mRNA_C-australica_Contig_10100.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A2E8N176_9RICK (OmpA-like domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=A0A2E8N176_9RICK)

HSP 1 Score: 294 bits (752), Expect = 5.930e-92
Identity = 141/280 (50.36%), Postives = 201/280 (71.79%), Query Frame = 1

Query:    1 GGLGARDIWMTTFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840
            GG G RD+W++T   K WS P NLGS INT++D+ TPFIHVNG++LFFSS G  GLGG D+++S +E++ WS P NLG PINS NDE+ +FI A+G   Y++ E         S I++F I  D+L++N +SYVTGRV++++T  PL A F M +L+    +Y+V SD V+G+YFLVLT+G++YGVFI K  Y+FEDL+F A  +S+L PDTIDI L PI+ G ++ L N+YF+ + + L+NKS  EL+++  ++ +NP L+  IEG+TDN G E YN++
Sbjct:  307 GGFGKRDLWVSTRTEKGWSSPINLGSTINTSRDETTPFIHVNGKALFFSSNGHYGLGGLDLFVSEKEDD-WSTPQNLGVPINSKNDEISLFINANGTHGYYAMENESGTRSSKSRIVKFKIPYDSLLKNKASYVTGRVIDKDTGKPLGASFKMRNLSDFKDVYEVDSDPVSGKYFLVLTEGNQYGVFIQKENYMFEDLSFVAEENSVLNPDTIDILLSPIRPGETVSLHNIYFQIDSYELENKSHLELNELIAFIKSNPKLKFLIEGHTDNTGTELYNLD 585

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BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A654E443_9BACT (OmpA-like domain-containing protein n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654E443_9BACT)

HSP 1 Score: 291 bits (746), Expect = 3.080e-91
Identity = 144/279 (51.61%), Postives = 192/279 (68.82%), Query Frame = 1

Query:    1 GGLGARDIWMTTFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNI 837
            GG+G RDIW +      WS P NLG  INT  D+ TPFIHVN   LFFS++G PGLGG+D++ S +    WS P NLGYPIN+ NDE+ +FI A G   Y++ E  + G   ++ I++F +  D+LV+  +SYVTGRV +  T  PL A   M +LN     Y V+SDS++GRYFLVLT+G+EYGVFI K  YLFEDL F+A SS+ L+PDT+DI L PI+ G S+ LEN+YFEFNE  L+ KS SEL++I  Y+  N +L  +I+G+TD +G E+YN+
Sbjct:  291 GGVGKRDIWSSQLTETGWSEPVNLGKPINTPFDETTPFIHVNNDLLFFSTQGYPGLGGFDLFFSEKTNGQWSLPTNLGYPINTVNDELSLFINASGTFGYYAIEKTESGVTSTTNIVKFKVPFDSLVKKKASYVTGRVQDGITGKPLGARMRMSNLNDTTDTYWVNSDSISGRYFLVLTEGNEYGVFIRKKDYLFEDLKFEAQSSTALRPDTLDILLHPIEAGASLTLENIYFEFNEHLLNPKSRSELNEIVEYLKLNKSLTFEIQGHTDTVGTESYNL 569

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BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A3D9KXK4_MARFU (WD40 repeat protein n=2 Tax=Marinoscillum furvescens TaxID=1026 RepID=A0A3D9KXK4_MARFU)

HSP 1 Score: 280 bits (717), Expect = 9.480e-87
Identity = 135/278 (48.56%), Postives = 187/278 (67.27%), Query Frame = 1

Query:    1 GGLGARDIWMTTFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYN 834
            GG+G RDIW +   G +W   +NLG  +NT  D+ TPFIH NG+SL FSS+G  G+GG+D+ LS ++   WS PVNLG+P+N+ +DE+ +F+ A G  AYF+KE      +  S ++R+ +  DTLV + S YVTG+V++ +T AP+ AD  M +L     IY V SDSVNG+YFLVLTQG  YGVF+ K GYLFED  F+ +    L PDT++I L PI  G  + LEN+YF  +++ LD +S +EL +I  Y+  NP +E +I+G+TDN G EAYN
Sbjct:  307 GGIGKRDIWTSRKVGDEWQEAQNLGKPVNTVYDETTPFIHANGRSLIFSSEGHVGMGGFDLLLSQKQSGIWSTPVNLGFPVNTHHDEISMFLNASGSMAYFAKETISKQGVKRSLLVRYPLV-DTLVADKSKYVTGKVMDAKTKAPIGADLRMINLMDSSDIYHVRSDSVNGKYFLVLTQGQTYGVFVKKKGYLFEDFRFETSEGQALTPDTLNILLSPIATGDQLTLENIYFGVDDYRLDPRSRAELLEIVAYLNENPAIEFEIQGHTDNQGGEAYN 583

