Homology
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Match:
A0A2E3XQB5_9PROT (tRNA dimethylallyltransferase n=1 Tax=Halobacteriovoraceae bacterium TaxID=2026745 RepID=A0A2E3XQB5_9PROT)
HSP 1 Score: 196 bits (498), Expect = 2.250e-58
Identity = 107/220 (48.64%), Postives = 147/220 (66.82%), Query Frame = 1
Query: 1 YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENLHENDHYRNRRALEFYYTTGKKFSDSKKDKEEEGPYDFSRPFKADWKIHHAYLSLPKDQHWKIMDLRVAKMLKDGLLEEVESLLLKGFNPDLKPLQSIGYKECIDLINFLKTGQAEKDKPTDLVSLRERIYINTRRLAKSQKTFFKKIEPKITYNSLKDKELIVQDCLHFL 660
Y+RALIKG+YEG + + VQKI E+G+ IRD LK D +S+ +LHEND YRN RA E+ T S+ K ++ PYDFS+ DW IHH YL LPK++HW +M LR KM+ DGL++EV+++L +G + + KPLQSIGYKE I+ I + D+ +L E+IYI TR+LAKSQKTFFKKI+PK Y+ LKD++ I+Q+ + F+
Sbjct: 110 YIRALIKGMYEGTTISEQTKIDVQKILEEKGFSYIRDQLKERDYQSYIDLHENDEYRNIRAFEYLLQTASPISEQKNKIDD--PYDFSKNQFPDWNIHHIYLELPKEEHWPLMKLRTEKMITDGLIDEVKTILEQGISENEKPLQSIGYKETIEYI---------RSSSNDIPALIEKIYIATRQLAKSQKTFFKKIKPKYNYHPLKDRDRILQEAISFI 318
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Match:
T0SSI4_9PROT (tRNA dimethylallyltransferase n=1 Tax=Bacteriovorax sp. BSW11_IV TaxID=1353529 RepID=T0SSI4_9PROT)
HSP 1 Score: 189 bits (480), Expect = 1.020e-55
Identity = 105/220 (47.73%), Postives = 139/220 (63.18%), Query Frame = 1
Query: 1 YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENLHENDHYRNRRALEFYYTTGKKFSDSKKDKEEEGPYDFSRPFKADWKIHHAYLSLPKDQHWKIMDLRVAKMLKDGLLEEVESLLLKGFNPDLKPLQSIGYKECIDLINFLKTGQAEKDKPTDLVSLRERIYINTRRLAKSQKTFFKKIEPKITYNSLKDKELIVQDCLHFL 660
Y+RAL+KG+YE ++ + V K+ E G + I LK HDP+S +NLH NDHYR RA+E + TG SD K+ ++E PYDFS DW I H YL LPK++HWKI+ R KM DGLL EV+ LL GF + +PLQSIGYKE +D I + + L ER+ I+TR+LAKSQ+TFFKKI+PK T++ L+DKE I Q L ++
Sbjct: 108 YLRALVKGMYESVGASQEIKDDVDKLYKENGIDAIISYLKEHDPKSLDNLHVNDHYRLVRAVEHHKMTGTPISDQKEKMDKEDPYDFSNNAHPDWDILHLYLDLPKEEHWKIIQKRSQKMFDDGLLGEVKDLLESGFTGEERPLQSIGYKESLDFIRGIHSN---------LEDCLERLNISTRQLAKSQRTFFKKIQPKETFHPLRDKEKIAQRVLAYI 318
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Match:
A0A496XQ13_9PROT (tRNA dimethylallyltransferase n=1 Tax=Epsilonproteobacteria bacterium TaxID=2026809 RepID=A0A496XQ13_9PROT)
HSP 1 Score: 187 bits (474), Expect = 1.180e-54
Identity = 107/224 (47.77%), Postives = 146/224 (65.18%), Query Frame = 1
Query: 1 YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENLHENDHYRNRRALEFYYTTGKKFSDSKKDKEEEGPYDFSRPFKADWKIHHAYLSLPKDQHWKIMDLRVAKMLKDGLLEEVESLLLKGFNPDLKPLQSIGYKECIDLINFLKTGQAEKDKPTDLVSLRERIYINTRRLAKSQKTFFKKIEPKITYNSLKDKELIVQDCLHFLAPYT 672
Y+RALIKG+YE +++ + + K+ EG I ++LK +DPES LH NDHYR RA EF+ TG+K SD KK+ +++ PYD S +DW I H YL PK +H KI++ R +M+K+GL+EEV LL KGF+ + +PL+SIGYKE I I E + PT + SL ERI I+TR+LAKSQ+TFFKKI PK TYN L+ E +++D FL +
