mRNA_C-australica_Contig_101.12.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_101.12.1
Unique NamemRNA_C-australica_Contig_101.12.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
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BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Match: A0A6H5JXR4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXR4_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 2.820e-19
Identity = 130/519 (25.05%), Postives = 191/519 (36.80%), Query Frame = 1 
Query:   37 VVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVYSKRPGDP-VPGIHEDESG----LLMALCESEKGQEHFTYMIMRMPYEG----SEEDRARVALAKGLRHHPAIMQLVRSLTQTYYFHLHPEEVCERPKQIDAPPLDMQLSLYKNGKVAKA---------------PEAKGL-------------------------------------------SKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSL-------------------KILPDSP------ELNVTGRIFYYPYVQGESRPTSQVITVDDSDEDEDRESPRQEGDQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKWRNRIKCMLFFHWDAPISSNKLKLNFNLQDTIGGVGDDKKMITPLDPKTPKP---------EFAKWLAKCHKRFDKETTFSERVADTPVDGSEHGARWNKCLYGTGEEVGKGQHVAIRVTMKGRGGKKRDVYGTVQHFDT 1290
            VVTKT R P+V  F M+E  F+ +++++   ++   +  + PG     G   + +G    LL  L   E G+ HFTY+++ +  +     S  D+                 L R L   Y+++LHPE  C    Q D    DM  S   N +                   P  +G                                            S+R       ++ DD+ S+  A  +  F F   +                    +LPD+        + VTG I YYPY  GE     QV               R + + D+   +  FW+ R +PES    L FFPS +  K+   A     +G  WR RIK MLFF W+ PIS+NKLKL F   D    +  +   + P  P    P         EF +WL KCH+  D E  F +++   P   S    +W    +G G   G       RV +      K +VYG + +F T
Sbjct:  178 VVTKTARLPDVCEFVMNEAEFERRAETN-SAMFRDKIKQRNPGKSRAEGPEAERNGPAHELLGRLRAQEVGKSHFTYIVLTLRDQHVEWFSNHDKG---------------SLKRELASIYHYYLHPEH-CPGGIQRDD---DMPSSFEDNNRAGADGRGEEGAASSTTHGDPGGQGSGAIXXXXXXXXXQRALEITYTRRNRSGQPADVCRLGDITDDVESRRRLYSRSDAIKDDVESRLNAARKDSFMFHMEVLHPMVNPRDETKRLPVTVRSLLPDASVAAEARRVPVTGVIHYYPY-DGEKETRPQV---------------RPDEEDDESITIEAFWEGRLVPESHAAWLPFFPSHKPNKKEREA-----LGTSWRRRIKGMLFFDWNFPISNNKLKLQFLEGDLHTALNAN--YLPPKHPAVIYPGVRGRNIQKEFREWLIKCHETLDVEYRFDDKM---PSPASSKYIKWRTMTFGKG---GSTFTTESRVKLPFM---KPNVYGVINYFRT 644
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BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Match: UPI0007AC96AB (structural maintenance of chromosomes flexible hinge domain-containing protein 1 n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=UPI0007AC96AB)

HSP 1 Score: 98.6 bits (244), Expect = 1.050e-17
Identity = 145/572 (25.35%), Postives = 246/572 (43.01%), Query Frame = 1 
Query:    1 KEAAFYIGDAVTVVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVYSKRPGDPVPGIHEDESGLLMALCESEKGQEHFTYMIMRMPYEGSEEDRARVALAKGLRHHPAIMQLVRSLTQTYYFH-LHPEEVCERPKQIDAPPLDMQLSLYKNGKVAKAPEAKGLSKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSLKILPDSPELNVTGRIFYYPYVQG-ESRPTSQVITVDDSDEDEDRESPRQEGDQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKWRNRIKCMLFFHWDAPISSNKLK---LNFNLQDT---IGGVGDDKKMITPLDPKTPKPEFAKWLAKCHKRFDKETTF-----SERVADTPVDGSEHGARWNKCLYGTGEEVGKGQHVAIRVTMKGRGGKKRDVY-GTVQHFDTLRGAGQTWYAGVGYVSILEDSRPEPLQDVHRL----QIERLELATCRLRDEEFAEKKKELNAHCPDSVELFNGQSLVTNEEPLTWSCTD-EPRSQTKG-LQLYIKSKKGEPVCKLDKLATAADLEVRL 1656
            K+A FYIG +V +++K    P+V  F M ++ F E+ + + E +YTG + +++P D    + E E   L ++   EK ++ FT +I+     G +++         L+H+ ++     + T  YY H +H  +  E  K      +D+Q+SL     V ++P    +      ++L  V +D+ + ++  + S F+F    K +  + +  V G I Y+P++   E+ P          DEDED      E  +        FW  R IP ++ ++   F      K+V +      + L+  NRI  +LF +    +S+NKL    L   L+D       V + +++   +       EF  WL +CH+RFDK+  F     S    D P    +      + +   G+   KGQ V        +  K   V+ G++ HF          YA  GYV I  +  P+ L D  R+    +I+RL  A         A  KK++     D +     Q  VT  E   W+     P     G +++ I +KKG+PV +L    T   L + L
Sbjct:  232 KQAVFYIGQSVRMISKPAGSPDVHEFVMSKEDF-ERKEMNREDIYTGFIRNRKPAD-CSHVSESEEQFLQSIVMEEKEKQSFTAVIIT----GVQQEHVTF-----LKHNFSLWTRELAHTYHYYIHGVHGNDQRETRKNDHVSNIDIQISL-----VERSPRIPSM------LNLREVDNDMQTLYINSSFSTFEF----KAI-GARDSFVEGLIRYHPFLYDQETYPVDPYALGPSEDEDEDCLILNSEA-RGKRPVFECFWNGRLIPYTTVSE---FEWCARPKKVGA------VPLECYNRISGVLFANDRFQVSTNKLTFMDLELQLRDNNTIFTRVHNGQELRVNIQR-----EFTNWLKECHERFDKQVMFQGFKGSMTRTDVPTKRQQSPWAVFQAIKWDGKTYKKGQCV--------KSVKTNPVFVGSIVHFLLYGEHEGDVYATGGYVQIALE--PKELYDEVRIIPISKIDRLAAA---------ATIKKKIE----DELAKLPDQLRVTWPEGNAWAEDGARPAGTLMGPIKVEILNKKGDPVSRLPVAGTTKKLLIEL 738
