mRNA_C-australica_Contig_10103.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_10103.1.1
Unique NamemRNA_C-australica_Contig_10103.1.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A1B6YDA9_9BACT (Polyribonucleotide nucleotidyltransferase n=4 Tax=unclassified Balneola TaxID=2615059 RepID=A0A1B6YDA9_9BACT)

HSP 1 Score: 496 bits (1276), Expect = 2.980e-170
Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 1
Query:    1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKED 792
            SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSP+E+ISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEED  GKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKED
Sbjct:  440 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPKESISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDDKGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKED 703          
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: UPI00036A2585 (polyribonucleotide nucleotidyltransferase n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI00036A2585)

HSP 1 Score: 467 bits (1202), Expect = 4.650e-159
Identity = 239/264 (90.53%), Postives = 256/264 (96.97%), Query Frame = 1
Query:    1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKED 792
            SSMASVCGGSMALMDAGVP+KKPVAGIAMGMIVG++NT +LSDIRGEEDFMGDMDFKTAGT+DGITACQMDMKVQGISFE IEEALEQAH GR+HILG+MA+TIS+PR  IS+YAPQF++MEIDGSDIGAVIGPGGKVIQTLQKETGTEI+IEED+NGKGQ+TISANDLDKAEEAK RIKMIVGHLEEGATYKGVVKSIKDFGAF+EVAPGKDGLLHISEIDH RVEKVTDYL LGDEIEVKLLKVEHGGKLRLSRKALIE+ED
Sbjct:  440 SSMASVCGGSMALMDAGVPLKKPVAGIAMGMIVGENNTVVLSDIRGEEDFMGDMDFKTAGTADGITACQMDMKVQGISFEIIEEALEQAHAGRMHILGKMAETISTPRTEISKYAPQFIKMEIDGSDIGAVIGPGGKVIQTLQKETGTEIIIEEDANGKGQVTISANDLDKAEEAKNRIKMIVGHLEEGATYKGVVKSIKDFGAFIEVAPGKDGLLHISEIDHKRVEKVTDYLQLGDEIEVKLLKVEHGGKLRLSRKALIERED 703          
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A3M8FQ73_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8FQ73_9BACT)

HSP 1 Score: 463 bits (1191), Expect = 2.330e-157
Identity = 239/263 (90.87%), Postives = 254/263 (96.58%), Query Frame = 1
Query:    1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKE 789
            SSMASVCGGSMALMDAGVP+KKPVAGIAMGMIVG++ T +LSDIRGEEDFMGDMDFKTAG+S+GITACQMDMKVQGISFE IE+ALEQAH GR+HILGEM KTISS RE+ISQYAPQFL+MEIDGSDIGAVIGPGGKVIQTLQKETGTEI+IEEDSNGKGQ+TISANDL KAEEAKKRIKMIVGHLEEGA YKG+VKSIKDFGAFVEVAPGKDGLLHISEIDH RVEKV+DYLSLGDEIEVKLLKVEHGGKLRLSRKALIE+E
Sbjct:  444 SSMASVCGGSMALMDAGVPLKKPVAGIAMGMIVGENKTVVLSDIRGEEDFMGDMDFKTAGSSEGITACQMDMKVQGISFEIIEQALEQAHTGRIHILGEMVKTISSARESISQYAPQFLKMEIDGSDIGAVIGPGGKVIQTLQKETGTEIIIEEDSNGKGQVTISANDLSKAEEAKKRIKMIVGHLEEGAVYKGIVKSIKDFGAFVEVAPGKDGLLHISEIDHKRVEKVSDYLSLGDEIEVKLLKVEHGGKLRLSRKALIERE 706          
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A2D7AEF0_9BACT (Polyribonucleotide nucleotidyltransferase n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2D7AEF0_9BACT)

