mRNA_C-australica_Contig_1015.2.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1015.2.1
Unique NamemRNA_C-australica_Contig_1015.2.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
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BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Match: D8LKP8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP8_ECTSI)

HSP 1 Score: 255 bits (652), Expect = 2.430e-67
Identity = 133/231 (57.58%), Postives = 156/231 (67.53%), Query Frame = 2 
Query:  239 IGQPLGSPYVMQSNRAKQKKGTGRVTVKGSKKGSIAPKYTTHPNP----------SMPAMSGEIVISREEQAMLDAAWSKEMDEVLREGVLRYGVSWDMVAGHMRPADVTVKQCEARWQMVRNNPVKGPWATEEDELLRRLVAIHGSKKWSQIAQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSEISRLLPGRAENAVKNRFNSIITKRLSQE 901
            +  PLGSP + Q+ RAKQKKG G         G  A +                  +P +   I ++  E  +L A W +EMDE+LREGVLRYG  W+ V+ HM P +   ++ E RWQMV+ NPVKGPW+ EED LL+ LV  +G KKWS IA QFPGRSGKQCRERWLNHLDTRVKKS WT  ED  LCEAQ RLGNKWSEIS+LLPGRAENAVKNRFNSIITKRL+ +
Sbjct:    6 LKSPLGSPAMQQTVRAKQKKGAGGEGTASGTGGKAAAERKAAARAWEANNKRRSIPLPPVGPGIEVTAAEAMILGARWDREMDEMLREGVLRYGADWEEVSTHMAPHECPKEEVEKRWQMVKANPVKGPWSPEEDSLLKVLVDEYGRKKWSLIATQFPGRSGKQCRERWLNHLDTRVKKSAWTGAEDMKLCEAQGRLGNKWSEISKLLPGRAENAVKNRFNSIITKRLASQ 236
[Close]
BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Match: A0A835Z962_9STRA (Homeodomain-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z962_9STRA)

HSP 1 Score: 212 bits (539), Expect = 3.180e-60
Identity = 102/161 (63.35%), Postives = 126/161 (78.26%), Query Frame = 2 
Query:  425 MLDAAWSKEMDEVLREGVLRYGVS-WDMVAGHMRPA-----DVTVKQCEARWQMVRNNPVKGPWATEEDELLRRLVAIHGSKKWSQIAQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSEISRLLPGRAENAVKNRFNSIITKR 889
            ML+A W+K+MD+ LREGVLRYG+S W  V  HM+       DV   +C  RWQ++ + PVKGPWA+EED++LR LV  +G+KKWS +A   PGR+GKQCRERWLNHLD RV K+ WT EED +L +AQR LGN+WS+ISR+LPGRAENAVKNRFNS+ITKR
Sbjct:    1 MLNAKWTKDMDDTLREGVLRYGMSEWPKVMAHMQVQSHVLEDVESLECHQRWQIICDLPVKGPWASEEDDVLRALVKQYGNKKWSHVATGLPGRTGKQCRERWLNHLDIRVMKTSWTPEEDELLFDAQRELGNQWSKISRMLPGRAENAVKNRFNSLITKR 161
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BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Match: F0YHL4_AURAN (Uncharacterized protein (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHL4_AURAN)

HSP 1 Score: 201 bits (510), Expect = 1.880e-56
Identity = 102/159 (64.15%), Postives = 121/159 (76.10%), Query Frame = 2 
Query:  440 WSKEMDEVLREGVLRYGVS-WDMVAGHMRPA------DVTVKQCEARWQ-MVRNNPVKGPWATEEDELLRRLVAIHGSKKWSQIAQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSEISRLLPGRAENAVKNRFNSIITKRL 892
            W++E D VLREGVLR+G S W+ V+ H+ P            +CEARW+ +VR+  VKGPW  EED LLR+LV   G K+W+ IA   PGR+GKQCRERWLNHLDTRV KS WT +ED VL EAQ+R+GNKWSEI+RLLPGRAENAVKNRFNS+ITKRL
Sbjct:    1 WTEEEDAVLREGVLRFGTSAWEDVSRHLLPPVQGGPQKRQAPECEARWEAVVRHTAVKGPWLPEEDSLLRQLVNKFGPKRWALIASHIPGRAGKQCRERWLNHLDTRVIKSDWTPDEDAVLLEAQQRVGNKWSEIARLLPGRAENAVKNRFNSLITKRL 159
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BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Match: A0A7S2WV82_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV82_9STRA)