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BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Match: A0A672NK77_SINGR (Structural maintenance of chromosomes flexible hinge domain containing 1 n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672NK77_SINGR)

HSP 1 Score: 97.8 bits (242), Expect = 1.840e-17
Identity = 142/571 (24.87%), Postives = 246/571 (43.08%), Query Frame = 1 
Query:    1 KEAAFYIGDAVTVVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVYSKRPGDPVPGIHEDESGLLMALCESEKGQEHFTYMIMRMPYEGSEEDRARVALAKGLRHHPAIMQLVRSLTQTYYFH-LHPEEVCERPKQIDAPPLDMQLSLYKNGKVAKAPEAKGLSKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSLKILPDSPELNVTGRIFYYPYVQGESRPTSQVITVDDSDEDEDRESPRQEGDQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKWRNRIKCMLFFHWDAPISSNKLK---LNFNLQDT---IGGVGDDKKMITPLDPKTPKPEFAKWLAKCHKRFDKETTF-----SERVADTPVDGSEHGARWNKCLYGTGEEVGKGQHVAIRVTMKGRGGKKRDVY-GTVQHFDTLRGAGQTWYAGVGYVSILEDSRPEPLQDVHRL----QIERLELATCRLRDEEFAEKKKELNAHCPDSVELFNGQSLVTNEEPLTWSCTD-EPRSQTKG-LQLYIKSKKGEPVCKLDKLATAADLEVRL 1656
            K+A FYIG +V +++K    P+V  F M ++ F E+ + + E +YTG + +++P D    + E E   L ++   EK ++ FT +I+     G +++         L+H+ ++     + T  YY H +H  +  E  K      +D+Q+SL     V ++P    +      ++L  V +D+ + ++  + S F+F    K +  + +  V G I Y+P++  +         ++D DED    +    G +        FW  R IP ++ ++   F      K+V +      + L+  NRI  +LF +    +S+NKL    L   L+D       V + +++   +       EF  WL +CH+RFDK+  F     S    D P    +      + +   G+   KGQ V        +  K   V+ G++ HF          YA  GYV I  +  P+ L D  R+    +I+RL  A         A  KK++     D +     Q  VT  E   W+     P     G +++ I +KKG+PV +L    T   L + L
Sbjct:  232 KQAVFYIGQSVRMISKPAGSPDVHEFVMSKEDF-ERKEMNREDIYTGFIRNRKPAD-CSHVSESEEQFLQSIVMEEKEKQSFTAVIIT----GVQQEHVTF-----LKHNFSLWTRELAHTYHYYIHGVHGNDQRETRKNDHVSNIDIQISL-----VERSPRIPSM------LNLREVDNDMQTLYINSSFSTFEF----KAI-GARDSFVEGLIRYHPFLYDQETYPVDPYALEDEDEDCLILNSEARGKR---PVFECFWNGRLIPYTTVSE---FEWCARPKKVGA------VPLECYNRISGVLFANDRFQVSTNKLTFMDLELQLRDNNTIFTRVHNGQELRVNIQR-----EFTNWLKECHERFDKQVMFQGFKGSMTRTDVPTKRQQSPWAVFQAIKWDGKTYKKGQCV--------KSVKTNPVFVGSIVHFLLYGEHEGDVYATGGYVQIALE--PKELYDEVRIIPISKIDRLAAA---------ATIKKKIE----DELAKLPDQLRVTWPEGNAWAEDGARPAGTLMGPIKVEILNKKGDPVSRLPVAGTTKKLLIEL 735
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BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Match: A0A672NKW1_SINGR (Structural maintenance of chromosomes flexible hinge domain containing 1 n=2 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672NKW1_SINGR)

HSP 1 Score: 97.8 bits (242), Expect = 1.850e-17
Identity = 142/571 (24.87%), Postives = 246/571 (43.08%), Query Frame = 1 
Query:    1 KEAAFYIGDAVTVVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVYSKRPGDPVPGIHEDESGLLMALCESEKGQEHFTYMIMRMPYEGSEEDRARVALAKGLRHHPAIMQLVRSLTQTYYFH-LHPEEVCERPKQIDAPPLDMQLSLYKNGKVAKAPEAKGLSKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSLKILPDSPELNVTGRIFYYPYVQGESRPTSQVITVDDSDEDEDRESPRQEGDQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKWRNRIKCMLFFHWDAPISSNKLK---LNFNLQDT---IGGVGDDKKMITPLDPKTPKPEFAKWLAKCHKRFDKETTF-----SERVADTPVDGSEHGARWNKCLYGTGEEVGKGQHVAIRVTMKGRGGKKRDVY-GTVQHFDTLRGAGQTWYAGVGYVSILEDSRPEPLQDVHRL----QIERLELATCRLRDEEFAEKKKELNAHCPDSVELFNGQSLVTNEEPLTWSCTD-EPRSQTKG-LQLYIKSKKGEPVCKLDKLATAADLEVRL 1656
            K+A FYIG +V +++K    P+V  F M ++ F E+ + + E +YTG + +++P D    + E E   L ++   EK ++ FT +I+     G +++         L+H+ ++     + T  YY H +H  +  E  K      +D+Q+SL     V ++P    +      ++L  V +D+ + ++  + S F+F    K +  + +  V G I Y+P++  +         ++D DED    +    G +        FW  R IP ++ ++   F      K+V +      + L+  NRI  +LF +    +S+NKL    L   L+D       V + +++   +       EF  WL +CH+RFDK+  F     S    D P    +      + +   G+   KGQ V        +  K   V+ G++ HF          YA  GYV I  +  P+ L D  R+    +I+RL  A         A  KK++     D +     Q  VT  E   W+     P     G +++ I +KKG+PV +L    T   L + L
Sbjct:  236 KQAVFYIGQSVRMISKPAGSPDVHEFVMSKEDF-ERKEMNREDIYTGFIRNRKPAD-CSHVSESEEQFLQSIVMEEKEKQSFTAVIIT----GVQQEHVTF-----LKHNFSLWTRELAHTYHYYIHGVHGNDQRETRKNDHVSNIDIQISL-----VERSPRIPSM------LNLREVDNDMQTLYINSSFSTFEF----KAI-GARDSFVEGLIRYHPFLYDQETYPVDPYALEDEDEDCLILNSEARGKR---PVFECFWNGRLIPYTTVSE---FEWCARPKKVGA------VPLECYNRISGVLFANDRFQVSTNKLTFMDLELQLRDNNTIFTRVHNGQELRVNIQR-----EFTNWLKECHERFDKQVMFQGFKGSMTRTDVPTKRQQSPWAVFQAIKWDGKTYKKGQCV--------KSVKTNPVFVGSIVHFLLYGEHEGDVYATGGYVQIALE--PKELYDEVRIIPISKIDRLAAA---------ATIKKKIE----DELAKLPDQLRVTWPEGNAWAEDGARPAGTLMGPIKVEILNKKGDPVSRLPVAGTTKKLLIEL 739
