Homology
BLAST of mRNA_C-australica_Contig_1014.6.1 vs. uniprot
Match:
A0A7S4A4F3_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A4F3_9STRA)
HSP 1 Score: 169 bits (427), Expect = 7.360e-43
Identity = 111/363 (30.58%), Postives = 171/363 (47.11%), Query Frame = 3
Query: 159 RGYTVKRLWGLNEVGTFPFLESSGGMFRRSTPRPSGKADA-HWTTCRGLVLQGA-TGEDAWMKARFVVAGTLQQPNSHLFRRQLELCPDGSIATDDSLRTSHHSNNVYAVGDVCSFPLGPQFQQ----LQHGNQPAGGLIRSGSEHFAAEAGSYVADVMLRAHCEENPPFAPLPALSSTFGNESWCFAGVMAGEAVTLGLEDYRPTARSSTTAAPSSGSGSSSSPSALAVFWVIHSTIVGCYVHCAEVDYFQEVKRIAAERPGILSIKQLKKAKLHDLLADPYMLSPPPLGIGEFHADHDPCSMNEVLKEHESSPGKVPTRKLGDIMEALGADWDEHELKLALKGLDPQGQGEVAFDHFSGWW 1229
R + RLW ++E G FP +E +R+ PR +++TCRG+V++ + E +W+ A+ V+ +PNS +F L+L D SI D + RTSH S +V+AVGDV S+PL P+ ++ L H Q + + A PF P+P ++S + W F G GE V LG + +S FWV +VGC++ + ++IA RP + + + + + D LADP + PP LG GEF+A+ D + + G+ T+ +GD+M LGADWD E K AL+ LDP G +V+ + F+ WW
Sbjct: 295 REHRCLRLWDVDESGEFPTMEGPAISLQRTRPRRFEPLQGEYFSTCRGIVVENNHSAERSWIAAKCVILCLGDEPNSQVFSF-LDLADDSSIKVDATCRTSHSSGDVFAVGDVASYPL-PRSKERCMRLPHYQQAFSTAVYVAHQCIDAMKQPSRPGTRDSRRSIGGDPFDPVPCITSQVLDLDWVFYGRNVGECVPLGFDG--------------------NSDRYFGCFWVEDMRVVGCFLEGGSDEEKTICEKIAEMRPRLTRMHKFRSLECEDFLADPLGMEPPELGPGEFNAELD-AKYIAIAFDKYGRDGQAKTQAMGDLMRDLGADWDAEEEKEALRALDPLGSNQVSLECFTEWW 634
BLAST of mRNA_C-australica_Contig_1014.6.1 vs. uniprot
Match:
A0A7S3Y1G0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y1G0_HETAK)
HSP 1 Score: 89.7 bits (221), Expect = 4.740e-18
Identity = 47/115 (40.87%), Postives = 65/115 (56.52%), Query Frame = 3
Query: 909 IAAERPGILSIKQLKKAKLHDLLADPYMLSPPPLGIGEFHADHDPCSMNEVLKEHESSPGKVP--------TRKLGDIMEALGADWDEHELKLALKGLDPQGQGEVAFDHFSGWW 1229
+A +R + ++K L++ KL D LADP LSP L G+F A+ P ++EV E S P T KL ++M LGADW+E ELK A+K +DP G V++ FS WW
Sbjct: 8 VARDRVDVRTVKMLRRQKLEDFLADPRRLSPHDLAPGDFAAEASPHIVHEVFVEAASGNPPCPNTGGPQVKTEKLEEVMLELGADWNESELKTAIKSMDPLQTGLVSYQVFSNWW 122
BLAST of mRNA_C-australica_Contig_1014.6.1 vs. uniprot
Match:
A0A835HHJ1_9MAGN (Pyr_redox_2 domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835HHJ1_9MAGN)
HSP 1 Score: 58.5 bits (140), Expect = 1.140e-5
Identity = 57/209 (27.27%), Postives = 88/209 (42.11%), Query Frame = 3
Query: 336 MKARFVVAGTLQQPNSHLFRRQLELCPDGSIATDDSLRTSHHSNNVYAVGDVCSFPLG--PQFQQLQHGNQPAGGLIRSGSEHFAAEAGSYVADVMLRAHCEENPPFAPLPALSSTFGNESWCFAGVMAGEAVTLGLEDYRPTARSSTTAAPSSGSGSSSSPSALAVFWVIHSTIVGCYVHCAEVDYFQEVKRIAAERPGILSIKQLKK 956
+ A VV G +P + LF+ Q+E G I TD RTS +NVYAVGDV +FPL + ++++H A+E G + + + LP S + SW F G GEAV G D P P + GS +W+ +VG ++ + + + ++A +P + S+ QL K
