mRNA_C-australica_Contig_10100.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A2E8N176_9RICK (OmpA-like domain-containing protein n=3 Tax=Bacteria TaxID=2 RepID=A0A2E8N176_9RICK) HSP 1 Score: 294 bits (752), Expect = 5.930e-92 Identity = 141/280 (50.36%), Postives = 201/280 (71.79%), Query Frame = 1 Query: 1 GGLGARDIWMTTFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840 GG G RD+W++T K WS P NLGS INT++D+ TPFIHVNG++LFFSS G GLGG D+++S +E++ WS P NLG PINS NDE+ +FI A+G Y++ E S I++F I D+L++N +SYVTGRV++++T PL A F M +L+ +Y+V SD V+G+YFLVLT+G++YGVFI K Y+FEDL+F A +S+L PDTIDI L PI+ G ++ L N+YF+ + + L+NKS EL+++ ++ +NP L+ IEG+TDN G E YN++ Sbjct: 307 GGFGKRDLWVSTRTEKGWSSPINLGSTINTSRDETTPFIHVNGKALFFSSNGHYGLGGLDLFVSEKEDD-WSTPQNLGVPINSKNDEISLFINANGTHGYYAMENESGTRSSKSRIVKFKIPYDSLLKNKASYVTGRVIDKDTGKPLGASFKMRNLSDFKDVYEVDSDPVSGKYFLVLTEGNQYGVFIQKENYMFEDLSFVAEENSVLNPDTIDILLSPIRPGETVSLHNIYFQIDSYELENKSHLELNELIAFIKSNPKLKFLIEGHTDNTGTELYNLD 585
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A654E443_9BACT (OmpA-like domain-containing protein n=1 Tax=Marinoscillum sp. 108 TaxID=2653151 RepID=A0A654E443_9BACT) HSP 1 Score: 291 bits (746), Expect = 3.080e-91 Identity = 144/279 (51.61%), Postives = 192/279 (68.82%), Query Frame = 1 Query: 1 GGLGARDIWMTTFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNI 837 GG+G RDIW + WS P NLG INT D+ TPFIHVN LFFS++G PGLGG+D++ S + WS P NLGYPIN+ NDE+ +FI A G Y++ E + G ++ I++F + D+LV+ +SYVTGRV + T PL A M +LN Y V+SDS++GRYFLVLT+G+EYGVFI K YLFEDL F+A SS+ L+PDT+DI L PI+ G S+ LEN+YFEFNE L+ KS SEL++I Y+ N +L +I+G+TD +G E+YN+ Sbjct: 291 GGVGKRDIWSSQLTETGWSEPVNLGKPINTPFDETTPFIHVNNDLLFFSTQGYPGLGGFDLFFSEKTNGQWSLPTNLGYPINTVNDELSLFINASGTFGYYAIEKTESGVTSTTNIVKFKVPFDSLVKKKASYVTGRVQDGITGKPLGARMRMSNLNDTTDTYWVNSDSISGRYFLVLTEGNEYGVFIRKKDYLFEDLKFEAQSSTALRPDTLDILLHPIEAGASLTLENIYFEFNEHLLNPKSRSELNEIVEYLKLNKSLTFEIQGHTDTVGTESYNL 569
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A3D9KXK4_MARFU (WD40 repeat protein n=2 Tax=Marinoscillum furvescens TaxID=1026 RepID=A0A3D9KXK4_MARFU) HSP 1 Score: 280 bits (717), Expect = 9.480e-87 Identity = 135/278 (48.56%), Postives = 187/278 (67.27%), Query Frame = 1 Query: 1 GGLGARDIWMTTFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYN 834 GG+G RDIW + G +W +NLG +NT D+ TPFIH NG+SL FSS+G G+GG+D+ LS ++ WS PVNLG+P+N+ +DE+ +F+ A G AYF+KE + S ++R+ + DTLV + S YVTG+V++ +T AP+ AD M +L IY V SDSVNG+YFLVLTQG YGVF+ K GYLFED F+ + L PDT++I L PI G + LEN+YF +++ LD +S +EL +I Y+ NP +E +I+G+TDN G EAYN Sbjct: 307 GGIGKRDIWTSRKVGDEWQEAQNLGKPVNTVYDETTPFIHANGRSLIFSSEGHVGMGGFDLLLSQKQSGIWSTPVNLGFPVNTHHDEISMFLNASGSMAYFAKETISKQGVKRSLLVRYPLV-DTLVADKSKYVTGKVMDAKTKAPIGADLRMINLMDSSDIYHVRSDSVNGKYFLVLTQGQTYGVFVKKKGYLFEDFRFETSEGQALTPDTLNILLSPIATGDQLTLENIYFGVDDYRLDPRSRAELLEIVAYLNENPAIEFEIQGHTDNQGGEAYN 583
