mRNA_C-australica_Contig_10068.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Match: A0A2E5SP25_9GAMM (AMP nucleosidase n=1 Tax=Marinobacter sp. TaxID=50741 RepID=A0A2E5SP25_9GAMM) HSP 1 Score: 509 bits (1311), Expect = 4.030e-179 Identity = 250/260 (96.15%), Postives = 251/260 (96.54%), Query Frame = 1 Query: 1 MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIIYSHSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHEEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 780 MQE TINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMES ADFDVRLVPQPRGLKLELINAP HA VDG MLRAIREHLFSVLRDIIYS+SIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGH EYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGR IGITEPGI GAEAPNP VNELVIMPDIEKRLEAFVRCGHGVIVFPGG Sbjct: 1 MQEMTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESXADFDVRLVPQPRGLKLELINAPAHAXVDGXMLRAIREHLFSVLRDIIYSYSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHXEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRXIGITEPGIXGAEAPNPXVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 260
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Match: A0A142FSE9_9GAMM (AMP nucleosidase n=62 Tax=Marinobacteraceae TaxID=2887365 RepID=A0A142FSE9_9GAMM) HSP 1 Score: 509 bits (1310), Expect = 5.730e-179 Identity = 244/260 (93.85%), Postives = 252/260 (96.92%), Query Frame = 1 Query: 1 MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIIYSHSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHEEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 780 M E T+NALVSPEGSLEILSNHEVNRLKD+SEGGLYRLFRQCALAVLNTG+ETDDCK LME+HADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDI+YSHSIP T AGFRRD+PED+TN VFHILRNARVLQAGRQPDLVVCWGGHSI H+EYQYSKDVGHQLGLR LSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG Sbjct: 1 MTEPTMNALVSPEGSLEILSNHEVNRLKDKSEGGLYRLFRQCALAVLNTGVETDDCKELMEAHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIVYSHSIPNTVAGFRRDNPEDITNLVFHILRNARVLQAGRQPDLVVCWGGHSISHDEYQYSKDVGHQLGLRGLSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 260
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Match: R8B308_9GAMM (AMP nucleosidase n=22 Tax=Marinobacteraceae TaxID=2887365 RepID=R8B308_9GAMM) HSP 1 Score: 499 bits (1284), Expect = 5.140e-175 Identity = 238/260 (91.54%), Postives = 253/260 (97.31%), Query Frame = 1 Query: 1 MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIIYSHSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHEEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 780 M ETTINALVSPEGSLEILSNHEVNRLKD+SEGGLYRLFRQCALAVLNTG+ETDDCK+LME+HADFDVRLVPQPRGLKLEL+NAP HAFVDG MLRAIREHLFSVLRDIIYS+SIP++A+GFRRDDP+D+TN +FHILRNARVLQAGRQPDLVVCWGGHSI +EYQYSK+VGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIG+TEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVR GHGVIVFPGG Sbjct: 1 MTETTINALVSPEGSLEILSNHEVNRLKDKSEGGLYRLFRQCALAVLNTGVETDDCKSLMEAHADFDVRLVPQPRGLKLELVNAPAHAFVDGSMLRAIREHLFSVLRDIIYSYSIPESASGFRRDDPQDITNLIFHILRNARVLQAGRQPDLVVCWGGHSINQQEYQYSKEVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGLTEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRTGHGVIVFPGG 260
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Match: UPI001CC0C110 (nucleotide 5'-monophosphate nucleosidase PpnN n=1 Tax=Marinobacter sp. F4216 TaxID=2874281 RepID=UPI001CC0C110) HSP 1 Score: 494 bits (1273), Expect = 2.420e-173 Identity = 237/260 (91.15%), Postives = 251/260 (96.54%), Query Frame = 1 Query: 1 MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIIYSHSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHEEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 780 M+E TINALVSPEGSLEILS+HEVNRLKDRSEGGLYRLFRQCALAVLNTG+ETDDCKALMESHADFDVRLVPQPRGLKLELINAP HAFVDGEMLRAIREHLFSVLRDI+Y +S+P+TA+GFRRD+PED+TN VFHILRNARVL+ GRQPDLVVCWGGHSIGHEEYQYSK+VGHQLGLR LSI TGCGPGAMKGPMKGATI HAKQR+KNGRY+GITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVR GHGVIVFPGG Sbjct: 1 MREPTINALVSPEGSLEILSSHEVNRLKDRSEGGLYRLFRQCALAVLNTGVETDDCKALMESHADFDVRLVPQPRGLKLELINAPAHAFVDGEMLRAIREHLFSVLRDIVYLYSLPETASGFRRDNPEDITNLVFHILRNARVLEPGRQPDLVVCWGGHSIGHEEYQYSKEVGHQLGLRGLSIITGCGPGAMKGPMKGATIAHAKQRIKNGRYVGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRSGHGVIVFPGG 260