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BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A5E8A3T8_9BACT (OmpA/MotB domain-containing protein n=1 Tax=Imperialibacter sp. EC-SDR9 TaxID=2038371 RepID=A0A5E8A3T8_9BACT)

HSP 1 Score: 277 bits (708), Expect = 1.920e-85
Identity = 128/281 (45.55%), Postives = 193/281 (68.68%), Query Frame = 1

Query:    1 GGLGARDIWMTTFDGKD-WSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840
            GG G RDIW++T   +D W  P NLG  INT  DD++PFIHVNGQSL+FSS G  GLG YD++LS +    WS+P NLGYPIN+ +D+V + IT+DG  AY+S E+ +      S +  F + E+  V+N S+++TGRV++ ET  PL A   M D+N   + Y V+SD V+G+YF+VLT+G EY +++++ GYLFE+LTF        +P+ +DIYL PIK G + +L+N++F+ +++ L  KS +ELD++  ++ +N  + ++IEG+TDN G  ++N+E
Sbjct:  307 GGQGKRDIWVSTLSARDNWMEPVNLGPVINTEGDDLSPFIHVNGQSLYFSSSGHKGLGKYDLFLSEKNGLEWSQPKNLGYPINTKDDQVSLVITSDGTKAYYSHEVIENNRDFQSSLYTFDVPEEIRVQNKSNFLTGRVMDIETKKPLGASIEMFDINDASLNYKVTSDKVDGKYFVVLTEGKEYSIYVTRKGYLFENLTFNYLEKKSREPEVLDIYLTPIKAGATSVLKNIFFDVDQYVLKEKSKTELDEVIKFLKDNEQIRMEIEGHTDNTGSTSHNLE 587

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BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: UPI0003481570 (OmpA family protein n=1 Tax=Nafulsella turpanensis TaxID=1265690 RepID=UPI0003481570)

HSP 1 Score: 275 bits (702), Expect = 1.560e-84
Identity = 127/279 (45.52%), Postives = 194/279 (69.53%), Query Frame = 1

Query:    1 GGLGARDIWMTTFDGK-DWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYN 834
            GG+G  DI+ +  D   +W + ENLG  +NT+ D+++PFIH NGQ+L+F S G+ G+GGYD++++ +EEEGW EP NLGYPIN+  D+V +F+TADG+  Y++ E    G    S + RF I E   VRN S+YV+G+V + ET  PL A   + D+  E ++  VSSDSVNG Y++VLT+G EY ++++K GYLF+ L F   +++ L+P  ID+YL+PI+ GVS  L N++FE +E+ L  KS +EL+++  ++  NP + ++I G+TDN+G+ +YN
Sbjct:  309 GGVGQNDIYRSMQDETGNWEVVENLGKTVNTSFDEVSPFIHANGQTLYFGSNGRRGMGGYDLFVTEQEEEGWQEPRNLGYPINNHEDQVSLFVTADGEEGYYAYEEKGGGANDRSLLYRFKIPEAVQVRNRSNYVSGKVYDAETKKPLGAAVTLFDIVDEQVVNKVSSDSVNGTYYIVLTEGSEYALYVNKPGYLFKSLAFNYGTNNTLEPIAIDVYLEPIRAGVSTTLNNIFFETDEYQLQPKSETELERVVQFLKENPKVAIEIAGHTDNVGNASYN 587

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BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A7Y4XRG4_9BACT (OmpA family protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4XRG4_9BACT)

HSP 1 Score: 264 bits (674), Expect = 1.920e-80
Identity = 124/280 (44.29%), Postives = 190/280 (67.86%), Query Frame = 1

