mRNA_C-australica_Contig_1011.6.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1011.6.1
Unique NamemRNA_C-australica_Contig_1011.6.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Match: A0A836C7R7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7R7_9STRA)

HSP 1 Score: 338 bits (866), Expect = 1.100e-107
Identity = 167/323 (51.70%), Postives = 219/323 (67.80%), Query Frame = 3
Query:    3 DGHSTAFNYTWLRVNCPRGIHPTGQRMISPVVAKSIKPTKVV-VDGDHTVNVTWSDGHESGFDAEWLRIHDNSVANQIEK--------------NHASWPNSLKAWEAIPVVSFKDYMECEKSVHSLLRHINTSGLCIVEGCGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQDLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDVLKSVPATFQKIRDSVTPEEGDGNDSS---------ATPNAAAASPAHLTYQRPHIEVTADGEIVAVNWAPMFEGMLSIPIQD 899
            DGH++ +N TWLRVNCP  +H +GQR+ SP     + P  V   +G   + VTWSDGHES + ++WLR+HD+SV++ I++              N  SWP +L++WEAIP V+F D+   E+ V+ LLR +N +GLC +EG G E DTV+ +AQRI+PLSHS LYG +FDVI Q+ ARNIA+T E L  HQDLVYYES PGLQLLHCL +D  ++GG +++LDA  AA +FR+ H + F VL + PATFQKIR  V  EEG+G +           +T NAAA S +++TYQRPHIEV  DGEI  V WAPMFEG L +P +D
Sbjct:   41 DGHASIYNTTWLRVNCPANVHASGQRLASPGDVLDVTPVTVAPAEGKEGMRVTWSDGHESVYPSQWLRLHDSSVSSIIDRQVRQWRAGGARVSENQGSWPVALRSWEAIPKVAFADFTAGEEGVYQLLRSVNNTGLCTLEGVGTEPDTVESIAQRISPLSHSMLYGRTFDVISQDNARNIAFTSEHLRPHQDLVYYESPPGLQLLHCLHYDASVEGGASLFLDAFEAARLFRKAHAEAFSVLTTTPATFQKIRKLVVQEEGEGGEGDKGEVEKGGYSTANAAALSASYMTYQRPHIEVDTDGEITGVFWAPMFEGTLHVPSKD 363          
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Match: A0A6H5KBM7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBM7_9PHAE)

HSP 1 Score: 300 bits (768), Expect = 1.210e-92
Identity = 152/300 (50.67%), Postives = 200/300 (66.67%), Query Frame = 3
Query:    3 DGHSTAFNYTWLRVNCPRGIHPTGQRMISPV-VAKSIKPTKVVVDGDHTVNVTWSDGHESGFDAEWLRIHDNSVANQIEKNHASWPNSLKAWEAIPVVSFKDYMECEKSVHSLLRHINTSGLCIVEGCGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQDLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDVLKSVPATFQKIRDSVTPEEGDGNDSSATPNAAAASPAHLTYQRPHIEVTADGEIVAVNWAPMFEGMLSIPIQD 899
            DGH++ F+YTWLRVNCP  +H +GQR + P  V   +KP +    GD  V++TWSDGH S +   WLR HDNS +   E++H S P  L+AW+AIP V  +DYME   +V+  LR IN  G+ ++E  G E  TV  +A+R+AP+SH  LYG+ FDVI Q+  RN+AYT+E L  H DLVYYES PGLQ LHCL FDE  KGG+T +LDA AAA+  R K P++F+VL  VP TF+KIR +    +G+G       N  A  P+H+ YQRP  ++ A+GE++AV WAPMFEG+L    QD
Sbjct:   96 DGHNSYFDYTWLRVNCPSFLHESGQRTLFPGDVDPGLKPVETSA-GDSRVSITWSDGHLSCYGTAWLREHDNSPSALHERSHGSRPAPLRAWDAIPKVDARDYMEDGGAVYRTLRKINRVGVVLLENAGAEEGTVLDLARRVAPVSHHTLYGEMFDVISQDNPRNLAYTNERLRMHMDLVYYESPPGLQFLHCLEFDEGAKGGQTNFLDAFAAADHLREKFPEKFEVLSRVPTTFEKIRAAAPRVDGEGR------NVQALEPSHMQYQRPIFQLDANGELLAVTWAPMFEGVLMCQPQD 388          
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Match: D7FYZ1_ECTSI (TauD domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYZ1_ECTSI)

HSP 1 Score: 223 bits (568), Expect = 2.660e-66
Identity = 112/218 (51.38%), Postives = 148/218 (67.89%), Query Frame = 3
