mRNA_C-australica_Contig_10103.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A1B6YDA9_9BACT (Polyribonucleotide nucleotidyltransferase n=4 Tax=unclassified Balneola TaxID=2615059 RepID=A0A1B6YDA9_9BACT) HSP 1 Score: 496 bits (1276), Expect = 2.980e-170 Identity = 260/264 (98.48%), Postives = 262/264 (99.24%), Query Frame = 1 Query: 1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKED 792 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSP+E+ISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEED GKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKED Sbjct: 440 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPKESISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDDKGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKED 703
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: UPI00036A2585 (polyribonucleotide nucleotidyltransferase n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI00036A2585) HSP 1 Score: 467 bits (1202), Expect = 4.650e-159 Identity = 239/264 (90.53%), Postives = 256/264 (96.97%), Query Frame = 1 Query: 1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKED 792 SSMASVCGGSMALMDAGVP+KKPVAGIAMGMIVG++NT +LSDIRGEEDFMGDMDFKTAGT+DGITACQMDMKVQGISFE IEEALEQAH GR+HILG+MA+TIS+PR IS+YAPQF++MEIDGSDIGAVIGPGGKVIQTLQKETGTEI+IEED+NGKGQ+TISANDLDKAEEAK RIKMIVGHLEEGATYKGVVKSIKDFGAF+EVAPGKDGLLHISEIDH RVEKVTDYL LGDEIEVKLLKVEHGGKLRLSRKALIE+ED Sbjct: 440 SSMASVCGGSMALMDAGVPLKKPVAGIAMGMIVGENNTVVLSDIRGEEDFMGDMDFKTAGTADGITACQMDMKVQGISFEIIEEALEQAHAGRMHILGKMAETISTPRTEISKYAPQFIKMEIDGSDIGAVIGPGGKVIQTLQKETGTEIIIEEDANGKGQVTISANDLDKAEEAKNRIKMIVGHLEEGATYKGVVKSIKDFGAFIEVAPGKDGLLHISEIDHKRVEKVTDYLQLGDEIEVKLLKVEHGGKLRLSRKALIERED 703
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A3M8FQ73_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A3M8FQ73_9BACT) HSP 1 Score: 463 bits (1191), Expect = 2.330e-157 Identity = 239/263 (90.87%), Postives = 254/263 (96.58%), Query Frame = 1 Query: 1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKE 789 SSMASVCGGSMALMDAGVP+KKPVAGIAMGMIVG++ T +LSDIRGEEDFMGDMDFKTAG+S+GITACQMDMKVQGISFE IE+ALEQAH GR+HILGEM KTISS RE+ISQYAPQFL+MEIDGSDIGAVIGPGGKVIQTLQKETGTEI+IEEDSNGKGQ+TISANDL KAEEAKKRIKMIVGHLEEGA YKG+VKSIKDFGAFVEVAPGKDGLLHISEIDH RVEKV+DYLSLGDEIEVKLLKVEHGGKLRLSRKALIE+E Sbjct: 444 SSMASVCGGSMALMDAGVPLKKPVAGIAMGMIVGENKTVVLSDIRGEEDFMGDMDFKTAGSSEGITACQMDMKVQGISFEIIEQALEQAHTGRIHILGEMVKTISSARESISQYAPQFLKMEIDGSDIGAVIGPGGKVIQTLQKETGTEIIIEEDSNGKGQVTISANDLSKAEEAKKRIKMIVGHLEEGAVYKGIVKSIKDFGAFVEVAPGKDGLLHISEIDHKRVEKVSDYLSLGDEIEVKLLKVEHGGKLRLSRKALIERE 706