Query:    4 GLGARDIWMT-TFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840
            GLG +DI+++   D   WS  ENLG +INT  D+I+PFIHVNG++LFF+S G PG GG+D+Y S +E   WSEPVN GYP+N+  D+  +FIT DGQ  ++S E  D     SS+I    + E+  +R  S+YV G V +++TN PL A   + ++++  ++  V SDSV G Y +VLTQG +YG+++S+ GYLF+ L F   +   L P ++D+YL+P++ G + +L N++F+ N++ L +KS++ELD+I  ++  NPT+ V+I G+TDN G  AYN++
Sbjct:  305 GLGKKDIYVSYKLDENRWSKAENLGDKINTPYDEISPFIHVNGRTLFFASNGMPGFGGHDLYRSEKENGQWSEPVNFGYPVNTHEDQFSLFITTDGQHGFYSHE--DNEKANSSKIFEINVPEELQLRYKSNYVKGIVRDKKTNKPLNARLELLNMDKNELVSFVRSDSVTGEYLMVLTQGADYGLYVSRPGYLFQSLNFNYQAEGNLIPVSVDVYLEPVEMGATAVLNNLFFDLNKYELKDKSITELDKIIRFLNENPTIRVEISGHTDNAGTPAYNLQ 582

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BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: UPI001F09FA12 (OmpA family protein n=1 Tax=Tunicatimonas sp. TK19036 TaxID=2867963 RepID=UPI001F09FA12)

HSP 1 Score: 264 bits (674), Expect = 3.100e-80
Identity = 127/282 (45.04%), Postives = 187/282 (66.31%), Query Frame = 1

Query:    1 GGLGARDIWMTTFDGK-DWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSS---LLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYN 834
            GG G RDI++T    K +WS  +N+G  INTA+D+++PFIHVNGQ+L+F+S G+PG GG+D+Y++ R +  WS P NLGYPIN+F D+  +FITADG+ AY+S E    G  V SEI  F I ++  V+  S++V G+V N  T  PL+A   + DL  +  I  V SD V+G Y +VLT+G EY ++++K  +LF+ LTF     S   + QP  IDIYL PI++G   +L N++F+ +++ + NKS  ELD+I  ++  NP + + I G+TDN+G  +YN
Sbjct:  322 GGHGKRDIYVTERTVKGEWSKAKNVGKEINTARDEVSPFIHVNGQTLYFASNGRPGFGGFDLYVTERSKNRWSAPENLGYPINTFEDQASLFITADGRDAYYSNEEQRQGEYVRSEIFTFSIPQEIRVQYRSNFVFGKVYNAATKEPLEASVELIDLQNQQSISMVDSDPVSGEYLMVLTEGSEYALYVNKDDFLFKSLTFNYVEPSEAYIQQPIEIDIYLDPIQKGQETVLNNIFFDTDKYEIKNKSKPELDKIANFLQENPDIAISINGHTDNVGASSYN 603

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BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: L8JMH7_9BACT (Outer membrane protein n=1 Tax=Fulvivirga imtechensis AK7 TaxID=1237149 RepID=L8JMH7_9BACT)

HSP 1 Score: 263 bits (672), Expect = 3.880e-80
Identity = 128/284 (45.07%), Postives = 191/284 (67.25%), Query Frame = 1

Query:    1 GGLGARDIWMTTFD-GKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLN---REGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840
            GG+G RDI+++  D    W+ PENLG  +NT  D+++PFIH N  +L+F+S G  G GG+D++ S RE + WS P NLGYPIN+  D+V +FIT+DG+  Y+S E+ +        I  F + E   V+ ++SYV+G+V + ET  PL+AD  + DL    REG+   VSSDSV G Y +VLT+G EY ++++K GYLFE L+F+   ++ L+P  IDIYLKPIK G   +L N++FEF+ F L  KS +EL+++  ++  N +++++I G+TDN G EAYN++
Sbjct:  304 GGIGGRDIYVSRLDENNQWTTPENLGRGVNTQGDEVSPFIHPNNVTLYFASNGLTGFGGFDIFYSERENDEWSTPKNLGYPINTSEDQVSLFITSDGKKGYYSHEVNN-NPKQKGRIYEFNVPESVRVKYSTSYVSGKVFHAETKEPLKADIELFDLKEAQREGL---VSSDSVTGSYLMVLTEGSEYALYVNKEGYLFESLSFEYELNADLEPVNIDIYLKPIKSGARAVLNNIFFEFDSFELQQKSKTELNKLVRFLKQNTSVKMEIGGHTDNTGSEAYNMD 583

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BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A355BQX3_9BACT (OmpA-like domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A355BQX3_9BACT)

HSP 1 Score: 256 bits (655), Expect = 1.410e-77
Identity = 125/281 (44.48%), Postives = 184/281 (65.48%), Query Frame = 1