Query:   96 VAKSIKPTKVVVD-GDHTVNVTWSDGHESGFDAEWLRIHDNSVANQIEKNHASWPNSLKAWEAIPVVSFKDYMECEKSVHSLLRHINTSGLCIVEGCGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQDLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDVLKSVPATFQKIRDSVTPEEGDG 746
            VA  ++P       GD  V++TWSDGH S +   WLR HDNS +   E++H S P  L AW+AIP V  ++YME + +++  LR +N  G+ ++E  GVE  TV  +A+R+AP+SH  LYGD FDV+ Q   RN+AYT+E L  H DLVYYESAPGLQLLHCL FDE  KGG+T +LDA AAA+ FR K P++F+VL  VP TF+KIR +    +G+G
Sbjct:   25 VAGQLEPMHTCTSAGDSRVSITWSDGHLSSYGTAWLREHDNSPSALHERSHGSRPAPLCAWDAIPKVDAREYMEDDGALYKTLRKVNRVGVVLLENAGVEEGTVLDLARRVAPVSHHTLYGDMFDVVSQANPRNMAYTNERLRMHMDLVYYESAPGLQLLHCLEFDEGGKGGQTSFLDAFAAADHFREKFPEKFEVLSRVPTTFEKIRAAAPRVDGEG 242          
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Match: A0A8K1FLN9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FLN9_PYTOL)

HSP 1 Score: 202 bits (514), Expect = 1.180e-55
Identity = 112/303 (36.96%), Postives = 172/303 (56.77%), Query Frame = 3
Query:    3 DGHSTAFNYTWLRV--NCPRGIHPTGQRMISPV-VAKSIKPTKVVVDGDHTVNVTWS-DGHESGFDAEWLRIHDNSVANQIEKNHASWPNSLKAWEAIPVVSFKDYMECEKSVHSLLRHINTSGLCIVEGCGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQDLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDVLKSVPATFQKIRDSVTPEEGDGNDSSATPNAAAASPAHLTYQRPHIEVTADGEIVAVNWAPMFEGMLSIPIQD 899
            DGH++ F+   LR    CP   H TGQR+++   + ++++   + V G+ T+ V W  DGH+S F  +WLR +  S ++   +       +L   + +P V + + M  ++ +  +L  +  +GL +V+        V+ VAQR+A +SHS+LYGD FDVI ++   NIAYT+  L +H DL YYES PG QLLH LRFDE ++GG++ ++D  AA +  RR HP+ F     VPATF+K                   +   ++PA + YQRPHI +    E+VAV+W+P FEG L +P +D
Sbjct:   92 DGHASQFHLLHLRTWCPCPECQHETGQRLVNSADIPENLEINDMFVKGE-TLTVVWGPDGHKSTFTWDWLRENCYSASSLDRRARDMTTKALAPGDEVPCVEYVEMMNSDEGLLKMLHQVVENGLTVVKNTPSNPGQVKTVAQRVATISHSFLYGDIFDVIAEQNPVNIAYTNHHLKHHLDLAYYESPPGFQLLHALRFDETVQGGESTFVDVFAATDELRRLHPQHFQTFCRVPATFRKH------------------HLNRSNPAVMEYQRPHILLNHREEVVAVHWSPPFEGPLRVPFED 375          
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Match: K3WUI5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WUI5_GLOUD)

HSP 1 Score: 197 bits (501), Expect = 1.030e-53
Identity = 114/305 (37.38%), Postives = 166/305 (54.43%), Query Frame = 3
Query:    3 DGHSTAFNYTWLR--VNCPRGIHPTGQRMI-SPVVAKSIKPTKVVVDGDHTVNVTWS-DGHESGFDAEWLRIHDNSVANQIEKNHASWPNSLKAWEAIPVVSFKDYMECE--KSVHSLLRHINTSGLCIVEGCGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQDLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDVLKSVPATFQKIRDSVTPEEGDGNDSSATPNAAAASPAHLTYQRPHIEVTADGEIVAVNWAPMFEGMLSIPIQD 899
            DG  + F+   LR    CP   H TGQR++ S  +   ++   + + G  TVN+ W+  GH+S F   WLR +  S A   +         L     +P+  + + M+ E  + +  LL  I  +GL +V+    E   V+ +A+RIAP+SHS+LYGD FDV+ ++   NIAYT   L +H DL YYES PG Q LH LRFDE ++GG++ ++D  A A  FRR HPK F+    VPATF+K                   +   ++PA + YQRPHI++    E++AV+W+P FEG L +P  D