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Match: A0A5B0V9R4_9GAMM (AMP nucleosidase n=1 Tax=Marinobacter salinexigens TaxID=2919747 RepID=A0A5B0V9R4_9GAMM) HSP 1 Score: 487 bits (1253), Expect = 2.650e-170 Identity = 234/260 (90.00%), Postives = 248/260 (95.38%), Query Frame = 1 Query: 1 MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIIYSHSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHEEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 780 MQE T NALVSPEGSLEILSN+EV+RLKDRSEGGLYRLFRQCALAVLNTG+ETDDCK LMESHADFDVRLVPQPRGLKLEL+NAP HAFVDGEMLRAIREHLFSVLRDIIYS++IPQ+ +GFRRD+ EDLTN VFHILRNA VL+AGRQPDLVVCWGGHSI H EYQYSK++GHQLGLR LSI TGCGPGAMKGPMKGATIGHAKQRVKNGRYIG+TEPGIIGAEAPNPIVNELVIMPDIEKRLEAF+RCGHGVIVFPGG Sbjct: 1 MQEPTTNALVSPEGSLEILSNYEVSRLKDRSEGGLYRLFRQCALAVLNTGVETDDCKTLMESHADFDVRLVPQPRGLKLELVNAPAHAFVDGEMLRAIREHLFSVLRDIIYSNTIPQSLSGFRRDNSEDLTNLVFHILRNAGVLEAGRQPDLVVCWGGHSISHAEYQYSKEIGHQLGLRGLSIITGCGPGAMKGPMKGATIGHAKQRVKNGRYIGMTEPGIIGAEAPNPIVNELVIMPDIEKRLEAFIRCGHGVIVFPGG 260
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Match: A0A7Y8SLR9_9ALTE (AMP nucleosidase n=4 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7Y8SLR9_9ALTE) HSP 1 Score: 487 bits (1253), Expect = 2.650e-170 Identity = 233/260 (89.62%), Postives = 248/260 (95.38%), Query Frame = 1 Query: 1 MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIIYSHSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHEEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 780 M E INALVSPEGSLEILS HEVNRLKDRSEGGLYRLFRQCALAVLNTG+E+DDCK+LME+HADFDVRLVPQPRGLKLELINAPGHAFVDGE+LRA+REHLFSVLRDI+Y+HSIPQT AGFR D+PED+TN VFHILRNARVL+ GRQPD+VVCWGGHSIG EEYQYSK+VGHQLGLR LSI TGCGPGAMKGPMKGATIGHAKQRV+NGRY+GITEP IIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG Sbjct: 1 MTEPKINALVSPEGSLEILSAHEVNRLKDRSEGGLYRLFRQCALAVLNTGVESDDCKSLMEAHADFDVRLVPQPRGLKLELINAPGHAFVDGELLRAMREHLFSVLRDIVYTHSIPQTIAGFRGDNPEDITNLVFHILRNARVLEPGRQPDMVVCWGGHSIGQEEYQYSKEVGHQLGLRNLSIITGCGPGAMKGPMKGATIGHAKQRVRNGRYVGITEPAIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 260
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Match: UPI00140DAC28 (nucleotide 5'-monophosphate nucleosidase PpnN n=2 Tax=Marinobacter TaxID=2742 RepID=UPI00140DAC28) HSP 1 Score: 486 bits (1252), Expect = 3.900e-170 Identity = 234/260 (90.00%), Postives = 244/260 (93.85%), Query Frame = 1 Query: 1 MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIIYSHSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHEEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 780 M + TINALVSPEGSLEILSNHEVNRLKDRSEGGLY+LFRQCALAVLNTG+ETDDCK LME H DFDVRLVPQPRGLKLELINAP AFVDGEMLRAIREHLFSVLRDIIYSHSIP +AAGF R DPED+TN +FHILRNARVLQAGRQPD+VVCWGGHSI EEY YSKDVGH+LGLR LSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIG+TEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVR GHG+IVFPGG Sbjct: 1 MNQATINALVSPEGSLEILSNHEVNRLKDRSEGGLYKLFRQCALAVLNTGVETDDCKDLMEVHMDFDVRLVPQPRGLKLELINAPASAFVDGEMLRAIREHLFSVLRDIIYSHSIPTSAAGFNRQDPEDITNLIFHILRNARVLQAGRQPDMVVCWGGHSISREEYVYSKDVGHELGLRGLSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGLTEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRAGHGIIVFPGG 260