Sbjct: 119 YLRALIKGMYEAQTTPDEIKDSLDKMYKAEGITPIVEILKENDPESLSQLHINDHYRLIRAAEFFLATGEKISDEKKNMDKKSPYDLST---SDWNIFHIYLDPPKVEHLKIIEKRTTQMIKEGLVEEVTELLNKGFSGNERPLKSIGYKEAISFI--------EGNLPT-IESLTERIVISTRQLAKSQRTFFKKIMPKNTYNPLEGDEKVIEDVTEFLKQHN 330
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Match:
A0A523J9N4_9DELT (tRNA dimethylallyltransferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A523J9N4_9DELT)
HSP 1 Score: 178 bits (451), Expect = 2.660e-51
Identity = 107/220 (48.64%), Postives = 146/220 (66.36%), Query Frame = 1
Query: 1 YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENLHENDHYRNRRALEFYYTTGKKFSDSKKDKEEEGPYDFSRPFKADWKIHHAYLSLPKDQHWKIMDLRVAKMLKDGLLEEVESLLLKGFNPDLKPLQSIGYKECIDLINFLKTGQAEKDKPTDLVSLRERIYINTRRLAKSQKTFFKKIEPKITYNSLKDKELIVQDCLHFL 660
Y+RALIKG+YE E++ + ++++++ E+G I ++L+ DPES LH NDHYR RA EF+ TTG+K S KK +E+ PYD + +W I H YL+ PKD H KI++ R +M++ GL++EV LL GF + KPL SIGYKE NFLK G+ + D+ SL ERI I+TR+LAKSQ+TFFKKI PK TY+ LKD+E I +D FL
Sbjct: 111 YLRALIKGMYETETTPKNIKKELEELYKEQGIGPIVEILREKDPESLSQLHLNDHYRLIRAAEFFLTTGEKISIEKKKMDEKNPYDLTSD---EWNIFHIYLNPPKDIHQKIIEKRTREMIELGLIDEVSELLKNGFTGEEKPLNSIGYKEAQ---NFLK-GELK-----DMESLIERIIISTRQLAKSQRTFFKKITPKNTYDPLKDEEKIEKDVADFL 318
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Match:
A0A2D5YLU6_9PROT (tRNA dimethylallyltransferase n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2D5YLU6_9PROT)
HSP 1 Score: 177 bits (448), Expect = 6.720e-51
Identity = 100/220 (45.45%), Postives = 143/220 (65.00%), Query Frame = 1
Query: 1 YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENLHENDHYRNRRALEFYYTTGKKFSDSKKDKEEEGPYDFSRPFKADWKIHHAYLSLPKDQHWKIMDLRVAKMLKDGLLEEVESLLLKGFNPDLKPLQSIGYKECIDLINFLKTGQAEKDKPTDLVSLRERIYINTRRLAKSQKTFFKKIEPKITYNSLKDKELIVQDCLHFL 660
Y+RAL+KG+YE E+ ++I + +G +I + LK +DPES +NLHENDHYR RA E + TG+K S K+ + E PYDFS+ ++ H +++ K+QHWK+M R +KM++ GL+EEV++LL +GF+ + KPLQSIGYKE I +N + +AE L ERIYINTRRLAKSQKTF KK+ PK ++ L ++ I++ FL
Sbjct: 109 YLRALMKGMYESETITDEVKSFFKEIYDSKGISEIIEYLKVNDPESLKNLHENDHYRLIRAAEHFKQTGQKISKQKEMFDAENPYDFSKHIHTNFDFLHLSMTIEKEQHWKLMKKRASKMIQSGLIEEVKTLLEQGFSGNEKPLQSIGYKETIQYLNGDISDEAE---------LAERIYINTRRLAKSQKTFLKKVTPKTEFSFLTQQDNILESVDQFL 319
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Match:
A0A1J5KCS3_9PROT (tRNA dimethylallyltransferase n=1 Tax=Bacteriovorax sp. MedPE-SWde TaxID=1860085 RepID=A0A1J5KCS3_9PROT)
HSP 1 Score: 176 bits (447), Expect = 9.490e-51
Identity = 100/220 (45.45%), Postives = 136/220 (61.82%), Query Frame = 1
Query: 1 YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENLHENDHYRNRRALEFYYTTGKKFSDSKKDKEEEGPYDFSRPFKADWKIHHAYLSLPKDQHWKIMDLRVAKMLKDGLLEEVESLLLKGFNPDLKPLQSIGYKECIDLINFLKTGQAEKDKPTDLVSLRERIYINTRRLAKSQKTFFKKIEPKITYNSLKDKELIVQDCLHFL 660