Sbjct:   96 DGRISRFHLMHLRSWCLCPECQHETGQRLVNSSDIDPDLEIEDIFIKGS-TVNIVWAGSGHKSSFPWSWLRENCYSGATLDQNAKDLTTTMLLPSAPVPMSEYAEVMDTEDDQGLFGLLHQIVENGLAVVQNTPSEKGQVKKIAERIAPVSHSFLYGDIFDVVAEQNPVNIAYTTHHLKHHLDLAYYESPPGFQFLHALRFDETVQGGESTFVDVFAVAQEFRRLHPKHFETFCRVPATFKKH------------------HLNRSNPAIMEYQRPHIQLNHRDEVIAVHWSPPFEGPLKVPFDD 381          
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Match: W2R732_PHYPN (Uncharacterized protein n=16 Tax=Phytophthora TaxID=4783 RepID=W2R732_PHYPN)

HSP 1 Score: 194 bits (494), Expect = 7.590e-53
Identity = 119/304 (39.14%), Postives = 166/304 (54.61%), Query Frame = 3
Query:    3 DGHSTAFNYTWLRVNCPRGI--HPTGQRMI--SPVVAKSIKPTKVVVDGDHTVNVTWSDGHESGFDAEWLRIHDNS--VANQIEKNHASWPNSLKAWEAIPVVSFKDYMEC--EKSVHSLLRHINTSGLCIVEGCGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQDLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDVLKSVPATFQKIRDSVTPEEGDGNDSSATPNAAAASPAHLTYQRPHIEVTADGEIVAVNWAPMFEGMLSIP 890
            DG  + F+   LR  CP     HPTGQR+I  S V    +   KV V GD T+N+ W+D HES F  +WL  +  S    +Q   + A+ P +L+A   +P   ++  M+   +K ++  LR +   G  ++         V+ +A+RIAP+SHS+ YGD FDV+ +    NIAYT   L  H DL YYES PGLQ LH LRFDE +KGG++ ++D  A A  FRR HP+ F     VPATF+K    +T E+                   + YQRPHI++    E+VAV+W+P FEG L +P
Sbjct:   81 DGKRSKFHLLHLRTWCPCSECGHPTGQRVINCSEVNQDELDIEKVFVKGD-TLNIVWNDHHESSFSCKWLLENSYSDWALDQFAHDMATTPLALEA--PVPSTEYERMMDTSDDKGLYEALRQVVDHGFTVIRNTPSVEGAVKTLAERIAPISHSFQYGDVFDVVAEPTPVNIAYTTVYLKSHVDLAYYESPPGLQFLHALRFDESVKGGESTFVDVFAVAEEFRRLHPEHFATFCRVPATFKKHH--LTREKAT----------------IMEYQRPHIQLNHRDEVVAVHWSPPFEGPLRVP 363          
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Match: A0A5D6XU33_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XU33_9STRA)

HSP 1 Score: 191 bits (485), Expect = 7.010e-52
Identity = 110/288 (38.19%), Postives = 160/288 (55.56%), Query Frame = 3
Query:   48 CPRGIHPTGQRMI-SPVVAKSIKPTKVVVDGDHTVNVTWS-DGHESGFDAEWLRIHDNSVANQIEKNHASWPNSLKAWEAIPVVSFKDYMEC--EKSVHSLLRHINTSGLCIVEGCGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQDLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDVLKSVPATFQKIRDSVTPEEGDGNDSSATPNAAAASPAHLTYQRPHIEVTADGEIVAVNWAPMFEGMLSIPIQD 899
            CP   H TGQR++ S  +  + +   + V G  T+N+ W+ DGH+S F   WLR +  S A   ++       +L     IP   +   M+   ++ +  LL  +  +GL +V     E   V+ +A+RIAP+SHS+LYGD FDVI ++   NIAYT   L +H DL YYES PGLQ LH LRFDE ++GG++ ++D  AAA   RR HP  F+ L  VPATF+K                   +   ++PA + +QRPHI++    E++AV+W+P FEG L +P  D
Sbjct:   64 CPTCQHETGQRLVNSSDIPLNPEIEDIFVKGS-TLNIVWAGDGHKSTFAWSWLRDNCYSTAALDQRASGLTTTALAPRAPIPTSDYSRVMDATDDEGLLELLHQVVENGLAVVANTPSEPGQVKKIAERIAPVSHSFLYGDIFDVIAEQNPVNIAYTTHHLKHHLDLAYYESPPGLQFLHALRFDESVQGGESTFVDVFAAAAELRRLHPTHFETLCRVPATFKKH------------------HLHRSNPAVMEFQRPHIQLNHRNEVIAVHWSPPFEGPLKVPFDD 332          
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Match: A0A2D4CIR6_PYTIN (Uncharacterized protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CIR6_PYTIN)

HSP 1 Score: 195 bits (495), Expect = 7.540e-51
Identity = 113/305 (37.05%), Postives = 174/305 (57.05%), Query Frame = 3
