGCACTTG ACTTCAGAGGGCCTGCTCGAGTAGATGGCCAGATGACACAGGTAAAGTAG CTTGTCTCTGCTTTGAGCGCAAGCCTTGCCCTTGGCTAGAGAATAGAGAA ATCCTGGTCCTGATTAGTTATGTCAAGGAAGTCAAGGAACAGCGCCAATG CTCGTCACCTGCCTATTGATCCATCCAACTGCCTCTTGATCAAACTCTCT ATAATCTCAGGACCTCATTGCAGCAGCAAAGGAGCTAGGCACAATCAAGC ACTTCACTCTAGTCACCTCTCTTGGGACTGCCAAATTTGGAATGCCAGCT TCAATATTGAACCTCTTCTGGGGAATTCTGACCTTCAAGCGGAAATCTGA GGTACTTACTCGCGTATTCGCTATTGAAGGAGAGAAAGGCGCGCTATTTA CCATATCATCTCACCTATTCTGCACCTCTTCTGCTTATCTTTGTTTCTTT TCTCGCCTCATCTCCAATCCCACTAGTTGGCTCTAGTGGACAGTGGTCTA CCGTACACTATTGTGCGGCCTGGTGGGATGGAGAAACCCGAAGGTCACAC ACATCATGCTAGCCCCAGCTCCGCCATAACATTTTCACTTGAGCAGCAGG TGTGGCTGAGGCAGAGGCTGTGGCTGCAGCTACAGCTGACTCTTCCACTC TGCTCATTACAGATGACTATGACATGGCCTATGATGTGGTCCTAAGGCCA GCAGACTCCACGTTTGGTGGGCTGGTGTCGAGGAAGCAAGTTGCTAAGGT GAGCTAGGGCTGGTGCTTTTGCCAACAAAAGAAAGAACCATTAGGGCCGG GCAGTCATTGGTGAGAATGCGCCAAGAGAGACTGGATGCTTCATCGTAGC TGATAGCTTTACTGAGCTTTTGCACAACTTGATAGGGGTTAGGACTGGGC ATATAGTTCCTAGGTTTGGAGTTGCTCTTATCCTTGCTGCCCTTACACAT CACATATGGCACACGCGCCCGTGGCATACTCTCCTTATCATTGCAGGTGG TTGCTGCAGCTGTCACCAATACCGAACTCTCGGCCAACAAAGTTATTGAG GTTATTACCGAAGAAGTTGCATCACCTAAGGTATTACTGCATCCATCCAT GTAG
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Coding sequence (CDS) from alignment at C-australica_Contig_1016:5756..7309-

>mRNA_C-australica_Contig_1016.2.1 ID=mRNA_C-australica_Contig_1016.2.1|Name=mRNA_C-australica_Contig_1016.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=750bp|location=Sequence derived from alignment at C-australica_Contig_1016:5756..7309- (Chrysoparadoxa australica CS_1217)
ATGCGTTCGATAGCGGTAGCACTACTTGCTTGCCTCTTTTACCAATGTTG
GCTTGTCGAAGGGCTGAACCCAAAGACCTTTGTCGCTGGTGCCACAGGTC
GCACGGGACAGCGTGTGGTAAACGAACTCGTAGCCGTCGGTGCTGAGGTT
GTTGCAGGAGTACGCGACGAACAAAAAGCGGCTGGTATGCTTGGCTCGGC
AAGCGTTAAAGCTGTTGACTGGACCAATAAAGAAGCCATCAAGTCTGCCA
TGGAGGGTTGTGACGCCGTGGTTTGCACGCTAGGTGCCTCCGAGTCAGAA
GCACTTGACTTCAGAGGGCCTGCTCGAGTAGATGGCCAGATGACACAGGA
CCTCATTGCAGCAGCAAAGGAGCTAGGCACAATCAAGCACTTCACTCTAG
TCACCTCTCTTGGGACTGCCAAATTTGGAATGCCAGCTTCAATATTGAAC
CTCTTCTGGGGAATTCTGACCTTCAAGCGGAAATCTGAGTTGGCTCTAGT
GGACAGTGGTCTACCGTACACTATTGTGCGGCCTGGTGGGATGGAGAAAC
CCGAAGATGACTATGACATGGCCTATGATGTGGTCCTAAGGCCAGCAGAC
TCCACGTTTGGTGGGCTGGTGTCGAGGAAGCAAGTTGCTAAGGTGGTTGC
TGCAGCTGTCACCAATACCGAACTCTCGGCCAACAAAGTTATTGAGGTTA
TTACCGAAGAAGTTGCATCACCTAAGGTATTACTGCATCCATCCATGTAG
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