Homology
BLAST of mRNA_C-australica_Contig_10133.1.1 vs. uniprot
Match:
H8W6J2_MARN1 (Uncharacterized protein n=7 Tax=Marinobacter nauticus TaxID=2743 RepID=H8W6J2_MARN1)
HSP 1 Score: 70.9 bits (172), Expect = 1.480e-14
Identity = 38/60 (63.33%), Postives = 41/60 (68.33%), Query Frame = -1
Query: 46 MR*KARIIAKLAAKYRALAFFVNGRVGKTHNLTLAVNQGYPE*QRIRAGKGFVNPPYSWL 225
MR KARIIAKLAAKYRA AFFVN KT N VN+GYPE + A GFVN PY W+
Sbjct: 1 MRQKARIIAKLAAKYRASAFFVNALAEKTANFFPFVNEGYPEYRAPGAEIGFVNKPYRWV 60
BLAST of mRNA_C-australica_Contig_10133.1.1 vs. uniprot
Match:
UPI001C96F196 (hypothetical protein n=3 Tax=Marinobacter daepoensis TaxID=262077 RepID=UPI001C96F196)
HSP 1 Score: 68.6 bits (166), Expect = 1.210e-13
Identity = 38/60 (63.33%), Postives = 40/60 (66.67%), Query Frame = -1
Query: 46 MR*KARIIAKLAAKYRALAFFVNGRVGKTHNLTLAVNQGYPE*QRIRAGKGFVNPPYSWL 225
MR KARIIAKLAAKYRA A FVN RV KT L VN+GYPE Q FVN PY W+
Sbjct: 1 MRQKARIIAKLAAKYRASASFVNARVLKTAKLFPRVNEGYPEYQAAAGEIVFVNKPYRWV 60
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10133.1.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 vs UniRef90 )
Total hits: 2
0 1 Expect = 1.48e-14 / Id = 63.33 Expect = 1.21e-13 / Id = 63.33 Sequence H8W6J2_MARN1 UPI001C96F196
Match Name E-value Identity Description
H8W6J2_MARN1 1.480e-14 63.33 Uncharacterized protein n=7 Tax=Marinobacter nauti... [more] UPI001C96F196 1.210e-13 63.33 hypothetical protein n=3 Tax=Marinobacter daepoens... [more]
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Stop 1 Start 0 Model size 231 Hectar predicted targeting category other localisation Exons 1 Cds size 231
Relationships
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1682586748.4085894-CDS-C-australica_Contig_10133:8..239 1682586748.4085894-CDS-C-australica_Contig_10133:8..239 Chrysoparadoxa australica CS_1217 CDS C-australica_Contig_10133 9..239 +
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10133.1.1
>prot_C-australica_Contig_10133.1.1 ID=prot_C-australica_Contig_10133.1.1|Name=mRNA_C-australica_Contig_10133.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=77bp
ITNVQRRSGRVFQGVKPAIRRIDKSFSCPNPLSFGISLIYSQCQIMGFPD back to top mRNA from alignment at C-australica_Contig_10133:9..239+
Legend: CDS polypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10133.1.1 ID=mRNA_C-australica_Contig_10133.1.1|Name=mRNA_C-australica_Contig_10133.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=231bp|location=Sequence derived from alignment at C-australica_Contig_10133:9..239+ (Chrysoparadoxa australica CS_1217)ATTACAAACGTGCAACGTCGCTCAGGCCGCGTATTTCAGGGGGTTAAGCC
AGCTATAAGGAGGATTGACAAATCCTTTTCCTGCCCGAATCCGTTGTCAT
TCGGGATATCCCTGATTTACAGCCAATGTCAAATTATGGGTTTTCCCGAC
TCTTCCATTGACAAAAAAAGCCAACGCCCTATATTTTGCCGCCAGTTTTG
CGATAATACGCGCCTTCTAGCGCATCTATAA back to top Coding sequence (CDS) from alignment at C-australica_Contig_10133:9..239+
>mRNA_C-australica_Contig_10133.1.1 ID=mRNA_C-australica_Contig_10133.1.1|Name=mRNA_C-australica_Contig_10133.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=231bp|location=Sequence derived from alignment at C-australica_Contig_10133:9..239+ (Chrysoparadoxa australica CS_1217) back to top