Query:    3 DGHSTAFNYTWLR--VNCPRGIHPTGQRMISPV-VAKSIKPTKVVVDGDHTVNVTWS-DGHESGFDAEWLRIHDNSVA--NQIEKNHASWPNSLKAWEAIPVVSFKDYMECEKSVHSLLRHINTSGLCIVEGCGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQDLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDVLKSVPATFQKIRDSVTPEEGDGNDSSATPNAAAASPAHLTYQRPHIEVTADGEIVAVNWAPMFEGMLSIPIQD 899
            DG ++ ++   LR    CP   H TGQR+++   VA+ ++   + V G+ T+ + W  DGH+S F   WLR +  S A  ++  ++ A+ P  L     IP +++   ME ++ +  +L  +   G  +++    E   V+ VA+R+AP+SHS+LYGD FDVI ++   NIAYT+  L +H DL YYES PG QLLH LRFDE ++GG++ ++D  A A  FR++HP  F     VPATF+K                   +   ++PA + YQRPHI++    E++AV+W+P FEG L +P  D
Sbjct:  392 DGRNSKYHLLHLRSWCLCPACQHETGQRLVNSADVAEDLEIRDMFVKGE-TLTIVWGPDGHQSTFPWAWLRENCYSTAALDRRARDMATIP--LLPGAPIPEIAYDRMMENDEGLLEMLHQVVEHGFTVIKNTPSEPRQVKKVAERVAPVSHSFLYGDVFDVIAEQNPVNIAYTNHHLKHHLDLAYYESPPGFQLLHALRFDETVQGGESTFVDVFAVAEAFRQQHPDHFLTFCRVPATFKKH------------------HLNRSNPAVMEYQRPHIQLNHREEVIAVHWSPPFEGPLRVPFDD 675          
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Match: A0A485LE95_9STRA (Aste57867_18585 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LE95_9STRA)

HSP 1 Score: 186 bits (471), Expect = 6.450e-50
Identity = 118/308 (38.31%), Postives = 164/308 (53.25%), Query Frame = 3
Query:    3 DGHSTAFNYTWLRV--NCPRGIHPTGQRMISPVVAKSI-KPTKVVVDGDHTVNVTWSDG----HESGFDAEWLR--IHDNSVANQIEKNHASWPNSLKAWEAIPVVSFKDYMECEKSVHSLLRHINTSGLCIVEGCGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQDLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDVLKSVPATFQKIRDSVTPEEGDGNDSSATPNAAAASPAHLTYQRPHIEVTADGEIVAVNWAPMFEGMLSIPIQD 899
            DGHS++F+   LR    CP+  H TGQR+++   A +  +   V V  D  V + W+ G    H S F A  +R   +D +  + I    A+ P +L A  A+  V + D +  +  V +L +HI   GL IV         VQ VA+ IAP+SH++LYG+ FDV+ +    NIAYT E L  H DL YYES PGLQLLH LR+D  ++GG + + D   AA   R +HP+ F  L  VPATF+K                   +   A+PA L Y+RPHI +    E+V V W+P FEG L +P +D
Sbjct:   44 DGHSSSFDLFHLRAWCTCPQCQHSTGQRLVNIADAPAAPRVDSVQVASDGGVQIQWAGGDATPHASHFQASEIRKMCYDAASLDVI----AATPPALPATTAVSSVQYDD-LSSDAGVLALCQHIMRDGLAIVRHVPSTRGQVQVVAETIAPISHTHLYGNVFDVVAEHNPVNIAYTSERLKLHLDLAYYESPPGLQLLHALRYDPTVQGGDSTFRDTFDAAETLRVRHPEHFRTLTRVPATFKKF------------------HLDRATPAILEYERPHIALNHRDEVVGVFWSPPFEGPLRVPAED 328          
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Match: A0A484DY64_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DY64_BRELC)

HSP 1 Score: 186 bits (472), Expect = 1.170e-49
Identity = 115/309 (37.22%), Postives = 168/309 (54.37%), Query Frame = 3
Query:    3 DGHSTAFNYTWLRV--NCPRGIHPTGQRMI--SPVVAKSIKPTKVVVDGDHTVNVTWSDGHESGFDAEWLRIHDNSVANQIEKNHA----SWPNSLKAWEAIPVVSFKDYMEC--EKSVHSLLRHINTSGLCIVEGCGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQDLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDVLKSVPATFQKIRDSVTPEEGDGNDSSATPNAAAASPAHLTYQRPHIEVTADGEIVAVNWAPMFEGMLSIPIQD 899
