Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 1387 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Cds size | 696 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586747.6289108-UTR-C-australica_Contig_1013:2775..2906 | 1682586747.6289108-UTR-C-australica_Contig_1013:2775..2906 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1013 2776..2906 + |
| 1682586747.7401783-UTR-C-australica_Contig_1013:4442..5002 | 1682586747.7401783-UTR-C-australica_Contig_1013:4442..5002 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1013 4443..5002 + |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586747.6407473-CDS-C-australica_Contig_1013:2906..2929 | 1682586747.6407473-CDS-C-australica_Contig_1013:2906..2929 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1013 2907..2929 + |
| 1682586747.6550038-CDS-C-australica_Contig_1013:3016..3072 | 1682586747.6550038-CDS-C-australica_Contig_1013:3016..3072 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1013 3017..3072 + |
| 1682586747.6681976-CDS-C-australica_Contig_1013:3181..3260 | 1682586747.6681976-CDS-C-australica_Contig_1013:3181..3260 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1013 3182..3260 + |
| 1682586747.6848133-CDS-C-australica_Contig_1013:3331..3469 | 1682586747.6848133-CDS-C-australica_Contig_1013:3331..3469 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1013 3332..3469 + |
| 1682586747.6966326-CDS-C-australica_Contig_1013:3590..3723 | 1682586747.6966326-CDS-C-australica_Contig_1013:3590..3723 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1013 3591..3723 + |
| 1682586747.708557-CDS-C-australica_Contig_1013:3810..3875 | 1682586747.708557-CDS-C-australica_Contig_1013:3810..3875 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1013 3811..3875 + |
| 1682586747.7190764-CDS-C-australica_Contig_1013:4029..4132 | 1682586747.7190764-CDS-C-australica_Contig_1013:4029..4132 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1013 4030..4132 + |
| 1682586747.7323918-CDS-C-australica_Contig_1013:4343..4442 | 1682586747.7323918-CDS-C-australica_Contig_1013:4343..4442 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1013 4344..4442 + |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1013.2.2 >prot_C-australica_Contig_1013.2.2 ID=prot_C-australica_Contig_1013.2.2|Name=mRNA_C-australica_Contig_1013.2.2|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=232bp
MEVFDRASINRENTRCPEDSYGTSPQDVPTKKEYTPVAWRAGELYHVKLD
ERSSHRTVSNATIGTAALSLSQSNSFSSAASEEDLSEEEFSDGALATDGA
RSYWAPLQVKPSPKLGGDDPLPKFFSLSSSEDDEESRKEKMLQSDKELMA
PACKVRRPVVQLQPSGLKNDKQRHPVSSMVVSDNLSQSLGRQIGGFAAKL
VSCWWCTHGMEGRLYEDDHGHARLSLQQQLQ* back to topmRNA from alignment at C-australica_Contig_1013:2776..5002+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1013.2.2 ID=mRNA_C-australica_Contig_1013.2.2|Name=mRNA_C-australica_Contig_1013.2.2|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2227bp|location=Sequence derived from alignment at C-australica_Contig_1013:2776..5002+ (Chrysoparadoxa australica CS_1217)
CTCCATTGTTTCTTATAACGAAAGCACACTTTTAGAGAAACCATAAAGTA
GAGACACACACGCCGCATAAGATACACTTGGCGCAGCACAATCACACAAT
CACGTTGGAAGGCTGGGCTGCCTAGTTCAATATGGAGGTTTTCGATAGAG
