mRNA_C-australica_Contig_10150.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10150.1.1
Unique NamemRNA_C-australica_Contig_10150.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Match: A0A222E3V8_9RHOB (Putative enoyl-CoA hydratase 1 n=3 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E3V8_9RHOB)

HSP 1 Score: 255 bits (652), Expect = 8.430e-86
Identity = 126/132 (95.45%), Postives = 129/132 (97.73%), Query Frame = 1
Query:    1 MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLDAERASKTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDQGDGWLDVHWDVVVEIEGAAGP 396
            MLADDLRDLAPRE+DWVTLD+ARVKAFADATEDWQFIHLD ERASKTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVD+GDGWLDVHWDV VEIEGAA P
Sbjct:    1 MLADDLRDLAPRESDWVTLDSARVKAFADATEDWQFIHLDPERASKTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDEGDGWLDVHWDVEVEIEGAARP 132          
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Match: A0A238KXC1_9RHOB (Putative enoyl-CoA hydratase 1 n=1 Tax=Maliponia aquimaris TaxID=1673631 RepID=A0A238KXC1_9RHOB)

HSP 1 Score: 218 bits (554), Expect = 7.340e-71
Identity = 106/132 (80.30%), Postives = 115/132 (87.12%), Query Frame = 1
Query:    1 MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLDAERASKTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDQGDGWLDVHWDVVVEIEGAAGP 396
            MLADDLRDL   ET W+TLDA RV+AFADATEDWQFIHLD ERA++T FGG VAHGFLTLSMLSMMSYQVMEGI G+ SS+NYGFDRIRFVSPVRVG RVRGRF VASVD+G+GWL VHWDV VE+EG   P
Sbjct:    1 MLADDLRDLPSFETRWITLDAGRVRAFADATEDWQFIHLDEERAAQTPFGGCVAHGFLTLSMLSMMSYQVMEGIEGMSSSINYGFDRIRFVSPVRVGRRVRGRFVVASVDEGEGWLGVHWDVEVEVEGEEKP 132          
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Match: A0A6F8QBC3_9RHOB (Nodulation protein NodN n=7 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A6F8QBC3_9RHOB)

HSP 1 Score: 213 bits (542), Expect = 5.290e-69
Identity = 107/133 (80.45%), Postives = 116/133 (87.22%), Query Frame = 1
Query:    1 MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLDAER-ASKTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDQGDGWLDVHWDVVVEIEGAAGP 396
            MLADDLRD+APR + WVTLDAARVK FADATEDWQFIHLD ER A++T FGG VAHGFLTLSMLS MSY++MEG+ GV SSVNYGFDRIRFVSPVRVG R+RGRF VASVD+ DG LDVHWDV VEIEGA  P
Sbjct:    1 MLADDLRDMAPRASGWVTLDAARVKLFADATEDWQFIHLDEERSAAETPFGGCVAHGFLTLSMLSKMSYEIMEGLAGVRSSVNYGFDRIRFVSPVRVGRRIRGRFTVASVDERDGCLDVHWDVEVEIEGAERP 133          
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Match: A3K3I0_9RHOB (NodN-like protein n=2 Tax=Sagittula TaxID=58842 RepID=A3K3I0_9RHOB)

HSP 1 Score: 211 bits (538), Expect = 2.150e-68
Identity = 103/132 (78.03%), Postives = 113/132 (85.61%), Query Frame = 1
Query:    1 MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLDAERASKTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDQGDGWLDVHWDVVVEIEGAAGP 396
            MLADDLR +APRE+DW TLDA RVKAFADAT+DWQ IHLDAE ASKT FGGT+AHGFLTLSMLS MSYQV +G+ G  SSVNYGFDR+RFVSPVRVG RVRGRF+VA VD+G+ WLDVHWDV VE EG   P
Sbjct:    1 MLADDLRTMAPRESDWFTLDARRVKAFADATDDWQDIHLDAEFASKTPFGGTIAHGFLTLSMLSAMSYQVTKGLTGFSSSVNYGFDRVRFVSPVRVGRRVRGRFSVAGVDEGESWLDVHWDVEVEKEGETRP 132          
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Match: A0A238J9X6_9RHOB (Putative enoyl-CoA hydratase 1 n=1 Tax=Pelagimonas phthalicica TaxID=1037362 RepID=A0A238J9X6_9RHOB)

