mRNA_C-australica_Contig_10132.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10132.1.1
Unique NamemRNA_C-australica_Contig_10132.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Match: A0A848V032_9FLAO (Amidinotransferase n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A848V032_9FLAO)

HSP 1 Score: 120 bits (301), Expect = 2.640e-31
Identity = 61/93 (65.59%), Postives = 71/93 (76.34%), Query Frame = 1
Query:    1 MIKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVESDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVIG 279
            MI + I DETAPLEAVILGTA+SFGG P +D T DPKS EHI  GTFP E DL+ EMEGV AV + + V VYR E+I +YNQI SRD+ +VIG
Sbjct:    1 MIPVKILDETAPLEAVILGTAKSFGGTPALDETTDPKSREHIRKGTFPQEKDLIVEMEGVVAVLEKHGVKVYRPEIIEDYNQIFSRDIALVIG 93          
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Match: A0A3D5S2N2_9BACT (Amidinotransferase n=3 Tax=Bacteria TaxID=2 RepID=A0A3D5S2N2_9BACT)

HSP 1 Score: 118 bits (296), Expect = 1.460e-30
Identity = 55/92 (59.78%), Postives = 73/92 (79.35%), Query Frame = 1
Query:    1 MIKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVESDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVI 276
            MIKL I DET+PLEAV+LGTA+SFGG P +++  DPKS EHI DGT+P+E D+++EM+  +AVF+ YDV VYR E+I + NQI +RD+  VI
Sbjct:    1 MIKLNIKDETSPLEAVVLGTAQSFGGTPKLEDAYDPKSAEHIKDGTYPLEEDMVREMDAFNAVFEKYDVKVYRPEMIRDLNQIFTRDIAFVI 92          
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Match: A0A238XZ59_9FLAO (N-Dimethylarginine dimethylaminohydrolase n=1 Tax=Lutibacter flavus TaxID=691689 RepID=A0A238XZ59_9FLAO)

HSP 1 Score: 115 bits (288), Expect = 2.240e-29
Identity = 55/92 (59.78%), Postives = 71/92 (77.17%), Query Frame = 1
Query:    1 MIKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVESDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVI 276
            MIKL + DET+ L AVILG AES G +P +++  DPKS+EHI  GT+P+E D+++EME ++ VFK YDV VYR +VIPNYNQI SRD+  VI
Sbjct:    1 MIKLNVQDETSRLRAVILGIAESNGPIPKVEDAYDPKSIEHIKAGTYPLEKDMIQEMEALNKVFKKYDVKVYRPKVIPNYNQIFSRDIAFVI 92          
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Match: A0A1W2GAW8_9BACT (N-Dimethylarginine dimethylaminohydrolase n=1 Tax=Reichenbachiella faecimaris TaxID=692418 RepID=A0A1W2GAW8_9BACT)

HSP 1 Score: 115 bits (287), Expect = 3.210e-29
Identity = 55/93 (59.14%), Postives = 70/93 (75.27%), Query Frame = 1
Query:    1 MIKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVESDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVIG 279
            MI + I DETAPL++V+LGT ESFGGVP ++   DPKS EHILDGTFP E D++ EME V +  K Y V+VYR EV+ + NQ+ +RD+G VIG
Sbjct:    1 MINILIKDETAPLKSVVLGTGESFGGVPAIEEAYDPKSREHILDGTFPKEEDIINEMEAVASALKKYGVEVYRPEVLSDTNQVFARDIGFVIG 93          
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Match: A0A1B8TWS9_9FLAO (Amidinotransferase n=1 Tax=Polaribacter reichenbachii TaxID=996801 RepID=A0A1B8TWS9_9FLAO)

HSP 1 Score: 114 bits (285), Expect = 6.220e-29
Identity = 55/92 (59.78%), Postives = 70/92 (76.09%), Query Frame = 1
Query:    1 MIKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVESDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVI 276
            MIKL + +ET+ L AV+LGTAES GG+P +++  DPKS+EH+L GT+P E D++KEME V  V + YDV VYR EVI NYNQI SRD+  VI
Sbjct:    1 MIKLNVNNETSRLRAVVLGTAESNGGIPKVEDCYDPKSIEHVLAGTYPKEEDMVKEMESVAQVLEKYDVKVYRPEVIENYNQIFSRDIAFVI 92          
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Match: A0A6L6UAV5_9FLAO (Amidinotransferase n=1 Tax=Winogradskyella endarachnes TaxID=2681965 RepID=A0A6L6UAV5_9FLAO)