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BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Match: A0A0G2L6F5_DANRE (Structural maintenance of chromosomes flexible hinge domain-containing 1 n=2 Tax=Danio rerio TaxID=7955 RepID=A0A0G2L6F5_DANRE)

HSP 1 Score: 97.4 bits (241), Expect = 2.460e-17
Identity = 132/568 (23.24%), Postives = 246/568 (43.31%), Query Frame = 1 
Query:    1 KEAAFYIGDAVTVVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVYSKRPGDPVPGIHEDESGLLMALCESEKGQEHFTYMIMRMPYEGSEEDRARVALAKGLRHHPAIMQLVRSLTQTYYFHLHPEE---VCERPKQIDAPPLDMQLSLYKNGKVAKAPEAKGLSKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSLKILPDSPELNVTGRIFYYPYVQGESRPTSQVITVDDSDEDEDRESPRQEGDQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKWRNRIKCMLFFHWDAPISSNKL-----KLNFNLQDTIGGVGDDKKMITPLDPKTPKPEFAKWLAKCHKRFDKETTFSERVAD-TPVD-GSEHGARWN--KCLYGTGEEVGKGQHVAIRVTMKGRGGKKRDVYGTVQHFDTLRGAGQTWYAGVGYVSILEDSRPEPLQDVHR-LQIERLE-LATCRLRDEEFAEKKKELNAHCPDSVELFNGQSLVTNEEPLTWSCTDE-PRSQTKG-LQLYIKSKKGEPVCKLDKLATAADLEVRL 1656
            K+A FYIG +V +++K    P+V  F M +  F+ K ++  E +Y+G + +++PGD    + + E   L ++   E G+E FT +++     G +++         L+ H   +   R L  TY++++H  +     E  K   +  +D+Q+SL++     + P           ++L  V +D+ + +V  + + F+F  +      + +  V G I Y+P++                DEDE+ E    EG +        FW  R IP ++ ++   FP  +  K+         + L+  NRI  +LF +    +S+NKL     +L    +DTI   G  +++         + EF  WL  CH+ FDK+  F   +++ T  D  ++    W   + +   G+   +GQ+V    T       K  +YG++  F          YA  G+  I  +  P+ L D  + + I +++ +AT +  +E    +  +L    PD ++       +T  E   W   D  P     G +++ I ++KG  + +L        L V L
Sbjct:  234 KQAVFYIGQSVRMISKPASSPDVHEFIMSKDDFERKERNK-EDIYSGFIRNRKPGD-CSHVDKSEEMFLQSIMREEIGKESFTAVVIT----GIQQEHINY-----LKQH--FILWTRELAHTYHYYIHGVDGNVKNEMKKTESSSNIDIQISLFERS--TRVPRI---------INLREVDNDMQTLYVRSSANTFEFKAT-----GAKDSLVEGLIRYHPFLYDRETFPVDPYAASAEDEDEELEVLNPEG-RGKRPIFECFWNGRLIPYTTVSE---FPWCERPKKGGI------VPLECYNRISGVLFANDRFQVSTNKLTFMDLELQLRDKDTIFNNGQGQRVNI-------EKEFTNWLKTCHESFDKQVMFQGYISNVTRTDVATKRQFPWAGFEAIQWDGKTYKRGQYVKTVKT-------KPILYGSILQFLLYGACDGDVYATGGFAQIALE--PKELYDEKKVIPISKIDRMATAKAIEENIENELAKL----PDQLK-------ITWPEGNAWEDKDAYPAGTPMGPIKVEILNRKGYSISRLPGTGNIKKLVVEL 735
[Close]
BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Match: A0A671KAI2_9TELE (Structural maintenance of chromosomes flexible hinge domain-containing protein 1-like n=3 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671KAI2_9TELE)

HSP 1 Score: 95.9 bits (237), Expect = 7.420e-17
Identity = 140/571 (24.52%), Postives = 242/571 (42.38%), Query Frame = 1 
Query:    1 KEAAFYIGDAVTVVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVYSKRPGDPVPGIHEDESGLLMALCESEKGQEHFTYMIMRMPYEGSEEDRARVALAKGLRHHPAIMQLVRSLTQTYYFHLHP---EEVCERPKQIDAPPLDMQLSLYKNGKVAKAPEAKGLSKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSLKILPDSPELNVTGRIFYYPYVQGESRPTSQVITVDDSDEDEDRESPRQEGDQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKWRNRIKCMLFFHWDAPISSNKLK---LNFNLQDT---IGGVGDDKKMITPLDPKTPKPEFAKWLAKCHKRFDKETTF-----SERVADTPVDGSEHGARWNKCLYGTGEEVGKGQHVAIRVTMKGRGGKKRDVY-GTVQHFDTLRGAGQTWYAGVGYVSILEDSRPEPLQDVHRL----QIERLELATCRLRDEEFAEKKKELNAHCPDSVELFNGQSLVTNEEPLTWSCTDEPRSQTKGLQLYIKSKKGEPVCKLDKLATAADLEVRL 1656
            K+A FYIG +V +++K    P+V  F M ++ F E+ + + E +YTG + +++P D    + E E   L ++   EK +E FT +I+     G +++                    R L  TY++++H     +  E  K      +D+Q+SL     V ++P    +      ++L  V +D+ + ++  + S F+F  +      + +  V G I Y+P++  +         ++D DE+    +    G +        FW  R IP ++ ++   F      K+V +      + L+  NRI  +LF +    +S+NKL    L   L+D+      V + +++   +       EF  WL +CH+RFDK+  F     S    D P    +      + +   G+   KGQ V        +  K   V+ G++ HF          YA  GYV I  +  P+ L D  R+    +I+RL  AT         +K ++  A  PD       Q  VT  E   W+  D   + T  L + I +KKG+ V +L    T   L + L
Sbjct:  179 KQAVFYIGQSVRMISKPAGSPDVHEFVMSKEDF-ERKEMNREDIYTGFIRNRKPAD-CSHVSESEEQFLQSIVMEEKEKESFTAVIIT----GVQQEHVTYLKDN-------FNLWTRELAHTYHYYIHGVHGNDQRETRKNDHVSNIDIQISL-----VERSPRIPRM------MNLREVDNDMQTLYINSSFSTFEFKAT-----GARDSFVEGLIRYHPFLYDQETYPVDPYALEDEDEECVILNSEARGKR---PVFECFWNGRLIPYTTVSE---FEWCARPKKVGA------VPLECYNRISGVLFANDRFQVSTNKLTFMDLELQLRDSNTIFTRVHNGQELRVNIQR-----EFTNWLKECHERFDKQVMFQGFKGSMTRTDVPTKRQQSPWAIFQAIKWDGKTYKKGQCV--------KSVKTNPVFVGSIVHFLLYGEHEGDVYATGGYVQIALE--PKELYDEVRIIPISKIDRLAAATT------IKKKIEDELAKLPD-------QLRVTWPEGNAWAEDDARPAGT--LMVEILNKKGDSVSRLPVAGTTKKLLIEL 678