HSP 1 Score: 206 bits (525), Expect = 2.060e-66
Identity = 101/133 (75.94%), Postives = 113/133 (84.96%), Query Frame = 1
Query:    1 MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLDAERAS-KTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDQGDGWLDVHWDVVVEIEGAAGP 396
            ML DDLR L  R +DWVTLDAARV+AFAD TEDWQFIHLD  RA+ +T FGG +AHGFLTLSMLSMMSYQ++  +PG+ +S+NYGFDRIRFVSPVRVG RVRGRFAVASVD+GDGWL VHWDV VEIE A  P
Sbjct:    1 MLVDDLRALPERHSDWVTLDAARVRAFADTTEDWQFIHLDEARAAAETPFGGAIAHGFLTLSMLSMMSYQIVPDLPGLGASINYGFDRIRFVSPVRVGARVRGRFAVASVDEGDGWLAVHWDVTVEIENAERP 133          
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Match: A0A7W6GS32_9RHOB (Acyl dehydratase n=1 Tax=Sagittula marina TaxID=943940 RepID=A0A7W6GS32_9RHOB)

HSP 1 Score: 205 bits (521), Expect = 9.230e-66
Identity = 102/137 (74.45%), Postives = 115/137 (83.94%), Query Frame = 1
Query:    1 MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLDAERASKTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDQGD-----GWLDVHWDVVVEIEGAAGP 396
            MLAD+LR +AP E++W  LD ARVKAFADATEDWQ IHLDAE AS++AFGGT++HGFLTLSMLS MSYQVM+GI GV SSVNYGFDRIRFVSPVRVG RVRGRF++A VD+ +     GWLDVHWDV VEIEG   P
Sbjct:    1 MLADELRSMAPAESEWFKLDTARVKAFADATEDWQDIHLDAEFASRSAFGGTISHGFLTLSMLSAMSYQVMKGIAGVASSVNYGFDRIRFVSPVRVGRRVRGRFSIAGVDEPEEGEEGGWLDVHWDVEVEIEGETRP 137          
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Match: UPI001C941ED4 (MaoC family dehydratase n=2 Tax=Rhodobacterales TaxID=204455 RepID=UPI001C941ED4)

HSP 1 Score: 204 bits (520), Expect = 1.190e-65
Identity = 99/133 (74.44%), Postives = 111/133 (83.46%), Query Frame = 1
Query:    1 MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLDAERAS-KTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDQGDGWLDVHWDVVVEIEGAAGP 396
            MLADDLRD+APR T+W+ +DA RV AFADAT DWQFIHLD  RA+ +T FGG VAHGFLTLSMLS MS  VM G+ G+ S VNYGFDRIRF+SPVRVG R+RGRF VASVD+G+GWLDVHWDV VEIEGA  P
Sbjct:    1 MLADDLRDMAPRATEWIEMDAGRVSAFADATADWQFIHLDEARAATETPFGGCVAHGFLTLSMLSAMSNDVMSGLSGITSRVNYGFDRIRFISPVRVGKRIRGRFTVASVDEGEGWLDVHWDVEVEIEGAERP 133          
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Match: A0A238K468_9RHOB (Putative enoyl-CoA hydratase 1 n=1 Tax=Pelagimonas varians TaxID=696760 RepID=A0A238K468_9RHOB)