HSP 1 Score: 424 bits (1091), Expect = 2.410e-142
Identity = 223/263 (84.79%), Postives = 241/263 (91.63%), Query Frame = 1
Query:    1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKE 789
            SSMASVCGGS+ALMDAGVP+KKPVAGIAMGMIVG ++T +LSDIRGEEDFMGDMDFKTAG+ DGITACQMDMKVQGISFE IEEALEQA  GRLHIL  MA++IS  R  +SQYAPQ L+MEIDGSD GAV GPGGKVIQTLQKETGTEI+IEE+  GKG ITISANDL KAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDH RVEKV+DYL+LGDEI+V LLKVEHGGKLRLSRKAL+ ++
Sbjct:  440 SSMASVCGGSLALMDAGVPLKKPVAGIAMGMIVGDEHTVVLSDIRGEEDFMGDMDFKTAGSVDGITACQMDMKVQGISFEIIEEALEQARVGRLHILERMAESISVARTELSQYAPQXLKMEIDGSDXGAVXGPGGKVIQTLQKETGTEIIIEENDKGKGVITISANDLAKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHKRVEKVSDYLALGDEIDVVLLKVEHGGKLRLSRKALMPRD 702          
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A6A8Q9V3_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q9V3_9BACT)

HSP 1 Score: 419 bits (1076), Expect = 4.250e-140
Identity = 214/263 (81.37%), Postives = 243/263 (92.40%), Query Frame = 1
Query:    1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKE 789
            SSMASVCGGSMALMDAGVP+KKPVAGIAMGMIVG + T +LSDIRGEEDFMGDMDFKTAGT+DGIT+CQMDMKV GISFE IEEALEQAH+GR+HILG+MA+TIS+ RE++S++APQF++MEIDG  IGAVIGPGGKVIQTLQKET TEI IEED  GKGQITISA+ L+KA++A+ RIK I GHL+EGATYKGVVKSIKDFGAFVEVAPG+DGLLHISEIDH  V+KV+DYLS+GDE++VKLLK+E G KLRLSRKALIEKE
Sbjct:  438 SSMASVCGGSMALMDAGVPLKKPVAGIAMGMIVGDEETVVLSDIRGEEDFMGDMDFKTAGTADGITSCQMDMKVGGISFEIIEEALEQAHEGRMHILGKMAETISTARESLSEFAPQFVKMEIDGDMIGAVIGPGGKVIQTLQKETDTEIWIEEDEQGKGQITISADSLEKAQDAQSRIKAITGHLDEGATYKGVVKSIKDFGAFVEVAPGRDGLLHISEIDHKHVDKVSDYLSVGDELDVKLLKIEPGNKLRLSRKALIEKE 700          
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A316TQA8_9BACT (Polyribonucleotide nucleotidyltransferase n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A316TQA8_9BACT)

HSP 1 Score: 404 bits (1039), Expect = 1.760e-134
Identity = 209/260 (80.38%), Postives = 235/260 (90.38%), Query Frame = 1
Query:    1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALI 780
            SSMASVCGGSMALMDAGVP+ KPVAGIAMGMIVG++NT +LSDI+GEEDFMGDMDFKTAGTSDGITA QMDMKVQGISFE IE+ALEQAH GR+HIL +MA+TIS+ RE++S+YAPQFLRM IDG  IGAVIGPGGKVIQTLQKET TEI IEED  GKGQITISA+ LDKAE AKKRI+ I G L+EGATYKG VK+IK++GAFVE+ PGK+GLLHISE++H  V+KV D LS+GDEIEVKLLKVEHGGKLRLSRKAL+
Sbjct:  440 SSMASVCGGSMALMDAGVPLPKPVAGIAMGMIVGENNTVVLSDIQGEEDFMGDMDFKTAGTSDGITATQMDMKVQGISFEIIEKALEQAHSGRMHILEKMAETISASRESLSKYAPQFLRMTIDGDSIGAVIGPGGKVIQTLQKETDTEIWIEEDEQGKGQITISADSLDKAENAKKRIQAIAGQLDEGATYKGTVKAIKEYGAFVEIVPGKEGLLHISELEHGHVKKVEDVLSVGDEIEVKLLKVEHGGKLRLSRKALL 699          
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A2E6N4B9_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2E6N4B9_9BACT)