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A5E8A3T8_9BACT (OmpA/MotB domain-containing protein n=1 Tax=Imperialibacter sp. EC-SDR9 TaxID=2038371 RepID=A0A5E8A3T8_9BACT) HSP 1 Score: 277 bits (708), Expect = 1.920e-85 Identity = 128/281 (45.55%), Postives = 193/281 (68.68%), Query Frame = 1 Query: 1 GGLGARDIWMTTFDGKD-WSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840 GG G RDIW++T +D W P NLG INT DD++PFIHVNGQSL+FSS G GLG YD++LS + WS+P NLGYPIN+ +D+V + IT+DG AY+S E+ + S + F + E+ V+N S+++TGRV++ ET PL A M D+N + Y V+SD V+G+YF+VLT+G EY +++++ GYLFE+LTF +P+ +DIYL PIK G + +L+N++F+ +++ L KS +ELD++ ++ +N + ++IEG+TDN G ++N+E Sbjct: 307 GGQGKRDIWVSTLSARDNWMEPVNLGPVINTEGDDLSPFIHVNGQSLYFSSSGHKGLGKYDLFLSEKNGLEWSQPKNLGYPINTKDDQVSLVITSDGTKAYYSHEVIENNRDFQSSLYTFDVPEEIRVQNKSNFLTGRVMDIETKKPLGASIEMFDINDASLNYKVTSDKVDGKYFVVLTEGKEYSIYVTRKGYLFENLTFNYLEKKSREPEVLDIYLTPIKAGATSVLKNIFFDVDQYVLKEKSKTELDEVIKFLKDNEQIRMEIEGHTDNTGSTSHNLE 587
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: UPI0003481570 (OmpA family protein n=1 Tax=Nafulsella turpanensis TaxID=1265690 RepID=UPI0003481570) HSP 1 Score: 275 bits (702), Expect = 1.560e-84 Identity = 127/279 (45.52%), Postives = 194/279 (69.53%), Query Frame = 1 Query: 1 GGLGARDIWMTTFDGK-DWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYN 834 GG+G DI+ + D +W + ENLG +NT+ D+++PFIH NGQ+L+F S G+ G+GGYD++++ +EEEGW EP NLGYPIN+ D+V +F+TADG+ Y++ E G S + RF I E VRN S+YV+G+V + ET PL A + D+ E ++ VSSDSVNG Y++VLT+G EY ++++K GYLF+ L F +++ L+P ID+YL+PI+ GVS L N++FE +E+ L KS +EL+++ ++ NP + ++I G+TDN+G+ +YN Sbjct: 309 GGVGQNDIYRSMQDETGNWEVVENLGKTVNTSFDEVSPFIHANGQTLYFGSNGRRGMGGYDLFVTEQEEEGWQEPRNLGYPINNHEDQVSLFVTADGEEGYYAYEEKGGGANDRSLLYRFKIPEAVQVRNRSNYVSGKVYDAETKKPLGAAVTLFDIVDEQVVNKVSSDSVNGTYYIVLTEGSEYALYVNKPGYLFKSLAFNYGTNNTLEPIAIDVYLEPIRAGVSTTLNNIFFETDEYQLQPKSETELERVVQFLKENPKVAIEIAGHTDNVGNASYN 587
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A7Y4XRG4_9BACT (OmpA family protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4XRG4_9BACT) HSP 1 Score: 264 bits (674), Expect = 1.920e-80 Identity = 124/280 (44.29%), Postives = 190/280 (67.86%), Query Frame = 1 Query: 4 GLGARDIWMT-TFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840 GLG +DI+++ D WS ENLG +INT D+I+PFIHVNG++LFF+S G PG GG+D+Y S +E WSEPVN GYP+N+ D+ +FIT DGQ ++S E D SS+I + E+ +R S+YV G V +++TN PL A + ++++ ++ V SDSV G Y +VLTQG +YG+++S+ GYLF+ L F + L P ++D+YL+P++ G + +L N++F+ N++ L +KS++ELD+I ++ NPT+ V+I G+TDN G AYN++ Sbjct: 305 GLGKKDIYVSYKLDENRWSKAENLGDKINTPYDEISPFIHVNGRTLFFASNGMPGFGGHDLYRSEKENGQWSEPVNFGYPVNTHEDQFSLFITTDGQHGFYSHE--DNEKANSSKIFEINVPEELQLRYKSNYVKGIVRDKKTNKPLNARLELLNMDKNELVSFVRSDSVTGEYLMVLTQGADYGLYVSRPGYLFQSLNFNYQAEGNLIPVSVDVYLEPVEMGATAVLNNLFFDLNKYELKDKSITELDKIIRFLNENPTIRVEISGHTDNAGTPAYNLQ 582