HSP 1 Score: 201 bits (512), Expect = 1.970e-64
Identity = 97/133 (72.93%), Postives = 113/133 (84.96%), Query Frame = 1
Query:    1 MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLD-AERASKTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDQGDGWLDVHWDVVVEIEGAAGP 396
            M+ DDLR L  + +DWV LDAA+VKAFAD+TEDWQFIHLD A  A++T FGG +AHGFLTLS+LSMMSYQ+M   PG+ +S+NYGFDRIRFVSPVRVG RVRGRFAVASVD+GDGWL VHWDV +EIE +A P
Sbjct:    1 MIVDDLRALPEQLSDWVLLDAAKVKAFADSTEDWQFIHLDDARAAAETPFGGAIAHGFLTLSLLSMMSYQIMPKFPGLRASINYGFDRIRFVSPVRVGARVRGRFAVASVDEGDGWLGVHWDVTIEIEDSARP 133          
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Match: A0A8J7WCU8_9RHOB (MaoC family dehydratase n=1 Tax=Aestuariicoccus sp. KMU-90 TaxID=2827239 RepID=A0A8J7WCU8_9RHOB)

HSP 1 Score: 201 bits (511), Expect = 2.620e-64
Identity = 98/132 (74.24%), Postives = 109/132 (82.58%), Query Frame = 1
Query:    1 MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLDAERASKTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDQGDGWLDVHWDVVVEIEGAAGP 396
            MLAD+LR LAPRET W  +D ARV+AFADATEDWQFIHLD ERA++T  GG V HGFLTLSMLS MSY+V EG+ G  SSVNYGFDRIRFVSPVRVG  +RGRF+VA VD+ +G LDVHWDV VEIEGA  P
Sbjct:    1 MLADELRSLAPRETRWFAMDTARVRAFADATEDWQFIHLDEERAAQTPMGGAVVHGFLTLSMLSAMSYEVTEGLAGFASSVNYGFDRIRFVSPVRVGSNIRGRFSVAGVDEREGALDVHWDVAVEIEGADRP 132          
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Match: A0A0P1GRZ6_9RHOB (Putative enoyl-CoA hydratase 1 n=1 Tax=Tropicibacter naphthalenivorans TaxID=441103 RepID=A0A0P1GRZ6_9RHOB)

HSP 1 Score: 200 bits (509), Expect = 6.010e-64
Identity = 99/133 (74.44%), Postives = 112/133 (84.21%), Query Frame = 1
Query:    1 MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLDAERA-SKTAFGGTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRVRGRFAVASVDQGDGWLDVHWDVVVEIEGAAGP 396
            MLADDLR LAP+ T W  +DAARVKAFADATEDWQFIHLD +RA ++T FGG V HGFLTLSMLS MSYQV+EGI G  SS+NYGFDRIRFVSPVRVG  +RG F VASVD+GDG+LDVHWDV+VE++G   P
Sbjct:    1 MLADDLRALAPQTTRWFEMDAARVKAFADATEDWQFIHLDEDRAKAETPFGGCVTHGFLTLSMLSAMSYQVVEGIEGFASSINYGFDRIRFVSPVRVGSSIRGEFTVASVDEGDGFLDVHWDVLVEVKGQDRP 133          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10150.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222E3V8_9RHOB8.430e-8695.45Putative enoyl-CoA hydratase 1 n=3 Tax=Roseobacter... [more]
A0A238KXC1_9RHOB7.340e-7180.30Putative enoyl-CoA hydratase 1 n=1 Tax=Maliponia a... [more]
A0A6F8QBC3_9RHOB5.290e-6980.45Nodulation protein NodN n=7 Tax=Roseobacteraceae T... [more]
A3K3I0_9RHOB2.150e-6878.03NodN-like protein n=2 Tax=Sagittula TaxID=58842 Re... [more]
A0A238J9X6_9RHOB2.060e-6675.94Putative enoyl-CoA hydratase 1 n=1 Tax=Pelagimonas... [more]
A0A7W6GS32_9RHOB9.230e-6674.45Acyl dehydratase n=1 Tax=Sagittula marina TaxID=94... [more]
UPI001C941ED41.190e-6574.44MaoC family dehydratase n=2 Tax=Rhodobacterales Ta... [more]
A0A238K468_9RHOB1.970e-6472.93Putative enoyl-CoA hydratase 1 n=1 Tax=Pelagimonas... [more]
A0A8J7WCU8_9RHOB2.620e-6474.24MaoC family dehydratase n=1 Tax=Aestuariicoccus sp... [more]
A0A0P1GRZ6_9RHOB6.010e-6474.44Putative enoyl-CoA hydratase 1 n=1 Tax=Tropicibact... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10150contigC-australica_Contig_10150:441..836 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog388399.SSE37_11139
Preferred namenodN
PFAMsMaoC_dehydratas
Model size396
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.53e-69
EggNOG OGsCOG2030@1|root,COG2030@2|Bacteria,1RHPH@1224|Proteobacteria,2U9GG@28211|Alphaproteobacteria
Descriptiondehydratase
Cds size396
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586750.3581176-CDS-C-australica_Contig_10150:440..8361682586750.3581176-CDS-C-australica_Contig_10150:440..836Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10150 441..836 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10150.1.1prot_C-australica_Contig_10150.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10150 441..836 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10150.1.1

