mRNA_C-australica_Contig_10131.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Match: UPI001CA6AA1D (sterol desaturase family protein n=1 Tax=Algiphilus sp. NNCM1 TaxID=2834409 RepID=UPI001CA6AA1D) HSP 1 Score: 107 bits (266), Expect = 8.380e-27 Identity = 49/97 (50.52%), Postives = 63/97 (64.95%), Query Frame = 1 Query: 1 PVLTLGAFWLLPQPGLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQKLFQNHRLHHFRNEHYWYSFTVPQVDAMFGTAPDATDVPRTPTCRTL 291 PVL A+WL+P LA + + L YEWTHF+VH+RI+P + + Q LF+ HR+HHFRNE+YWY FT+ VD GT PD PR+P CR L Sbjct: 121 PVLFAAAWWLMPDRALALSALVGYGLAALNYEWTHFMVHTRIQPGNRYYQSLFRAHRMHHFRNENYWYGFTLTSVDRWLGTGPDPDATPRSPHCRDL 217
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Match: A0A3M1ZWA0_9DELT (Fatty acid hydroxylase family protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1ZWA0_9DELT) HSP 1 Score: 105 bits (263), Expect = 2.900e-26 Identity = 49/97 (50.52%), Postives = 67/97 (69.07%), Query Frame = 1 Query: 4 VLTLGAFWLL-PQPGLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQKLFQNHRLHHFRNEHYWYSFTVPQVDAMFGTAPDATDVPRTPTCRTL 291 V+ + A WLL P L T +A +AG+ L YEW H++VHSR +PRS F +L+++HRLHHF+NEHYW+ ++ D + GT PD VP +PTCRTL Sbjct: 118 VVEIAAVWLLLPTWPLRLTALATMAGLGLWYEWIHYLVHSRYRPRSRFIARLYRHHRLHHFKNEHYWFGVSMTSGDRLLGTMPDHRTVPTSPTCRTL 214
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Match: A0A2D5ENV0_9DELT (Fatty acid hydroxylase n=2 Tax=Myxococcales TaxID=29 RepID=A0A2D5ENV0_9DELT) HSP 1 Score: 106 bits (264), Expect = 3.000e-26 Identity = 50/94 (53.19%), Postives = 64/94 (68.09%), Query Frame = 1 Query: 19 AFWLL---PQPGLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQKLFQNHRLHHFRNEHYWYSFTVPQVDAMFGTAPDATDVPRTPTCRTL 291 AFW++ P AAT +AA + M LLYEWTHF+VH+ +KP+S F +++ +NHR HH+RNE YWYSF P VD GT PD VPR+PT L Sbjct: 149 AFWVVVTGASPRKAATGIAAYSTMALLYEWTHFLVHTGVKPKSRFFKRVRRNHRFHHYRNEDYWYSFVYPDVDRWLGTEPDPKSVPRSPTAMKL 242
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Match: A0A356T4U9_9DELT (Fatty acid hydroxylase n=2 Tax=Myxococcales TaxID=29 RepID=A0A356T4U9_9DELT) HSP 1 Score: 103 bits (256), Expect = 2.760e-25 Identity = 46/93 (49.46%), Postives = 64/93 (68.82%), Query Frame = 1 Query: 19 AFWLLPQP--GLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQKLFQNHRLHHFRNEHYWYSFTVPQVDAMFGTAPDATDVPRTPTCRTL 291 AFW L P G+ T +AA TL+YEWTH++ H+ +PR + + + +NHR+HHFRNE YW+SFT P +D FGT P+ ++VPR+ TC TL Sbjct: 128 AFWWLVSPTTGVMLTGIAAFTAATLVYEWTHYLTHTPYRPRGRYYRWIRRNHRMHHFRNEAYWHSFTAPFLDTAFGTGPEPSEVPRSETCHTL 220
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Match: UPI00069415D2 (sterol desaturase family protein n=1 Tax=Algiphilus aromaticivorans TaxID=382454 RepID=UPI00069415D2) HSP 1 Score: 102 bits (254), Expect = 6.020e-25 Identity = 47/97 (48.45%), Postives = 61/97 (62.89%), Query Frame = 1 Query: 1 PVLTLGAFWLLPQPGLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQKLFQNHRLHHFRNEHYWYSFTVPQVDAMFGTAPDATDVPRTPTCRTL 291 P+L +W P P LA + + L YEWTHF+VH+RI+P++ + Q LF+ HR+HHFRNE YWY FT+ VD M GT PD PR+ CR L Sbjct: 127 PLLLALGWWAAPDPALAMSALVGYGFAALNYEWTHFMVHTRIQPQNRYYQGLFRAHRMHHFRNEKYWYGFTLTSVDRMLGTGPDPDVTPRSEHCRDL 223
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Match: A0A2E6VPB9_9DELT (Fatty acid hydroxylase domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E6VPB9_9DELT) HSP 1 Score: 102 bits (253), Expect = 2.990e-24 Identity = 46/96 (47.92%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 7 LTLGAFWLL-PQPGLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQKLFQNHRLHHFRNEHYWYSFTVPQVDAMFGTAPDATDVPRTPTCRTL 291 L A+W L P A T M TL+YEW H++ H+ KPR+ F + +++NHRLHHF+NEHYW+SFT+P +D + GT P DV T TC TL Sbjct: 168 LHFSAWWFLSPDKYFAFTGMTVFTAATLIYEWVHYLTHTNHKPRTRFYKTIWRNHRLHHFKNEHYWHSFTMPVIDVIMGTCPSPKDVDATKTCMTL 263