Sbjct: 248 LDADIVVVGVGAKPLTTLFKGQVEE-DKGGIKTDAFFRTS--VSNVYAVGDVVTFPLKMYEEIRRVEHXXXXXXXXXXXXXXXXASEEGKTIDE------------YDYLPFFYSRSFDLSWQFYGDNVGEAVLFG--DSNPET-------PKAKFGS---------YWIKDGKVVGVFLESGSAEENKAIAKVAKLQPPVTSVDQLTK 423
BLAST of mRNA_C-australica_Contig_1014.6.1 vs. uniprot
Match:
I3S8J3_LOTJA (Pyr_redox_2 domain-containing protein n=1 Tax=Lotus japonicus TaxID=34305 RepID=I3S8J3_LOTJA)
HSP 1 Score: 55.1 bits (131), Expect = 6.010e-5
Identity = 53/212 (25.00%), Postives = 90/212 (42.45%), Query Frame = 3
Query: 336 MKARFVVAGTLQQPNSHLFRRQLELCPDGSIATDDSLRTSHHSNNVYAVGDVCSFPLG--PQFQQLQHGNQPAGGLIRSGSEHFAAEAGSYVADVMLRAHCEENPPFAPLPALSSTFGNESWCFAGVMAGEAVTLGLEDYRPTARSSTTAAPSSGSGSSSSPSALAVFWVIHSTIVGCYVHCAEVDYFQEVKRIAAERPGILSIKQLKKAKL 965
++A VV G +P + LF+ Q+E G I TD S +++ NVYAVGDV +FPL + ++++H + + AAE G V + + LP S + SW F G G+ V G D P +SS +W+ ++G ++ + + + ++A +P + ++ QL K L
Sbjct: 60 LEADLVVVGVGGRPLTSLFKGQVEE-EKGGIKTDSSFKSN--VPNVYAVGDVATFPLKLYDELRRVEHVDHARKSAEQXXXXXKAAEDGKTVEE------------YDYLPYFYSRSFDPSWQFYGDNVGDTVLFG--DNNP----------------ASSKPKFGTYWIKGGKVIGAFLEGGTPEENKAIAKVARVQPPVENVDQLAKEGL 238
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1014.6.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 4
0 1 Expect = 7.36e-43 / Id = 30.58 Expect = 4.74e-18 / Id = 40.87 Expect = 1.14e-5 / Id = 27.27 Expect = 6.01e-5 / Id = 25.00 Sequence A0A7S4A4F3_9STRA A0A7S3Y1G0_HETAK A0A835HHJ1_9MAGN I3S8J3_LOTJA back to top
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 1 Seed ortholog 2880.D7FRA9 Preferred name MDAR1 PFAMs Pyr_redox_2 Model size 1263 Max annot lvl 2759|Eukaryota KEGG ko ko:K08232 KEGG Reaction R00095 KEGG Pathway ko00053,ko01100,map00053,map01100 Hectar predicted targeting category other localisation GOs GO:0000166,GO:0001101,GO:0003674,GO:0003824,GO:0005488,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005739,GO:0005777,GO:0005778,GO:0005829,GO:0006950,GO:0006970,GO:0008144,GO:0008150,GO:0008152,GO:0009056,GO:0009266,GO:0009409,GO:0009414,GO:0009415,GO:0009507,GO:0009526,GO:0009532,GO:0009536,GO:0009570,GO:0009605,GO:0009607,GO:0009608,GO:0009610,GO:0009620,GO:0009628,GO:0009636,GO:0009651,GO:0009719,GO:0009725,GO:0009753,GO:0009941,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010043,GO:0010319,GO:0016020,GO:0016491,GO:0016651,GO:0016655,GO:0016656,GO:0016999,GO:0017001,GO:0017076,GO:0017144,GO:0030554,GO:0031090,GO:0031903,GO:0031967,GO:0031975,GO:0032553,GO:0032555,GO:0032559,GO:0035639,GO:0036094,GO:0042221,GO:0042579,GO:0042737,GO:0042743,GO:0042744,