mRNA_C-australica_Contig_101.17.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Match: D8LKE1_ECTSI (Similar to retinitis pigmentosa GTPase regulator n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LKE1_ECTSI) HSP 1 Score: 414 bits (1065), Expect = 1.070e-129 Identity = 206/401 (51.37%), Postives = 268/401 (66.83%), Query Frame = 3 Query: 63 ATADDTPDQDKDKQQGGGVCRSVRTLPKQVDLQDW--EGEI-AEVAAGQTHSIARSKSGQVLLWGFFNGIPYPSPTLLTMRIPLPCIQIACGKKHTLALLEGGFVTSFGCGYFGQLGHGDNISYKDPCLILRLDPQRIDDKAVQVSAGAFHSAALMESGRIFQWGFNRYGQCGNGHKENTISSPLPVCLDHLAAPGSDMGKPVSVCCGRHHSALLTSTGRVYSWGSAMFGKLGQADPSKLVLKPQEVRAFSSKPVRAIAGGDFHMLAVTVDGRCYSWGHGGCGQCGHGVLLHVRQPRCIEALRGVSIKEVVCGTWWSMAVTDDGSVYAWGSADGGWTGLDQPVAPQVLQTDSPQSRCSDSVCLFDSSHNELVPTLVKSLAPYVVSQVACGAGHSLAIATLR 1256 ATA DT Q + + +C SV+ PK V L + +G+ A AAG HSI R+ G++ WG +G +P PT + +IPLPCI++ CG+KHT+AL++GGFV S+G GYFGQLGHGDN SY+ P L+ RLDPQR+ ++ VQV+ G +HSA ++GR+F WGFNRYGQCGNG K+NT+ P V L + PG+ +G+ V CGRHHSAL+T G +Y+WG+ FGKLG D K V PQEV FS KP+ A GDFHM+A++ +SWG+G GQ GHG LLH+R PR + +L+ V + +VVCG WWSMA+T DG YAWGSADGGWTGL +P +V+ R ++ FDS+HN VP LV SLAPY V QV CG GH+L +A R Sbjct: 14 ATASDTLAQQSKEPR---ICASVQETPKAVPLDRFVKKGDSPAFAAAGANHSILRTSEGKLFRWGVEDGDVHPFPTGVCTQIPLPCIEVCCGRKHTVALMKGGFVMSWGTGYFGQLGHGDNASYRHPRLLRRLDPQRLGERVVQVACGGYHSAVATDAGRVFTWGFNRYGQCGNGSKDNTVPEPSLVDLSRVT-PGA-VGEVPKVLCGRHHSALVTRGGALYTWGACSFGKLGLQDAEKTVCIPQEVTFFSDKPLVQAAAGDFHMVALSRKREVFSWGYGAEGQGGHGSLLHMRMPRRVSSLQEVPVAQVVCGPWWSMAITVDGYCYAWGSADGGWTGLTRPPGLRVVDPGPSADRAVETQS-FDSTHNVHVPALVYSLAPYKVLQVGCGGGHTLVVAKRR 408
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Match: K8Z8W0_NANGC (Hect domain and rld 4 (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z8W0_NANGC) HSP 1 Score: 343 bits (880), Expect = 1.350e-107 Identity = 180/429 (41.96%), Postives = 253/429 (58.97%), Query Frame = 3 Query: 30 CGYNWFRQLGPATADDTPDQD-----KDKQQGGGVC-------------RSVRTLPKQVDLQDW----EGEIAEVAAGQTHSIARSKSGQVLLWGFFNGIPYPSPTLLTMRIPLPCIQIACGKKHTLALLEGGFVTSFGCGYFGQLGHGDNISYKDPCLILRLDPQRID-DKAVQVSAGAFHSAALMESGRIFQWGFNRYGQCGNGHKENTISSPLPVCLDHLAAPGSDMGKPVSVCCGRHHSALLTSTGRVYSWGSAMFGKLGQADPSKLVLKPQEVRAFSSKPVRAIAGGDFHMLAVTVDGRCYSWGHGGCGQCGHGVLLHVRQPRCIEALRGVSIKEVVCGTWWSMAVTDDGSVYAWGSADGGWTGLDQPVAPQVLQTDSPQSRCSDSVCLFDSSHNELVPTLVKSLAPYVVSQVACGAGHSLAIA 1247 CG N F QLGP ++ P Q + G G +SV LP+ + L+ + +G + ++A G T +IA + G WG NG YP P+ +++ +PL C+Q++CG+KH LAL+EGGFVTS+G GYFGQLG GDN+S P LI LDP R+ D+ V V+ G HSA +F +GFNRYGQ G G N IS+P PV +++ GS + + CGRHH+++LT G+V+SWG++ FG+LG DP K+V P EV AF P+ A+A GDFH+L + VDGR Y+WG+G GQ G G LH+R PR +E L G I ++ CG WWSM VT+ G +Y WG DGGW GL++ ++ P ++ + C FDS N +P +V +L+ V +V G GH++ +A Sbjct: 58 CGINSFFQLGPLVSE-CPSQSAGAAAQASDDGSGAIIQGQNIHFSSQEKKSVLHLPQPLALERYVAEEDGLVQDIACGATFTIALTSRGVPYQWGTVNGRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPV---NMSGIGSSQIR--QLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYG-ATCSFDSDFNACLPAVVSTLSHLRVEKVVAGGGHTIIMA 479
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Match: W7U0Q3_9STRA (Putative e3 ubiquitin-protein ligase herc4 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U0Q3_9STRA) HSP 1 Score: 343 bits (880), Expect = 2.670e-107 Identity = 180/429 (41.96%), Postives = 253/429 (58.97%), Query Frame = 3 Query: 30 CGYNWFRQLGPATADDTPDQD-----KDKQQGGGVC-------------RSVRTLPKQVDLQDW----EGEIAEVAAGQTHSIARSKSGQVLLWGFFNGIPYPSPTLLTMRIPLPCIQIACGKKHTLALLEGGFVTSFGCGYFGQLGHGDNISYKDPCLILRLDPQRID-DKAVQVSAGAFHSAALMESGRIFQWGFNRYGQCGNGHKENTISSPLPVCLDHLAAPGSDMGKPVSVCCGRHHSALLTSTGRVYSWGSAMFGKLGQADPSKLVLKPQEVRAFSSKPVRAIAGGDFHMLAVTVDGRCYSWGHGGCGQCGHGVLLHVRQPRCIEALRGVSIKEVVCGTWWSMAVTDDGSVYAWGSADGGWTGLDQPVAPQVLQTDSPQSRCSDSVCLFDSSHNELVPTLVKSLAPYVVSQVACGAGHSLAIA 1247 CG N F QLGP ++ P Q + G G +SV LP+ + L+ + +G + ++A G T +IA + G WG NG YP P+ +++ +PL C+Q++CG+KH LAL+EGGFVTS+G GYFGQLG GDN+S P LI LDP R+ D+ V V+ G HSA +F +GFNRYGQ G G N IS+P PV +++ GS + + CGRHH+++LT G+V+SWG++ FG+LG DP K+V P EV AF P+ A+A GDFH+L + VDGR Y+WG+G GQ G G LH+R PR +E L G I ++ CG WWSM VT+ G +Y WG DGGW GL++ ++ P ++ + C FDS N +P +V +L+ V +V G GH++ +A Sbjct: 12 CGINSFFQLGPLVSE-CPSQSAGAAAQASDDGSGAIIQGQNIHFSSQEKKSVLHLPQPLALERYVAEEDGLVQDIACGATFTIALTSRGVPYQWGTVNGRAYPEPSRVSLGVPLRCLQVSCGRKHALALMEGGFVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPV---NMSGIGSSQIR--QLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYG-ATCSFDSDFNACLPAVVSTLSHLRVEKVVAGGGHTIIMA 433