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Match: UPI001E6371E3 (nucleotide 5'-monophosphate nucleosidase PpnN n=1 Tax=Marinobacter TaxID=2742 RepID=UPI001E6371E3) HSP 1 Score: 486 bits (1250), Expect = 7.580e-170 Identity = 235/260 (90.38%), Postives = 244/260 (93.85%), Query Frame = 1 Query: 1 MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIIYSHSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHEEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 780 M E TINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTG+E DDCK+LME HADFD+RLVPQPRGLKLELINAP AFVDG+MLRA REHLFSVLRDI+YSHSIP +AAGFRRDDPED+TN +FHILRNARVLQAGRQPDLVVCWGGHSI EEY YSKDVGHQLGLR LSI TGCGPGAMKGPMKGATIGHAKQRVK+GRYIGITEP IIGAEAPNPIVNELVIMPDIEKRLEAFVR GHGVIVFPGG Sbjct: 1 MSEPTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGVEADDCKSLMEQHADFDIRLVPQPRGLKLELINAPASAFVDGDMLRANREHLFSVLRDIVYSHSIPSSAAGFRRDDPEDITNLIFHILRNARVLQAGRQPDLVVCWGGHSINREEYTYSKDVGHQLGLRGLSIVTGCGPGAMKGPMKGATIGHAKQRVKDGRYIGITEPAIIGAEAPNPIVNELVIMPDIEKRLEAFVRAGHGVIVFPGG 260
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Match: A0A4P6WDC4_9GAMM (AMP nucleosidase n=30 Tax=Marinobacter TaxID=2742 RepID=A0A4P6WDC4_9GAMM) HSP 1 Score: 483 bits (1244), Expect = 6.190e-169 Identity = 230/260 (88.46%), Postives = 245/260 (94.23%), Query Frame = 1 Query: 1 MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIIYSHSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHEEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 780 M E+T+NALVSPEGSLEILS+HEV RLKD+SEGGLYRLFRQCALAVLNTG+ETDDCK LME+HADFDV LVPQPRGLKLEL+NAP HAFVDGEMLRA REHLFSVLRDI+YSHS+P GFR+D+PEDLTN VFHILRNARVL+AGRQPD+VVCWGGHSI H EYQYSK+VGHQLGLR LSICTGCGPGAMKGPMKGATIGHAKQR+KNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVR GHGVIVFPGG Sbjct: 1 MTESTMNALVSPEGSLEILSSHEVARLKDKSEGGLYRLFRQCALAVLNTGVETDDCKELMETHADFDVHLVPQPRGLKLELVNAPAHAFVDGEMLRANREHLFSVLRDIVYSHSLPNFVEGFRKDNPEDLTNLVFHILRNARVLEAGRQPDIVVCWGGHSISHNEYQYSKEVGHQLGLRGLSICTGCGPGAMKGPMKGATIGHAKQRIKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRAGHGVIVFPGG 260
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Match: UPI00124454C9 (nucleotide 5'-monophosphate nucleosidase PpnN n=1 Tax=Marinobacter halotolerans TaxID=1569211 RepID=UPI00124454C9) HSP 1 Score: 480 bits (1235), Expect = 1.440e-167 Identity = 230/260 (88.46%), Postives = 248/260 (95.38%), Query Frame = 1 Query: 1 MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGIETDDCKALMESHADFDVRLVPQPRGLKLELINAPGHAFVDGEMLRAIREHLFSVLRDIIYSHSIPQTAAGFRRDDPEDLTNYVFHILRNARVLQAGRQPDLVVCWGGHSIGHEEYQYSKDVGHQLGLRALSICTGCGPGAMKGPMKGATIGHAKQRVKNGRYIGITEPGIIGAEAPNPIVNELVIMPDIEKRLEAFVRCGHGVIVFPGG 780 M +TINALVSPEGSLEILS EVNRLKD+SEGGLY+LFRQCALAVLNTG+ETDDCK+LME+HADFDVRLVPQPRGLKLELINAP HAFVDGEMLRA+REHLFSVLRDIIYS+SIPQ+AAGF+RD+PE +TN VFHILRNARVLQAGR+PDLVVCWGGHSI EYQYSK+VGHQLGLR LSICTGCGPGAMKGPMKGATIGHAKQRVK+GRYIG+TEPGIIGAEAPNPIVNELVI+PDIEKRLEAF+R GHGVIVFPGG Sbjct: 1 MSASTINALVSPEGSLEILSTFEVNRLKDKSEGGLYQLFRQCALAVLNTGVETDDCKSLMEAHADFDVRLVPQPRGLKLELINAPAHAFVDGEMLRAMREHLFSVLRDIIYSYSIPQSAAGFKRDEPEGITNLVFHILRNARVLQAGRRPDLVVCWGGHSINEREYQYSKEVGHQLGLRGLSICTGCGPGAMKGPMKGATIGHAKQRVKDGRYIGLTEPGIIGAEAPNPIVNELVILPDIEKRLEAFLRAGHGVIVFPGG 260 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_10068.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_10068.1.1 >prot_C-australica_Contig_10068.1.1 ID=prot_C-australica_Contig_10068.1.1|Name=mRNA_C-australica_Contig_10068.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=260bp MQETTINALVSPEGSLEILSNHEVNRLKDRSEGGLYRLFRQCALAVLNTGback to top mRNA from alignment at C-australica_Contig_10068:62..841+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_10068.1.1 ID=mRNA_C-australica_Contig_10068.1.1|Name=mRNA_C-australica_Contig_10068.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=780bp|location=Sequence derived from alignment at C-australica_Contig_10068:62..841+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_10068:62..841+ >mRNA_C-australica_Contig_10068.1.1 ID=mRNA_C-australica_Contig_10068.1.1|Name=mRNA_C-australica_Contig_10068.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=780bp|location=Sequence derived from alignment at C-australica_Contig_10068:62..841+ (Chrysoparadoxa australica CS_1217)back to top |