>prot_C-australica_Contig_10150.1.1 ID=prot_C-australica_Contig_10150.1.1|Name=mRNA_C-australica_Contig_10150.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=132bp
MLADDLRDLAPRETDWVTLDAARVKAFADATEDWQFIHLDAERASKTAFG
GTVAHGFLTLSMLSMMSYQVMEGIPGVLSSVNYGFDRIRFVSPVRVGLRV
RGRFAVASVDQGDGWLDVHWDVVVEIEGAAGP
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mRNA from alignment at C-australica_Contig_10150:441..836+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10150.1.1 ID=mRNA_C-australica_Contig_10150.1.1|Name=mRNA_C-australica_Contig_10150.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=396bp|location=Sequence derived from alignment at C-australica_Contig_10150:441..836+ (Chrysoparadoxa australica CS_1217)
ATGCTGGCTGACGATCTGCGCGACCTTGCCCCGCGTGAAACTGACTGGGT GACGCTGGATGCGGCGCGCGTCAAGGCATTTGCCGATGCGACGGAGGACT GGCAGTTTATCCACCTTGACGCGGAACGCGCGTCAAAGACCGCGTTTGGC GGGACTGTGGCGCATGGCTTCCTGACGCTTTCGATGCTGTCGATGATGTC CTATCAGGTGATGGAGGGGATCCCGGGCGTTCTGTCCAGTGTGAACTACG GTTTTGATCGCATCCGCTTTGTCTCACCCGTGCGGGTTGGGCTCCGGGTG CGCGGGCGGTTTGCCGTGGCGAGCGTGGACCAGGGCGATGGCTGGCTGGA TGTACATTGGGACGTGGTGGTCGAGATAGAGGGCGCGGCTGGGCCG
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Coding sequence (CDS) from alignment at C-australica_Contig_10150:441..836+

>mRNA_C-australica_Contig_10150.1.1 ID=mRNA_C-australica_Contig_10150.1.1|Name=mRNA_C-australica_Contig_10150.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=396bp|location=Sequence derived from alignment at C-australica_Contig_10150:441..836+ (Chrysoparadoxa australica CS_1217)
ATGCTGGCTGACGATCTGCGCGACCTTGCCCCGCGTGAAACTGACTGGGT
GACGCTGGATGCGGCGCGCGTCAAGGCATTTGCCGATGCGACGGAGGACT
GGCAGTTTATCCACCTTGACGCGGAACGCGCGTCAAAGACCGCGTTTGGC
GGGACTGTGGCGCATGGCTTCCTGACGCTTTCGATGCTGTCGATGATGTC
CTATCAGGTGATGGAGGGGATCCCGGGCGTTCTGTCCAGTGTGAACTACG
GTTTTGATCGCATCCGCTTTGTCTCACCCGTGCGGGTTGGGCTCCGGGTG
CGCGGGCGGTTTGCCGTGGCGAGCGTGGACCAGGGCGATGGCTGGCTGGA
TGTACATTGGGACGTGGTGGTCGAGATAGAGGGCGCGGCTGGGCCG
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