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Match: A0A835Z434_9STRA (Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z434_9STRA) HSP 1 Score: 302 bits (774), Expect = 3.180e-94 Identity = 159/332 (47.89%), Postives = 203/332 (61.14%), Query Frame = 3 Query: 291 MRIPLPCIQIACGKKHTLALLEGGFVTSFGCGYFGQLGHGDNISYKDPCLILRLDPQRIDDKAVQVSAGAFHSAALMESGRIFQWGFNRYGQCGNGH-KENTISSPLPVCLDHLAAPGSDMGKPVSVCCGRHHSALLTSTGRVYSWGSAMFGKLGQADPSKLVLKPQEVRAFSSKPVRAI--AGGDFHMLAVTVDGRCYSWGHGGCGQCGHGVLLHVRQPRCIEALRGVSIKEVVCGTWWSMAVTDDGSVYAWGSADGGWTGLDQP------VAP-QVLQTDSPQSRCSDSVCLFDSSHNELVPTLVKSLAPYVVSQVACGAGHSLAIATLR 1256 M +PL +QIACG++H++AL+EGGFV ++G GYFGQLGHGDN S +P L+ +L+PQ+I V V+AG +HS A+ +GR F WGFNRYGQCG G + +S P V L L A G + + CGRHH + + G VY+WG+ FG+LG ADP K+ P EV A + V + A G++H LA T G YSWG+G GQCGHG H+R PR +E L+G + +V CG+ WSMAVT G +YAWG ADGGWTGL P V P V DS + S FDS H L+P V SL V VACG GH+L +A R Sbjct: 1 MGVPLAAVQIACGRRHSVALMEGGFVMTWGIGYFGQLGHGDNASCTNPRLLHQLEPQQI----VSVAAGGYHSVAVTRAGRGFAWGFNRYGQCGVGDCADAVVSEPRAVALRELRARGEGVR---AAACGRHHCVAVGTGGGVYAWGAGGFGRLGVADPPKVAPYPVEVGALRGQRVAEVRVACGEYHNLARTERGAVYSWGYGLDGQCGHGGAQHLRTPRIVERLKGNPVVQVACGSLWSMAVTSTGHLYAWGCADGGWTGLQCPPGVLRCVEPGPVAALDSEAGAAASSARTFDSDHIVLLPERVASLPGVAVEAVACGGGHTLVLARQR 325
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Match: A0A4D9DAH8_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DAH8_9STRA) HSP 1 Score: 305 bits (780), Expect = 3.870e-93 Identity = 152/343 (44.31%), Postives = 211/343 (61.52%), Query Frame = 3 Query: 267 YPSPTLLTMRIPLPCIQIACGKKHTLALLEGGFVTSFGCGYFGQLGHGDNISYKDPCLILRLDPQRID-DKAVQVSAGAFHSAALMESGRIFQWGFNRYGQCGNGHKENTISSPLPVCLDHLAAPGSDMGKPVSVCCGRHHSALLTSTGRVYSWGSAMFGKLGQADPSKLVLKPQEVRAFSSKPVRAIAGGDFHMLAVTVDGRCYSWGHGGCGQCGHGVLLHVRQPRCIEALRGVSIKEVVCGTWWSMAVTDDGSV---------------YAWGSADGGWTGLDQPVAPQVLQTDSPQSRCSDSVCLFDSSHNELVPTLVKSLAPYVVSQVACGAGHSLAIA 1247 YP P+ +++ +PL C+Q++CG+KH LAL+EGG+VTS+G GYFGQLG GDN+S P LI LDP R+ D+ V V+ G HSA +F +GFNRYGQ G G N IS+P PV +++ GS + + CGRHH+++LT G+V+SWG++ FG+LG DP K+V P EV AF P+ A+A GDFH+L + VDGR Y+WG+G GQ G G LH+R PR +E L G I ++ CG WWSM VT+ G V Y WG DGGW GL++ ++ P ++ + C FDS N +P +V +L+ V +V G GH++ +A Sbjct: 28 YPEPSRVSLGVPLRCLQVSCGRKHALALMEGGYVTSWGVGYFGQLGQGDNLSSDRPRLIHHLDPPRLGGDRVVAVACGGQHSAVHTAGQSVFCFGFNRYGQVGQGQACNKISTPRPV---NMSGIGSSQIR--QLVCGRHHTSVLTDKGQVFSWGASSFGRLGLPDPKKIVGLPTEVPAFRCCPLAALACGDFHVLGLGVDGRAYAWGYGSEGQGGLGATLHLRTPRPVEGLEGSRIAQIACGAWWSMVVTEAGCVGGKGRGGWRGVLVRLYTWGYGDGGWLGLERASKLPYVEPCPPVTKYG-ATCSFDSDFNACLPAVVSTLSHLRVEKVVAGGGHTIILA 364