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043900,GO:0043903,GO:0044237,GO:0044248,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044438,GO:0044439,GO:0044444,GO:0044446,GO:0044464,GO:0046686,GO:0050789,GO:0050896,GO:0051186,GO:0051187,GO:0051704,GO:0051707,GO:0051716,GO:0055114,GO:0065007,GO:0070887,GO:0072593,GO:0097159,GO:0097237,GO:0097367,GO:0098588,GO:0098754,GO:0098805,GO:0098869,GO:1901265,GO:1901363,GO:1901700,GO:1990748 Exons 15 Evalue 2.52e-49 EggNOG OGs COG0446@1|root,KOG1336@2759|Eukaryota EC 1.6.5.4 Description monodehydroascorbate reductase (NADH) activity Cds size 1122 COG category J BRITE ko00000,ko00001,ko01000
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586748.9623063-UTR-C-australica_Contig_1014:8762..8862 1682586748.9623063-UTR-C-australica_Contig_1014:8762..8862 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_1014 8763..8862 + 1682586748.9747667-UTR-C-australica_Contig_1014:8975..8991 1682586748.9747667-UTR-C-australica_Contig_1014:8975..8991 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_1014 8976..8991 + 1682586749.1250937-UTR-C-australica_Contig_1014:11227..11252 1682586749.1250937-UTR-C-australica_Contig_1014:11227..11252 Chrysoparadoxa australica CS_1217 UTR C-australica_Contig_1014 11228..11252 +
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586748.9824896-CDS-C-australica_Contig_1014:8991..9116 1682586748.9824896-CDS-C-australica_Contig_1014:8991..9116 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 8992..9116 + 1682586748.9901874-CDS-C-australica_Contig_1014:9206..9276 1682586748.9901874-CDS-C-australica_Contig_1014:9206..9276 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 9207..9276 + 1682586749.0011835-CDS-C-australica_Contig_1014:9360..9409 1682586749.0011835-CDS-C-australica_Contig_1014:9360..9409 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 9361..9409 + 1682586749.0110924-CDS-C-australica_Contig_1014:9525..9600 1682586749.0110924-CDS-C-australica_Contig_1014:9525..9600 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 9526..9600 + 1682586749.0208094-CDS-C-australica_Contig_1014:9685..9765 1682586749.0208094-CDS-C-australica_Contig_1014:9685..9765 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 9686..9765 + 1682586749.0329776-CDS-C-australica_Contig_1014:9831..9951 1682586749.0329776-CDS-C-australica_Contig_1014:9831..9951 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 9832..9951 + 1682586749.0556114-CDS-C-australica_Contig_1014:10046..10174 