mRNA_C-australica_Contig_10076.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Match: A0A222E8F2_9RHOB (Guanine deaminase n=5 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222E8F2_9RHOB)

HSP 1 Score: 270 bits (690), Expect = 3.280e-91
Identity = 135/137 (98.54%), Postives = 136/137 (99.27%), Query Frame = 1

Query:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGHAVAD 411
            MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNL+TVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECG AVAD
Sbjct:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLETVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGLAVAD 137

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BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Match: A0A5B8BYN5_9RHOB (Nucleoside deaminase n=2 Tax=Rhodobacterales TaxID=204455 RepID=A0A5B8BYN5_9RHOB)

HSP 1 Score: 257 bits (656), Expect = 5.000e-86
Identity = 126/137 (91.97%), Postives = 131/137 (95.62%), Query Frame = 1

Query:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGHAVAD 411
            MYNETFLRRAI IS +AL TPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNL+TVDLRGC LYSSCEPCALCVAAMNIAGI ALY+AADMAQAGDAIADLPEAARFPVDV+RLTHECGHAV +
Sbjct:    1 MYNETFLRRAIAISAEALKTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLETVDLRGCQLYSSCEPCALCVAAMNIAGITALYYAADMAQAGDAIADLPEAARFPVDVDRLTHECGHAVTE 137

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BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Match: A0A285IJ95_9RHOB (tRNA(Arg) A34 adenosine deaminase TadA n=1 Tax=Pseudooceanicola antarcticus TaxID=1247613 RepID=A0A285IJ95_9RHOB)

HSP 1 Score: 252 bits (644), Expect = 3.370e-84
Identity = 121/137 (88.32%), Postives = 130/137 (94.89%), Query Frame = 1

Query:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGHAVAD 411
            MYNE+F+RRAIEIS +ALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNL+TVDLRGC+LYSSCEPCALCVAAMNIAGIAALY+AAD AQAGD + DLPE  RFP+DV RLTHECGHAVA+
Sbjct:    1 MYNESFMRRAIEISAEALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLETVDLRGCELYSSCEPCALCVAAMNIAGIAALYYAADKAQAGDVLGDLPETVRFPIDVGRLTHECGHAVAE 137

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BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Match: UPI000EF55472 (nucleoside deaminase n=1 Tax=Tropicibacter sp. LMIT003 TaxID=2267683 RepID=UPI000EF55472)

HSP 1 Score: 249 bits (637), Expect = 3.930e-83
Identity = 121/137 (88.32%), Postives = 129/137 (94.16%), Query Frame = 1

Query:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGHAVAD 411
            MY+ETFLRRAIEIS QA++ PGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNL T+DLRGC LYSSCEPCALCVAAMNIAGIA LY+AADM QAGDA+ DLPEAARFPVDV+RLTHECGHAV +
Sbjct:    1 MYDETFLRRAIEISAQAVEIPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLGTIDLRGCVLYSSCEPCALCVAAMNIAGIATLYYAADMVQAGDALGDLPEAARFPVDVDRLTHECGHAVTE 137

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BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Match: UPI001C0A209D (nucleoside deaminase n=1 Tax=Celeribacter halophilus TaxID=576117 RepID=UPI001C0A209D)

HSP 1 Score: 249 bits (636), Expect = 5.590e-83
Identity = 122/137 (89.05%), Postives = 131/137 (95.62%), Query Frame = 1

Query:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGHAVAD 411
            MY E FLRRAIEIS QA+DTPGTEPFGAVIVKDG+IVGEGINRSVMNHDPTSHGETEAIRDACR+L+TV+LRG +LYSSCEPCALCVAAMNIAGI ALY+AADMAQAGDAI DLPEAARFPVDV+RLTHECGHAVA+
Sbjct:    1 MYEERFLRRAIEISAQAIDTPGTEPFGAVIVKDGQIVGEGINRSVMNHDPTSHGETEAIRDACRSLETVNLRGSELYSSCEPCALCVAAMNIAGITALYYAADMAQAGDAITDLPEAARFPVDVDRLTHECGHAVAE 137

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BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Match: A0A7W9EWE9_9RHOB (tRNA(Arg) A34 adenosine deaminase TadA n=1 Tax=Loktanella ponticola TaxID=1524255 RepID=A0A7W9EWE9_9RHOB)

HSP 1 Score: 249 bits (635), Expect = 8.210e-83
Identity = 123/135 (91.11%), Postives = 128/135 (94.81%), Query Frame = 1