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Match: A0A7S3GVQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GVQ9_9STRA) HSP 1 Score: 213 bits (541), Expect = 1.750e-61 Identity = 105/218 (48.17%), Postives = 143/218 (65.60%), Query Frame = 3 Query: 375 FGCGYFGQLGHGDNISYKDPCLILRLDPQRIDDKAVQVSAGAFHSAALMESGRIFQWGFNRYGQCGNG----HKENTISSPLPVCLDHLAAPGSDMGKPVSVCCGRHHSALLTSTGRVYSWGSAMFGKLGQADPSKLVLKPQEVRAFSSKPVRAIAGGDFHMLAVTVDGRCYSWGHGGCGQCGHGVLLHVRQPRCIEALRGVSIKEVVCGTWWSMAVT 1016 +G GYFGQLGHGD+ S+ P +I L+P+R+ K + V+ G HS + +SGR+F WG NR GQCG G K +++ P PV HLA G+ K S+ GR+HSA+L++TGRV++WG A FG+LG D K L P EV AFS PV ++ GDFHMLA+T DG+ YSWG+G GQ GH V+L+VR PR I+ + I++V CG +S+ +T Sbjct: 1 WGTGYFGQLGHGDDSSWDSPRMISVLEPKRLGAKVINVACGGSHSGVITDSGRVFMWGLNRSGQCGQGLSAKGKSDSVLEPRPVDFSHLANHGTLGVK--SLVLGRNHSAMLSTTGRVFTWGEAGFGRLGLNDVKKTQLIPAEVMAFSKNPVVTLSAGDFHMLALTQDGQVYSWGYGVDGQTGHCVMLNVRCPRRIDFFDTMHIRDVCCGAGYSLVLT 216
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Match: A0A812WWZ6_SYMMI (Rcbtb2 protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WWZ6_SYMMI) HSP 1 Score: 178 bits (452), Expect = 3.230e-48 Identity = 102/248 (41.13%), Postives = 139/248 (56.05%), Query Frame = 3 Query: 543 WGFNRYGQCGNGHKENTISSPLPVCLDHLAAPGSDMGK--PVSVCCGRHHSALLTSTGRVYSWGSAMFGKLGQADPSKLVLKPQEVRAFSSKPVRAIAGGDFHMLAVTVDGRCYSWGHGGCGQCGHGVLLHVRQPRCIEAL-RGVSIKEVVCGTWWSMAVTDDGSVYAWGSADGGWTGL-----------DQPVAPQVLQTDSPQSRCSDSVCL--FDSSHNELVPTLVKSLAPYVVSQVACGAGHSL 1238 WG NR GQ G G K +I P PV +D+G+ P + CGR+H+ LLT+ GRVYSWG+A FG+LG D K+ P+EV+ F + + IA GDFH LA+ +G +SWG+G GQCG+G ++VR PR I V I+++ CG+ WS A+T G++Y WG DGGW G+ +QP P +D +S +V FDS+ N L PT V A V CGAGH++ Sbjct: 2 WGLNRNGQTGTGVKAESILEPRPV-------DRTDIGRKVPSQLVCGRNHTCLLTTEGRVYSWGAAGFGRLGVMDSRKIQHTPREVQQFRNITCQYIAAGDFHTLAIDSEGAVFSWGYGLEGQCGNGSTMNVRTPRQIVFPDEDVEIQDLTCGSSWSFALTTTGALYTWGYGDGGWLGICPPAELPYVESEQPPPPVPRGSDYKKSSYYYNVYTRSFDSTLNVLRPTPVAMAADRYVKWTRCGAGHAI 242
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Match: I2CP66_NANGC (BTB domain-containing protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=I2CP66_NANGC) HSP 1 Score: 168 bits (425), Expect = 1.090e-41 Identity = 102/316 (32.28%), Postives = 152/316 (48.10%), Query Frame = 3 Query: 303 