            DG  + ++   LR    CP+  HPTGQR+   S V    +   KV V GD T+N+ W+D HES F   WL    NS +     NHA    + P +L A   +P   + ++M+   ++ ++  LR +  +GL ++    + +  V+ +A+RIAP+SHS  YGD FDV+ +    NIAYT   L  H DL YYES PG Q LH LR+D  +KGG++ ++D  A A+ FRR +P+ F     VPATF+K   + T             NA       + YQRPHI++    E++AV+W+P FEG L +  +D
Sbjct:   83 DGKMSKYHLLHLRTWCLCPQCGHPTGQRLTNCSEVNKSGLDIDKVFVKGD-TLNIVWNDHHESSFSCAWLLA--NSYSEWALDNHARRMATVPLALDA--PVPTTEYANFMDTSNDEGLYEALRQVVENGLTVIRNTPLISGAVKLLAERIAPVSHSLQYGDVFDVMAEPTPVNIAYTSVYLKSHVDLAYYESPPGFQFLHALRYDPSVKGGESTFVDVFAVADEFRRIYPEHFATFTRVPATFKKHHLTRT-------------NATI-----MEYQRPHIQLNHREEVIAVHWSPPFEGPLRVSFED 368          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1011.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C7R7_9STRA1.100e-10751.70Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5KBM7_9PHAE1.210e-9250.67Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FYZ1_ECTSI2.660e-6651.38TauD domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A8K1FLN9_PYTOL1.180e-5536.96Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WUI5_GLOUD1.030e-5337.38Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
W2R732_PHYPN7.590e-5339.14Uncharacterized protein n=16 Tax=Phytophthora TaxI... [more]
A0A5D6XU33_9STRA7.010e-5238.19Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A2D4CIR6_PYTIN7.540e-5137.05Uncharacterized protein n=2 Tax=Pythium insidiosum... [more]
A0A485LE95_9STRA6.450e-5038.31Aste57867_18585 protein n=1 Tax=Aphanomyces stella... [more]
A0A484DY64_BRELC1.170e-4937.22Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1011contigC-australica_Contig_1011:13190..16920 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FYZ1
PFAMsDUF971,TauD
Model size1510
Max annot lvl2759|Eukaryota
KEGG rclassRC00773
KEGG koko:K00474
KEGG ReactionR03451
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
Exons16
Evalue3.25e-69
EggNOG OGsCOG2175@1|root,KOG3889@2759|Eukaryota
EC1.14.11.8
Descriptiontrimethyllysine dioxygenase activity
Cds size963
COG categoryQ
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586747.201895-UTR-C-australica_Contig_1011:13189..132451682586747.201895-UTR-C-australica_Contig_1011:13189..13245Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1011 13190..13245 +
1682586747.2185686-UTR-C-australica_Contig_1011:13307..133311682586747.2185686-UTR-C-australica_Contig_1011:13307..13331Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1011 13308..13331 +
1682586747.352679-UTR-C-australica_Contig_1011:16021..162841682586747.352679-UTR-C-australica_Contig_1011:16021..16284Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1011 16022..16284 +
1682586747.3638077-UTR-C-australica_Contig_1011:16387..164331682586747.3638077-UTR-C-australica_Contig_1011:16387..16433Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1011 16388..16433 +
1682586747.375185-UTR-C-australica_Contig_1011:16639..167061682586747.375185-UTR-C-australica_Contig_1011:16639..16706Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1011 16640..16706 +
