mRNA_C-australica_Contig_101.16.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Match: A0A835Z468_9STRA (Protein yippee-like n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z468_9STRA) HSP 1 Score: 122 bits (306), Expect = 2.130e-33 Identity = 62/139 (44.60%), Postives = 76/139 (54.68%), Query Frame = 1 Query: 1 MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNPWKEMAGLVNDLCNLYFGGLCDDDCTARPDLPLLPPCAPSSSSQGPFVKRTLTTGLHTVADIYCQGCQTLVGWKYENAYEESQKYKEGK 417 MGR+F RYLE +YSC ECG H ++ IIS+NF G+ G+A+LF+ VN +QGP KR L TG+HTVADIYC CQ+LVGW+YE A+EESQKYKEGK Sbjct: 1 MGRIFKRYLEGPQIYSCLECGTHFTTKQDIISENFHGRGGRAFLFNQAVNV-----------------------------------------TQGPLEKRMLITGMHTVADIYCVDCQSLVGWRYERAFEESQKYKEGK 98
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Match: A0A1Y1IRS2_KLENI (Protein yippee-like n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IRS2_KLENI) HSP 1 Score: 115 bits (289), Expect = 2.170e-30 Identity = 60/139 (43.17%), Postives = 75/139 (53.96%), Query Frame = 1 Query: 1 MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNPWKEMAGLVNDLCNLYFGGLCDDDCTARPDLPLLPPCAPSSSSQGPFVKRTLTTGLHTVADIYCQGCQTLVGWKYENAYEESQKYKEGK 417 MGR+F +YL +YSC C H + + +IISK FQG++G+AYLF++VVN + GP R LTTGLHTVADIYC CQ ++GWKYE AY+ESQKYKEGK Sbjct: 34 MGRIFRQYLNGPRIYSCSNCRCHSADHDEIISKQFQGRYGRAYLFNSVVNV-----------------------------------------TLGPKEDRHLTTGLHTVADIYCSCCQQILGWKYEQAYDESQKYKEGK 131
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Match: A0A5B8MU59_9CHLO (Protein yippee-like n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MU59_9CHLO) HSP 1 Score: 112 bits (280), Expect = 1.980e-29 Identity = 60/139 (43.17%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 1 MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNPWKEMAGLVNDLCNLYFGGLCDDDCTARPDLPLLPPCAPSSSSQGPFVKRTLTTGLHTVADIYCQGCQTLVGWKYENAYEESQKYKEGK 417 MGRLF +YL +YSC C H S + +I+SK FQG+ G+AYLF+ VVN + GP R L TGLHTVADIYC CQ ++GWKYE A+EESQKYKEGK Sbjct: 1 MGRLFKQYLNGPRIYSCSNCRCHTSDHDEIVSKAFQGRHGRAYLFNNVVNV-----------------------------------------TLGPKEDRLLITGLHTVADIYCSCCQQVLGWKYEQAFEESQKYKEGK 98
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Match: A0A7S0PYG5_9EUKA (Protein yippee-like n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PYG5_9EUKA) HSP 1 Score: 112 bits (279), Expect = 7.470e-29 Identity = 58/139 (41.73%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 1 MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNPWKEMAGLVNDLCNLYFGGLCDDDCTARPDLPLLPPCAPSSSSQGPFVKRTLTTGLHTVADIYCQGCQTLVGWKYENAYEESQKYKEGK 417 MGRLFL Y+E+++++ C ECG HL+++ IISK FQG+ G+AYLF VVN + GP R L TGLH VADI+C C T +GWKY A+EE+QKYKEGK Sbjct: 1 MGRLFLEYVEAEDVHCCAECGTHLAAHDTIISKAFQGRHGRAYLFSDVVNI-----------------------------------------NSGPTENRLLLTGLHVVADIFCNACDTRLGWKYVEAFEENQKYKEGK 98
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Match: A0A7S3RC72_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3RC72_9SPIT) HSP 1 Score: 113 bits (283), Expect = 1.400e-28 Identity = 61/139 (43.88%), Postives = 74/139 (53.24%), Query Frame = 1 Query: 1 MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNPWKEMAGLVNDLCNLYFGGLCDDDCTARPDLPLLPPCAPSSSSQGPFVKRTLTTGLHTVADIYCQGCQTLVGWKYENAYEESQKYKEGK 417 MGRLFLRY+E+ ++ C CG HLSS+ I+SK FQG+ G+A+LF VVN ++GP KR L TGLH VADIYC C+T +GWKY AYEE QKYKEGK Sbjct: 11 MGRLFLRYVEADVVHCCTICGTHLSSHDHIVSKAFQGRHGRAFLFADVVNV-----------------------------------------NEGPPEKRLLLTGLHVVADIYCNACETRLGWKYLEAYEEGQKYKEGK 108
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Match: A0A7S0WSD2_9CHLO (Protein yippee-like n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0WSD2_9CHLO) HSP 1 Score: 109 bits (273), Expect = 2.280e-28 Identity = 58/139 (41.73%), Postives = 72/139 (51.80%), Query Frame = 1 Query: 1 MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNPWKEMAGLVNDLCNLYFGGLCDDDCTARPDLPLLPPCAPSSSSQGPFVKRTLTTGLHTVADIYCQGCQTLVGWKYENAYEESQKYKEGK 417 MGRLF +YL +YSC C H + + +IISK+FQG+ G+A+LF VVN + GP R L TGLHTVADIYC CQ ++GWKYE A+EE+QKYKEGK Sbjct: 1 MGRLFKQYLSGPRIYSCSNCRTHSADHDEIISKSFQGRHGRAFLFSNVVNV-----------------------------------------TLGPKEDRLLITGLHTVADIYCSCCQAVLGWKYEQAFEENQKYKEGK 98