Query:    1 GGLGARDIWMT-TFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840
            GGLG +DI+++   +   W+  ENLG +INT  ++I+PFIHVNG++LFF+S G+PG GG+D+Y S RE   WSEP N G P+N++ D+  ++ITADG+  ++S E  D   I SS+I+   I ED  +R  S+YV G VL+++T  PL+A   + ++N+  +   V SDSV G Y +VLTQG +Y ++ +  GYLF+ L F   S     P  +DI L P + G S +L N++FEFN+F +  KS +ELD++  +M  NP L V+I G+TDN G  AYN++
Sbjct:  310 GGLGNKDIYVSYKLNNNQWTRAENLGDKINTPYEEISPFIHVNGRTLFFASNGRPGFGGFDLYRSERENSVWSEPTNFGSPVNTYEDQFSLYITADGKRGFYSHE--DNDKINSSKIVEITIPEDLRLRYVSNYVKGVVLDKKTRKPLKAKVELFNINQNVLTSAVYSDSVTGEYLMVLTQGADYALYANSPGYLFQSLNFNYESEIHHDPVAMDILLDPAELGASSVLNNIFFEFNKFDIQEKSTTELDKVVRFMNENPGLRVEISGHTDNAGTAAYNLQ 588

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BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: UPI0012BBC6F6 (OmpA family protein n=2 Tax=Fulvivirga TaxID=396811 RepID=UPI0012BBC6F6)

HSP 1 Score: 254 bits (648), Expect = 1.310e-76
Identity = 120/284 (42.25%), Postives = 188/284 (66.20%), Query Frame = 1

Query:    1 GGLGARDIWMTTFDGKD-WSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLN---REGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840
            GG+G RDIW++  D K+ WS P NLG  INT  D+++PFIH N  +L+F+S G  G GG+D++ + R+++ WSEP N+GYPIN+  D+V +FIT+DG+  Y+S E+ +       ++  F +  +  V+  +SYVTG V +  T  PL+A   + DL    REG +Y   SDSV+G Y +VLT+G +Y ++++K GYLFE L+F+   +  LQP  +DIYLKPI EG   +L N++F+ + ++L +KS +EL+++ +++  NP   ++I G+TDN G   YN++
Sbjct:  302 GGVGGRDIWVSYLDDKEQWSNPSNLGRSINTPHDEVSPFIHPNNVTLYFASNGLTGFGGFDIFYTERDDKNWSEPKNIGYPINTSADQVSLFITSDGEKGYYSHEVTNDPN-QKGKLYEFNVPANAKVKYRTSYVTGHVFDAVTKKPLKAGIELYDLKNEAREGFVY---SDSVSGEYLMVLTEGSDYALYVNKPGYLFESLSFEYQLNEDLQPVKLDIYLKPISEGAKAVLNNIFFDVDSYALKDKSKTELNKLISFLNANPNARIEIGGHTDNTGSGEYNLD 581

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

ZOOM

x 1

POSITION

0


Match Name	E-value	Identity	Description
A0A2E8N176_9RICK	5.930e-92	50.36	OmpA-like domain-containing protein n=3 Tax=Bacter...	[more]
A0A654E443_9BACT	3.080e-91	51.61	OmpA-like domain-containing protein n=1 Tax=Marino...	[more]
A0A3D9KXK4_MARFU	9.480e-87	48.56	WD40 repeat protein n=2 Tax=Marinoscillum furvesce...	[more]
A0A5E8A3T8_9BACT	1.920e-85	45.55	OmpA/MotB domain-containing protein n=1 Tax=Imperi...	[more]
UPI0003481570	1.560e-84	45.52	OmpA family protein n=1 Tax=Nafulsella turpanensis...	[more]
A0A7Y4XRG4_9BACT	1.920e-80	44.29	OmpA family protein n=1 Tax=Cyclobacteriaceae bact...	[more]
UPI001F09FA12	3.100e-80	45.04	OmpA family protein n=1 Tax=Tunicatimonas sp. TK19...	[more]
L8JMH7_9BACT	3.880e-80	45.07	Outer membrane protein n=1 Tax=Fulvivirga imtechen...	[more]
A0A355BQX3_9BACT	1.410e-77	44.48	OmpA-like domain-containing protein n=1 Tax=Cytoph...	[more]
UPI0012BBC6F6	1.310e-76	42.25	OmpA family protein n=2 Tax=Fulvivirga TaxID=39681...	[more]

