mRNA_C-australica_Contig_10132.2.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Match: A0A3D5S1X8_9BACT (Arginine decarboxylase n=3 Tax=Bacteria TaxID=2 RepID=A0A3D5S1X8_9BACT) HSP 1 Score: 238 bits (607), Expect = 1.470e-74 Identity = 110/141 (78.01%), Postives = 129/141 (91.49%), Query Frame = 1 Query: 1 MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPKISENIQFAKKIFNDAITKLNYKGSYTYCYCTKSSHFQFVLAEGLKNDIHLETSSAFDIPIVERLYETGHIKKDKFIVCNGFKRHLYLENI 423 MKSY+DLIEQTFYFP+KEFRVEN+Q++FHDVNLM II++YGTPLKL+YLPKIS+NIQFAKKIFNDAI K Y+G+Y+YCYCTKSSHF+FVL EGL+NDIHLETSSA+DIPI+ RL ETGH KD+ +VCNGFKR LYL+ I Sbjct: 1 MKSYADLIEQTFYFPTKEFRVENNQLWFHDVNLMEIIEQYGTPLKLSYLPKISQNIQFAKKIFNDAIAKNKYEGTYSYCYCTKSSHFKFVLEEGLRNDIHLETSSAYDIPIIRRLNETGHFSKDRMVVCNGFKRPLYLQYI 141
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Match: A0A3D9L8Q1_MARFU (Arginine decarboxylase n=1 Tax=Marinoscillum furvescens DSM 4134 TaxID=1122208 RepID=A0A3D9L8Q1_MARFU) HSP 1 Score: 233 bits (594), Expect = 1.310e-72 Identity = 111/141 (78.72%), Postives = 127/141 (90.07%), Query Frame = 1 Query: 1 MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPKISENIQFAKKIFNDAITKLNYKGSYTYCYCTKSSHFQFVLAEGLKNDIHLETSSAFDIPIVERLYETGHIKKDKFIVCNGFKRHLYLENI 423 MKSYSDLIEQTFYFP+KEFRVENDQ+ FHDV+LM II++YGTPLKLTYLPKISENIQFAK+IF DAI K NY+GSYTYCYCTKSSHFQFVLAE LKNDIH+ETSSA+DIPIV L+ +G I K+K +VCNG+KR LY++ I Sbjct: 1 MKSYSDLIEQTFYFPTKEFRVENDQLKFHDVDLMEIIRQYGTPLKLTYLPKISENIQFAKQIFGDAIKKHNYEGSYTYCYCTKSSHFQFVLAEALKNDIHIETSSAYDIPIVRHLHASGLIDKNKMVVCNGYKRPLYVQYI 141
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Match: A0A654DUS2_9BACT (Arginine decarboxylase n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654DUS2_9BACT) HSP 1 Score: 228 bits (582), Expect = 8.260e-71 Identity = 110/141 (78.01%), Postives = 124/141 (87.94%), Query Frame = 1 Query: 1 MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPKISENIQFAKKIFNDAITKLNYKGSYTYCYCTKSSHFQFVLAEGLKNDIHLETSSAFDIPIVERLYETGHIKKDKFIVCNGFKRHLYLENI 423 MKSYSDLIEQTFYFP+KEFRVEN+ ++FHDVNLM IIKEYGTPLKL+YLPKISENIQFAKKIF DAI K +Y G+Y YCYCTKSSHFQFVL E LKNDIH+ETSSA+DIPIV L ++G + KD+ IVCNGFKR LYL+ I Sbjct: 1 MKSYSDLIEQTFYFPTKEFRVENNLLWFHDVNLMEIIKEYGTPLKLSYLPKISENIQFAKKIFTDAIQKNSYDGTYRYCYCTKSSHFQFVLEEALKNDIHIETSSAYDIPIVRNLNKSGLLSKDRMIVCNGFKRPLYLQYI 141
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Match: A0A5E8A957_9BACT (Biosynthetic arginine decarboxylase n=1 Tax=Imperialibacter sp. EC-SDR9 TaxID=2038371 RepID=A0A5E8A957_9BACT) HSP 1 Score: 216 bits (549), Expect = 7.330e-66 Identity = 101/141 (71.63%), Postives = 120/141 (85.11%), Query Frame = 1 Query: 1 MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPKISENIQFAKKIFNDAITKLNYKGSYTYCYCTKSSHFQFVLAEGLKNDIHLETSSAFDIPIVERLYETGHIKKDKFIVCNGFKRHLYLENI 423 MKSY DLI+QTF FP++EFRVEN+Q+ F++VNLM++I++YGTPLKLTYLPKISE IQ+AK+IFN+AI K Y G YTYCYCTKSSHF FVL E LKNDIH+ETSSA+DIPIV L+E G I KD F+VCNGFKR LY E + Sbjct: 1 MKSYFDLIDQTFEFPTEEFRVENNQLLFNEVNLMDVIEQYGTPLKLTYLPKISERIQYAKEIFNNAIAKHKYGGKYTYCYCTKSSHFSFVLEEALKNDIHIETSSAYDIPIVRNLFEKGKISKDTFVVCNGFKRPLYTEYV 141