[Close]
BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Match: A0A671KC72_9TELE (Structural maintenance of chromosomes flexible hinge domain-containing protein 1-like n=2 Tax=Sinocyclocheilus TaxID=75365 RepID=A0A671KC72_9TELE)

HSP 1 Score: 94.7 bits (234), Expect = 1.740e-16
Identity = 140/573 (24.43%), Postives = 243/573 (42.41%), Query Frame = 1 
Query:    1 KEAAFYIGDAVTVVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVYSKRPGDPVPGIHEDESGLLMALCESEKGQEHFTYMIMRMPYEGSEEDRARVALAKGLRHHPAIMQLVRSLTQTYYFHLHP---EEVCERPKQIDAPPLDMQLSLYKNGKVAKAPEAKGLSKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSLKILPDSPELNVTGRIFYYPYVQGESRPTSQVITVDDSDEDEDRESPRQEGDQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKWRNRIKCMLFFHWDAPISSNKLK---LNFNLQDT---IGGVGDDKKMITPLDPKTPKPEFAKWLAKCHKRFDKETTF-----SERVADTPVDGSEHGARWNKCLYGTGEEVGKGQHVAIRVTMKGRGGKKRDVY-GTVQHFDTLRGAGQTWYAGVGYVSILEDSRPEPLQDVHRL----QIERLELATCRLRDEEFAEKKKELNAHCPDSVELFNGQSLVTNEEPLTWSCTD-EPRSQTKG-LQLYIKSKKGEPVCKLDKLATAADLEVRL 1656
            K+A FYIG +V +++K    P+V  F M ++ F E+ + + E +YTG + +++P D    + E E   L ++   EK +E FT +I+     G +++                    R L  TY++++H     +  E  K      +D+Q+SL     V ++P    +      ++L  V +D+ + ++  + S F+F  +      + +  V G I Y+P++  +         ++D DE+    +    G +        FW  R IP ++ ++   F      K+V +      + L+  NRI  +LF +    +S+NKL    L   L+D+      V + +++   +       EF  WL +CH+RFDK+  F     S    D P    +      + +   G+   KGQ V        +  K   V+ G++ HF          YA  GYV I  +  P+ L D  R+    +I+RL  AT         +K ++  A  PD       Q  VT  E   W+  D  P     G +++ I +KKG+ V +L    T   L + L
Sbjct:  179 KQAVFYIGQSVRMISKPAGSPDVHEFVMSKEDF-ERKEMNREDIYTGFIRNRKPAD-CSHVSESEEQFLQSIVMEEKEKESFTAVIIT----GVQQEHVTYLKDN-------FNLWTRELAHTYHYYIHGVHGNDQRETRKNDHVSNIDIQISL-----VERSPRIPRM------MNLREVDNDMQTLYINSSFSTFEFKAT-----GARDSFVEGLIRYHPFLYDQETYPVDPYALEDEDEECVILNSEARGKR---PVFECFWNGRLIPYTTVSE---FEWCARPKKVGA------VPLECYNRISGVLFANDRFQVSTNKLTFMDLELQLRDSNTIFTRVHNGQELRVNIQR-----EFTNWLKECHERFDKQVMFQGFKGSMTRTDVPTKRQQSPWAIFQAIKWDGKTYKKGQCV--------KSVKTNPVFVGSIVHFLLYGEHEGDVYATGGYVQIALE--PKELYDEVRIIPISKIDRLAAATT------IKKKIEDELAKLPD-------QLRVTWPEGNAWAEDDARPAGTLMGPIKVEILNKKGDSVSRLPVAGTTKKLLIEL 682
[Close]
BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Match: A0A671K8Y3_9TELE (Structural maintenance of chromosomes flexible hinge domain-containing protein 1-like n=6 Tax=Sinocyclocheilus TaxID=75365 RepID=A0A671K8Y3_9TELE)

HSP 1 Score: 94.7 bits (234), Expect = 1.750e-16
Identity = 140/573 (24.43%), Postives = 243/573 (42.41%), Query Frame = 1 
Query:    1 KEAAFYIGDAVTVVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVYSKRPGDPVPGIHEDESGLLMALCESEKGQEHFTYMIMRMPYEGSEEDRARVALAKGLRHHPAIMQLVRSLTQTYYFHLHP---EEVCERPKQIDAPPLDMQLSLYKNGKVAKAPEAKGLSKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSLKILPDSPELNVTGRIFYYPYVQGESRPTSQVITVDDSDEDEDRESPRQEGDQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKWRNRIKCMLFFHWDAPISSNKLK---LNFNLQDT---IGGVGDDKKMITPLDPKTPKPEFAKWLAKCHKRFDKETTF-----SERVADTPVDGSEHGARWNKCLYGTGEEVGKGQHVAIRVTMKGRGGKKRDVY-GTVQHFDTLRGAGQTWYAGVGYVSILEDSRPEPLQDVHRL----QIERLELATCRLRDEEFAEKKKELNAHCPDSVELFNGQSLVTNEEPLTWSCTD-EPRSQTKG-LQLYIKSKKGEPVCKLDKLATAADLEVRL 1656
            K+A FYIG +V +++K    P+V  F M ++ F E+ + + E +YTG + +++P D    + E E   L ++   EK +E FT +I+     G +++                    R L  TY++++H     +  E  K      +D+Q+SL     V ++P    +      ++L  V +D+ + ++  + S F+F  +      + +  V G I Y+P++  +         ++D DE+    +    G +        FW  R IP ++ ++   F      K+V +      + L+  NRI  +LF +    +S+NKL    L   L+D+      V + +++   +       EF  WL +CH+RFDK+  F     S    D P    +      + +   G+   KGQ V        +  K   V+ G++ HF          YA  GYV I  +  P+ L D  R+    +I+RL  AT         +K ++  A  PD       Q  VT  E   W+  D  P     G +++ I +KKG+ V +L    T   L + L
Sbjct:  184 KQAVFYIGQSVRMISKPAGSPDVHEFVMSKEDF-ERKEMNREDIYTGFIRNRKPAD-CSHVSESEEQFLQSIVMEEKEKESFTAVIIT----GVQQEHVTYLKDN-------FNLWTRELAHTYHYYIHGVHGNDQRETRKNDHVSNIDIQISL-----VERSPRIPRM------MNLREVDNDMQTLYINSSFSTFEFKAT-----GARDSFVEGLIRYHPFLYDQETYPVDPYALEDEDEECVILNSEARGKR---PVFECFWNGRLIPYTTVSE---FEWCARPKKVGA------VPLECYNRISGVLFANDRFQVSTNKLTFMDLELQLRDSNTIFTRVHNGQELRVNIQR-----EFTNWLKECHERFDKQVMFQGFKGSMTRTDVPTKRQQSPWAIFQAIKWDGKTYKKGQCV--------KSVKTNPVFVGSIVHFLLYGEHEGDVYATGGYVQIALE--PKELYDEVRIIPISKIDRLAAATT------IKKKIEDELAKLPD-------QLRVTWPEGNAWAEDDARPAGTLMGPIKVEILNKKGDSVSRLPVAGTTKKLLIEL 687