Query:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGHAV 405
            MYNE+FLRRAIEIS  A+ TPGTEPFGAVIVKDG+IVGEGINRSVMNHDPTSHGETEAIRDACRNL TVDLRGC LYSSCEPCALCVAAMNIAGIAALY+AADM QAGDAIADLPEAARFPVDV+ LTHECGHAV
Sbjct:    1 MYNESFLRRAIEISATAITTPGTEPFGAVIVKDGQIVGEGINRSVMNHDPTSHGETEAIRDACRNLGTVDLRGCALYSSCEPCALCVAAMNIAGIAALYYAADMGQAGDAIADLPEAARFPVDVDLLTHECGHAV 135

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BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Match: A0A1Z8T2R5_9PROT (tRNA-specific adenosine deaminase n=1 Tax=Candidatus Endolissoclinum sp. TMED37 TaxID=1986638 RepID=A0A1Z8T2R5_9PROT)

HSP 1 Score: 247 bits (631), Expect = 3.230e-82
Identity = 120/137 (87.59%), Postives = 130/137 (94.89%), Query Frame = 1

Query:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGHAVAD 411
            MYNETFLRRAIEIS +AL T GTEPFGA+IVKDGKIVGEGINRS+MNHDPTSHGETEAIRDACRNL+TVDLRGC+LYSSCEPCALCVAAMNIAGI ALY+AADMAQAG AIA+LPEAARFPVDV+RLTHECG  V++
Sbjct:    1 MYNETFLRRAIEISAEALSTAGTEPFGAIIVKDGKIVGEGINRSLMNHDPTSHGETEAIRDACRNLETVDLRGCELYSSCEPCALCVAAMNIAGITALYYAADMAQAGSAIANLPEAARFPVDVDRLTHECGRTVSE 137

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BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Match: A0A5C4S810_9RHOB (Nucleoside deaminase n=1 Tax=Phaeobacter sp. B1627 TaxID=2583809 RepID=A0A5C4S810_9RHOB)

HSP 1 Score: 247 bits (631), Expect = 3.570e-82
Identity = 122/137 (89.05%), Postives = 130/137 (94.89%), Query Frame = 1

Query:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGHAVAD 411
            MYNETFLRRAIEIS +ALDTPGTEPFGAVIVK+GKIVGEGINRSVMNHDPTSHGETEAIRDACRNL+TVDLRG +LYSSCEPCALCVAAMNIAGI ALY+AADMAQAG A+A LPEAARFPVDV+RLTHECG  VA+
Sbjct:    1 MYNETFLRRAIEISAEALDTPGTEPFGAVIVKNGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLETVDLRGSELYSSCEPCALCVAAMNIAGITALYYAADMAQAGGALAHLPEAARFPVDVDRLTHECGRPVAE 137

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BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Match: UPI000EB1F42C (nucleoside deaminase n=1 Tax=Chachezhania antarctica TaxID=2340860 RepID=UPI000EB1F42C)

HSP 1 Score: 246 bits (628), Expect = 9.260e-82
Identity = 121/137 (88.32%), Postives = 126/137 (91.97%), Query Frame = 1

Query:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGHAVAD 411
            MY ETFLRRAIEIS QALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNL TVDLRG +LYSSCEPCALCVAAMNIAGIAALY+AADM QAG  I+DLPE  RFP+DV+RLTHECG AV D
Sbjct:    1 MYEETFLRRAIEISAQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLGTVDLRGAELYSSCEPCALCVAAMNIAGIAALYYAADMGQAGATISDLPETGRFPIDVDRLTHECGRAVGD 137

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BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Match: UPI001FD04281 (nucleoside deaminase n=1 Tax=Phaeobacter sp. J2-8 TaxID=2931394 RepID=UPI001FD04281)

HSP 1 Score: 246 bits (627), Expect = 1.310e-81
Identity = 119/135 (88.15%), Postives = 129/135 (95.56%), Query Frame = 1

Query:    1 MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDPTSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYFAADMAQAGDAIADLPEAARFPVDVERLTHECGHAV 405
            MYNETF+RRAIEIS +AL+TPGTEPFGAVIVKDGKIVGEGIN+S++NHDPTSHGETEAIRDACRNL+TVDLRGC+LYSSCEPCALCVAAMNIAGIAALY+AADM QAG AI DLPEAARFPVDV+RL HECGH V
Sbjct:    1 MYNETFMRRAIEISAEALNTPGTEPFGAVIVKDGKIVGEGINQSLINHDPTSHGETEAIRDACRNLETVDLRGCELYSSCEPCALCVAAMNIAGIAALYYAADMDQAGAAIGDLPEAARFPVDVDRLIHECGHGV 135