LPCIQIACGKKHTLALLEGGFVTSFGCGYFGQLGHGDNISYKDPCLILRLDPQRIDDKAVQVSAGAFHSAALMESGRIFQWGFNRYGQCGNGHKENTISSPLPVCLDHLAAPGSDMGKPVS-VCCGRHHSALLTSTGRVYSWGSAMFGKLGQADPSKLVLKPQEVRAFSSKPVRAIAGGDFHMLAVTVDGRCYSWGHGGCGQCGHGVLLHVRQPRCIEALRGVSIKEVVCGTWWSMAVTDDGSVYAWGSADGGWTGLDQPVAPQVLQTDSPQSRCSDSVCLFDSSHNELVPTLVKSLAPYVVSQVACGAGHSLAIA 1247 L +QIACG HT+ L E V S+G G G+LGH DN P L+ L + I QV+ G++H+AA+ ++G ++ WG YG+ G+G N + P P ++ +G+ V + CG H+A L + G VY WG G G + ++ P+++ A + IA FH A+T DG +SWG G G+ G G + P C+E L+GV +K+V CG + S VT+DG V +G + G G N VP LVK+L + QV CG H++ ++ Sbjct: 39 LTVVQIACGSGHTVVLTEDKDVWSWGRGDDGRLGHADNHWKYVPHLVSALTGKSIK----QVTCGSYHTAAISDTGALWTWGGGMYGKLGHG---NEVGHPAPCRVEAF------IGREVEQIACGSRHTAALLAGGEVYCWGDRENGVCGIGEAAEHQYLPKKLEALKGVKITQIAACGFHTAAITQDGALWSWGEGKFGRLGQGNEKNQVTPCCVEGLQGVRVKQVACGGFHSACVTEDGDVLTFGGGEHGQLG-------------------------HGDKTNRTVPCLVKALEGAGIVQVTCGWSHTVTLS 316
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Match: Q17IM6_AEDAE (HECT-type E3 ubiquitin transferase n=1 Tax=Aedes aegypti TaxID=7159 RepID=Q17IM6_AEDAE) HSP 1 Score: 172 bits (437), Expect = 2.360e-41 Identity = 127/406 (31.28%), Postives = 180/406 (44.33%), Query Frame = 3 Query: 96 DKQQGGGVCRSVRTLPKQVDLQDWEGEIAEVAAGQTHSIARSKSGQV----------LLWGFFNGIPYPSPTLLTMRIPLPCIQIACGKKHTLALLEGGFVTSFGCGYFGQLGHGDNISYKDPCLILRLDPQRIDDKAVQVSAGAFHSAALMESGRIFQWGFNRYGQCGNGHKENTISSPLPVCLDHLAAPGSDMGKPVSVCCGRH--HSALLTSTGRVYSWGSAMFGKLGQADPSKLVLKPQEVRAFSSKPVRAIAGGDFHMLAVTVDGRCYSWGHGGCGQCGHGVLLHVRQPRCIEALRGVSIKEVVCGTWWSMAVTDDGSVYAWGSADGGWTGLDQPVAPQVLQTDSPQSRCSDSVCLFDSSHNELVPTLVKSLAPYVVSQVACGAGHSLAIATLREPSGKSK 1277 DK+Q GG+ S LP + I +A G S+ G++ L G N +P P + + + + + G KH +AL G V S+G G G+LGHG+ ++ + P LI L +R+ D ++ G+ HSAA+ SG ++ WG YG+ G+G + L L + V V CG + LT G V+SWG FGKLG+ S+ P +V +S V I G LA+T G ++WG G + GHG HVR+P I+ LRG + V G +AVTD G VYAWG D G G V + P LV L V++VACG+ HS+A + + PS K K Sbjct: 2901 DKEQLGGLKGSKVKLPTYSSVLSQLKPI-HIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRD----IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGH--------RVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGG-SEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKK-------------------------PNLVLGLDGVFVNRVACGSSHSVAWSLPQNPSEKDK 3267