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Match: UPI00197AFA76 (arginine decarboxylase n=2 Tax=Fulvivirga TaxID=396811 RepID=UPI00197AFA76) HSP 1 Score: 212 bits (540), Expect = 1.580e-64 Identity = 100/141 (70.92%), Postives = 117/141 (82.98%), Query Frame = 1 Query: 1 MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPKISENIQFAKKIFNDAITKLNYKGSYTYCYCTKSSHFQFVLAEGLKNDIHLETSSAFDIPIVERLYETGHIKKDKFIVCNGFKRHLYLENI 423 MK Y DLIEQTFYFP KEF+V ND++ FHDV LM+IIK+YGTPLKLTYLPKI ENI++AKK+F DA K Y+GSYTYCYCTKSSHF F+L E L NDIH+ETSS++DIPIV +L+E G I K+ +IVCNGFKR LY E I Sbjct: 1 MKKYVDLIEQTFYFPQKEFQVINDELHFHDVPLMDIIKKYGTPLKLTYLPKIGENIRYAKKLFADAFEKHKYEGSYTYCYCTKSSHFNFILEEALNNDIHIETSSSYDIPIVRKLHEKGKINKNTYIVCNGFKRPLYREYI 141
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Match: A0A6C0GWY4_9BACT (Arginine decarboxylase n=1 Tax=Rhodocytophaga rosea TaxID=2704465 RepID=A0A6C0GWY4_9BACT) HSP 1 Score: 210 bits (534), Expect = 1.240e-63 Identity = 98/137 (71.53%), Postives = 120/137 (87.59%), Query Frame = 1 Query: 1 MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPKISENIQFAKKIFNDAITKLNYKGSYTYCYCTKSSHFQFVLAEGLKNDIHLETSSAFDIPIVERLYETGHIKKDKFIVCNGFKRHLY 411 M+SY DLIEQTF FP++EFRV N++++F++V LM+IIKEYGTPLKLTYLPKISE+IQ+AK+IFN+AI K YKGSYTYCYCTKSSHFQFVL E LKN+IHLETSSA+DI IV L++ G I KD +++CNG+KR LY Sbjct: 1 MQSYIDLIEQTFDFPTEEFRVVNNELYFNEVPLMDIIKEYGTPLKLTYLPKISEHIQYAKEIFNNAIKKFRYKGSYTYCYCTKSSHFQFVLEEALKNNIHLETSSAYDIAIVNELFKRGKISKDTYVICNGYKRELY 137
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Match: A0A1W2GBA2_9BACT (Arginine decarboxylase n=1 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2GBA2_9BACT) HSP 1 Score: 209 bits (532), Expect = 2.420e-63 Identity = 101/141 (71.63%), Postives = 118/141 (83.69%), Query Frame = 1 Query: 1 MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPKISENIQFAKKIFNDAITKLNYKGSYTYCYCTKSSHFQFVLAEGLKNDIHLETSSAFDIPIVERLYETGHIKKDKFIVCNGFKRHLYLENI 423 MK Y DLI+QTFYFP++EF V+N+Q+FF+ VNLMNIIKE+GTPLKLTYLPKISENIQ AK IF +AI K Y GSYTYCYCTKS+HF FVL E LKN+IH+ETSSA+DI IVE L+E G I KD +I+CNG+KR YLE I Sbjct: 1 MKKYRDLIDQTFYFPTQEFDVKNNQLFFNGVNLMNIIKEHGTPLKLTYLPKISENIQNAKAIFAEAIKKKKYNGSYTYCYCTKSNHFSFVLEEALKNNIHIETSSAYDISIVEALFERGLITKDTYIICNGYKRPHYLEKI 141
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Match: UPI001F1E0831 (arginine decarboxylase n=2 Tax=Fulvivirga TaxID=396811 RepID=UPI001F1E0831) HSP 1 Score: 209 bits (531), Expect = 3.650e-63 Identity = 98/141 (69.50%), Postives = 120/141 (85.11%), Query Frame = 1 Query: 1 MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPKISENIQFAKKIFNDAITKLNYKGSYTYCYCTKSSHFQFVLAEGLKNDIHLETSSAFDIPIVERLYETGHIKKDKFIVCNGFKRHLYLENI 423 MK Y DLIEQTF FP +EF+VEN+++FF+ V LM+II++YGTPLKL+YLPKISENI +AKKIF++A+ K NY+GSYTYCYCTKSSHF FVL E LKNDIH+ETSS+FDIPIV +L+E + KD F+VCNGFKR LY + I Sbjct: 1 MKKYIDLIEQTFEFPQEEFKVENNELFFNGVPLMDIIEKYGTPLKLSYLPKISENINYAKKIFSNAMKKHNYEGSYTYCYCTKSSHFNFVLEEALKNDIHIETSSSFDIPIVRKLHEENKVTKDTFVVCNGFKRPLYKQYI 141