1682586747.3827863-UTR-C-australica_Contig_1011:16829..169201682586747.3827863-UTR-C-australica_Contig_1011:16829..16920Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1011 16830..16920 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586747.229017-CDS-C-australica_Contig_1011:13331..134041682586747.229017-CDS-C-australica_Contig_1011:13331..13404Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 13332..13404 +
1682586747.2390842-CDS-C-australica_Contig_1011:13503..135801682586747.2390842-CDS-C-australica_Contig_1011:13503..13580Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 13504..13580 +
1682586747.2489285-CDS-C-australica_Contig_1011:13755..137941682586747.2489285-CDS-C-australica_Contig_1011:13755..13794Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 13756..13794 +
1682586747.2610936-CDS-C-australica_Contig_1011:13879..139531682586747.2610936-CDS-C-australica_Contig_1011:13879..13953Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 13880..13953 +
1682586747.2736418-CDS-C-australica_Contig_1011:14094..142111682586747.2736418-CDS-C-australica_Contig_1011:14094..14211Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 14095..14211 +
1682586747.2814415-CDS-C-australica_Contig_1011:14401..144711682586747.2814415-CDS-C-australica_Contig_1011:14401..14471Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 14402..14471 +
1682586747.2894402-CDS-C-australica_Contig_1011:14613..146851682586747.2894402-CDS-C-australica_Contig_1011:14613..14685Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 14614..14685 +
1682586747.3009667-CDS-C-australica_Contig_1011:14858..149661682586747.3009667-CDS-C-australica_Contig_1011:14858..14966Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 14859..14966 +
1682586747.311953-CDS-C-australica_Contig_1011:15265..153121682586747.311953-CDS-C-australica_Contig_1011:15265..15312Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 15266..15312 +
1682586747.3202913-CDS-C-australica_Contig_1011:15441..155151682586747.3202913-CDS-C-australica_Contig_1011:15441..15515Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 15442..15515 +
1682586747.3292944-CDS-C-australica_Contig_1011:15721..157861682586747.3292944-CDS-C-australica_Contig_1011:15721..15786Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 15722..15786 +
1682586747.3425443-CDS-C-australica_Contig_1011:15874..160211682586747.3425443-CDS-C-australica_Contig_1011:15874..16021Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1011 15875..16021 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1011.6.1prot_C-australica_Contig_1011.6.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1011 13332..16021 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1011.6.1

>prot_C-australica_Contig_1011.6.1 ID=prot_C-australica_Contig_1011.6.1|Name=mRNA_C-australica_Contig_1011.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=321bp
MISPVVAKSIKPTKVVVDGDHTVNVTWSDGHESGFDAEWLRIHDNSVANQ
IEKNHASWPNSLKAWEAIPVVSFKDYMECEKSVHSLLRHINTSGLCIVEG