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Match: L8HJV6_ACACA (Protein yippee-like n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJV6_ACACA) HSP 1 Score: 108 bits (271), Expect = 4.710e-28 Identity = 59/139 (42.45%), Postives = 68/139 (48.92%), Query Frame = 1 Query: 1 MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNPWKEMAGLVNDLCNLYFGGLCDDDCTARPDLPLLPPCAPSSSSQGPFVKRTLTTGLHTVADIYCQGCQTLVGWKYENAYEESQKYKEGK 417 MG+LF YL +Y C C HL+ + IISK FQ + GKAYLFD VVN + GP R L TGLHTVAD++C CQ VGWKYE A+EESQKYKEGK Sbjct: 1 MGKLFKSYLSGPGVYKCHSCDTHLAKHGDIISKAFQSRSGKAYLFDKVVNV-----------------------------------------TSGPKEDRILITGLHTVADVFCSDCQAYVGWKYEEAFEESQKYKEGK 98
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Match: R1BYG5_EMIHU (Protein yippee-like (Fragment) n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BYG5_EMIHU) HSP 1 Score: 107 bits (267), Expect = 1.130e-27 Identity = 56/136 (41.18%), Postives = 73/136 (53.68%), Query Frame = 1 Query: 1 MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNPWKEMAGLVNDLCNLYFGGLCDDDCTARPDLPLLPPCAPSSSSQGPFVKRTLTTGLHTVADIYCQGCQTLVGWKYENAYEESQKYK 408 MGRLFLRY+E+++++ C C HL+++ Q++S+ F+G+ G A+LF V+N VND GP KR L TGLH VADIYC GC T +GWKY AYEE QKYK Sbjct: 1 MGRLFLRYIEAESVHCCALCATHLAAHDQVVSRQFRGRHGDAWLFGDVIN--------VND---------------------------------GPPEKRLLLTGLHVVADIYCNGCDTRLGWKYVEAYEEQQKYK 95
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Match: A0A7S0I5S9_9EUKA (Protein yippee-like (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I5S9_9EUKA) HSP 1 Score: 107 bits (268), Expect = 2.180e-27 Identity = 59/139 (42.45%), Postives = 70/139 (50.36%), Query Frame = 1 Query: 1 MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNPWKEMAGLVNDLCNLYFGGLCDDDCTARPDLPLLPPCAPSSSSQGPFVKRTLTTGLHTVADIYCQGCQTLVGWKYENAYEESQKYKEGK 417 MGRLFL Y+E+ +Y C C HLS++ IISK FQG+ G+AYLF VVN + GP R L TGLH VADIYC C T +GWKY A+EESQKYKEG+ Sbjct: 1 MGRLFLEYVEAPCVYVCLSCRTHLSAHDSIISKAFQGRHGRAYLFADVVNI-----------------------------------------NSGPTENRLLLTGLHVVADIYCNACDTRLGWKYVEAFEESQKYKEGR 98
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Match: M2WVM1_GALSU (Protein yippee-like n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WVM1_GALSU) HSP 1 Score: 107 bits (266), Expect = 2.690e-27 Identity = 58/139 (41.73%), Postives = 69/139 (49.64%), Query Frame = 1 Query: 1 MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNPWKEMAGLVNDLCNLYFGGLCDDDCTARPDLPLLPPCAPSSSSQGPFVKRTLTTGLHTVADIYCQGCQTLVGWKYENAYEESQKYKEGK 417 MGRLF YL +Y C C HL+ + I+SK FQG+ G+AYLF+ VVN S GP +R L TGLHTVADIYC C T++GWKY AYEESQ+YKE K Sbjct: 1 MGRLFKTYLSGSTIYCCSTCKCHLAVHEDIMSKQFQGRHGRAYLFNNVVNI-----------------------------------------SLGPKEERVLITGLHTVADIYCNVCHTVIGWKYLEAYEESQRYKENK 98 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_101.16.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_101.16.1 >prot_C-australica_Contig_101.16.1 ID=prot_C-australica_Contig_101.16.1|Name=mRNA_C-australica_Contig_101.16.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=144bp MGRLFLRYLESQNLYSCCECGAHLSSNSQIISKNFQGKWGKAYLFDTVVNback to top mRNA from alignment at C-australica_Contig_101:47226..47693+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_101.16.1 ID=mRNA_C-australica_Contig_101.16.1|Name=mRNA_C-australica_Contig_101.16.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=468bp|location=Sequence derived from alignment at C-australica_Contig_101:47226..47693+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_101:47226..47693+ >mRNA_C-australica_Contig_101.16.1 ID=mRNA_C-australica_Contig_101.16.1|Name=mRNA_C-australica_Contig_101.16.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=432bp|location=Sequence derived from alignment at C-australica_Contig_101:47226..47693+ (Chrysoparadoxa australica CS_1217)back to top |