HSP 1 Score: 218 bits (555), Expect = 7.260e-56
Identity = 103/155 (66.45%), Postives = 128/155 (82.58%), Query Frame = 2 
Query:  437 AWSKEMDEVLREGVLRYGVS-WDMVAGHMRPA-DVTVKQCEARWQMVRNNPVKGPWATEEDELLRRLVAIHGSKKWSQIAQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSEISRLLPGRAENAVKNRFNSIITKRLS 895
            AW +E D VLRE VLR+GVS W  V+ HM P+   +  QCE RW++V+NNPVKGPW  EED+LLR LV   G K+WS+IA++ PGR+GKQCRERWLNHLD+ VKKS WT EED++L EAQRR+GN+WSEI+R+LPGRAENAVKNR+NS+ITK+L+
Sbjct:  136 AWGEEEDAVLREAVLRFGVSNWPAVSSHMLPSCHRSADQCEIRWRVVKNNPVKGPWLPEEDQLLRDLVGQFGPKQWSKIAEKIPGRAGKQCRERWLNHLDSSVKKSDWTPEEDKILLEAQRRVGNRWSEIARMLPGRAENAVKNRYNSLITKKLT 290
[Close]
BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Match: W7TQR3_9STRA (Myb-related protein a n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQR3_9STRA)

HSP 1 Score: 199 bits (505), Expect = 3.410e-50
Identity = 93/159 (58.49%), Postives = 116/159 (72.96%), Query Frame = 2 
Query:  440 WSKEMDEVLREGVLRYGVS-WDMVAGHMRPADVTVKQCEARWQMVRNNPVKGPWATEEDELLRRLVAIHGS--KKWSQIAQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSEISRLLPGRAENAVKNRFNSIITKRLSQEHG 907
            W+ E D++LRE +LR G   W  +  HM P   +  +C  RW  +++ PVKGPW+ EED LL+ LV  +G   KKWS +AQ  PGR+GKQCRERWLNHLD  VKK  W E ED +LC+AQRRLGNKWSEI++LLPGRAEN+VKNRFNS+IT+R S  +G
Sbjct:  149 WTSEQDDLLREAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQLLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYG 307
[Close]
BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Match: A0A8J2SUI4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SUI4_9STRA)

HSP 1 Score: 194 bits (494), Expect = 2.940e-49
Identity = 99/160 (61.88%), Postives = 118/160 (73.75%), Query Frame = 2 
Query:  440 WSKEMDEVLREGVLRYGVS-WDMVAGHMRPA------DVTVKQCEARWQM-VRNNPVKGPWATEEDELLRRLVAIHGSKKWSQIAQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSEISRLLPGRAENAVKNRFNSIITKRLS 895
            W++E D VLREGVLR+G   W  VA H+ P         T   C+ARW   VR+  VKGPW  EED LLR+LVA  G K+W+ IA   PGR+GKQCRERWLNHLD+RV KS WT +ED +L +AQ+R+GNKWSEI+R LPGRAENAVKNRFNS+ITKRL+
Sbjct:   60 WTEEEDAVLREGVLRFGTGDWSKVARHLLPPINGGPQKRTPDDCQARWDAAVRHAAVKGPWLPEEDNLLRQLVAKFGPKRWALIASHIPGRAGKQCRERWLNHLDSRVVKSDWTPDEDAILLDAQQRVGNKWSEIARGLPGRAENAVKNRFNSLITKRLT 219
[Close]
BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Match: D7FZ02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ02_ECTSI)

HSP 1 Score: 186 bits (473), Expect = 3.860e-47
Identity = 89/161 (55.28%), Postives = 119/161 (73.91%), Query Frame = 2 
Query:  440 WSKEMDEVLREGVLRYG--VSWDMVAGHMR--PADVTVKQCEARWQMVRNNPVKGPWATEEDELLRRLVAIHGSKKWSQIAQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSEISRLLPGRAENAVKNRFNSIITKRLSQEHGN 910
            WS++ D VLR+ VLR    ++W+ +A  +      VT  +C  RW  V+  PVKGPW++EED+ L+RLV   GSKKW+ +A+ FPGRSGKQCRERW NH+D RVKK  W+ EED++LCEAQR+LGNKWSE+S++L GR+ENA+KNRFNS+  K L++   N
Sbjct:   12 WSRDTDLVLRDLVLRSSEEINWNQIATAIEWDSGAVTPSECRERWNYVKETPVKGPWSSEEDDHLKRLVDEFGSKKWNLLARAFPGRSGKQCRERWHNHVDGRVKKGEWSAEEDQILCEAQRQLGNKWSEMSKILVGRSENAIKNRFNSLNAKGLAEMRAN 172