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BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Match: A0A7J6B3I3_AMEME (SMC hinge domain-containing protein n=4 Tax=Ictaluridae TaxID=7996 RepID=A0A7J6B3I3_AMEME)

HSP 1 Score: 93.2 bits (230), Expect = 5.380e-16
Identity = 118/468 (25.21%), Postives = 206/468 (44.02%), Query Frame = 1 
Query:    1 KEAAFYIGDAVTVVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVYSKRPGDPVPGIHEDESGLLMALCESEKGQEHFTYMIMRMPYEGSEEDRARVALAKGLRHHPAIMQLVRSLTQTYYFHLHP---EEVCERPKQIDAPPLDMQLSLYKNGKVAKAPEAKGLSKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSLKILPDSPELNVTGRIFYYPYVQG-ESRPTSQVITVDDSDEDEDRESPRQEGDQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKWRNRIKCMLFFHWDAPISSNKLK---LNFNLQ--DTIGGVGDDKKMITPLDPKTP-KPEFAKWLAKCHKRFDKETTF------SERVADTPVDGSEHGARWNKCLYGTGEEVGKGQHVAIRVTMKGRGGKKRDVYGTVQHFDTLRGAGQTWYAGVGYVSILEDSR 1356
            K+A FYIG +V +++K    P+V  F M ++ F++K K++ E +Y G++ +++P D    +  DE   L +L + EKG++ FT +++      +      VA  K            R L   Y++++H     ++      +    +D+Q+ L     + ++P    L      ++L  + +D+ + ++  +   F+F  S +      +  V G + Y+P++   E+ P          + DED      EG +        FW  R IP SS ++   F   +  K+V+S      + L+  NRI  +LF +    +S+NKL    L F L+  DTI       +++   + +   K EFA WL +CH++ DK+  F        R    P       AR+ K +   G+    GQ V    TMK        VYGTV+ F          YA  G+V I+ + +
Sbjct:  229 KQAVFYIGQSVRIISKPGGSPDVHEFVMSKEDFEQKEKNNKE-IYCGIIRNRKPADDS-HVRVDEERFLQSLVQEEKGKDSFTTIVI------TAVQPEHVAYLK-----KDFDSWTRELAHIYHYYIHGIYGNDMRGSRTPVTTSNIDIQICL-----IERSPRLPRL------LNLKEIDNDMQTLYINSSVEEFEFKASRE-----RDAKVEGLLRYHPFLYDRETYPEDPCAVKPALESDEDCIVLHAEG-RGKRPIFECFWNGRLIPYSSVDE---FEWCERPKKVSS------VPLECYNRISGVLFTNDHFKVSTNKLTFMDLEFQLREKDTIF-----TRVLNGQEQRVQIKREFANWLKECHEKHDKQVKFLGFQGVMTRPDIQPKRLQSPWARY-KAIVWDGKTYKSGQKVK---TMK----TSPIVYGTVRQFLLYGDHEDDVYATGGHVQIVVEPK 644
[Close]
BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Match: A0A671K946_9TELE (Structural maintenance of chromosomes flexible hinge domain-containing protein 1-like n=1 Tax=Sinocyclocheilus anshuiensis TaxID=1608454 RepID=A0A671K946_9TELE)

HSP 1 Score: 92.0 bits (227), Expect = 1.220e-15
Identity = 143/578 (24.74%), Postives = 246/578 (42.56%), Query Frame = 1 
Query:    1 KEAAFYIGDAVTVVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVYSKRPGDPVPGIHEDESGLLMALCESEKGQEHFTYMIMRMPYEGSEEDRARVALAKGLRHHPAIMQLVRSLTQTYYFHLHP---EEVCERPKQIDAPPLDMQLSLYKNGKVAKAPEAKGLSKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSLKILPDSPELNVTGRIFYYPYVQG-ESRPTSQ----VITVDDSDEDEDRESPRQEGDQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKWRNRIKCMLFFHWDAPISSNKLK---LNFNLQDT---IGGVGDDKKMITPLDPKTPKPEFAKWLAKCHKRFDKETTF-----SERVADTPVDGSEHGARWNKCLYGTGEEVGKGQHVAIRVTMKGRGGKKRDVY-GTVQHFDTLRGAGQTWYAGVGYVSILEDSRPEPLQDVHRL----QIERLELATCRLRDEEFAEKKKELNAHCPDSVELFNGQSLVTNEEPLTWSCTD-EPRSQTKG-LQLYIKSKKGEPVCKLDKLATAADLEVRL 1656
            K+A FYIG +V +++K    P+V  F M ++ F E+ + + E +YTG + +++P D    + E E   L ++   EK +E FT +I+     G +++                    R L  TY++++H     +  E  K      +D+Q+SL     V ++P    +      ++L  V +D+ + ++  + S F+F  +      + +  V G I Y+P++   E+ P       ++    +DEDE+      E  +        FW  R IP ++ ++   F      K+V +      + L+  NRI  +LF +    +S+NKL    L   L+D+      V + +++   +       EF  WL +CH+RFDK+  F     S    D P    +      + +   G+   KGQ V        +  K   V+ G++ HF          YA  GYV I  +  P+ L D  R+    +I+RL  AT         +K ++  A  PD       Q  VT  E   W+  D  P     G +++ I +KKG+ V +L    T   L + L
Sbjct:  184 KQAVFYIGQSVRMISKPAGSPDVHEFVMSKEDF-ERKEMNREDIYTGFIRNRKPAD-CSHVSESEEQFLQSIVMEEKEKESFTAVIIT----GVQQEHVTYLKDN-------FNLWTRELAHTYHYYIHGVHGNDQRETRKNDHVSNIDIQISL-----VERSPRIPRM------MNLREVDNDMQTLYINSSFSTFEFKAT-----GARDSFVEGLIRYHPFLYDQETYPVDPYALGIVNHKLADEDEECVILNSEA-RGKRPVFECFWNGRLIPYTTVSE---FEWCARPKKVGA------VPLECYNRISGVLFANDRFQVSTNKLTFMDLELQLRDSNTIFTRVHNGQELRVNIQR-----EFTNWLKECHERFDKQVMFQGFKGSMTRTDVPTKRQQSPWAIFQAIKWDGKTYKKGQCV--------KSVKTNPVFVGSIVHFLLYGEHEGDVYATGGYVQIALE--PKELYDEVRIIPISKIDRLAAATT------IKKKIEDELAKLPD-------QLRVTWPEGNAWAEDDARPAGTLMGPIKVEILNKKGDSVSRLPVAGTTKKLLIEL 694
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_101.12.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXR4_9PHAE2.820e-1925.05Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0007AC96AB1.050e-1725.35structural maintenance of chromosomes flexible hin... [more]
A0A672NK77_SINGR1.840e-1724.87Structural maintenance of chromosomes flexible hin... [more]