HSP 1 Score: 404 bits (1038), Expect = 2.280e-134
Identity = 215/263 (81.75%), Postives = 230/263 (87.45%), Query Frame = 1
Query:    1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKE 789
            SSMASVCGGS ALMDAGVP+KKPVAG AMGM VG++NT +LSDIRGEE FMGDMDFKTAG+ DGITACQMDMKVQGISF   EEALEQA  GRLHIL  MA++IS  R  +S YAPQFL+MEIDGSD GAVIGPGGKVIQTLQKETGTEI+IEE   GKG ITISANDL  AE+AKKRIKMIVGHLEEGATYKG VKS KDFGAFVEVAPGKDGLLHISE DH RV KV+ YL+LGDEIEV LLKVEHGGKLRLSRKALI ++
Sbjct:  440 SSMASVCGGSXALMDAGVPLKKPVAGXAMGMXVGEENTXVLSDIRGEEXFMGDMDFKTAGSVDGITACQMDMKVQGISFXIXEEALEQARVGRLHILEXMAESISMARPXLSXYAPQFLKMEIDGSDXGAVIGPGGKVIQTLQKETGTEIIIEEXDKGKGVITISANDLAXAEDAKKRIKMIVGHLEEGATYKGXVKSXKDFGAFVEVAPGKDGLLHISEXDHKRVXKVSXYLTLGDEIEVVLLKVEHGGKLRLSRKALIPRD 702          
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A2A2GAV8_9BACT (Polyribonucleotide nucleotidyltransferase n=3 Tax=Aliifodinibius TaxID=1397107 RepID=A0A2A2GAV8_9BACT)

HSP 1 Score: 403 bits (1036), Expect = 5.100e-134
Identity = 207/264 (78.41%), Postives = 237/264 (89.77%), Query Frame = 1
Query:    1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSN-GKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKE 789
            SSMASVCGGSMALMDAGVP+KKPVAGIAMGMIVG+DN  +LSDIRGEEDFMGDMDFKTAG+ DGITACQMDMKV GISFE +EEALEQA KGRLHIL +M +TIS PRE IS++APQF++MEI+  DIG+VIGPGGKVIQTLQKET TEI +EED   GKG+ITISA+ L  AEEAKKRI+ IVGHL+EGATY+G VK+IKD+GAFVE+ PGKDGLLH+SEI+H+ V+ V+D LS+GDE+EVKLLKVEHGGKLRLSRKALI K+
Sbjct:  439 SSMASVCGGSMALMDAGVPLKKPVAGIAMGMIVGEDNEVVLSDIRGEEDFMGDMDFKTAGSRDGITACQMDMKVSGISFEKLEEALEQARKGRLHILDKMEETISEPREQISEFAPQFVKMEIEADDIGSVIGPGGKVIQTLQKETNTEIWVEEDEERGKGKITISADKLSNAEEAKKRIQGIVGHLDEGATYQGTVKAIKDYGAFVEIVPGKDGLLHVSEINHSHVDNVSDVLSVGDELEVKLLKVEHGGKLRLSRKALIPKD 702          
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A6M1SYT3_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1SYT3_9BACT)

HSP 1 Score: 402 bits (1034), Expect = 1.050e-133
Identity = 207/263 (78.71%), Postives = 239/263 (90.87%), Query Frame = 1
Query:    1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSN-GKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEK 786
            SSMASVCGGSMALMDAGVP+KKPVAGIAMGMIVG+++  +LSDIRGEEDFMGDMDFKTAG+S+G+TACQMDMKV+GISFE +EEAL+QAH+GRLHIL +MA+TIS P++NIS+YAPQF+ M IDG  IGAVIGPGGKVIQTLQKET TEI +EED   GKG+ITI+ANDL KAEEAKKRI+ IVG L+EGATY+GVVK+IK++GAFVE+ PGKDGLLH+SEI H  V+ V+D LS+GDEIEVKLLKVEHGGKLRLSRKALI K
Sbjct:  440 SSMASVCGGSMALMDAGVPLKKPVAGIAMGMIVGENDQVVLSDIRGEEDFMGDMDFKTAGSSEGLTACQMDMKVRGISFEVLEEALQQAHEGRLHILEKMAETISRPKDNISEYAPQFINMTIDGDQIGAVIGPGGKVIQTLQKETDTEIWVEEDDETGKGKITITANDLAKAEEAKKRIQGIVGQLDEGATYQGVVKAIKEYGAFVEIVPGKDGLLHVSEISHEHVKNVSDVLSVGDEIEVKLLKVEHGGKLRLSRKALIPK 702          
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A2D9FU35_9BACT (Polyribonucleotide nucleotidyltransferase n=9 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FU35_9BACT)