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Match: UPI00047B8D9B (decarboxylase n=1 Tax=Eisenibacter elegans TaxID=997 RepID=UPI00047B8D9B) HSP 1 Score: 208 bits (530), Expect = 4.690e-63 Identity = 94/141 (66.67%), Postives = 122/141 (86.52%), Query Frame = 1 Query: 1 MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPKISENIQFAKKIFNDAITKLNYKGSYTYCYCTKSSHFQFVLAEGLKNDIHLETSSAFDIPIVERLYETGHIKKDKFIVCNGFKRHLYLENI 423 MKSY DLIEQTF FP+KEF+VE +++FF+++ LM+II+EYGTPLK+TYLPKISE+IQ+AKKIF DA+ K NY+G Y YCYCTK+SHF+FVL E LKND+H+ETSS++DIPIV+ LY++ I KD +++CNGFKR LY + I Sbjct: 1 MKSYIDLIEQTFDFPTKEFKVEQNELFFNNIPLMDIIEEYGTPLKVTYLPKISEHIQYAKKIFKDAMKKYNYQGDYVYCYCTKASHFKFVLEESLKNDVHIETSSSYDIPIVKHLYKSNKITKDTYVICNGFKRPLYTQYI 141
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Match: A0A074KY19_9BACT (Decarboxylase n=1 Tax=Anditalea andensis TaxID=1048983 RepID=A0A074KY19_9BACT) HSP 1 Score: 207 bits (528), Expect = 9.330e-63 Identity = 100/141 (70.92%), Postives = 118/141 (83.69%), Query Frame = 1 Query: 1 MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPKISENIQFAKKIFNDAITKLNYKGSYTYCYCTKSSHFQFVLAEGLKNDIHLETSSAFDIPIVERLYETGHIKKDKFIVCNGFKRHLYLENI 423 M Y+DLI+QTF FP+KEF VE++++ F+ V+LMNII+EYGTPLKLTYLPKISENIQ AK IFN+AI +YKG+YTYCYCTKSSHF FV+ E LKNDIH+ETSS+FDIPIV LYE G I KD +IVCNGFKR LY + I Sbjct: 1 MNKYADLIQQTFDFPTKEFHVEDNKLHFNGVDLMNIIEEYGTPLKLTYLPKISENIQNAKTIFNNAIKSHDYKGNYTYCYCTKSSHFSFVMDEALKNDIHIETSSSFDIPIVRNLYERGKITKDTYIVCNGFKRDLYKKYI 141 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10132.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10132.2.1 >prot_C-australica_Contig_10132.2.1 ID=prot_C-australica_Contig_10132.2.1|Name=mRNA_C-australica_Contig_10132.2.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=141bp MKSYSDLIEQTFYFPSKEFRVENDQIFFHDVNLMNIIKEYGTPLKLTYLPback to top mRNA from alignment at C-australica_Contig_10132:412..834+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10132.2.1 ID=mRNA_C-australica_Contig_10132.2.1|Name=mRNA_C-australica_Contig_10132.2.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=423bp|location=Sequence derived from alignment at C-australica_Contig_10132:412..834+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10132:412..834+ >mRNA_C-australica_Contig_10132.2.1 ID=mRNA_C-australica_Contig_10132.2.1|Name=mRNA_C-australica_Contig_10132.2.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=423bp|location=Sequence derived from alignment at C-australica_Contig_10132:412..834+ (Chrysoparadoxa australica CS_1217)back to top |