A0A672NKW1_SINGR1.850e-1724.87Structural maintenance of chromosomes flexible hin... [more]
A0A0G2L6F5_DANRE2.460e-1723.24Structural maintenance of chromosomes flexible hin... [more]
A0A671KAI2_9TELE7.420e-1724.52Structural maintenance of chromosomes flexible hin... [more]
A0A671KC72_9TELE1.740e-1624.43Structural maintenance of chromosomes flexible hin... [more]
A0A671K8Y3_9TELE1.750e-1624.43Structural maintenance of chromosomes flexible hin... [more]
A0A7J6B3I3_AMEME5.380e-1625.21SMC hinge domain-containing protein n=4 Tax=Ictalu... [more]
A0A671K946_9TELE1.220e-1524.74Structural maintenance of chromosomes flexible hin... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_101contigC-australica_Contig_101:38671..43114 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog45351.EDO40062
PFAMsHATPase_c_3
Model size1661
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons21
Evalue3.76e-23
EggNOG OGs28J2Q@1|root,2QREW@2759|Eukaryota,38CQ2@33154|Opisthokonta,3BH6M@33208|Metazoa
DescriptionStructural maintenance of chromosomes flexible hinge
Cds size1659
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_101.12.1prot_C-australica_Contig_101.12.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_101 38671..43114 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586744.8748255-CDS-C-australica_Contig_101:38670..387151682586744.8748255-CDS-C-australica_Contig_101:38670..38715Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 38671..38715 -
1682586744.8880343-CDS-C-australica_Contig_101:38836..389021682586744.8880343-CDS-C-australica_Contig_101:38836..38902Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 38837..38902 -
1682586744.8975375-CDS-C-australica_Contig_101:39143..392061682586744.8975375-CDS-C-australica_Contig_101:39143..39206Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 39144..39206 -
1682586744.9113674-CDS-C-australica_Contig_101:39412..395081682586744.9113674-CDS-C-australica_Contig_101:39412..39508Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 39413..39508 -
1682586744.9217708-CDS-C-australica_Contig_101:39593..396691682586744.9217708-CDS-C-australica_Contig_101:39593..39669Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 39594..39669 -
1682586744.9314058-CDS-C-australica_Contig_101:39777..398541682586744.9314058-CDS-C-australica_Contig_101:39777..39854Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 39778..39854 -
1682586744.9425917-CDS-C-australica_Contig_101:40094..402321682586744.9425917-CDS-C-australica_Contig_101:40094..40232Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 40095..40232 -
1682586744.9569826-CDS-C-australica_Contig_101:40328..404091682586744.9569826-CDS-C-australica_Contig_101:40328..40409Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 40329..40409 -
1682586744.9739082-CDS-C-australica_Contig_101:40545..406221682586744.9739082-CDS-C-australica_Contig_101:40545..40622Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 40546..40622 -
1682586744.9846952-CDS-C-australica_Contig_101:40793..408731682586744.9846952-CDS-C-australica_Contig_101:40793..40873Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 40794..40873 -
1682586744.9944828-CDS-C-australica_Contig_101:41123..412631682586744.9944828-CDS-C-australica_Contig_101:41123..41263Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 41124..41263 -
1682586745.0067792-CDS-C-australica_Contig_101:41380..414631682586745.0067792-CDS-C-australica_Contig_101:41380..41463Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 41381..41463 -
1682586745.0226412-CDS-C-australica_Contig_101:41584..416541682586745.0226412-CDS-C-australica_Contig_101:41584..41654Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 41585..41654 -
1682586745.0330253-CDS-C-australica_Contig_101:41797..418401682586745.0330253-CDS-C-australica_Contig_101:41797..41840Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 41798..41840 -
1682586745.0426643-CDS-C-australica_Contig_101:41928..420381682586745.0426643-CDS-C-australica_Contig_101:41928..42038Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 41929..42038 -
1682586745.0539827-CDS-C-australica_Contig_101:42210..422911682586745.0539827-CDS-C-australica_Contig_101:42210..42291Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 42211..42291 -