HSP 1 Score: 402 bits (1033), Expect = 1.360e-133
Identity = 206/265 (77.74%), Postives = 239/265 (90.19%), Query Frame = 1
Query:    1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSN-GKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKED 792
            SSMASVCGGSMA+MDAGVP+KKPVAGIAMGMIVG++N+ +LSDIRGEEDFMGDMDFKTAGT+DGITACQMDMKVQGISFE +EEAL+QAH GRLHILG+MA+TIS+PREN+S++APQF+ M IDG  IGAVIGPGGKVIQTLQKET TEI IEED   GKG+ITISA+ LDKAE A++RIK I G LEEGA YKG VK+IKDFGAFVE+APG+DGLLHISE+D+  V+ V DY+S+GDEIEVKLLK+E G KLRLSRKAL++ ++
Sbjct:  438 SSMASVCGGSMAMMDAGVPLKKPVAGIAMGMIVGENNSVVLSDIRGEEDFMGDMDFKTAGTADGITACQMDMKVQGISFEVMEEALKQAHTGRLHILGKMAETISTPRENLSEFAPQFINMTIDGDMIGAVIGPGGKVIQTLQKETDTEIWIEEDDETGKGKITISADSLDKAEAAQERIKAITGQLEEGAIYKGTVKTIKDFGAFVEIAPGRDGLLHISEVDNKHVKDVNDYMSVGDEIEVKLLKIEPGNKLRLSRKALLDNDE 702          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1B6YDA9_9BACT2.980e-17098.48Polyribonucleotide nucleotidyltransferase n=4 Tax=... [more]
UPI00036A25854.650e-15990.53polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A3M8FQ73_9BACT2.330e-15790.87Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A2D7AEF0_9BACT2.410e-14284.79Polyribonucleotide nucleotidyltransferase n=3 Tax=... [more]
A0A6A8Q9V3_9BACT4.250e-14081.37Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A316TQA8_9BACT1.760e-13480.38Polyribonucleotide nucleotidyltransferase n=2 Tax=... [more]
A0A2E6N4B9_9BACT2.280e-13481.75Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A2A2GAV8_9BACT5.100e-13478.41Polyribonucleotide nucleotidyltransferase n=3 Tax=... [more]
A0A6M1SYT3_9BACT1.050e-13378.71Polyribonucleotide nucleotidyltransferase n=1 Tax=... [more]
A0A2D9FU35_9BACT1.360e-13377.74Polyribonucleotide nucleotidyltransferase n=9 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_10103contigC-australica_Contig_10103:45..839 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1121104.AQXH01000001_gene852
Preferred namepnp
PFAMsKH_1,PNPase,RNase_PH,RNase_PH_C,S1
Model size795
Max annot lvl976|Bacteroidetes
KEGG rclassRC02795
KEGG koko:K00962
KEGG ReactionR00437,R00438,R00439,R00440
KEGG Pathwayko00230,ko00240,ko03018,map00230,map00240,map03018
KEGG ModuleM00394
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.83e-159
EggNOG OGsCOG1185@1|root,COG1185@2|Bacteria,4NE4Q@976|Bacteroidetes,1INMK@117747|Sphingobacteriia
EC2.7.7.8
DescriptionInvolved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'-direction
Cds size789
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko03016,ko03019
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586746.685161-CDS-C-australica_Contig_10103:44..8331682586746.685161-CDS-C-australica_Contig_10103:44..833Chrysoparadoxa australica CS_1217CDSC-australica_Contig_10103 45..833 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586746.6992154-UTR-C-australica_Contig_10103:833..8391682586746.6992154-UTR-C-australica_Contig_10103:833..839Chrysoparadoxa australica CS_1217UTRC-australica_Contig_10103 834..839 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_10103.1.1prot_C-australica_Contig_10103.1.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_10103 45..833 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_10103.1.1