HSP 1 Score: 114 bits (284), Expect = 8.580e-29
Identity = 57/91 (62.64%), Postives = 70/91 (76.92%), Query Frame = 1
Query:    4 IKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVESDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVI 276
            +KL I +ET+ L+AVILGTAES G +P + +  DPKSV+HI  GT+P ESD++ EME VDAVFK YDV VYR +VI NYNQI SRD+  VI
Sbjct:    1 MKLNIKNETSRLKAVILGTAESVGEIPSIQDAYDPKSVQHIKAGTYPKESDMVMEMEAVDAVFKKYDVKVYRPKVIKNYNQIFSRDIAFVI 91          
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Match: A0A7Y3HU65_9FLAO (Amidinotransferase n=1 Tax=Croceitalea sp. TaxID=1912138 RepID=A0A7Y3HU65_9FLAO)

HSP 1 Score: 114 bits (284), Expect = 8.750e-29
Identity = 57/92 (61.96%), Postives = 70/92 (76.09%), Query Frame = 1
Query:    1 MIKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVESDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVI 276
            M++L I DETAPL+AVILGTAES G  P  +   DPKS+EHIL GT+P E+D++KEMEG + VFK YDV VYR EV+ + NQI SRD+  VI
Sbjct:    1 MLQLNIIDETAPLKAVILGTAESCGPTPRPEEAYDPKSLEHILAGTYPKEADMVKEMEGFNQVFKKYDVTVYRPEVLKDCNQIFSRDIAFVI 92          
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Match: UPI001F35E1AB (arginine deiminase family protein n=1 Tax=Gillisia sp. M10.2A TaxID=2909668 RepID=UPI001F35E1AB)

HSP 1 Score: 113 bits (283), Expect = 1.230e-28
Identity = 56/92 (60.87%), Postives = 70/92 (76.09%), Query Frame = 1
Query:    1 MIKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVESDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVI 276
            M+KL I  ETAPL+AV+LGTAES GG P  ++  DPKS E+I  GT+PVE D++KEME V AVFK YDV V+R +VI +YNQI +RD+  VI
Sbjct:    1 MLKLNITSETAPLKAVVLGTAESNGGTPAYEDAYDPKSAEYIKAGTYPVEEDMVKEMEAVAAVFKKYDVQVFRPKVIEDYNQIFTRDIAFVI 92          
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Match: A0A239CBX7_9FLAO (N-Dimethylarginine dimethylaminohydrolase n=1 Tax=Dokdonia pacifica TaxID=1627892 RepID=A0A239CBX7_9FLAO)

HSP 1 Score: 113 bits (282), Expect = 1.730e-28
Identity = 54/92 (58.70%), Postives = 71/92 (77.17%), Query Frame = 1
Query:    1 MIKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVESDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVI 276
            M+KL + DET+ L AVILGTAES G  P +++  DPKS +HI DGT+P+E D++KEM+ V AVF+ YDV V+R EV+ +YNQI SRD+G VI
Sbjct:    1 MLKLHVNDETSRLRAVILGTAESCGPTPKIEDAYDPKSAQHIKDGTYPLEKDMVKEMDAVAAVFEKYDVQVFRPEVLKDYNQIFSRDIGFVI 92          
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Match: A0A2E4HHS0_9BACT (Amidinotransferase n=1 Tax=Cytophagaceae bacterium TaxID=2026729 RepID=A0A2E4HHS0_9BACT)