1682586745.0656273-CDS-C-australica_Contig_101:42377..424821682586745.0656273-CDS-C-australica_Contig_101:42377..42482Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 42378..42482 -
1682586745.079186-CDS-C-australica_Contig_101:42627..426661682586745.079186-CDS-C-australica_Contig_101:42627..42666Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 42628..42666 -
1682586745.0944374-CDS-C-australica_Contig_101:42762..428071682586745.0944374-CDS-C-australica_Contig_101:42762..42807Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 42763..42807 -
1682586745.1044457-CDS-C-australica_Contig_101:42900..429781682586745.1044457-CDS-C-australica_Contig_101:42900..42978Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 42901..42978 -
1682586745.114334-CDS-C-australica_Contig_101:43048..431141682586745.114334-CDS-C-australica_Contig_101:43048..43114Chrysoparadoxa australica CS_1217CDSC-australica_Contig_101 43049..43114 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_101.12.1

>prot_C-australica_Contig_101.12.1 ID=prot_C-australica_Contig_101.12.1|Name=mRNA_C-australica_Contig_101.12.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=553bp
KEAAFYIGDAVTVVTKTKRDPEVRVFTMDEKHFKEKSKSDPERVYTGMVY
SKRPGDPVPGIHEDESGLLMALCESEKGQEHFTYMIMRMPYEGSEEDRAR
VALAKGLRHHPAIMQLVRSLTQTYYFHLHPEEVCERPKQIDAPPLDMQLS
LYKNGKVAKAPEAKGLSKRLFPVHLSSVTDDLTSKFVAKAESRFDFTFSL
KILPDSPELNVTGRIFYYPYVQGESRPTSQVITVDDSDEDEDRESPRQEG
DQDDEAAVSVFWQDRFIPESSCNKLWFFPSMQDQKRVNSAYSQDKIGLKW
RNRIKCMLFFHWDAPISSNKLKLNFNLQDTIGGVGDDKKMITPLDPKTPK
PEFAKWLAKCHKRFDKETTFSERVADTPVDGSEHGARWNKCLYGTGEEVG
KGQHVAIRVTMKGRGGKKRDVYGTVQHFDTLRGAGQTWYAGVGYVSILED
SRPEPLQDVHRLQIERLELATCRLRDEEFAEKKKELNAHCPDSVELFNGQ
SLVTNEEPLTWSCTDEPRSQTKGLQLYIKSKKGEPVCKLDKLATAADLEV
RLV
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mRNA from alignment at C-australica_Contig_101:38671..43114-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_101.12.1 ID=mRNA_C-australica_Contig_101.12.1|Name=mRNA_C-australica_Contig_101.12.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4444bp|location=Sequence derived from alignment at C-australica_Contig_101:38671..43114- (Chrysoparadoxa australica CS_1217)
AAGGAAGCTGCATTCTATATAGGAGATGCAGTTACCGTCGTCACCAAAAC
CAAAAGGGATCCGGAGGTAGGGCCAATGAAATAAATGTCTTGGCTGGTAG
TCACCTTCCTTTTGATTTCTTAATGATTATTTCCAGGTGCGGGTGTTTAC
AATGGATGAAAAGCACTTTAAGGAAAAATCCAAGTCTGATCCAGAGAGGG
TTTACACAGGGATGGTAATGGCTATTCATGACACTCAACCGCTCATCCGG
ATCACTGGCTTGCTTGCTAGTTTGTTTCCCCCTTAGCCCACTCCTCTGCC
TCATCAGGTCTATTCAAAGCGCCCAGGAGACCCTGTGCCAGGCATACATG
AGGTATTCATTAGTAAGCGGGATGCTATGATGGGCTCTTGAACCCGGAGT
GTTGACCTCTTATTTGTCTTACAATTCTGCCCATGTGCCAACAAATAGGA
TGAGAGCGGCCTGCTTATGGCCCTGTGTGAGTCTGAGGTAAGAATTTCTC
CAGTCCTTCTAAGCCAAGCTGACAGAAAAGCAAGTCCTGCATCAATGAAC
TCATTCAGCTGCGTATAGGTCTTCCCACAACTCCCTGGCCATTGCCCCTC
TGACCCTTGCGTACCGTGCTGCCCACGAGCAGAAGGGTCAAGAGCACTTC
ACATACATGATTATGAGAATGCCCTACGAGGGTTCTGAGGAAGACAGGGC
GAGAGTTGCACTTGCCAAGGGCCTCCGCCACCATCCGGTTAGGCTACTGG
ACATGAAGCCTTGCCTCAGCGTTACTGACTACTGAACTTGTGCTCATTAC
CGTGCTCCCACATGTGCTACCAGGCCATCATGCAGCTCGTGAGGTCACTC
ACACAGACATACTACTTTCACCTCCATCCAGAAGAAGTTTGCGAGCGCCC
CAAGGTACATGGCACCCCCCAGTATGACCCCACCATCTCGACTTTAAAGC
TAGCTAACTAGCTAACTAATTAGCGCTTGCTGCTTGCTGCTTGCTGCTCT
TTCCTTCCCCCCCCAACATGAGCTTCCATGACCTCTGGCGTGACCCCATC
CCCTCCCCAATTCTCCCAATTCTCAGCAAATCGACGCACCACCACTTGAC
ATGCAGCTATCGCTGTACAAAAATGGAAAGGTGGCAAAAGCCCCAGAGGC
AAAAGGCCTAAGCAAACGGCTCTTTCCTGTGCACCTGTAAGTGCTGACCC
GGGTCATTAAGCCAAAGCCATAAAAAAAAACAGCCTGCTCTGCTAAACAC
CATCACGCTGGCTCGACGCCTCAGGTCTTCTGTGACGGATGATTTGACCA
GCAAGTTTGTTGCTAAGGTGATTTGAATTGAGCGGGTTGCTCTACGTACT
GATAATGGGATAGTGGAATAGTGAAGTTAGGAAGTGAAGCTGGTTTGGTT
TTGATAGGGGAGGCTCTTGCACTGACAGGCATGGCATGCATGCCCACACT
ACACTCTCAGGCGGAGTCACGCTTCGACTTTACATTTTCACTCAAGATAC
TACCTGATTCGCCGGAGCTGAATGTCACCGGTGCGTGTGTGTTCATGATG
TGACCAAGATCTGTTTGTTGGCCCCTATCCTGGCTCAGCTTCTCACGTGC
ATCACCCCTCACTTTCCCTTATTGAATGCCCTCTGTCCCAACGATATGCA
GGGCGCATCTTCTATTATCCCTATGTTCAGGGGGAGTCACGCCCTACTTC
ACAAGTGATCACAGTGGATGATAGCGACGAGGATGTAAGATGTAACCCGT
GGAAGGGTCGTGCTGAGATAGATCTCCAGCACTTGCACAGGCAGGCAGGC
GCATCAAGCTCATCCCTTTCATCCCCCTTTTGCCCTGCTGTTCCAACTTA
GGAGGATAGGGAAAGTCCCCGCCAAGAAGGAGACCAGGATGATGAAGCTG
CCGTGAGTGTCTTCTGGCAAGACAGGTTTATCCCTGAAAGCTCCTGCAAT
AAGCTGTGGTTCTTCCCGTCCATGCAGGACCAGAAGCGAGTGTAAGTACT
TGTCGATGTATAATGAGGGGAAACATAATCCACTGATGCATTGTTTATTA
GCTGGTGGGGTGCTGTGTCTTATTGTGGGCTGTTAGCTGTAGTGTGTGTG
TCAGTGGGAGAGGGTAGGCCTGGGCTCCTGGGCTTACACACACACACACA
CATATAGATAGCTAGATAGGGTTGGGTGAACGAGGAAGGTAAAACAACCA
ATAACAATAAATGACCCACTGCGTGCATCCAACATCTACAGGAATAGTGC
