mRNA_C-australica_Contig_10061.1.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Match: A0A2E6WYF2_9RHOB (IS1595 family transposase n=1 Tax=Sulfitobacter sp. TaxID=1903071 RepID=A0A2E6WYF2_9RHOB)

HSP 1 Score: 483 bits (1243), Expect = 1.790e-170
Identity = 233/277 (84.12%), Postives = 249/277 (89.89%), Query Frame = 1

Query:    1 CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLAMLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFSEKTAFSGIIEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGASGYASVAASRSIEHVVVGSKPGSRVRADCYHIQNVNSLHARYSEFINPCCGPATKNLSGDIMWLEARVAGLRPADVIR 831
            C SCGIEHR+KWGRTRTGIQRYRCRGCGKT+SGRT S IGRIHRPDLF+A+LRDMLGT APQSVRKLAE+LGLNKYTVWRWRMLVFSIID  E TAFSGIIEADETHQRESRKGSREWVRHFADPQNVP PPRPRWEDFTT+GLKMMRGLSKWQLPILTVADRGGAR+FQRLPNRQSA+L  A+KPLLPPDA+LCSDGA GYA  AA+  IEH VVG+KPG+RV A CYHIQNVNSLHARY  FI P CGPATKNL+G I WLE R+ G+ PA VIR
Sbjct:   51 CPSCGIEHRQKWGRTRTGIQRYRCRGCGKTFSGRTASVIGRIHRPDLFMAVLRDMLGTAAPQSVRKLAERLGLNKYTVWRWRMLVFSIIDRGETTAFSGIIEADETHQRESRKGSREWVRHFADPQNVPPPPRPRWEDFTTKGLKMMRGLSKWQLPILTVADRGGARMFQRLPNRQSATLECAIKPLLPPDAVLCSDGARGYAITAANSGIEHFVVGNKPGTRVTAGCYHIQNVNSLHARYDTFIKPFCGPATKNLNGYIRWLEVRLTGMVPAHVIR 327

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BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Match: A0A1Y5RQ05_9RHOB (ISXO2-like transposase domain protein n=1 Tax=Palleronia marisminoris TaxID=315423 RepID=A0A1Y5RQ05_9RHOB)

HSP 1 Score: 451 bits (1161), Expect = 5.460e-158
Identity = 219/278 (78.78%), Postives = 240/278 (86.33%), Query Frame = 1

Query:    1 CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLAMLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFSEKTAFSGIIEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGASGYASVAASRSIEHVVVGSKPGSRVRADCYHIQNVNSLHARYSEFINPCCGPATKNLSGDIMWLEARVAGLRPADVIRA 834
            C  CG + R+KWGRTRT +QRYRC GC KTYSGRTGSAIGRIHRPDLF+  LRDMLGT AP+SVRKL+ QLGLNKYT+WRWRMLVFSII     T FSGI+EADET+QRESRKGSREWVRHFADP+ V  PPRPRWED+TTQGLKMM GLS+WQLPILTVADRGGARLFQRLPNR+SA+L RAMKPL+P DA+LCSDGA GY  VAA+  IEH VVGSKPG+RV A CYHIQNVNSLHARY EFI P  GPATKNL+G I WLE R+AG+RPADVIRA
Sbjct:   51 CPFCGDDRRQKWGRTRTKVQRYRCSGCQKTYSGRTGSAIGRIHRPDLFMVALRDMLGTSAPKSVRKLSRQLGLNKYTIWRWRMLVFSIIGDGGTTRFSGIVEADETYQRESRKGSREWVRHFADPKKVAPPPRPRWEDYTTQGLKMMPGLSRWQLPILTVADRGGARLFQRLPNRKSATLKRAMKPLVPGDAVLCSDGADGYKKVAATGGIEHFVVGSKPGTRVAAGCYHIQNVNSLHARYGEFIKPFRGPATKNLNGYIRWLEVRLAGVRPADVIRA 328

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BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Match: A0A254QNW0_9RHOB (DDE_Tnp_IS1595 domain-containing protein n=5 Tax=Rhodobacterales TaxID=204455 RepID=A0A254QNW0_9RHOB)

HSP 1 Score: 449 bits (1155), Expect = 4.470e-157
Identity = 215/278 (77.34%), Postives = 238/278 (85.61%), Query Frame = 1