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: UPI001F09FA12 (OmpA family protein n=1 Tax=Tunicatimonas sp. TK19036 TaxID=2867963 RepID=UPI001F09FA12) HSP 1 Score: 264 bits (674), Expect = 3.100e-80 Identity = 127/282 (45.04%), Postives = 187/282 (66.31%), Query Frame = 1 Query: 1 GGLGARDIWMTTFDGK-DWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSS---LLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYN 834 GG G RDI++T K +WS +N+G INTA+D+++PFIHVNGQ+L+F+S G+PG GG+D+Y++ R + WS P NLGYPIN+F D+ +FITADG+ AY+S E G V SEI F I ++ V+ S++V G+V N T PL+A + DL + I V SD V+G Y +VLT+G EY ++++K +LF+ LTF S + QP IDIYL PI++G +L N++F+ +++ + NKS ELD+I ++ NP + + I G+TDN+G +YN Sbjct: 322 GGHGKRDIYVTERTVKGEWSKAKNVGKEINTARDEVSPFIHVNGQTLYFASNGRPGFGGFDLYVTERSKNRWSAPENLGYPINTFEDQASLFITADGRDAYYSNEEQRQGEYVRSEIFTFSIPQEIRVQYRSNFVFGKVYNAATKEPLEASVELIDLQNQQSISMVDSDPVSGEYLMVLTEGSEYALYVNKDDFLFKSLTFNYVEPSEAYIQQPIEIDIYLDPIQKGQETVLNNIFFDTDKYEIKNKSKPELDKIANFLQENPDIAISINGHTDNVGASSYN 603
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: L8JMH7_9BACT (Outer membrane protein n=1 Tax=Fulvivirga imtechensis AK7 TaxID=1237149 RepID=L8JMH7_9BACT) HSP 1 Score: 263 bits (672), Expect = 3.880e-80 Identity = 128/284 (45.07%), Postives = 191/284 (67.25%), Query Frame = 1 Query: 1 GGLGARDIWMTTFD-GKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLN---REGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840 GG+G RDI+++ D W+ PENLG +NT D+++PFIH N +L+F+S G G GG+D++ S RE + WS P NLGYPIN+ D+V +FIT+DG+ Y+S E+ + I F + E V+ ++SYV+G+V + ET PL+AD + DL REG+ VSSDSV G Y +VLT+G EY ++++K GYLFE L+F+ ++ L+P IDIYLKPIK G +L N++FEF+ F L KS +EL+++ ++ N +++++I G+TDN G EAYN++ Sbjct: 304 GGIGGRDIYVSRLDENNQWTTPENLGRGVNTQGDEVSPFIHPNNVTLYFASNGLTGFGGFDIFYSERENDEWSTPKNLGYPINTSEDQVSLFITSDGKKGYYSHEVNN-NPKQKGRIYEFNVPESVRVKYSTSYVSGKVFHAETKEPLKADIELFDLKEAQREGL---VSSDSVTGSYLMVLTEGSEYALYVNKEGYLFESLSFEYELNADLEPVNIDIYLKPIKSGARAVLNNIFFEFDSFELQQKSKTELNKLVRFLKQNTSVKMEIGGHTDNTGSEAYNMD 583
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: A0A355BQX3_9BACT (OmpA-like domain-containing protein n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A355BQX3_9BACT) HSP 1 Score: 256 bits (655), Expect = 1.410e-77 Identity = 125/281 (44.48%), Postives = 184/281 (65.48%), Query Frame = 1 Query: 1 GGLGARDIWMT-TFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLNREGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840 GGLG +DI+++ + W+ ENLG +INT ++I+PFIHVNG++LFF+S G+PG GG+D+Y S RE WSEP