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BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Match: D8MAX1_BLAHO (Uncharacterized protein n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8MAX1_BLAHO)

HSP 1 Score: 185 bits (469), Expect = 1.430e-46
Identity = 88/151 (58.28%), Postives = 111/151 (73.51%), Query Frame = 2 
Query:  440 WSKEMDEVLREGVLRYGVS-WDMVAGHMRPADVTVKQCEARW-QMVRNNPVKGPWATEEDELLRRLVAIHGSKKWSQIAQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSEISRLLPGRAENAVKNRFNSIITK 886
            W++E+DE++RE V RYG + W  V   +R   +T +QC+ RW Q++R+  VKGPW+ EED+LLR LV  HG KKWS IA    GR GKQCRERWLNHL   V K  WTEEED +L  AQ ++GNKWS IS+LLPGR+ENAVKNR+NSI ++
Sbjct:   12 WTRELDEMIREAVARYGSNDWSKVCQKLRTQQITPEQCQMRWEQVLRDQTVKGPWSEEEDKLLRSLVEKHGPKKWSTIASHINGRIGKQCRERWLNHLSPDVSKDVWTEEEDEILINAQFQMGNKWSFISKLLPGRSENAVKNRYNSIASR 162
[Close]
BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Match: K8YTL3_NANGC (V-myb myeloblastosis viral oncogene-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YTL3_NANGC)

HSP 1 Score: 187 bits (474), Expect = 7.410e-46
Identity = 88/152 (57.89%), Postives = 110/152 (72.37%), Query Frame = 2 
Query:  461 VLREGVLRYGVS-WDMVAGHMRPADVTVKQCEARWQMVRNNPVKGPWATEEDELLRRLVAIHGS--KKWSQIAQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSEISRLLPGRAENAVKNRFNSIITKRLSQEHG 907
            +  E +LR G   W  +  HM P   +  +C  RW  +++ PVKGPW+ EED LL++LV  +G   KKWS +AQ  PGR+GKQCRERWLNHLD  VKK  W E ED +LC+AQRRLGNKWSEI++LLPGRAEN+VKNRFNS+IT+R S  +G
Sbjct:   27 ICSEAILRNGTDKWAAITEHMLPFSFSSDECAVRWDEIKDVPVKGPWSVEEDALLQQLVGRYGPRPKKWSMLAQHIPGRAGKQCRERWLNHLDRSVKKGEWEEGEDAILCDAQRRLGNKWSEIAKLLPGRAENSVKNRFNSLITRRNSHRYG 178
[Close]
BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Match: A0A196SGZ8_BLAHN (Transcriptional activator Myb n=1 Tax=Blastocystis sp. subtype 1 (strain ATCC 50177 / NandII) TaxID=478820 RepID=A0A196SGZ8_BLAHN)

HSP 1 Score: 177 bits (450), Expect = 3.730e-44
Identity = 88/161 (54.66%), Postives = 114/161 (70.81%), Query Frame = 2 
Query:  413 EEQAMLDAA-WSKEMDEVLREGVLRYGVS-WDMVAGHMRPADVTVKQCEARWQMV-RNNPVKGPWATEEDELLRRLVAIHGSKKWSQIAQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSEISRLLPGRAENAVKNRFNSIITK 886
            ++Q   D++ W++E+DE++RE V RYG + W  V   +R   +T +QC+ RW+ V R+  VKGPW+ EED +LR LV   G KKWS IA    GR GKQCRERWLNHL   V K  WTEEED +L  AQ ++GNKWS IS+LLPGR+ENAVKNR+NSI ++
Sbjct:    2 QDQRQADSSLWTRELDEMIREAVARYGSNDWVKVCQKLRNQHITPEQCQERWETVLRDQTVKGPWSEEEDAILRSLVEKFGPKKWSTIASYINGRIGKQCRERWLNHLSPTVTKDVWTEEEDEILINAQIQMGNKWSYISKLLPGRSENAVKNRYNSIASR 162
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1015.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKP8_ECTSI2.430e-6757.58Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z962_9STRA3.180e-6063.35Homeodomain-like protein n=1 Tax=Tribonema minus T... [more]
F0YHL4_AURAN1.880e-5664.15Uncharacterized protein (Fragment) n=1 Tax=Aureoco... [more]
A0A7S2WV82_9STRA7.260e-5666.45Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