CGAGGTGACCAGACCCTCCTCCTACTTCCCCTCCTGTCCTCCCTTGGGTT
GGGCGATTTCCACGGCTAAGCAAACCTCCCAACCTAAGCAGCATCAATAG
GGAGAACACTAGATGTCCAGAAGATAGCTACGGCACAAGCCCTCAAGGTA
AGAGCGTGCCCTCCCTCCTGTAGGGTACCTAGACATCTGGGGCAACACCA
TTGCGCACTCGCTGCTCATTTTGTATTTCATGGACTCCTGTTTTCTCCCA
TGACAGATGTCCCAACGAAGAAAGAGTACACTCCTGTGGCCTGGAGAGCT
GGAGAGCTGTACCACGTGAAGCTGGACGAAAGAAGGTGATCCCTCCTCTC
TCTCTCTCTCTCTCTCTCTCTAACAGGTGACAGCTGACAGGTCGCTTCCC
TCACAGTTCACACAGGACTGTAAGTAATGCCACTATAGGCACCGCTGCAC
TGAGCCTGAGCCAGTCCAACTCATTCTCAAGCGCTGCGTCTGAGGAGGAC
TTGTCTGAGGAGGAGTTTTCAGATGGGGCGCTTGCTACCGATGGGTAAGG
CTTCACCTTGCATGGTCTCTATCCTAACTCTAACCCTAACTCTAACCCTT
GCCCCTCATACGAGCTGAACTCTCCAGGACTGCCCTTACCACCATAACCT
TTTGCTCCAACTCAGGGCCAGGTCCTATTGGGCACCGCTGCAGGTGAAGC
CCTCCCCAAAGCTAGGCGGGGATGATCCCCTGCCGAAGTTTTTTTCGTTG
AGCTCCAGTGAGGATGACGAAGAAAGCAGAAAGGAGAAGATGTTGCAGGT
GGGGCCATCTTGCTTGGCACCTTGCTGCAGTTTCCTTTGGTCCTTTGGTC
TGCTGATGCACTCACCTAAGCACCTCTAAACTCAGTCCGATAAAGAGCTC
ATGGCACCAGCATGCAAGGTTCGGCGGCCCGTGGTACAGCTGCAGCCAAG
GTGCTCCCTCCCACACATCTATTTGCAAATGTCTATTTCCTCCACATTAG
CAGTCGCTTTCAAGTTCACCGTATATTTAGAAAGCTCACTAGCTGGCCAG
CTATACCAACGAACCAAAACTGATAAAACTGGACCCCTTGCTCTTATTGT
CAAGTGGGCTTAAGAATGACAAGCAACGGCATCCTGTTTCTTCCATGGTG
GTGAGCGACAACTTGAGCCAATCTCTTGGGCGCCAGATAGGAGGCTTTGC
TGCAAAGGTACAAGCGCTCTTGGTTTCACGCCTTCCTTAGTCTTTAGCCC
TAGCTTCAGCAGCCTCTTGGTGCACTCCCGAAGCAGTGGTTTAGCGGCTG
CCAGCACCCAATGATGCGCGAAATCTCTCTCTTCACAAGCGAGTTATTAA
ATTTAGTTCTCTTTTTCTCACCTGCAAGTAGAGCATGAGCAATTTACCTG
AGCATCCGTCCTGTGCAGTTAGTCTCATGCTGGTGGTGCACTCATGGCAT
GGAGGGGAGGCTGTACGAAGATGACCACGGGCATGCCCGTTTGTCCCTCC
AGCAACAGTTACAGTGAGGGCAAGCATGTCTGGGTGACTTGAGAGGCATG
ATCGTGAGTGACTTGCCTCCTTATTGCTTACTGCTTACTGCTTGTACTAA
GTCTTTTGGTGCTTACAGCTCACAGCCCTTTACCCTCCTTACCTCACGCA
ATGAGTGCTCTTACTCACACGCAATGAGTGCTCTTACATATATAAGTATC
CATATAAGCCAGGCGCCGGTTGTGACCAGATTCTCCGCCCTTTGAAACAG
GCTGCTAGAGTTTGATGTAGGTATGGAAGGATGGGGGAAGCCTCGGTATT
TATATTCCTAGGTGTGAGGAAGGTCTTGCTGGGCCTTTTAATAGAGCACC
GTAGATTCTTTGGGGCATAGACAAGAGAACAGATACAAGAACAGAGCTTT
AGGAAAAGATGTAGAGGGGTTGGCATAGATTAGGGGGAGCAGCATTTCTT
TGAAGGTTTTCTGGGTGCTAAAGGCTAGGGGAGATGCAGCGATCGACTTC
ATAACTTTTGGAGATGCAGTGACCGACTTTCATAATTTTTGTTTGGGAAC
CTCCATGCTCTGAGCGCGAGGTTCCAC back to topCoding sequence (CDS) from alignment at C-australica_Contig_1013:2776..5002+ >mRNA_C-australica_Contig_1013.2.2 ID=mRNA_C-australica_Contig_1013.2.2|Name=mRNA_C-australica_Contig_1013.2.2|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=696bp|location=Sequence derived from alignment at C-australica_Contig_1013:2776..5002+ (Chrysoparadoxa australica CS_1217)
ATGGAGGTTTTCGATAGAGCGAGCATCAATAGGGAGAACACTAGATGTCC
AGAAGATAGCTACGGCACAAGCCCTCAAGATGTCCCAACGAAGAAAGAGT
ACACTCCTGTGGCCTGGAGAGCTGGAGAGCTGTACCACGTGAAGCTGGAC
GAAAGAAGTTCACACAGGACTGTAAGTAATGCCACTATAGGCACCGCTGC
ACTGAGCCTGAGCCAGTCCAACTCATTCTCAAGCGCTGCGTCTGAGGAGG
ACTTGTCTGAGGAGGAGTTTTCAGATGGGGCGCTTGCTACCGATGGGGCC
AGGTCCTATTGGGCACCGCTGCAGGTGAAGCCCTCCCCAAAGCTAGGCGG
GGATGATCCCCTGCCGAAGTTTTTTTCGTTGAGCTCCAGTGAGGATGACG
AAGAAAGCAGAAAGGAGAAGATGTTGCAGTCCGATAAAGAGCTCATGGCA
CCAGCATGCAAGGTTCGGCGGCCCGTGGTACAGCTGCAGCCAAGTGGGCT
TAAGAATGACAAGCAACGGCATCCTGTTTCTTCCATGGTGGTGAGCGACA
ACTTGAGCCAATCTCTTGGGCGCCAGATAGGAGGCTTTGCTGCAAAGTTA
GTCTCATGCTGGTGGTGCACTCATGGCATGGAGGGGAGGCTGTACGAAGA
TGACCACGGGCATGCCCGTTTGTCCCTCCAGCAACAGTTACAGTGA back to top
|