CGVETDTVQHVAQRIAPLSHSYLYGDSFDVIVQEYARNIAYTHEALPYHQ
DLVYYESAPGLQLLHCLRFDEELKGGKTIWLDALAAANVFRRKHPKEFDV
LKSVPATFQKIRDSVTPEEGDGNDSSATPNAAAASPAHLTYQRPHIEVTA
DGEIVAVNWAPMFEGMLSIPIQDQERSVIIHPSHWACPGSPFNEHSSADT
SSQLWQGFMATFLLHLTVTY*
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mRNA from alignment at C-australica_Contig_1011:13190..16920+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1011.6.1 ID=mRNA_C-australica_Contig_1011.6.1|Name=mRNA_C-australica_Contig_1011.6.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3731bp|location=Sequence derived from alignment at C-australica_Contig_1011:13190..16920+ (Chrysoparadoxa australica CS_1217)
AGGATGGTCACTCCACAGCTTTCAACTACACCTGGCTGAGGGTCAACTGC CCTAGAGTAAGCGTCCGCCCAGCCCTGATTTGAACGAGCTAGTCAGAGTA ACTTGCCCTAATTCGCAGGGCATTCATCCCACTGGGCAGAGAATGATCTC CCCAGTTGTTGCAAAGAGCATCAAACCTACAAAGGTGGTTGTTGATGGTG ACCATACAGTCAACGGTATGCTTTTACCATGAAATTGCTCCCCCCCCTGC TTCCTCAAGCCTCAACCACCCTGTCACATACTTGTTCCTTTTTTCACATG TTGCTGTTGCTTAGTTACTTGGTCTGACGGCCATGAGAGCGGATTTGATG CTGAGTGGCTGCGGATACATGACAACAGCGTTGCCAACCAGGTGAAGGCC CAACCATGCGTTGGTCGTTAAAGCAATTATGGCTGGATGAAACAAATCCT GTGTGACGCACTTGTAGCAATCAATCTCCTGCAGCTGCTCAAACCTTCCC TTCCCTTCCCTTTCCATGGCATGTACAACAATCGCTGATATCACTGATAA CTGACTCCTCTGACAGATTGAGAAGAACCATGCAAGTTGGCCCAATTCGC TGAAAGTAAGGCGTGTTTTGAATTGTTAACATGCCAGCAGCTGACGATAT ATATGCCACCTTTACCCTCACCCTAACTTTCTCCCATTAGGCTTGGGAAG CTATACCCGTTGTTAGCTTTAAGGATTATATGGAGTGCGAGAAGTCAGTC CACAGCTTGCTCAGGTAGTGTCAAACCAAACCAAACCAAACCCAAGGAAG AACATGAGTGGAATGAGAGTTGAGGACTAGCTACTGAGGCAGTGGCGGTT TCGGGGCTTGTGTGACTCAACCTCACCCTTTTCTGTCTTTGGCATGTGTT GGCAGGCATATAAATACTTCTGGTTTGTGCATAGTTGAGGGTTGTGGTGT AGAGACAGATACCGTGCAACACGTTGCGCAGCGCATTGCGCCATTGAGTC ACTCCTACCTTTATGGAGACAGGCGAGTCAACCAGCTACTAGCTACCAGT AGTTGTGCCGAGGGCTTAGGAGTTTAGGTATCAGTTACCCGTCTTCAAAA GCCATCACAGTTGCCACCAGCAGCTTCAGTCACTAACACGCAATATGGTA CAAGTGCTGTTGAGTGGAGGGAATCTCTCCCACGTCTTCTCTAAACACGC TTCGTGATGCAGTTTTGACGTAATTGTCCAGGAATATGCGCGCAACATTG CCTACACTCACGAGGCATTGCCTTATCATCAAGTATGTGGGAGTACTCCA CCTAATAGTCAGATAGCAGATACTCCTCGCATTGTGACTGCCTCTGAGCT TGTCCCAGCTATACTCGGCTTGGCTCTACCTTGTTTTATACTAAGATTTG CTCCACGTCATTGCACATCTGCAGGACCTGGTTTACTATGAATCGGCACC TGGATTGCAGCTGCTTCATTGCCTGCGGTTTGATGAGGAACTGAAGGTAC CGGTGCCAACTGAGCAGATCAGCCAGCATTGATGGACCATGTGCACTGAT GGATCTTAAGTTTATCCATGTAACATGCACTCTGCTAGCTGGGCGGCCCG GCCCTTTTGGATGGGACTGCACACCCTTAGATGCTTACTCGCTCACAGAC TTTCCTCCATATGATGCAGGGTGGCAAAACAATTTGGTTGGATGCGTTGG CGGCAGCCAATGTCTTTCGACGCAAGCATCCCAAAGAATTTGACGTGTTA AAATCTGTACCTGCAACCTTCCAGAAGGTAAGCTGAGCTGCAAGGCCAGG GTTCGCATCCTGTTTAAGAGTTAAAGCTGTAAAGTCTCACCGTTGAGCCT GCAATGGCATTGCCCAGGAGCTGCACTAGCTCTCTCTCATCCCAGCTCAG TAGCTCTGACTCGTCACCTTATGAGAGCACATTCAAAGCAAAAGACTAAC TAACCAGAATCTAGTGCGTAAAGCTGTCAGCCTATCAGCCTCTCAGCCTG TGAGCTTCTCTCCTATCACCTGCAGCTACAACTCCTTCATAACCTAGGCC TACTCTTCTTCGCTGCCTCCTTTCAGATCAGAGATTCTGTCACTCCTGAG GAAGGAGATGGAAACGACTCAAGGTAACGTTAACTTACAGACGTCTCGCC TCACCTTCACAGCTTACACACTGACATGTTATATATGTTATATGTTCTCT TATGCTCTAACCTCTCGTGGTGCCTCAACTCATGTGCCTGGTCTGCCATC