W7TQR3_9STRA3.410e-5058.49Myb-related protein a n=1 Tax=Nannochloropsis gadi... [more]
A0A8J2SUI4_9STRA2.940e-4961.88Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
D7FZ02_ECTSI3.860e-4755.28Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D8MAX1_BLAHO1.430e-4658.28Uncharacterized protein n=1 Tax=Blastocystis homin... [more]
K8YTL3_NANGC7.410e-4657.89V-myb myeloblastosis viral oncogene-like protein n... [more]
A0A196SGZ8_BLAHN3.730e-4454.66Transcriptional activator Myb n=1 Tax=Blastocystis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1015contigC-australica_Contig_1015:1812..7402 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LKP8
Model size2592
Max annot lvl2880.D8LKP8|-
Hectar predicted targeting categoryother localisation
Exons21
Evalue3.35e-69
EggNOG OGsCOG5147@1|root,KOG0048@2759|Eukaryota
Ec32 ortholog descriptionSANT/Myb domain transcription factor
Ec32 orthologEc-03_001110.1
DescriptionRNA polymerase II transcription regulator recruiting activity
Cds size2178
COG categoryADK
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586749.623142-UTR-C-australica_Contig_1015:1811..20081682586749.623142-UTR-C-australica_Contig_1015:1811..2008Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1015 1812..2008 -
1682586749.880806-UTR-C-australica_Contig_1015:7185..74021682586749.880806-UTR-C-australica_Contig_1015:7185..7402Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1015 7186..7402 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586749.641457-CDS-C-australica_Contig_1015:2008..22491682586749.641457-CDS-C-australica_Contig_1015:2008..2249Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 2009..2249 -
1682586749.6530404-CDS-C-australica_Contig_1015:2442..25951682586749.6530404-CDS-C-australica_Contig_1015:2442..2595Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 2443..2595 -
1682586749.6646104-CDS-C-australica_Contig_1015:2663..27251682586749.6646104-CDS-C-australica_Contig_1015:2663..2725Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 2664..2725 -
1682586749.6779048-CDS-C-australica_Contig_1015:2855..29441682586749.6779048-CDS-C-australica_Contig_1015:2855..2944Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 2856..2944 -
1682586749.6896074-CDS-C-australica_Contig_1015:3093..31991682586749.6896074-CDS-C-australica_Contig_1015:3093..3199Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 3094..3199 -
1682586749.7011533-CDS-C-australica_Contig_1015:3387..35161682586749.7011533-CDS-C-australica_Contig_1015:3387..3516Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 3388..3516 -
1682586749.7245512-CDS-C-australica_Contig_1015:3699..37931682586749.7245512-CDS-C-australica_Contig_1015:3699..3793Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 3700..3793 -
1682586749.732212-CDS-C-australica_Contig_1015:3920..40011682586749.732212-CDS-C-australica_Contig_1015:3920..4001Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 3921..4001 -
1682586749.7397192-CDS-C-australica_Contig_1015:4137..41871682586749.7397192-CDS-C-australica_Contig_1015:4137..4187Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 4138..4187 -