YVR+LIKG+YE S E+++ + +EG + L +DPES + LHENDHYR RA E Y TTG S KK +E PYDFS+ + DW + H L LPK+ HW+IM+ R +M+ GL+EEV+ LL +G KP+QSIGYKE + ++ T + E L ER++INTRRLAKSQKTF KKI PK T+++L++++ I FL
Sbjct: 110 YVRSLIKGMYESPSPTDELKEEIEILYKKEGIAPFINFLSKNDPESLQQLHENDHYRLMRAYEHYKTTGSPISVQKKSYDENNPYDFSKNIRPDWDMLHISLELPKELHWQIMEKRAKEMIDTGLIEEVKELLAQGHTGHEKPMQSIGYKETLAHLSGDLTSKKE---------LVERVFINTRRLAKSQKTFLKKITPKETFHTLEERDKIFDLVSRFL 320
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Match:
UPI000FDC73D2 (tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA n=1 Tax=Halobacteriovorax sp. HLS TaxID=2234000 RepID=UPI000FDC73D2)
HSP 1 Score: 174 bits (441), Expect = 7.500e-50
Identity = 100/220 (45.45%), Postives = 132/220 (60.00%), Query Frame = 1
Query: 1 YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENLHENDHYRNRRALEFYYTTGKKFSDSKKDKEEEGPYDFSRPFKADWKIHHAYLSLPKDQHWKIMDLRVAKMLKDGLLEEVESLLLKGFNPDLKPLQSIGYKECIDLINFLKTGQAEKDKPTDLVSLRERIYINTRRLAKSQKTFFKKIEPKITYNSLKDKELIVQDCLHFL 660
Y+RA IKG+YE + + QKI +EG + RD LK +D S+ NLHENDHYRN RA EF+ SD KK +E PYDFS ++ +HH YL L K +HW I+ R +M+KDGL+ EV LL GF + KPLQSIGYKE I +N Q E ER+ I+TR+LAKSQ+TFFKK+ PK +Y+ + D+ I++D F+
Sbjct: 110 YLRAFIKGMYESQPISDKVRNDSQKIFEQEGIQFFRDFLKKNDISSYNNLHENDHYRNIRAYEFFIQNNCPISDEKKKHDENSPYDFSINRLKNYSLHHIYLDLDKQEHWNIILNRCHQMVKDGLINEVRDLLTNGFTGNEKPLQSIGYKETIQFLNNEFKDQNEYI---------ERMAISTRQLAKSQRTFFKKVVPKKSYHPILDRSKIIEDAQIFI 320
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Match:
E1WXL3_HALMS (tRNA dimethylallyltransferase n=2 Tax=Halobacteriovorax marinus TaxID=97084 RepID=E1WXL3_HALMS)
HSP 1 Score: 172 bits (437), Expect = 3.210e-49
Identity = 99/217 (45.62%), Postives = 132/217 (60.83%), Query Frame = 1
Query: 1 YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENLHENDHYRNRRALEFYYTTGKKFSDSKKDKEEEGPYDFSRPFKADWKIHHAYLSLPKDQHWKIMDLRVAKMLKDGLLEEVESLLLKGFNPDLKPLQSIGYKECIDLINFLKTGQAEKDKPTDLVSLRERIYINTRRLAKSQKTFFKKIEPKITYNSLKDKELIVQDCL 651
Y+RA +KG+Y+ + +K+ K E G IR++L+ DP SF LHENDHYRN RA E TG+ S K+ +E PYDF+ D+ I H YL LPK++HWKI+ R +M+ +GL+ EV++LL GF+ KPL SIGYKE I IN E D D + ERI I+TR+LAKSQ+TFFKK+ PK T++ + DK IV L
Sbjct: 112 YIRAFVKGMYDSNPISEDLRDKIDKEYKERGIHFIREILEKRDPASFNQLHENDHYRNIRAYEHLMATGEPISQQKQKSDENNPYDFTINRLKDFDIIHIYLDLPKEEHWKIILKRTEEMVANGLVAEVKNLLASGFDGSEKPLGSIGYKETIQFIN------GEFDSEQDYI---ERIAISTRQLAKSQRTFFKKVTPKATFHPIDDKNKIVNHTL 319
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Match:
A0A2E6H147_9PROT (tRNA dimethylallyltransferase n=1 Tax=Halobacteriovorax sp. TaxID=2020862 RepID=A0A2E6H147_9PROT)
HSP 1 Score: 171 bits (432), Expect = 1.660e-48