CTATAGCCAAGATAAAATCGGTCTGAAGTGGAGGAATCGTATTAAGTGTA
TGCTCTTCTTCCACTGGGATGGTGAGTCAGCGCAGGTGCCTGTGCCTCGT
TTTCTTTTTAAAACTCTACCAGTGTGACTGACTAAAGAAGCATTTCATTT
ATAGCAGAAGACATGCTGATTCTGGGCCCTCAACCTCCTTTGCCTCCCCT
AACACTTCCCTTGACTGCCTATCTGCCTGCCTCCCTTTCAAGCTCCAATA
AGCAGCAATAAGTTAAAACTCAATTTTAACTTACAAGACACGATTGGTGG
AGTTGGGGATGACAAGAAGGTAGGTCCGCGCAGACTACATTGGCTCAACA
CAGCCTCTCACGCCAGCATCTTGCATGATCCATCAGACCTTCTTAAGGCT
GTCTAAGAGCACTCTCACACCTCGCGCTTCCTTCCTTCCTTCCTTCTCAC
TCCAGATGATAACACCATTGGACCCGAAGACCCCCAAGCCCGAATTTGCC
AAGTGGCTCGCTAAATGCCACAAGAGGTTTGACAAGGTGGGCTATTCTTT
TTTTTTCCAGGAATTTTCCCAAGAAACCCAGCCTTTTGGATGCCAACCTT
GTCCTTGCCCCTCTCCTGTTCCTCGCCCCCAGGAAACCACCTTCTCTGAG
CGTGTTGCCGACACACCCGTGGATGGGAGTGAGCATGGTGCTAGGTGGAA
CAAGTGCCTGTACGGAACAGGCGAAGAGGTCGGGAAGGGGCAGCATGTAG
CAATTAGGGTCACCATGAAGGTGAGGAAGCAATGAGAGTAATGAGAGTAG
TGAGAGCATCTCTCACCAAGAGCTCAGTTGGAGTGGCTCAGGGGTGCAGG
TGGTTGGTTTAGCTGTTAGTTTGGTGGTTAGTTTGGTTTGGTGGTTGTTT
TCGTAGTTGCTTTGCTCAACCAGTAATGTTTGCCATCACTTTTAGAATTA
CCTCGTGCATGTAACCTCAGCAATTTCTGTGGACCGCTTCTTCATGCATG
CCATGAGCAGGGCAGGGGCGGTAAGAAGAGGGATGTGTACGGTACTGTCC
AGCACTTTGACACGCTGCGTGGAGCTGGCCAGACATGGTAAGTGGCGTGG
TGTGTGGAGGGTGGCTTAGAAGCCCTGGGCACTTCATCTGTAACGTGCTC
TCCCTCATCTCATCTCACCTCACCACCCGTTGGATCTTCCCTCAGGTATG
CTGGTGTTGGTTACGTGTCTATTCTGGAGGACTCTAGGCCAGAGCCTTTG
CAGGATGTGCATAGATTGCAGGTAAGACTGGCGCCTCTTTGCTCTTCACT
CTTTAACTCTTGGCTCTTAGCTTAAGAAGCATATCATCTCTTTTCCCCTC
CCCTAGATTGAGCGCCTTGAGCTGGCTACATGCAGGCTAAGAGATGAGGA
GTTTGCGGAGAAGAAAAAGGAGTTAAATGCGCATTGTCCCGATTCTGTAG
AGGTGAGTTGGAGAAAGTCTGGGAGCAGCAGTGACAGATAATAGAATTGC
ATAGAATAGAACAGAGAGCTTTTCGATTGTGTTCCCTGCTATCAGGCGCA
CTCCAGCACCTTATGGATGCCACTGGCGCTGCCACTTGAGCGCTTAGCAT
TGTGGAATCTTCCACACATCCTTACCTCTCCACTCTTTCTTTGTTATTTG
CCACGCAGCTTTTCAATGGGCAATCTCTTGTGACCAATGAGGAACCGCTG
ACTTGGTCCTGTACTGATGAGGTACGTCAAGGCATACGGTCTTAGTCTAA
CTTATTATCACAGAGTTGGAATGTGTGATAATAGGAGCAAGGCATGGTCC
TTGGTCTCCTCTCTGTTGAGCCAGCACTGGCAGAATGCCGCAATGTTGTG
GTTGTTGTTGCCACCCATGTACCGCACCGTTCACGCATGCACGCTCTCTC
TCTCACACGCACACACACGCAACCTGCATGCGATGCTGAATCATCATCTG
CACCCGTGACAGCCAAGGAGCCAAACGAAAGGCCTACAGCTCTATATCAA
GTCAAAGAAGGGCGAGCCCGTGTGCAAGGTAAGCAACTGACTGATAACTG
ATGCAGATGAGGAGGAGCTGCTTCTGCACCGTTGTCTCACAGTCACCGTA
AAGTTGACACTTGATTCATCCTGCCTCCTTGATTTTGTGTGCTTGCCAGT
TGGACAAACTGGCAACAGCTGCCGACTTGGAGGTGAGGCTTGTG
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Coding sequence (CDS) from alignment at C-australica_Contig_101:38671..43114-

>mRNA_C-australica_Contig_101.12.1 ID=mRNA_C-australica_Contig_101.12.1|Name=mRNA_C-australica_Contig_101.12.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1659bp|location=Sequence derived from alignment at C-australica_Contig_101:38671..43114- (Chrysoparadoxa australica CS_1217)
AAGGAAGCTGCATTCTATATAGGAGATGCAGTTACCGTCGTCACCAAAAC
CAAAAGGGATCCGGAGGTGCGGGTGTTTACAATGGATGAAAAGCACTTTA
AGGAAAAATCCAAGTCTGATCCAGAGAGGGTTTACACAGGGATGGTCTAT
TCAAAGCGCCCAGGAGACCCTGTGCCAGGCATACATGAGGATGAGAGCGG
CCTGCTTATGGCCCTGTGTGAGTCTGAGAAGGGTCAAGAGCACTTCACAT
ACATGATTATGAGAATGCCCTACGAGGGTTCTGAGGAAGACAGGGCGAGA
GTTGCACTTGCCAAGGGCCTCCGCCACCATCCGGCCATCATGCAGCTCGT
GAGGTCACTCACACAGACATACTACTTTCACCTCCATCCAGAAGAAGTTT
GCGAGCGCCCCAAGCAAATCGACGCACCACCACTTGACATGCAGCTATCG
CTGTACAAAAATGGAAAGGTGGCAAAAGCCCCAGAGGCAAAAGGCCTAAG
CAAACGGCTCTTTCCTGTGCACCTGTCTTCTGTGACGGATGATTTGACCA
GCAAGTTTGTTGCTAAGGCGGAGTCACGCTTCGACTTTACATTTTCACTC
AAGATACTACCTGATTCGCCGGAGCTGAATGTCACCGGGCGCATCTTCTA
TTATCCCTATGTTCAGGGGGAGTCACGCCCTACTTCACAAGTGATCACAG
TGGATGATAGCGACGAGGATGAGGATAGGGAAAGTCCCCGCCAAGAAGGA
GACCAGGATGATGAAGCTGCCGTGAGTGTCTTCTGGCAAGACAGGTTTAT
CCCTGAAAGCTCCTGCAATAAGCTGTGGTTCTTCCCGTCCATGCAGGACC
AGAAGCGAGTGAATAGTGCCTATAGCCAAGATAAAATCGGTCTGAAGTGG
AGGAATCGTATTAAGTGTATGCTCTTCTTCCACTGGGATGCTCCAATAAG
CAGCAATAAGTTAAAACTCAATTTTAACTTACAAGACACGATTGGTGGAG
TTGGGGATGACAAGAAGATGATAACACCATTGGACCCGAAGACCCCCAAG
CCCGAATTTGCCAAGTGGCTCGCTAAATGCCACAAGAGGTTTGACAAGGA
AACCACCTTCTCTGAGCGTGTTGCCGACACACCCGTGGATGGGAGTGAGC
ATGGTGCTAGGTGGAACAAGTGCCTGTACGGAACAGGCGAAGAGGTCGGG
AAGGGGCAGCATGTAGCAATTAGGGTCACCATGAAGGGCAGGGGCGGTAA
GAAGAGGGATGTGTACGGTACTGTCCAGCACTTTGACACGCTGCGTGGAG
CTGGCCAGACATGGTATGCTGGTGTTGGTTACGTGTCTATTCTGGAGGAC
TCTAGGCCAGAGCCTTTGCAGGATGTGCATAGATTGCAGATTGAGCGCCT
TGAGCTGGCTACATGCAGGCTAAGAGATGAGGAGTTTGCGGAGAAGAAAA
AGGAGTTAAATGCGCATTGTCCCGATTCTGTAGAGCTTTTCAATGGGCAA
TCTCTTGTGACCAATGAGGAACCGCTGACTTGGTCCTGTACTGATGAGCC
AAGGAGCCAAACGAAAGGCCTACAGCTCTATATCAAGTCAAAGAAGGGCG
AGCCCGTGTGCAAGTTGGACAAACTGGCAACAGCTGCCGACTTGGAGGTG
AGGCTTGTG
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