1682586749.7527754-CDS-C-australica_Contig_1015:4362..44971682586749.7527754-CDS-C-australica_Contig_1015:4362..4497Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 4363..4497 -
1682586749.7645142-CDS-C-australica_Contig_1015:4650..47881682586749.7645142-CDS-C-australica_Contig_1015:4650..4788Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 4651..4788 -
1682586749.7751331-CDS-C-australica_Contig_1015:4919..50471682586749.7751331-CDS-C-australica_Contig_1015:4919..5047Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 4920..5047 -
1682586749.7847571-CDS-C-australica_Contig_1015:5166..52541682586749.7847571-CDS-C-australica_Contig_1015:5166..5254Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 5167..5254 -
1682586749.7948241-CDS-C-australica_Contig_1015:5393..55021682586749.7948241-CDS-C-australica_Contig_1015:5393..5502Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 5394..5502 -
1682586749.803805-CDS-C-australica_Contig_1015:5708..58101682586749.803805-CDS-C-australica_Contig_1015:5708..5810Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 5709..5810 -
1682586749.8136878-CDS-C-australica_Contig_1015:5955..60481682586749.8136878-CDS-C-australica_Contig_1015:5955..6048Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 5956..6048 -
1682586749.8312051-CDS-C-australica_Contig_1015:6259..63441682586749.8312051-CDS-C-australica_Contig_1015:6259..6344Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 6260..6344 -
1682586749.8411295-CDS-C-australica_Contig_1015:6483..65351682586749.8411295-CDS-C-australica_Contig_1015:6483..6535Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 6484..6535 -
1682586749.850896-CDS-C-australica_Contig_1015:6612..67151682586749.850896-CDS-C-australica_Contig_1015:6612..6715Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 6613..6715 -
1682586749.860151-CDS-C-australica_Contig_1015:6864..69231682586749.860151-CDS-C-australica_Contig_1015:6864..6923Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 6865..6923 -
1682586749.8692768-CDS-C-australica_Contig_1015:7104..71851682586749.8692768-CDS-C-australica_Contig_1015:7104..7185Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1015 7105..7185 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1015.2.1prot_C-australica_Contig_1015.2.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1015 2009..7185 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1015.2.1

>prot_C-australica_Contig_1015.2.1 ID=prot_C-australica_Contig_1015.2.1|Name=mRNA_C-australica_Contig_1015.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=726bp
MKRDVGAIGQPLGSPYVMQSNRAKQKKGTGRVTVKGSKKGSIAPKYTTHP
NPSMPAMSGEIVISREEQAMLDAAWSKEMDEVLREGVLRYGVSWDMVAGH
MRPADVTVKQCEARWQMVRNNPVKGPWATEEDELLRRLVAIHGSKKWSQI
AQQFPGRSGKQCRERWLNHLDTRVKKSFWTEEEDRVLCEAQRRLGNKWSE
ISRLLPGRAENAVKNRFNSIITKRLSQEHGNHAGADFFGGHHKKVKVKVP
GGRGGATGRHKQSSTHLPPPPPVNSAKRGNSVPQRIIREEEQDYGNQNSQ
VLVNSIFKTLARGNSPQIPPTPPREKPPLIAAGRGMATLPTSDSPQRMLT
LNASSFGNKEGFLQQDNQNHLAMKMTRALVEEERRRDALFKRVQLSDAEL