Identity = 95/220 (43.18%), Postives = 137/220 (62.27%), Query Frame = 1
Query: 1 YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENLHENDHYRNRRALEFYYTTGKKFSDSKKDKEEEGPYDFSRPFKADWKIHHAYLSLPKDQHWKIMDLRVAKMLKDGLLEEVESLLLKGFNPDLKPLQSIGYKECIDLINFLKTGQAEKDKPTDLVSLRERIYINTRRLAKSQKTFFKKIEPKITYNSLKDKELIVQDCLHFL 660
Y+RALIKG+YE + +++ + E+G + + L++ DP++ + LHENDHYR RA E TG+ FS +K E PYD S DW+IHH YL LPK++HW + R +ML+DGL+ EVE LL GF + KPL+SIGY E I+ + ++E ERI I+TR+LAKSQ+TFFKKI PK +Y+ +KD+E I+++ + F+
Sbjct: 110 YLRALIKGMYESTKVDTESKKEIDSLYKEKGIKPFIEFLESKDPDTMKILHENDHYRIIRAYEHVLQTGQPFSVERKRMEALNPYDLSSGIHEDWEIHHIYLDLPKEEHWSYITRRTRQMLEDGLVGEVEKLLSSGFTGEEKPLKSIGYIETIEYLQNKFENESE---------YLERISISTRQLAKSQRTFFKKITPKFSYHPIKDEEEILKNAIDFV 320
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Match:
A0A1Y5F638_9PROT (tRNA dimethylallyltransferase n=1 Tax=Halobacteriovorax marinus TaxID=97084 RepID=A0A1Y5F638_9PROT)
HSP 1 Score: 170 bits (430), Expect = 3.310e-48
Identity = 99/221 (44.80%), Postives = 139/221 (62.90%), Query Frame = 1
Query: 1 YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENLHENDHYRNRRALEFYYTTGKKFSDSKKDKEEEGPYDFSRPFKADWKIHHAYLSLPKDQHWKIMDLRVAKMLKDGLLEEVESLLLKGFNPDLKPLQSIGYKECIDLINFLKTGQAEKDKPTDLVSLRERIYINTRRLAKSQKTFFKKIEPKITYNSLKDKELIVQDCLHFLA 663
Y+RA +KG+Y+ S +VQK EG R+ LK HDP+S+E LHENDHYRN RA E + +T S+ ++ ++ PYDFS ++ I H YL L KD+HWKI+ R +M+K+GL+EEV +LL GF + KPL+SIGYKE I IN G+ K TD ER+ I+TR+LAKSQ+TFFKK+ PK ++ + D++ I++ L F+
Sbjct: 109 YIRAFVKGMYDSAPVDQSLRNEVQKKFEHEGIHFFRNFLKEHDPKSYETLHENDHYRNLRAYEHFISTNSPISEQREKLDQLSPYDFSINRLDNFNIFHIYLDLEKDEHWKIILDRSTQMVKEGLVEEVRNLLANGFTGEEKPLKSIGYKETIQFIN----GEF---KSTD--EYIERMAISTRQLAKSQRTFFKKVTPKNCFHPIHDQDKILKQTLDFIG 320
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10151.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 25
0 1 Expect = 2.25e-58 / Id = 48.64 Expect = 1.02e-55 / Id = 47.73 Expect = 1.18e-54 / Id = 47.77 Expect = 2.66e-51 / Id = 48.64 Expect = 6.72e-51 / Id = 45.45 Expect = 9.49e-51 / Id = 45.45 Expect = 7.50e-50 / Id = 45.45 Expect = 3.21e-49 / Id = 45.62 Expect = 1.66e-48 / Id = 43.18 Expect = 3.31e-48 / Id = 44.80 Sequence A0A2E3XQB5_9PROT T0SSI4_9PROT A0A496XQ13_9PROT A0A523J9N4_9DELT A0A2D5YLU6_9PROT A0A1J5KCS3_9PROT UPI000FDC73D2 E1WXL3_HALMS A0A2E6H147_9PROT A0A1Y5F638_9PROT Pages