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_10076.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
A0A222E8F2_9RHOB	3.280e-91	98.54	Guanine deaminase n=5 Tax=Roseobacteraceae TaxID=2...	[more]
A0A5B8BYN5_9RHOB	5.000e-86	91.97	Nucleoside deaminase n=2 Tax=Rhodobacterales TaxID...	[more]
A0A285IJ95_9RHOB	3.370e-84	88.32	tRNA(Arg) A34 adenosine deaminase TadA n=1 Tax=Pse...	[more]
UPI000EF55472	3.930e-83	88.32	nucleoside deaminase n=1 Tax=Tropicibacter sp. LMI...	[more]
UPI001C0A209D	5.590e-83	89.05	nucleoside deaminase n=1 Tax=Celeribacter halophil...	[more]
A0A7W9EWE9_9RHOB	8.210e-83	91.11	tRNA(Arg) A34 adenosine deaminase TadA n=1 Tax=Lok...	[more]
A0A1Z8T2R5_9PROT	3.230e-82	87.59	tRNA-specific adenosine deaminase n=1 Tax=Candidat...	[more]
A0A5C4S810_9RHOB	3.570e-82	89.05	Nucleoside deaminase n=1 Tax=Phaeobacter sp. B1627...	[more]
UPI000EB1F42C	9.260e-82	88.32	nucleoside deaminase n=1 Tax=Chachezhania antarcti...	[more]
UPI001FD04281	1.310e-81	88.15	nucleoside deaminase n=1 Tax=Phaeobacter sp. J2-8 ...	[more]

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Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-australica_Contig_10076:429..839+
coding sequence from alignment at C-australica_Contig_10076:429..839+

protein sequence of mRNA_C-australica_Contig_10076.1.1

>prot_C-australica_Contig_10076.1.1 ID=prot_C-australica_Contig_10076.1.1|Name=mRNA_C-australica_Contig_10076.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=137bp
MYNETFLRRAIEISTQALDTPGTEPFGAVIVKDGKIVGEGINRSVMNHDP
TSHGETEAIRDACRNLKTVDLRGCDLYSSCEPCALCVAAMNIAGIAALYF
AADMAQAGDAIADLPEAARFPVDVERLTHECGHAVAD

mRNA from alignment at C-australica_Contig_10076:429..839+

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-australica_Contig_10076.1.1 ID=mRNA_C-australica_Contig_10076.1.1|Name=mRNA_C-australica_Contig_10076.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=411bp|location=Sequence derived from alignment at C-australica_Contig_10076:429..839+ (Chrysoparadoxa australica CS_1217)
ATGTACAATGAAACCTTCCTGCGCCGCGCCATCGAGATTTCGACACAGGC
GCTCGACACCCCGGGCACCGAACCCTTCGGTGCGGTGATCGTCAAGGACG
GCAAGATCGTCGGCGAGGGGATCAACCGTTCGGTGATGAACCACGACCCG
ACCTCGCATGGCGAAACCGAAGCGATCCGCGACGCCTGTCGCAACCTTAA
AACGGTCGACCTGCGTGGCTGTGACCTGTACTCCAGTTGCGAGCCCTGCG
CGCTCTGCGTGGCGGCCATGAACATCGCCGGGATTGCTGCGCTGTATTTT
GCCGCCGACATGGCGCAGGCCGGTGACGCCATTGCCGATCTGCCCGAGGC
CGCCCGCTTTCCGGTGGATGTCGAACGATTGACTCACGAATGCGGACACG
CGGTTGCGGAC

Coding sequence (CDS) from alignment at C-australica_Contig_10076:429..839+

>mRNA_C-australica_Contig_10076.1.1 ID=mRNA_C-australica_Contig_10076.1.1|Name=mRNA_C-australica_Contig_10076.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=411bp|location=Sequence derived from alignment at C-australica_Contig_10076:429..839+ (Chrysoparadoxa australica CS_1217)
ATGTACAATGAAACCTTCCTGCGCCGCGCCATCGAGATTTCGACACAGGC
GCTCGACACCCCGGGCACCGAACCCTTCGGTGCGGTGATCGTCAAGGACG
GCAAGATCGTCGGCGAGGGGATCAACCGTTCGGTGATGAACCACGACCCG
ACCTCGCATGGCGAAACCGAAGCGATCCGCGACGCCTGTCGCAACCTTAA
AACGGTCGACCTGCGTGGCTGTGACCTGTACTCCAGTTGCGAGCCCTGCG
CGCTCTGCGTGGCGGCCATGAACATCGCCGGGATTGCTGCGCTGTATTTT
GCCGCCGACATGGCGCAGGCCGGTGACGCCATTGCCGATCTGCCCGAGGC
CGCCCGCTTTCCGGTGGATGTCGAACGATTGACTCACGAATGCGGACACG
CGGTTGCGGAC