ALLQSNLSLDAGEAALLSISNPEKDLESSPKDWTNGIQVKTEETAGDFPI
PPLLLRVSNSSIGFDKVKTEDVIPPPLDIGSPNVELERAFNMDSFKGGGR
LGPFSKSGLEDGFSDVAHAAVNRSDGRHGLARSRRLGSLSELTPGGLGSE
SLALRMSLNSLSLDDDDWKFLAQEVDTKTPCLPSKDVPMGAPGSSSFGGH
MLSAFPVSGDRLRRSRASMKSPAMGGMSPMARYLHEVEQIPDPAQRRERK
AALVEAFINQGMCSFPQPQPQPHQHCLCCQFLRANSSPHLNIGHANVCFC
PLLSRRLKELVMQLLICRGSGTSSF*
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mRNA from alignment at C-australica_Contig_1015:1812..7402-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1015.2.1 ID=mRNA_C-australica_Contig_1015.2.1|Name=mRNA_C-australica_Contig_1015.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=5591bp|location=Sequence derived from alignment at C-australica_Contig_1015:1812..7402- (Chrysoparadoxa australica CS_1217)
CCCTTCTACACCTCTGAAAGTATACCTGGCTTACTTACCCTGGAGCACTT
AGGAGAGGTCATACTATATTGTGTACCAAGGGGAAATTGCCCTCAGAGTC
CCTTCCAAGGAAGCAGTGACTGGAGAGTATGATCCTGTAAGCCTCTTAGG
CATCCCCTCGGGTTTATTTGAGTGAGATATAATTCTATTCAAGCGAGCTT
GAGGCAGGAGGGCGGCAATGAAGAGAGATGTAGGGGCAATTGGGCAACCC
TTGGGTAGCCCCTACGTAATGCAGAGCAATAGGGCGAAGCAAAAGAAGGT
GGGTCTATTTCTGAAGCTTTTCTTCACCCTTGCTCTTTGCTACCCATCTC
CCACCCCCCTCTTATAGCCCCATCCTTGTTCCTCCACCCCTAACTCATCC
CCGTCTCCTTCCTTACCCCCGTACCTTCATCCTTCCTCATTCCCATCTCC
TTCTTGGCCTCTCCTCTTATGGGTAGCAGGGGACTGGCCGCGTCACGGTG
AAGGGGTCTAAGAAGGGTTCTATCGCTCCAAAATACACGTGAGTCAGCCC
CTTTCTTAGTTTCCGCACCTGTCATCGGGGTGGTGTGCGTTTGTGTGTTT
GTGTGTGTGTGTGTGCGTGTGGCAGGGCCACCATGTCAATCTCCAGAGAG
ACGCTGACTTGTTAATTTTGCTTGCTCTCTTCTTCAGGACTCATCCTAAC
CCCAGCATGCCAGCAATGTCCGGAGAGATTGTCATCTCCCGTGAGGAGCA
GGCAATGCTGGATGCTGCCTGGTCCAAAGAGATGGATGAGGTACAGCTTT
CACTATGGATTATTATATTTCATTTACTTCGGTTGCTCAGTTACCCATTC
ATTCACAATTTGCTCAGGTTCTCCGGGAAGGAGTGTTGCGATATGGCGTT
TCCTGGGACATGGTTGCAGGTAGGGGAGCTAGAATTCTGAAAACTCTACC
CCTATGTTCTCGCCCATCAGTTGGAGCTCTTTGCTTCGTTCACTGTTCCC
TGAAGTCAACTCCTCTCAACTCTTCTCAACTCTTTTCAATGCTTGACCTG
ACATGCAGGGCACATGAGACCTGCAGATGTGACCGTGAAGCAGTGTGAAG
CGCGCTGGCAGATGGTGCGGAACAACCCTGTCAAGGGCCCATGGTGAGTG
AACCAGGACCAACAAACACATCCTTCATCCATCCATCCACCCATCCATCC
ATCCACCTGAATTGCGCAGCTACTAGTATGCTACAAATAGAAGTGTTACC
GAGTGGTCAGCGTTGGGCAGTTGGTGCAAGGATTAGTACGATTAGCATTA
GGGTTGACCTTGACTTTGCTTTGCTCGTGACACTCTCACTCATCTCACTC
TTAGGGCTACTGAGGAGGATGAGCTGCTTAGGCGACTTGTAGCCATCCAC
GGTTCCAAGAAGTGGTCACAGATAGCGCAGCAGTTTCCTGGCAGAAGGTG
CAGCTGCACTCCCTAATCTGTAGTCATACAAGCTAAGCTCTCACACGTAC
AAGCATAGCTCTCACTCATCAGTGTCTCACCTCCCTGCTCTTATCATTCA
CTTCATTTTGTTTTGTTTTGTTTTGTTTTGCTATACTCTCAGTGGCAAGC
AGTGTAGAGAAAGGTGGCTGAATCATCTTGACACAAGAGTGAAGAAGAGC
TTCTGGACTGAAGAAGAAGATAGAGTATTGTGTGAAGCCCAGAGGTGATT
TGAGCTGTGGCTGGCAATATTGGTTATGACTAATTCTGTTTAGTGGTGGC
TAATGGTGGTTAGTTAGCAAGTGCAACGGTTACTGCTTTCCTTCCTTTTC
TCCCAACATTCATTCTCTCCTTCCTCCTCTTTGCTCAATCTCAATCTCAA
CTTCCCATTTCTTCCTTCTCTGTTGTCTGTTCTCGGTTCTGCTAAAAAAG
GCGCCTGGGTAACAAATGGAGTGAGATCTCCAGGTTATTGCCAGGACGGG
CTGAGAACGCAGTCAAGAATAGGTTTAATAGTATTATCACAAAACGGCTT
AGTCAGGAGGTGAGAGCAAAGGAAAACTCAGCTCACTTTTTTCTTTCAAC
ACTGGTTATGCTTAAGCCTGGCCAATTAGCTCCATTGCTTAGCTTTAACT
TATAACCCTGAATGCAATGCAATGCATGTACTGTACTATGTATGGCAGCA
CGGAAACCACGCAGGTGCCGACTTCTTCGGGGGCCATCACAAAAAGGTCA
AGGTCAAGGTACCAGGGGGACGGGGGGGAGCTACCGGTGAGTCTAGTAGT