AGTGCAACGCCCAATGCAGCAGCAGCCAGTCCTGCCCACCTCACCTACCA GCGGCCGCACATCGAGGTGACTGCAGGTAAGAAGGCGTGAAACGGTGTGC AAAGATGTGAATAGCTCTGGCCCTGGCTGGGGTCAACAGGCGTGTATGCC TCAGCATGATGACGTGGAGTTTGTTGTGGCATTGCCTTTGACTCCTCTTG CCATGCACCTCACACATTTCATTTCGCATGACACCTGCTAACTGATAACT TTGACTTGCGCTAACCGATACTGATAACTCAGATGGGGAAATAGTAGCTG TGAACTGGGCGCCTATGTTTGAGGGGATGCTTTCCATCCCTATTCAGGTA ACATGATTGCACGACACCATGACCCTGTAGATGAGTGGGTCTGACTCTAA TGCAATACCTTCTTGACTGTCCTTGCCTTGTGTAGGACCAAGAAAGGTCG GTTATCATTCACCCTTCACACTGGGCATGTCCAGGCTCTCCTTTTAATGA GCACAGTTCTGCAGACACAAGCAGCCAGCTGTGGCAGGGCTTTATGGCAA CATTCCTGCTCCACCTAACCGTAACATATTGACCTGATGAGGCCAGCTAG CACACTCAAAGTTGAAGAAGCTGCCACTCAACGCGCCTATTAGCGAGTAG TTACTAATGATAATTGGTTACTGTTGATAATTTTCTCCCAATCTTTTCCT CTCGTCTAAGCTCTTGCCTGCTGACGCTCTCTTCCATCCTTGCAGCTACT ATGATGCATATGTAAAGTTTGCAGAGCTGGTGGAGAACAGTGAGTTCTCT CAAGAGCACACCATTAGGCACAGGCTGAAACCTGGTCAATGCGTGGTGGG TGTCCATGCGACTAGTTTAGTAGTGACCCAGTAGGCAGGAACCCAGTAGT TACTAGTATACATCCACCTGCCTAAACATTTTCATCTCAAACAAACAGGT GTTTAACAACAGGAGGATGCTCCACGGCCGTGATGCTAAGCCAGGTAGGT AGCCCCACCTTGACTGACCTTGAACAACTGCAAAGAATAACACGCAAAAT TAAACTAGTTGTAACGCTTCTAGCACCACCTCAACCTGGATACTGTTCTT ATTCCATAACTTGGTAGGTTTGCTTGTATACTCAGAATGGCCAGCCATGA CCAGCCATGACCCATATTAGCCTAGTACTGAGTACATCTACCCCATCCAG AACCCGGGGAGCCAGGACAGAGACACTTCCAGGGCTGCTATCTCAATATG GATGAGACTATCAGTAGGTGATAGCTCATCTTTGACTTGCAACCGAGCCC CAGCTACGAGTATTAGTCCAATCCCTGGCATAATACTCGTTTCCTCATCC AATGACTTAGTAAGTTATCTGTTTGCACATGGGTGGCCAGGTTTAACGTT ATGGAGGGAGAGCTTGGTGACAGCAGGTACCAGACCAAGAGATGGGGGAA TGGCACCAACTTGCAGCCGTTCAAGAAGTCC
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Coding sequence (CDS) from alignment at C-australica_Contig_1011:13190..16920+

>mRNA_C-australica_Contig_1011.6.1 ID=mRNA_C-australica_Contig_1011.6.1|Name=mRNA_C-australica_Contig_1011.6.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=963bp|location=Sequence derived from alignment at C-australica_Contig_1011:13190..16920+ (Chrysoparadoxa australica CS_1217)
ATGATCTCCCCAGTTGTTGCAAAGAGCATCAAACCTACAAAGGTGGTTGT
TGATGGTGACCATACAGTCAACGTTACTTGGTCTGACGGCCATGAGAGCG
GATTTGATGCTGAGTGGCTGCGGATACATGACAACAGCGTTGCCAACCAG
ATTGAGAAGAACCATGCAAGTTGGCCCAATTCGCTGAAAGCTTGGGAAGC
TATACCCGTTGTTAGCTTTAAGGATTATATGGAGTGCGAGAAGTCAGTCC
ACAGCTTGCTCAGGCATATAAATACTTCTGGTTTGTGCATAGTTGAGGGT
TGTGGTGTAGAGACAGATACCGTGCAACACGTTGCGCAGCGCATTGCGCC
ATTGAGTCACTCCTACCTTTATGGAGACAGTTTTGACGTAATTGTCCAGG
AATATGCGCGCAACATTGCCTACACTCACGAGGCATTGCCTTATCATCAA
GACCTGGTTTACTATGAATCGGCACCTGGATTGCAGCTGCTTCATTGCCT
GCGGTTTGATGAGGAACTGAAGGGTGGCAAAACAATTTGGTTGGATGCGT
TGGCGGCAGCCAATGTCTTTCGACGCAAGCATCCCAAAGAATTTGACGTG
TTAAAATCTGTACCTGCAACCTTCCAGAAGATCAGAGATTCTGTCACTCC
TGAGGAAGGAGATGGAAACGACTCAAGTGCAACGCCCAATGCAGCAGCAG
CCAGTCCTGCCCACCTCACCTACCAGCGGCCGCACATCGAGGTGACTGCA
GATGGGGAAATAGTAGCTGTGAACTGGGCGCCTATGTTTGAGGGGATGCT
TTCCATCCCTATTCAGGACCAAGAAAGGTCGGTTATCATTCACCCTTCAC
ACTGGGCATGTCCAGGCTCTCCTTTTAATGAGCACAGTTCTGCAGACACA
AGCAGCCAGCTGTGGCAGGGCTTTATGGCAACATTCCTGCTCCACCTAAC
CGTAACATATTGA
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