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A2D7AEF0_9BACT (Polyribonucleotide nucleotidyltransferase n=3 Tax=Bacteroidetes/Chlorobi group TaxID=68336 RepID=A0A2D7AEF0_9BACT) HSP 1 Score: 424 bits (1091), Expect = 2.410e-142 Identity = 223/263 (84.79%), Postives = 241/263 (91.63%), Query Frame = 1 Query: 1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKE 789 SSMASVCGGS+ALMDAGVP+KKPVAGIAMGMIVG ++T +LSDIRGEEDFMGDMDFKTAG+ DGITACQMDMKVQGISFE IEEALEQA GRLHIL MA++IS R +SQYAPQ L+MEIDGSD GAV GPGGKVIQTLQKETGTEI+IEE+ GKG ITISANDL KAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDH RVEKV+DYL+LGDEI+V LLKVEHGGKLRLSRKAL+ ++ Sbjct: 440 SSMASVCGGSLALMDAGVPLKKPVAGIAMGMIVGDEHTVVLSDIRGEEDFMGDMDFKTAGSVDGITACQMDMKVQGISFEIIEEALEQARVGRLHILERMAESISVARTELSQYAPQXLKMEIDGSDXGAVXGPGGKVIQTLQKETGTEIIIEENDKGKGVITISANDLAKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHKRVEKVSDYLALGDEIDVVLLKVEHGGKLRLSRKALMPRD 702
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A6A8Q9V3_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Balneolaceae bacterium TaxID=2053516 RepID=A0A6A8Q9V3_9BACT) HSP 1 Score: 419 bits (1076), Expect = 4.250e-140 Identity = 214/263 (81.37%), Postives = 243/263 (92.40%), Query Frame = 1 Query: 1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKE 789 SSMASVCGGSMALMDAGVP+KKPVAGIAMGMIVG + T +LSDIRGEEDFMGDMDFKTAGT+DGIT+CQMDMKV GISFE IEEALEQAH+GR+HILG+MA+TIS+ RE++S++APQF++MEIDG IGAVIGPGGKVIQTLQKET TEI IEED GKGQITISA+ L+KA++A+ RIK I GHL+EGATYKGVVKSIKDFGAFVEVAPG+DGLLHISEIDH V+KV+DYLS+GDE++VKLLK+E G KLRLSRKALIEKE Sbjct: 438 SSMASVCGGSMALMDAGVPLKKPVAGIAMGMIVGDEETVVLSDIRGEEDFMGDMDFKTAGTADGITSCQMDMKVGGISFEIIEEALEQAHEGRMHILGKMAETISTARESLSEFAPQFVKMEIDGDMIGAVIGPGGKVIQTLQKETDTEIWIEEDEQGKGQITISADSLEKAQDAQSRIKAITGHLDEGATYKGVVKSIKDFGAFVEVAPGRDGLLHISEIDHKHVDKVSDYLSVGDELDVKLLKIEPGNKLRLSRKALIEKE 700
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A316TQA8_9BACT (Polyribonucleotide nucleotidyltransferase n=2 Tax=Balneolaceae TaxID=1813606 RepID=A0A316TQA8_9BACT) HSP 1 Score: 404 bits (1039), Expect = 1.760e-134 Identity = 209/260 (80.38%), Postives = 235/260 (90.38%), Query Frame = 1 Query: 1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALI 780 SSMASVCGGSMALMDAGVP+ KPVAGIAMGMIVG++NT +LSDI+GEEDFMGDMDFKTAGTSDGITA QMDMKVQGISFE IE+ALEQAH GR+HIL +MA+TIS+ RE++S+YAPQFLRM IDG IGAVIGPGGKVIQTLQKET TEI IEED GKGQITISA+ LDKAE AKKRI+ I G L+EGATYKG VK+IK++GAFVE+ PGK+GLLHISE++H V+KV D LS+GDEIEVKLLKVEHGGKLRLSRKAL+ Sbjct: 440 SSMASVCGGSMALMDAGVPLPKPVAGIAMGMIVGENNTVVLSDIQGEEDFMGDMDFKTAGTSDGITATQMDMKVQGISFEIIEKALEQAHSGRMHILEKMAETISASRESLSKYAPQFLRMTIDGDSIGAVIGPGGKVIQTLQKETDTEIWIEEDEQGKGQITISADSLDKAENAKKRIQAIAGQLDEGATYKGTVKAIKEYGAFVEIVPGKEGLLHISELEHGHVKKVEDVLSVGDEIEVKLLKVEHGGKLRLSRKALL 699