1682586749.0556114-CDS-C-australica_Contig_1014:10046..10174 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 10047..10174 + 1682586749.0643373-CDS-C-australica_Contig_1014:10244..10355 1682586749.0643373-CDS-C-australica_Contig_1014:10244..10355 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 10245..10355 + 1682586749.07238-CDS-C-australica_Contig_1014:10425..10507 1682586749.07238-CDS-C-australica_Contig_1014:10425..10507 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 10426..10507 + 1682586749.080593-CDS-C-australica_Contig_1014:10575..10636 1682586749.080593-CDS-C-australica_Contig_1014:10575..10636 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 10576..10636 + 1682586749.0882175-CDS-C-australica_Contig_1014:10706..10775 1682586749.0882175-CDS-C-australica_Contig_1014:10706..10775 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 10707..10775 + 1682586749.0972948-CDS-C-australica_Contig_1014:10840..10885 1682586749.0972948-CDS-C-australica_Contig_1014:10840..10885 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 10841..10885 + 1682586749.1066434-CDS-C-australica_Contig_1014:10976..11032 1682586749.1066434-CDS-C-australica_Contig_1014:10976..11032 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 10977..11032 + 1682586749.1153188-CDS-C-australica_Contig_1014:11176..11227 1682586749.1153188-CDS-C-australica_Contig_1014:11176..11227 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_1014 11177..11227 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1014.6.1
>prot_C-australica_Contig_1014.6.1 ID=prot_C-australica_Contig_1014.6.1|Name=mRNA_C-australica_Contig_1014.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=374bp
MHSTHHLWYSTALHRGYTVKRLWGLNEVGTFPFLESSGGMFRRSTPRPSG back to top mRNA from alignment at C-australica_Contig_1014:8763..11252+
Legend: UTR polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1014.6.1 ID=mRNA_C-australica_Contig_1014.6.1|Name=mRNA_C-australica_Contig_1014.6.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2490bp|location=Sequence derived from alignment at C-australica_Contig_1014:8763..11252+ (Chrysoparadoxa australica CS_1217)GCAAATCAAGTTCACCTTCACTCACAGGCGACAGATCACAACTAGTGAAG
CAAATACATCCTCACTCATAGACTTCCGCCCCCCATCGAAGGGACGAAAG
GCCTTCCTAAGGACGTGGTGGCTGTGTATGAGAGGATGCTCACAAGGGCT
GGGGTGGCAATAGCAAAGTCAGTCTGATCCCATAAACACCAAACACCAAA
GACTTACCAAAAGACTTACCAAATGCTTA ATGCATTCCACTCACCACCTT
TGGTACTCCACCGCACTACACAGAGGCTACACAGTGAAGCGCCTCTGGGG
CTTAAATGAAGTTGGCACGTTCCCATTTCTCGAGAGCAGTGGCGGAATGT
TCAG GTCCGAGTCTGCGCTGGAGGCAGCCAGCCTTGTCATTTCACGAGCT