GGTCTCTTCCTAGTAACTTTGAGAAGTAATTCAGCCTAGTAGTAGCATAC
CTAACTGTTGTTAACTGTCTGCTGCTTGTGATGTGTTTTCATTTGCTGTC
CTCAGGTCGGCACAAACAAAGTAGCACGCACCTCCCACCGCCGCCTCCAG
TAAATTCTGCAAAGCGTGGTAACTCTGTGCCACAGCGAATCATCAGGGAG
GAAGAGCAAGACTATGGAAACCAGAATAGCCAGGTACAGCATTGAAATGC
ACGCCATGTAGCTACCTGGCTGCAGTCTGCAAGTAGCTGTATAGTTTGCT
CTCATCCACTCCTCCTAGTTGCTCACTTCCCTCAATCACTTTCTTTTCTT
TCCCAAATGGACAGGTTCTGGTTAACTCCATCTTCAAAACTTTAGCACGT
GGCAATAGCCCGCAAATCCCTCCTACCCCACCTCGTGAGAAGCCACCGCT
TATAGCTGCTGGTAGAGGCATGGCCACGCTGCCAACTTCGGATTCTCCTC
AGGTAAGCAAGAAAAAAAGAAAAAAAAAGAAAGAACAAACCTGTCAGTTC
TATTCCGTCACAGGGCCGGGCCCCCTCCCCTGGGAGTAACGTCCACTGGC
ATGATGATCCCTGAGTGACATGATCCCTGAGTAATGTTACTTACTCTCTC
CCCAGCGCATGCTCACTCTCAATGCCAGCTCCTTTGGCAACAAGGAGGGC
TTTTTGCAGCAAGACAATCAGAACCATTTGGCCATGAAGATGACGCGAGC
CCTGGTTGAAGAGGAGCGAAGGAGAGATGCGCTTTTCAAGGTCTATAGCT
GTTTCGCTTATGCTTTCTAGTTGTCAGAACTCGCTTGTCTCCTCTGCATC
AGTGATCATTCACCTAGAGCTGGCTCGCTTTAGCTATCGGTTAGCGAGTG
CACTTGGCTAAGAAATGGAGAACTGACTTGCTTTATCATGCATGTCATCA
TTTATTGTATGCCAGAGAGTTCAGCTCTCGGACGCTGAGCTTGCTCTGTT
GCAAAGTAACTTGAGGTAGGTCACTGTCCCATAACCTGACAGACTAGCTC
TCCCTCATCATACTCTTCAAGTCATGCCGACCTCACCTGAACATTCATTA
TTGTCCTATCAGTGTGCTGACCCGGCTTGCATTTTTCAATTTTCCAACCA
GTCTGGATGCCGGGGAAGCAGCTTTGCTAAGCATAAGTAACCCTGAGAAA
GACCTTGAGTCGTCGCCTAAGGACTGGACCAAGTGAGGAACTATTATATT
ACTACATGCTTGCACTACACACACTAGACACACTAGACCAAGCCCAAGCA
ATGCCTCCCCCTCATAATGTGGCTCTCCCTCATCTAATGCTCTCTCTCAT
CTCCTGCAGCGGGATACAGGTCAAGACTGAGGAGACTGCTGGAGACTTCC
CAATCCCTCCGTTACTGCTGCGTGTGTCCAACTCAAGCATTGGCTTTGAT
AAGGTAAGGTGTCTTGTACTTGTCTTGTCTGCCTGGCCGCATAAACAGCT
TGAAGAAACAGTTTGAACAGAATCTTTTTTTTTCTCCTGCTCCCTCCCCT
ATGCTATGTGTAGTAGGCCCCGTGCTCTCACACATCCTTCACCTGATGCT
CCTGCTCCTACTCTTGCTCCCGCTCCCGCTCATCAGGTGAAAACTGAGGA
TGTGATACCGCCACCTCTGGATATTGGCAGTCCAAATGTAGAGCTGGAGC
GGGCCTTTAATATGGATTCATTCAAAGGGGGTGGGAGACTTGGGCCATTC
AGCAAAAGTGGACTGGTAAGAAAGCTATGCCCAACTTGCTTTGTCATGGG
TCATGGGTCATGGGTGGGGGAAGAAAAGAAGCTGTTCTGTTCATTAGGAA
GCGAAGAAGTGAGAAGTGAACTCAACTCAGTCAACTCAGTCAGTGACTCG
AGAGAGTTACATTAGCTCACCAGTCCGCAAATCAATCACCACAATCACCA
CAGGAGGATGGCTTCAGTGACGTTGCACATGCGGCGGTCAATCGAAGTGA
TGGGAGGCATGGCTTGGCACGGAGCAGACGTCTTGGCTCGCTGTCAGAAC
TCACTCCAGGTGAAGCAAAGAAGCAAAGAAGCAAAGAAGCAAAGCACCTT
GCTTGCTTGGTTGGTCAGGCTAACCTTAGGGTTAGCTTAGCAGAGAGGGT
GGAACTCTGACACACGCACGGTTGTTAGTTTTGACCAACTAAATCATCCA
TCCCCCAGGTGGCTTGGGCAGTGAAAGCCTGGCGCTGCGAATGTCACTCA
ACAGCTTGTCACTTGATGACGATGACTGGAAGTTCCTTGCTCAGGAGGTA
ACCATGCCATGATGTTTGCTGTGATAGCTAACATATGAAAGGAGTACATA
CAATAGAATGCAATACAATGCTTCTTTGTTATTGTATTTATTGTATGTAT
TGTATTGGTTTTCTCTCCTCATCACAGGTGGACACCAAGACCCCATGCCT
CCCAAGCAAAGATGTGCCTATGGGAGCTCCAGGATCAAGGTACCCTCTCT
CTCCCCACCTTCTATAGAGCTGTTGATGATGAACCTTCCTCCTCCTCCTT
CTTCCAGCTCTTTTGGGGGTCACATGCTCTCGGCCTTCCCTGTGAGTGGT
GACAGGCTTAGACGTTCCCGAGCAAGCATGAAGAGTCCAGCCATGGGAGG
TATGAGCCCAATGGCACGGTACCTTCATGAGGTGGAGCAGATACCGGATC
CCGCACAGAGGTAAGAAGATAAGACAGCAGCAACAGTTGCTTGGGTGCTT
GGTTATGCTTACTGATGACAGCTATTCACAGTGAGTGAATGGCCAAAGTG
GTTAAGAGTTGAGCATAGAGTGATTGAATCAACAGCTAAAAGTCTAGCTG
CTCAGCTAGCTGCTTCTGATTTTTTTTTACTTAAAACATGTTTCAACCAT
CAGGCGGGAGAGGAAAGCTGCCCTGGTAGAAGCCTTCATAAATCAGGGTA
TGTGTTCCTTCCCTCAACCTCAACCTCAACCTCATCAACATTGTTTGTGT