HSP 1 Score: 112 bits (281), Expect = 2.430e-28
Identity = 56/92 (60.87%), Postives = 69/92 (75.00%), Query Frame = 1
Query:    1 MIKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVESDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVI 276
            M+KL I DET+ L AVILGTAES G  P +D   DPKS +HI  GT+P+E D+L+EME V AV K YDV+V+R +VI +YNQI SRD+G VI
Sbjct:    1 MLKLHIKDETSRLRAVILGTAESCGPTPSLDEAYDPKSAQHIAAGTYPLEKDMLQEMEAVAAVLKKYDVEVFRPKVIKDYNQIFSRDIGFVI 92          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10132.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A848V032_9FLAO2.640e-3165.59Amidinotransferase n=1 Tax=Flavobacteriales bacter... [more]
A0A3D5S2N2_9BACT1.460e-3059.78Amidinotransferase n=3 Tax=Bacteria TaxID=2 RepID=... [more]
A0A238XZ59_9FLAO2.240e-2959.78N-Dimethylarginine dimethylaminohydrolase n=1 Tax=... [more]
A0A1W2GAW8_9BACT3.210e-2959.14N-Dimethylarginine dimethylaminohydrolase n=1 Tax=... [more]
A0A1B8TWS9_9FLAO6.220e-2959.78Amidinotransferase n=1 Tax=Polaribacter reichenbac... [more]
A0A6L6UAV5_9FLAO8.580e-2962.64Amidinotransferase n=1 Tax=Winogradskyella endarac... [more]
A0A7Y3HU65_9FLAO8.750e-2961.96Amidinotransferase n=1 Tax=Croceitalea sp. TaxID=1... [more]
UPI001F35E1AB1.230e-2860.87arginine deiminase family protein n=1 Tax=Gillisia... [more]
A0A239CBX7_9FLAO1.730e-2858.70N-Dimethylarginine dimethylaminohydrolase n=1 Tax=... [more]
A0A2E4HHS0_9BACT2.430e-2860.87Amidinotransferase n=1 Tax=Cytophagaceae bacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10132contigC-australica_Contig_10132:3..281 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog985255.APHJ01000040_gene301
PFAMsAmidinotransf
Model size279
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.98e-29
EggNOG OGsCOG1834@1|root,COG1834@2|Bacteria,4NEUJ@976|Bacteroidetes,1HWNG@117743|Flavobacteriia,2P68J@244698|Gillisia
DescriptionAmidinotransferase
Cds size279
COG categoryE
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586748.3477983-CDS-C-australica_Contig_10132:2..2811682586748.3477983-CDS-C-australica_Contig_10132:2..281Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10132 3..281 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10132.1.1prot_C-australica_Contig_10132.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10132 3..281 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10132.1.1

>prot_C-australica_Contig_10132.1.1 ID=prot_C-australica_Contig_10132.1.1|Name=mRNA_C-australica_Contig_10132.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=93bp
MIKLGIYDETAPLEAVILGTAESFGGVPDMDNTNDPKSVEHILDGTFPVE
SDLLKEMEGVDAVFKNYDVDVYRQEVIPNYNQIISRDVGMVIG
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mRNA from alignment at C-australica_Contig_10132:3..281-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10132.1.1 ID=mRNA_C-australica_Contig_10132.1.1|Name=mRNA_C-australica_Contig_10132.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=279bp|location=Sequence derived from alignment at C-australica_Contig_10132:3..281- (Chrysoparadoxa australica CS_1217)
ATGATAAAACTTGGGATTTACGACGAAACAGCACCATTGGAAGCAGTGAT TCTTGGCACCGCTGAAAGCTTTGGTGGAGTTCCGGATATGGATAATACCA ATGATCCAAAGTCAGTAGAACACATATTAGATGGAACATTCCCCGTAGAA TCTGATTTACTTAAAGAGATGGAAGGTGTGGATGCTGTATTTAAGAATTA TGATGTTGATGTCTATCGACAGGAAGTGATCCCGAACTATAATCAGATTA TTTCACGTGATGTAGGGATGGTCATCGGT
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Coding sequence (CDS) from alignment at C-australica_Contig_10132:3..281-

>mRNA_C-australica_Contig_10132.1.1 ID=mRNA_C-australica_Contig_10132.1.1|Name=mRNA_C-australica_Contig_10132.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=279bp|location=Sequence derived from alignment at C-australica_Contig_10132:3..281- (Chrysoparadoxa australica CS_1217)
ATGATAAAACTTGGGATTTACGACGAAACAGCACCATTGGAAGCAGTGAT
TCTTGGCACCGCTGAAAGCTTTGGTGGAGTTCCGGATATGGATAATACCA
ATGATCCAAAGTCAGTAGAACACATATTAGATGGAACATTCCCCGTAGAA
TCTGATTTACTTAAAGAGATGGAAGGTGTGGATGCTGTATTTAAGAATTA
TGATGTTGATGTCTATCGACAGGAAGTGATCCCGAACTATAATCAGATTA
TTTCACGTGATGTAGGGATGGTCATCGGT
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