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Match: A0A1S4F1D4_AEDAE (HECT-type E3 ubiquitin transferase n=1 Tax=Aedes aegypti TaxID=7159 RepID=A0A1S4F1D4_AEDAE) HSP 1 Score: 172 bits (437), Expect = 2.360e-41 Identity = 127/406 (31.28%), Postives = 180/406 (44.33%), Query Frame = 3 Query: 96 DKQQGGGVCRSVRTLPKQVDLQDWEGEIAEVAAGQTHSIARSKSGQV----------LLWGFFNGIPYPSPTLLTMRIPLPCIQIACGKKHTLALLEGGFVTSFGCGYFGQLGHGDNISYKDPCLILRLDPQRIDDKAVQVSAGAFHSAALMESGRIFQWGFNRYGQCGNGHKENTISSPLPVCLDHLAAPGSDMGKPVSVCCGRH--HSALLTSTGRVYSWGSAMFGKLGQADPSKLVLKPQEVRAFSSKPVRAIAGGDFHMLAVTVDGRCYSWGHGGCGQCGHGVLLHVRQPRCIEALRGVSIKEVVCGTWWSMAVTDDGSVYAWGSADGGWTGLDQPVAPQVLQTDSPQSRCSDSVCLFDSSHNELVPTLVKSLAPYVVSQVACGAGHSLAIATLREPSGKSK 1277 DK+Q GG+ S LP + I +A G S+ G++ L G N +P P + + + + + G KH +AL G V S+G G G+LGHG+ ++ + P LI L +R+ D ++ G+ HSAA+ SG ++ WG YG+ G+G + L L + V V CG + LT G V+SWG FGKLG+ S+ P +V +S V I G LA+T G ++WG G + GHG HVR+P I+ LRG + V G +AVTD G VYAWG D G G V + P LV L V++VACG+ HS+A + + PS K K Sbjct: 2985 DKEQLGGLKGSKVKLPTYSSVLSQLKPI-HIAGGSKSLFIVSQDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESLRTKRVRD----IACGSSHSAAITSSGELYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGH--------RVVQVACGSRDAQTLCLTEEGLVFSWGDGDFGKLGRGG-SEGCSVPHQVERLNSVGVMQIECGAQFSLALTKSGEVWTWGKGDYYRLGHGTDQHVRKPTPIQGLRGKKVIHVAVGALHCLAVTDSGQVYAWGDNDHGQQGSGNTVVNKK-------------------------PNLVLGLDGVFVNRVACGSSHSVAWSLPQNPSEKDK 3351 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_101.17.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_101.17.1 >prot_C-australica_Contig_101.17.1 ID=prot_C-australica_Contig_101.17.1|Name=mRNA_C-australica_Contig_101.17.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=430bp MASAVLSCGYNWFRQLGPATADDTPDQDKDKQQGGGVCRSVRTLPKQVDLback to top mRNA from alignment at C-australica_Contig_101:47670..50652- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_101.17.1 ID=mRNA_C-australica_Contig_101.17.1|Name=mRNA_C-australica_Contig_101.17.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2983bp|location=Sequence derived from alignment at C-australica_Contig_101:47670..50652- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_101:47670..50652- >mRNA_C-australica_Contig_101.17.1 ID=mRNA_C-australica_Contig_101.17.1|Name=mRNA_C-australica_Contig_101.17.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1290bp|location=Sequence derived from alignment at C-australica_Contig_101:47670..50652- (Chrysoparadoxa australica CS_1217)back to top |