ACCCACACACCTGACGCATGCTATGCTTATCCATGCTGTTGCAGGAGATC
TACTCCTCGGCCTAGTGGCAAAGCAGATGCTCACTGGACTACTTGCAGAG
GACTGGTGCTTCAG GTAGGGGGATAGGCTAGAAGTGAGAGAGAGCGACCA
ATATTTTTTACGTGCCACTGTTCCGTTTCCCTTTCGGTTGGACTCCAGGG
AGCGACTGGGGAAGATGCATGGATGAAGGCCAGGTTTGTGGTGGCAG GTG
AGTGGTTTGTTAGGCCAGAAATGAAAAGGTTCTGGGCTGAGTTGGGCTTG
GGTTGGGTTTGCCCTGCAACGTTTTGCTTGTCATAACGTACAGGTGCTTT
CCGGACACTTCAGGCACCCTCCAGCAGCCAAACAGTCACCTCTTCCGCAG
ACAGCTTGAGCTGTGCCCTGATGGCTCTATTGCAACCG GTGAGGAATAGG
AATCAAGTAGACGGGCGCCAATAACACCATATTGTATGGCTTACACACCA
CTTCCTTCCTTTGTTTCTCTCAGATGATTCTCTGCGAACTTCACACCACT
CCAACAACGTGTACGCAGTGGGGGATGTGTGCTCTTTCCCATTGGGGCCA
CAG GTCTGGCTGGTACTGCAATGGATAAAGCCATCAAAGCAGGCCACTCA
TTCACTCACTTTCCCCTAGTTTCAGCAACTGCAGCATGGGAATCAGCCTG
CTGGGGGACTCATCAGGTCTGGGTCAGAGCACTTTGCTGCAGAGGCAGGC
TCATACGTAGCTGACGTAATGCTGCGCGCACACTGCGAG GTAGTCTAACT
TAAGGGGGAGCTTCATCACCTCGGAGCCACTAGCTCAGACATCTATATAT
ATACACACACATAACCTTTGTCCCCATCCCCCAGGAAAACCCACCCTTTG
CCCCGCTACCAGCACTGTCCTCAACCTTTGGGAATGAGTCGTGGTGCTTT
GCCGGCGTCATGGCTGGGGAAGCAGTAACTCTGGGTCTAGAGGACTACAG
GCCAACCGCAAG GTAATGACGGGGAAGAAGCTGTGCGTGACTTGCCACCT
AACCTCACCCAACCTTCACCAACTAATGATAGATCAAGCACCACTGCGGC
ACCTAGCAGTGGCAGTGGCAGCTCTTCCTCACCCAGCGCCTTGGCTGTGT
TCTGGGTCATACACTCAACCATTGTGGGCTGCTACGTTCACTG GTACAGC
TTAAAGCTTGTGTGTGTTGTGAGCAGATAACAAGCTTCCTTCCTAACCTG
ACTTGCCCTCCAGTGCTGAGGTGGACTACTTCCAAGAAGTGAAGCGCATT
GCCGCCGAGAGGCCAGGCATCCTCAGCATCAAGCAGCTCAAGAAG GTGAC
TGGTTACTACACAGCTGGGGAGACTGCATGGACTGACTGATCTTGCGCCG
CCTGCCCCACTAGGCAAAGCTTCATGATTTATTAGCCGACCCATACATGT
TGTCCCCGCCACCTCTTGGGATAG GCAAGTGCCATGACTGCTTGCTCCAC
CCACGCTACCACTCTCTCAGTCAGTCTCTCCCTCGTCATCTCAGGCGAGT
TCCATGCTGATCATGACCCCTGCAGCATGAATGAGGTCCTCAAAGAGCAC
GAGTCTTCGCCCG GTAAGAGGAAGGCACCATGGCCTTATGACTTTCTTAC
TCACATGCATTCCACTTTGGCTCTGCAGGAAAAGTTCCCACGCGAAAGCT
GGGAGATATCATGGAGGCCTTGG GTAACCTGAAACATATCATCTTGCTTT
TTCCTGGCTTCAGTGATCCTACTAGCTATGCTCCTGACTTGACTTGACAC
TATCCTGGATCCAGGTGCTGACTGGGATGAGCATGAGCTGAAGCTTGCGC
TCAAAGGGCTTGACCCCCAG GTGAGGGAAGTGTTTCTTGCTAAGCAACTC
CATGGCAGTGGTCCCTCAGTACAAGAAGAAACACGACAGCCAAAGCTCCC
CATCCAGCCTTCATCCACATTGTGACTTGCACTTCTTCACCGCTCTTTTT
TCGCTCAAACGCAGGGCCAAGGGGAAGTGGCATTTGATCATTTCTCAGGC
TGGTGGAGGGGTTGA TGTAGATACAACATGCTTTGGAAGC back to top Coding sequence (CDS) from alignment at C-australica_Contig_1014:8763..11252+
>mRNA_C-australica_Contig_1014.6.1 ID=mRNA_C-australica_Contig_1014.6.1|Name=mRNA_C-australica_Contig_1014.6.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1122bp|location=Sequence derived from alignment at C-australica_Contig_1014:8763..11252+ (Chrysoparadoxa australica CS_1217) back to top