back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 0 Seed ortholog 1353529.M899_2791 Preferred name miaA PFAMs IPPT Model size 684 Max annot lvl 213481|Bdellovibrionales KEGG rclass RC02820 KEGG ko ko:K00791 KEGG Reaction R01122 KEGG Pathway ko00908,ko01100,ko01110,map00908,map01100,map01110 Hectar predicted targeting category other localisation GOs GO:0003674,GO:0003824,GO:0006139,GO:0006396,GO:0006399,GO:0006400,GO:0006725,GO:0006807,GO:0008033,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0010467,GO:0016070,GO:0016740,GO:0016765,GO:0034470,GO:0034641,GO:0034660,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0046483,GO:0052381,GO:0071704,GO:0090304,GO:0140098,GO:0140101,GO:1901360 Exons 1 Evalue 1.67e-56 EggNOG OGs COG0324@1|root,COG0324@2|Bacteria,1MUB2@1224|Proteobacteria,42M7V@68525|delta/epsilon subdivisions,2MT6I@213481|Bdellovibrionales,2WIUB@28221|Deltaproteobacteria EC 2.5.1.75 Description Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) Cds size 684 COG category J BRITE ko00000,ko00001,ko01000,ko01006,ko03016
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586750.3964758-CDS-C-australica_Contig_10151:2..686 1682586750.3964758-CDS-C-australica_Contig_10151:2..686 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_10151 3..686 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10151.1.1
>prot_C-australica_Contig_10151.1.1 ID=prot_C-australica_Contig_10151.1.1|Name=mRNA_C-australica_Contig_10151.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=228bp
YVRALIKGLYEGESSAPSAIEKVQKIENEEGWEKIRDLLKTHDPESFENL back to top mRNA from alignment at C-australica_Contig_10151:3..686+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10151.1.1 ID=mRNA_C-australica_Contig_10151.1.1|Name=mRNA_C-australica_Contig_10151.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=684bp|location=Sequence derived from alignment at C-australica_Contig_10151:3..686+ (Chrysoparadoxa australica CS_1217)TACGTTCGTGCTCTCATTAAAGGTCTCTATGAGGGTGAAAGTTCAGCTCC
CTCTGCCATTGAAAAAGTTCAAAAAATAGAGAATGAGGAAGGATGGGAGA
AGATAAGGGATCTTTTGAAAACTCATGATCCAGAATCCTTTGAGAATCTC
CATGAGAATGACCATTACCGAAATAGGAGAGCGCTAGAGTTTTATTATAC
AACTGGTAAAAAGTTTAGTGACTCCAAAAAGGATAAAGAAGAAGAAGGGC
CCTATGACTTCTCTCGTCCTTTTAAGGCCGATTGGAAAATTCATCATGCT
TATCTGAGTCTTCCGAAAGATCAACATTGGAAAATAATGGATCTGAGGGT
TGCTAAGATGCTTAAAGATGGACTCTTAGAGGAAGTCGAAAGTCTTCTCC
TAAAAGGCTTCAATCCCGATTTAAAACCCTTACAAAGTATTGGATATAAA
GAGTGCATTGATCTTATTAATTTTCTAAAAACTGGACAGGCAGAAAAGGA
TAAACCTACTGATCTTGTCAGCCTCCGTGAAAGAATTTATATCAACACAC
GAAGACTCGCAAAATCACAGAAAACCTTTTTTAAAAAGATCGAGCCAAAA
ATCACTTATAATTCTCTTAAGGATAAAGAGCTAATTGTGCAAGATTGCCT
TCATTTTCTAGCACCTTATACCGATTTAGGTTAA back to top Coding sequence (CDS) from alignment at C-australica_Contig_10151:3..686+
>mRNA_C-australica_Contig_10151.1.1 ID=mRNA_C-australica_Contig_10151.1.1|Name=mRNA_C-australica_Contig_10151.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=684bp|location=Sequence derived from alignment at C-australica_Contig_10151:3..686+ (Chrysoparadoxa australica CS_1217) back to top