TGCCAATTCCTGAGAGCAAATTCCTCACCACATCTTAACATTGGCCATGC
CAACGTTTGCTTTTGCCCTTTGCTTTCACGTAGATTGAAGGAGCTAGTGA
TGCAGTTGCTCATCTGTCGTGGTTCTGGAACGAGCAGCTTTTAGAGCGCT
TGGAGCAGCACTCATCCTGATTAAAGGCTTAATATAACATACTCTGATCC
CTGGGCAACAGCAACAACTAGAGAATGTACTCATTTTTATCCGCGTAATC
ATTCCATCGAAGTATCTTAGATAAGACCAGTTAGCTTGGAATTTCATCGT
TTTTACCGTAACTTGTTAGCTTCGAGTTTTCCTTCTTTTAC
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Coding sequence (CDS) from alignment at C-australica_Contig_1015:1812..7402-

>mRNA_C-australica_Contig_1015.2.1 ID=mRNA_C-australica_Contig_1015.2.1|Name=mRNA_C-australica_Contig_1015.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=2178bp|location=Sequence derived from alignment at C-australica_Contig_1015:1812..7402- (Chrysoparadoxa australica CS_1217)
ATGAAGAGAGATGTAGGGGCAATTGGGCAACCCTTGGGTAGCCCCTACGT
AATGCAGAGCAATAGGGCGAAGCAAAAGAAGGGGACTGGCCGCGTCACGG
TGAAGGGGTCTAAGAAGGGTTCTATCGCTCCAAAATACACGACTCATCCT
AACCCCAGCATGCCAGCAATGTCCGGAGAGATTGTCATCTCCCGTGAGGA
GCAGGCAATGCTGGATGCTGCCTGGTCCAAAGAGATGGATGAGGTTCTCC
GGGAAGGAGTGTTGCGATATGGCGTTTCCTGGGACATGGTTGCAGGGCAC
ATGAGACCTGCAGATGTGACCGTGAAGCAGTGTGAAGCGCGCTGGCAGAT
GGTGCGGAACAACCCTGTCAAGGGCCCATGGGCTACTGAGGAGGATGAGC
TGCTTAGGCGACTTGTAGCCATCCACGGTTCCAAGAAGTGGTCACAGATA
GCGCAGCAGTTTCCTGGCAGAAGTGGCAAGCAGTGTAGAGAAAGGTGGCT
GAATCATCTTGACACAAGAGTGAAGAAGAGCTTCTGGACTGAAGAAGAAG
ATAGAGTATTGTGTGAAGCCCAGAGGCGCCTGGGTAACAAATGGAGTGAG
ATCTCCAGGTTATTGCCAGGACGGGCTGAGAACGCAGTCAAGAATAGGTT
TAATAGTATTATCACAAAACGGCTTAGTCAGGAGCACGGAAACCACGCAG
GTGCCGACTTCTTCGGGGGCCATCACAAAAAGGTCAAGGTCAAGGTACCA
GGGGGACGGGGGGGAGCTACCGGTCGGCACAAACAAAGTAGCACGCACCT
CCCACCGCCGCCTCCAGTAAATTCTGCAAAGCGTGGTAACTCTGTGCCAC
AGCGAATCATCAGGGAGGAAGAGCAAGACTATGGAAACCAGAATAGCCAG
GTTCTGGTTAACTCCATCTTCAAAACTTTAGCACGTGGCAATAGCCCGCA
AATCCCTCCTACCCCACCTCGTGAGAAGCCACCGCTTATAGCTGCTGGTA
GAGGCATGGCCACGCTGCCAACTTCGGATTCTCCTCAGCGCATGCTCACT
CTCAATGCCAGCTCCTTTGGCAACAAGGAGGGCTTTTTGCAGCAAGACAA
TCAGAACCATTTGGCCATGAAGATGACGCGAGCCCTGGTTGAAGAGGAGC
GAAGGAGAGATGCGCTTTTCAAGAGAGTTCAGCTCTCGGACGCTGAGCTT
GCTCTGTTGCAAAGTAACTTGAGTCTGGATGCCGGGGAAGCAGCTTTGCT
AAGCATAAGTAACCCTGAGAAAGACCTTGAGTCGTCGCCTAAGGACTGGA
CCAACGGGATACAGGTCAAGACTGAGGAGACTGCTGGAGACTTCCCAATC
CCTCCGTTACTGCTGCGTGTGTCCAACTCAAGCATTGGCTTTGATAAGGT
GAAAACTGAGGATGTGATACCGCCACCTCTGGATATTGGCAGTCCAAATG
TAGAGCTGGAGCGGGCCTTTAATATGGATTCATTCAAAGGGGGTGGGAGA
CTTGGGCCATTCAGCAAAAGTGGACTGGAGGATGGCTTCAGTGACGTTGC
ACATGCGGCGGTCAATCGAAGTGATGGGAGGCATGGCTTGGCACGGAGCA
GACGTCTTGGCTCGCTGTCAGAACTCACTCCAGGTGGCTTGGGCAGTGAA
AGCCTGGCGCTGCGAATGTCACTCAACAGCTTGTCACTTGATGACGATGA
CTGGAAGTTCCTTGCTCAGGAGGTGGACACCAAGACCCCATGCCTCCCAA
GCAAAGATGTGCCTATGGGAGCTCCAGGATCAAGCTCTTTTGGGGGTCAC
ATGCTCTCGGCCTTCCCTGTGAGTGGTGACAGGCTTAGACGTTCCCGAGC
AAGCATGAAGAGTCCAGCCATGGGAGGTATGAGCCCAATGGCACGGTACC
TTCATGAGGTGGAGCAGATACCGGATCCCGCACAGAGGCGGGAGAGGAAA
GCTGCCCTGGTAGAAGCCTTCATAAATCAGGGTATGTGTTCCTTCCCTCA
ACCTCAACCTCAACCTCATCAACATTGTTTGTGTTGCCAATTCCTGAGAG
CAAATTCCTCACCACATCTTAACATTGGCCATGCCAACGTTTGCTTTTGC
CCTTTGCTTTCACGTAGATTGAAGGAGCTAGTGATGCAGTTGCTCATCTG
TCGTGGTTCTGGAACGAGCAGCTTTTAG
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