N G P+N++ D+ ++ITADG+ ++S E D I SS+I+ I ED +R S+YV G VL+++T PL+A + ++N+ + V SDSV G Y +VLTQG +Y ++ + GYLF+ L F S P +DI L P + G S +L N++FEFN+F + KS +ELD++ +M NP L V+I G+TDN G AYN++ Sbjct: 310 GGLGNKDIYVSYKLNNNQWTRAENLGDKINTPYEEISPFIHVNGRTLFFASNGRPGFGGFDLYRSERENSVWSEPTNFGSPVNTYEDQFSLYITADGKRGFYSHE--DNDKINSSKIVEITIPEDLRLRYVSNYVKGVVLDKKTRKPLKAKVELFNINQNVLTSAVYSDSVTGEYLMVLTQGADYALYANSPGYLFQSLNFNYESEIHHDPVAMDILLDPAELGASSVLNNIFFEFNKFDIQEKSTTELDKVVRFMNENPGLRVEISGHTDNAGTAAYNLQ 588
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Match: UPI0012BBC6F6 (OmpA family protein n=2 Tax=Fulvivirga TaxID=396811 RepID=UPI0012BBC6F6) HSP 1 Score: 254 bits (648), Expect = 1.310e-76 Identity = 120/284 (42.25%), Postives = 188/284 (66.20%), Query Frame = 1 Query: 1 GGLGARDIWMTTFDGKD-WSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYDMYLSNREEEGWSEPVNLGYPINSFNDEVGIFITADGQSAYFSKEIADMGTIVSSEIMRFLIKEDTLVRNTSSYVTGRVLNEETNAPLQADFHMEDLN---REGIIYDVSSDSVNGRYFLVLTQGHEYGVFISKTGYLFEDLTFQATSSSLLQPDTIDIYLKPIKEGVSMILENVYFEFNEFSLDNKSLSELDQIYTYMVNNPTLEVQIEGYTDNIGDEAYNIE 840 GG+G RDIW++ D K+ WS P NLG INT D+++PFIH N +L+F+S G G GG+D++ + R+++ WSEP N+GYPIN+ D+V +FIT+DG+ Y+S E+ + ++ F + + V+ +SYVTG V + T PL+A + DL REG +Y SDSV+G Y +VLT+G +Y ++++K GYLFE L+F+ + LQP +DIYLKPI EG +L N++F+ + ++L +KS +EL+++ +++ NP ++I G+TDN G YN++ Sbjct: 302 GGVGGRDIWVSYLDDKEQWSNPSNLGRSINTPHDEVSPFIHPNNVTLYFASNGLTGFGGFDIFYTERDDKNWSEPKNIGYPINTSADQVSLFITSDGEKGYYSHEVTNDPN-QKGKLYEFNVPANAKVKYRTSYVTGHVFDAVTKKPLKAGIELYDLKNEAREGFVY---SDSVSGEYLMVLTEGSDYALYVNKPGYLFESLSFEYQLNEDLQPVKLDIYLKPISEGAKAVLNNIFFDVDSYALKDKSKTELNKLISFLNANPNARIEIGGHTDNTGSGEYNLD 581 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10100.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10100.1.1 >prot_C-australica_Contig_10100.1.1 ID=prot_C-australica_Contig_10100.1.1|Name=mRNA_C-australica_Contig_10100.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=271bp MTTFDGKDWSIPENLGSRINTAQDDITPFIHVNGQSLFFSSKGKPGLGGYback to top mRNA from alignment at C-australica_Contig_10100:1..840- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10100.1.1 ID=mRNA_C-australica_Contig_10100.1.1|Name=mRNA_C-australica_Contig_10100.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=840bp|location=Sequence derived from alignment at C-australica_Contig_10100:1..840- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10100:1..840- >mRNA_C-australica_Contig_10100.1.1 ID=mRNA_C-australica_Contig_10100.1.1|Name=mRNA_C-australica_Contig_10100.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=813bp|location=Sequence derived from alignment at C-australica_Contig_10100:1..840- (Chrysoparadoxa australica CS_1217)back to top |