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Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-australica_Contig_10100:1..840-
coding sequence from alignment at C-australica_Contig_10100:1..840-

protein sequence of mRNA_C-australica_Contig_10100.1.1

>prot_C-australica_Contig_10100.1.1 ID=prot_C-australica_Contig_10100.1.1|Name=mRNA_C-australica_Contig_10100.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=271bp
MTTFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGY
DMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMG
TIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNRE
GIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQ
PDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNP
TLEVQIEGYTDNIGDEAYNIE

mRNA from alignment at C-australica_Contig_10100:1..840-

Legend: UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-australica_Contig_10100.1.1 ID=mRNA_C-australica_Contig_10100.1.1|Name=mRNA_C-australica_Contig_10100.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=840bp|location=Sequence derived from alignment at C-australica_Contig_10100:1..840- (Chrysoparadoxa australica CS_1217)
GGTGGTTTGGGAGCCAGAGACATTTGGATGACTACTTTTGATGGAAAGGA
TTGGAGCATTCCTGAGAACCTCGGTTCCCGAATAAACACAGCACAGGATG
ATATTACCCCTTTTATCCATGTGAACGGTCAATCTTTGTTTTTTTCCTCT
AAAGGAAAACCAGGTTTAGGTGGTTATGATATGTATTTATCAAATCGTGA
AGAGGAGGGGTGGTCAGAACCGGTAAACCTGGGTTATCCAATTAACTCAT
TTAATGATGAGGTGGGGATATTTATTACAGCAGATGGACAATCGGCATAT
TTCAGTAAGGAAATTGCTGACATGGGTACCATTGTGAGCAGTGAGATCAT
GAGATTTTTGATCAAGGAAGATACGTTGGTAAGAAATACATCCAGTTATG
TGACTGGAAGAGTACTTAATGAGGAAACAAATGCCCCCCTACAAGCAGAT
TTTCATATGGAAGATCTAAATCGGGAAGGTATTATTTATGATGTAAGCTC
CGACTCAGTCAATGGAAGGTACTTTCTTGTTTTGACTCAAGGGCATGAAT
ACGGAGTATTTATTAGTAAAACCGGATATTTATTTGAGGACCTTACTTTT
CAGGCCACGTCCAGCTCGTTGTTACAACCTGATACCATTGATATATATCT
AAAACCAATCAAGGAAGGTGTTTCAATGATCCTGGAGAATGTATATTTTG
AGTTTAATGAGTTCAGCCTAGATAATAAATCTTTGTCTGAGTTAGATCAG
ATATATACTTATATGGTCAATAACCCAACACTAGAAGTACAGATAGAGGG
GTATACAGATAATATCGGGGATGAAGCATACAACATTGAG

Coding sequence (CDS) from alignment at C-australica_Contig_10100:1..840-

>mRNA_C-australica_Contig_10100.1.1 ID=mRNA_C-australica_Contig_10100.1.1|Name=mRNA_C-australica_Contig_10100.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=813bp|location=Sequence derived from alignment at C-australica_Contig_10100:1..840- (Chrysoparadoxa australica CS_1217)
ATGACTACTTTTGATGGAAAGGATTGGAGCATTCCTGAGAACCTCGGTTC
CCGAATAAACACAGCACAGGATGATATTACCCCTTTTATCCATGTGAACG
GTCAATCTTTGTTTTTTTCCTCTAAAGGAAAACCAGGTTTAGGTGGTTAT
GATATGTATTTATCAAATCGTGAAGAGGAGGGGTGGTCAGAACCGGTAAA
CCTGGGTTATCCAATTAACTCATTTAATGATGAGGTGGGGATATTTATTA
CAGCAGATGGACAATCGGCATATTTCAGTAAGGAAATTGCTGACATGGGT
ACCATTGTGAGCAGTGAGATCATGAGATTTTTGATCAAGGAAGATACGTT
GGTAAGAAATACATCCAGTTATGTGACTGGAAGAGTACTTAATGAGGAAA
CAAATGCCCCCCTACAAGCAGATTTTCATATGGAAGATCTAAATCGGGAA
GGTATTATTTATGATGTAAGCTCCGACTCAGTCAATGGAAGGTACTTTCT
TGTTTTGACTCAAGGGCATGAATACGGAGTATTTATTAGTAAAACCGGAT
ATTTATTTGAGGACCTTACTTTTCAGGCCACGTCCAGCTCGTTGTTACAA
CCTGATACCATTGATATATATCTAAAACCAATCAAGGAAGGTGTTTCAAT
GATCCTGGAGAATGTATATTTTGAGTTTAATGAGTTCAGCCTAGATAATA
AATCTTTGTCTGAGTTAGATCAGATATATACTTATATGGTCAATAACCCA
ACACTAGAAGTACAGATAGAGGGGTATACAGATAATATCGGGGATGAAGC
ATACAACATTGAG