>prot_C-australica_Contig_10103.1.1 ID=prot_C-australica_Contig_10103.1.1|Name=mRNA_C-australica_Contig_10103.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=263bp
MASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMG
DMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAK
TISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMI
EEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDF
GAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKL
RLSRKALIEKED*
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mRNA from alignment at C-australica_Contig_10103:45..839-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_10103.1.1 ID=mRNA_C-australica_Contig_10103.1.1|Name=mRNA_C-australica_Contig_10103.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=795bp|location=Sequence derived from alignment at C-australica_Contig_10103:45..839- (Chrysoparadoxa australica CS_1217)
TCTTCAATGGCTTCTGTTTGTGGTGGTTCAATGGCTCTTATGGACGCTGG TGTACCGATCAAAAAGCCGGTTGCAGGTATTGCAATGGGAATGATCGTTG GAAAAGACAACACAGCAATTCTATCTGATATTCGTGGGGAAGAAGATTTC ATGGGTGACATGGACTTCAAAACTGCTGGAACATCAGACGGTATCACTGC TTGCCAAATGGATATGAAAGTTCAGGGCATCAGCTTTGAAACTATCGAAG AAGCTCTTGAACAAGCTCATAAAGGTAGATTACATATTCTTGGCGAAATG GCTAAAACTATTTCTTCACCAAGAGAAAATATTTCACAATACGCTCCTCA GTTCCTGAGAATGGAAATTGATGGTAGTGATATTGGTGCTGTAATCGGGC CTGGTGGTAAAGTGATTCAAACACTTCAGAAAGAAACCGGAACTGAAATT ATGATCGAAGAAGATTCGAATGGTAAAGGTCAGATCACGATTTCAGCTAA CGATCTTGACAAAGCTGAAGAAGCCAAGAAAAGGATCAAAATGATTGTTG GTCATCTTGAAGAAGGTGCTACTTACAAAGGTGTCGTTAAGTCAATCAAA GACTTTGGTGCTTTTGTTGAAGTTGCTCCGGGCAAAGACGGACTACTTCA TATTTCAGAGATCGATCACACACGTGTAGAGAAAGTTACAGACTATCTAT CGTTAGGTGATGAGATCGAAGTTAAACTTCTGAAAGTTGAACATGGCGGA AAACTTCGTCTGTCCAGAAAAGCATTGATCGAAAAAGAAGATTAA
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Coding sequence (CDS) from alignment at C-australica_Contig_10103:45..839-

>mRNA_C-australica_Contig_10103.1.1 ID=mRNA_C-australica_Contig_10103.1.1|Name=mRNA_C-australica_Contig_10103.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=789bp|location=Sequence derived from alignment at C-australica_Contig_10103:45..839- (Chrysoparadoxa australica CS_1217)
ATGGCTTCTGTTTGTGGTGGTTCAATGGCTCTTATGGACGCTGGTGTACC
GATCAAAAAGCCGGTTGCAGGTATTGCAATGGGAATGATCGTTGGAAAAG
ACAACACAGCAATTCTATCTGATATTCGTGGGGAAGAAGATTTCATGGGT
GACATGGACTTCAAAACTGCTGGAACATCAGACGGTATCACTGCTTGCCA
AATGGATATGAAAGTTCAGGGCATCAGCTTTGAAACTATCGAAGAAGCTC
TTGAACAAGCTCATAAAGGTAGATTACATATTCTTGGCGAAATGGCTAAA
ACTATTTCTTCACCAAGAGAAAATATTTCACAATACGCTCCTCAGTTCCT
GAGAATGGAAATTGATGGTAGTGATATTGGTGCTGTAATCGGGCCTGGTG
GTAAAGTGATTCAAACACTTCAGAAAGAAACCGGAACTGAAATTATGATC
GAAGAAGATTCGAATGGTAAAGGTCAGATCACGATTTCAGCTAACGATCT
TGACAAAGCTGAAGAAGCCAAGAAAAGGATCAAAATGATTGTTGGTCATC
TTGAAGAAGGTGCTACTTACAAAGGTGTCGTTAAGTCAATCAAAGACTTT
GGTGCTTTTGTTGAAGTTGCTCCGGGCAAAGACGGACTACTTCATATTTC
AGAGATCGATCACACACGTGTAGAGAAAGTTACAGACTATCTATCGTTAG
GTGATGAGATCGAAGTTAAACTTCTGAAAGTTGAACATGGCGGAAAACTT
CGTCTGTCCAGAAAAGCATTGATCGAAAAAGAAGATTAA
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