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Match: A0A1Q5HXS3_9ACTN (Fatty acid hydroxylase n=2 Tax=Streptomyces sp. CB02009 TaxID=1703938 RepID=A0A1Q5HXS3_9ACTN) HSP 1 Score: 97.4 bits (241), Expect = 4.230e-23 Identity = 44/92 (47.83%), Postives = 62/92 (67.39%), Query Frame = 1 Query: 19 AFWLLPQPGLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQKLFQNHRLHHFRNEHYWYSFTVPQV-DAMFGTAPDATDVPRTPTCRTL 291 AF P G A T+MA +A + L+YEWTH+++HS KPRSA + +++NHR HH++NEHYW++ T D +FGT PD VP +PT + L Sbjct: 122 AFLAFPTLGQALTFMATVAAVGLVYEWTHYLIHSEYKPRSASYKAVWRNHRFHHYKNEHYWFTVTTTATADRLFGTYPDPASVPTSPTAKNL 213
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Match: A0A839RQT5_9MYCO (Fatty acid hydroxylase domain-containing protein n=2 Tax=Hoyosella TaxID=697025 RepID=A0A839RQT5_9MYCO) HSP 1 Score: 97.4 bits (241), Expect = 4.520e-23 Identity = 44/98 (44.90%), Postives = 64/98 (65.31%), Query Frame = 1 Query: 1 PVLTLGAFWLLPQPGLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQKLFQNHRLHHFRNEHYWYSFTVP-QVDAMFGTAPDATDVPRTPTCRTL 291 P L AF LP+PGLA T++ ++ + L YEWTHF++HS +P+S F + +++NHR HHF+NEHYW++ T D + GT PD V +PT + L Sbjct: 118 PTLVAAAFLALPRPGLALTFILTMSAIGLAYEWTHFLIHSNYRPQSRFYRAIWRNHRNHHFKNEHYWFTVTTSGTADRVLGTYPDPKAVETSPTAKNL 215
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Match: UPI0003B5EB8C (sterol desaturase family protein n=1 Tax=Perlucidibaca piscinae TaxID=392589 RepID=UPI0003B5EB8C) HSP 1 Score: 97.4 bits (241), Expect = 5.370e-23 Identity = 49/97 (50.52%), Postives = 65/97 (67.01%), Query Frame = 1 Query: 1 PVLTLGAFWLLPQPGLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQKLFQNHRLHHFRNEHYWYSFTVPQVDAMFGTAPDATDVPRTPTCRTL 291 P+L L A LLP +A +++ L YEWTH+IVH+RI+PRSA+ Q +F+NHRLHHFR+E YW+SF +P +D GT PDA V + T R L Sbjct: 123 PMLVL-AVPLLPDRAVALSFLTGFGLAALNYEWTHWIVHTRIQPRSAYYQAVFRNHRLHHFRHEDYWFSFMLPALDRWLGTGPDAASVAPSGTARDL 218
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Match: A0A1I1X6V7_9DELT (Fatty acid hydroxylase superfamily protein n=3 Tax=Nannocystis TaxID=53 RepID=A0A1I1X6V7_9DELT) HSP 1 Score: 96.7 bits (239), Expect = 1.160e-22 Identity = 43/90 (47.78%), Postives = 57/90 (63.33%), Query Frame = 1 Query: 22 FWLLPQPGLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQKLFQNHRLHHFRNEHYWYSFTVPQVDAMFGTAPDATDVPRTPTCRTL 291 F L P P +A + + M LYEWTH++ H+ KPR F +++++ HRLHHF+NEHYW T D + GT PD T VP +PTCRTL Sbjct: 131 FLLAPTPQVALSGVVGSVTMAFLYEWTHYLTHTGYKPRGEFYRRIWRYHRLHHFKNEHYWQGVTTHLGDRILGTMPDHTGVPNSPTCRTL 220 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10131.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10131.1.1 >prot_C-australica_Contig_10131.1.1 ID=prot_C-australica_Contig_10131.1.1|Name=mRNA_C-australica_Contig_10131.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=97bp PVLTLGAFWLLPQPGLAATWMAALAGMTLLYEWTHFIVHSRIKPRSAFAQback to top mRNA from alignment at C-australica_Contig_10131:541..831- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10131.1.1 ID=mRNA_C-australica_Contig_10131.1.1|Name=mRNA_C-australica_Contig_10131.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=291bp|location=Sequence derived from alignment at C-australica_Contig_10131:541..831- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10131:541..831- >mRNA_C-australica_Contig_10131.1.1 ID=mRNA_C-australica_Contig_10131.1.1|Name=mRNA_C-australica_Contig_10131.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=291bp|location=Sequence derived from alignment at C-australica_Contig_10131:541..831- (Chrysoparadoxa australica CS_1217)back to top |