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A2E6N4B9_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Balneola sp. TaxID=2024824 RepID=A0A2E6N4B9_9BACT) HSP 1 Score: 404 bits (1038), Expect = 2.280e-134 Identity = 215/263 (81.75%), Postives = 230/263 (87.45%), Query Frame = 1 Query: 1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSNGKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKE 789 SSMASVCGGS ALMDAGVP+KKPVAG AMGM VG++NT +LSDIRGEE FMGDMDFKTAG+ DGITACQMDMKVQGISF EEALEQA GRLHIL MA++IS R +S YAPQFL+MEIDGSD GAVIGPGGKVIQTLQKETGTEI+IEE GKG ITISANDL AE+AKKRIKMIVGHLEEGATYKG VKS KDFGAFVEVAPGKDGLLHISE DH RV KV+ YL+LGDEIEV LLKVEHGGKLRLSRKALI ++ Sbjct: 440 SSMASVCGGSXALMDAGVPLKKPVAGXAMGMXVGEENTXVLSDIRGEEXFMGDMDFKTAGSVDGITACQMDMKVQGISFXIXEEALEQARVGRLHILEXMAESISMARPXLSXYAPQFLKMEIDGSDXGAVIGPGGKVIQTLQKETGTEIIIEEXDKGKGVITISANDLAXAEDAKKRIKMIVGHLEEGATYKGXVKSXKDFGAFVEVAPGKDGLLHISEXDHKRVXKVSXYLTLGDEIEVVLLKVEHGGKLRLSRKALIPRD 702
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A2A2GAV8_9BACT (Polyribonucleotide nucleotidyltransferase n=3 Tax=Aliifodinibius TaxID=1397107 RepID=A0A2A2GAV8_9BACT) HSP 1 Score: 403 bits (1036), Expect = 5.100e-134 Identity = 207/264 (78.41%), Postives = 237/264 (89.77%), Query Frame = 1 Query: 1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSN-GKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKE 789 SSMASVCGGSMALMDAGVP+KKPVAGIAMGMIVG+DN +LSDIRGEEDFMGDMDFKTAG+ DGITACQMDMKV GISFE +EEALEQA KGRLHIL +M +TIS PRE IS++APQF++MEI+ DIG+VIGPGGKVIQTLQKET TEI +EED GKG+ITISA+ L AEEAKKRI+ IVGHL+EGATY+G VK+IKD+GAFVE+ PGKDGLLH+SEI+H+ V+ V+D LS+GDE+EVKLLKVEHGGKLRLSRKALI K+ Sbjct: 439 SSMASVCGGSMALMDAGVPLKKPVAGIAMGMIVGEDNEVVLSDIRGEEDFMGDMDFKTAGSRDGITACQMDMKVSGISFEKLEEALEQARKGRLHILDKMEETISEPREQISEFAPQFVKMEIEADDIGSVIGPGGKVIQTLQKETNTEIWVEEDEERGKGKITISADKLSNAEEAKKRIQGIVGHLDEGATYQGTVKAIKDYGAFVEIVPGKDGLLHVSEINHSHVDNVSDVLSVGDELEVKLLKVEHGGKLRLSRKALIPKD 702
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A6M1SYT3_9BACT (Polyribonucleotide nucleotidyltransferase n=1 Tax=Balneolaceae bacterium YR4-1 TaxID=2709311 RepID=A0A6M1SYT3_9BACT) HSP 1 Score: 402 bits (1034), Expect = 1.050e-133 Identity = 207/263 (78.71%), Postives = 239/263 (90.87%), Query Frame = 1 Query: 1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSN-GKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEK 786 SSMASVCGGSMALMDAGVP+KKPVAGIAMGMIVG+++ +LSDIRGEEDFMGDMDFKTAG+S+G+TACQMDMKV+GISFE +EEAL+QAH+GRLHIL +MA+TIS P++NIS+YAPQF+ M IDG IGAVIGPGGKVIQTLQKET TEI +EED GKG+ITI+ANDL KAEEAKKRI+ IVG L+EGATY+GVVK+IK++GAFVE+ PGKDGLLH+SEI H V+ V+D LS+GDEIEVKLLKVEHGGKLRLSRKALI K Sbjct: 440 SSMASVCGGSMALMDAGVPLKKPVAGIAMGMIVGENDQVVLSDIRGEEDFMGDMDFKTAGSSEGLTACQMDMKVRGISFEVLEEALQQAHEGRLHILEKMAETISRPKDNISEYAPQFINMTIDGDQIGAVIGPGGKVIQTLQKETDTEIWVEEDDETGKGKITITANDLAKAEEAKKRIQGIVGQLDEGATYQGVVKAIKEYGAFVEIVPGKDGLLHVSEISHEHVKNVSDVLSVGDEIEVKLLKVEHGGKLRLSRKALIPK 702
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Match: A0A2D9FU35_9BACT (Polyribonucleotide nucleotidyltransferase n=9 Tax=Balneolaceae TaxID=1813606 RepID=A0A2D9FU35_9BACT) HSP 1 Score: 402 bits (1033), Expect = 1.360e-133 Identity = 206/265 (77.74%), Postives = 239/265 (90.19%), Query Frame = 1 Query: 1 SSMASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGDMDFKTAGTSDGITACQMDMKVQGISFETIEEALEQAHKGRLHILGEMAKTISSPRENISQYAPQFLRMEIDGSDIGAVIGPGGKVIQTLQKETGTEIMIEEDSN-GKGQITISANDLDKAEEAKKRIKMIVGHLEEGATYKGVVKSIKDFGAFVEVAPGKDGLLHISEIDHTRVEKVTDYLSLGDEIEVKLLKVEHGGKLRLSRKALIEKED 792 SSMASVCGGSMA+MDAGVP+KKPVAGIAMGMIVG++N+ +LSDIRGEEDFMGDMDFKTAGT+DGITACQMDMKVQGISFE +EEAL+QAH GRLHILG+MA+TIS+PREN+S++APQF+ M IDG IGAVIGPGGKVIQTLQKET TEI IEED GKG+ITISA+ LDKAE A++RIK I G LEEGA YKG VK+IKDFGAFVE+APG+DGLLHISE+D+ V+ V DY+S+GDEIEVKLLK+E G KLRLSRKAL++ ++ Sbjct: 438 SSMASVCGGSMAMMDAGVPLKKPVAGIAMGMIVGENNSVVLSDIRGEEDFMGDMDFKTAGTADGITACQMDMKVQGISFEVMEEALKQAHTGRLHILGKMAETISTPRENLSEFAPQFINMTIDGDMIGAVIGPGGKVIQTLQKETDTEIWIEEDDETGKGKITISADSLDKAEAAQERIKAITGQLEEGAIYKGTVKTIKDFGAFVEIAPGRDGLLHISEVDNKHVKDVNDYMSVGDEIEVKLLKIEPGNKLRLSRKALLDNDE 702 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10103.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10103.1.1 >prot_C-australica_Contig_10103.1.1 ID=prot_C-australica_Contig_10103.1.1|Name=mRNA_C-australica_Contig_10103.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=263bp MASVCGGSMALMDAGVPIKKPVAGIAMGMIVGKDNTAILSDIRGEEDFMGback to top mRNA from alignment at C-australica_Contig_10103:45..839- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10103.1.1 ID=mRNA_C-australica_Contig_10103.1.1|Name=mRNA_C-australica_Contig_10103.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=795bp|location=Sequence derived from alignment at C-australica_Contig_10103:45..839- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10103:45..839- >mRNA_C-australica_Contig_10103.1.1 ID=mRNA_C-australica_Contig_10103.1.1|Name=mRNA_C-australica_Contig_10103.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=789bp|location=Sequence derived from alignment at C-australica_Contig_10103:45..839- (Chrysoparadoxa australica CS_1217)back to top |