Query:    1 CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLAMLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFSEKTAFSGIIEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGASGYASVAASRSIEHVVVGSKPGSRVRADCYHIQNVNSLHARYSEFINPCCGPATKNLSGDIMWLEARVAGLRPADVIRA 834
            C  CG E R+KWGRTRT +QRYRC GC KTYSGRTGSAIGR+HRPDLFL  LRDMLG  APQSVRKLA QLGLNKYTVWRWRMLVFS+I  S   +FSGIIEADET QRESRKGSREWVRHFADP+ V  PPRPRWEDFTT+GLKMMRGLSKWQLPILTVADRGGARLF+RLPNR+S +L RAMKPL+P DA+LCSDGA+GY  VAA+  +EH VVGSK G+RV + CYHIQNVNSLH RY  FI P CGPATKN+SG I WLE R+AG+RPA+++RA
Sbjct:   51 CPYCGDERRQKWGRTRTKVQRYRCTGCQKTYSGRTGSAIGRLHRPDLFLVALRDMLGDAAPQSVRKLARQLGLNKYTVWRWRMLVFSVIGSSSTVSFSGIIEADETFQRESRKGSREWVRHFADPKKVAPPPRPRWEDFTTKGLKMMRGLSKWQLPILTVADRGGARLFRRLPNRKSVTLERAMKPLVPSDAVLCSDGANGYKKVAAAGGLEHFVVGSKAGTRVASGCYHIQNVNSLHTRYKSFIKPFCGPATKNISGYIRWLEVRLAGMRPAEIVRA 328

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BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Match: UPI001AE01B1F (IS1595 family transposase n=1 Tax=Sagittula salina TaxID=2820268 RepID=UPI001AE01B1F)

HSP 1 Score: 446 bits (1147), Expect = 7.640e-156
Identity = 215/279 (77.06%), Postives = 243/279 (87.10%), Query Frame = 1

Query:    1 CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLAMLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFSEKTA-FSGIIEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGASGYASVAASRSIEHVVVGSKPGSRVRADCYHIQNVNSLHARYSEFINPCCGPATKNLSGDIMWLEARVAGLRPADVIRA 834
            C  CG + R+KWGRTRT IQRYRC GC KTYSGRTGSAIGRIHRPDLF+  LRDMLG+PAPQSVRKLA+QL LNKYT+WRWRM+VFSII+ S   A FSGIIEADET+QRESRKGSREWVR+FA+ QNVP PPRPRWED+TTQGLKMMRGLSKWQLPILTVADRGG+RLF+RLP+R+SA++ RAM PL+P DA+LCSDG +GY  +AA R +EH VVGSKPG+RV A CYHIQNVNSLHARY  FI P CGPATKNL+G I WLE R+AG+ PAD+IRA
Sbjct:   51 CPFCGDDRRQKWGRTRTKIQRYRCSGCKKTYSGRTGSAIGRIHRPDLFMEALRDMLGSPAPQSVRKLAKQLDLNKYTIWRWRMVVFSIIESSSVAASFSGIIEADETYQRESRKGSREWVRYFANTQNVPKPPRPRWEDYTTQGLKMMRGLSKWQLPILTVADRGGSRLFRRLPDRKSATVERAMSPLVPGDAVLCSDGGNGYKDLAAVRGLEHFVVGSKPGTRVAAGCYHIQNVNSLHARYDRFIKPFCGPATKNLNGYIRWLEVRLAGMAPADIIRA 329

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BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Match: A0A165PVI0_9RHOB (DDE_Tnp_IS1595 domain-containing protein n=2 Tax=Sulfitobacter TaxID=60136 RepID=A0A165PVI0_9RHOB)

HSP 1 Score: 443 bits (1140), Expect = 9.540e-155
Identity = 216/279 (77.42%), Postives = 241/279 (86.38%), Query Frame = 1

Query:    1 CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLAMLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFSEKTA-FSGIIEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGASGYASVAASRSIEHVVVGSKPGSRVRADCYHIQNVNSLHARYSEFINPCCGPATKNLSGDIMWLEARVAGLRPADVIRA 834
            C  CG E R+K GRTRT IQRYRC GC K YSGRTGSAIGRIHRPDLF+  LRDMLGT APQSVRKLA +LGLNKYTVWRWR+LVFSII  S  +A FSGIIEADET+QRESRKGSREWVRHFADPQNVP PPRPRWEDFTTQGLKMMRGLS WQLPILTVADRGG+RLF+RLPNR+SA++ RAMKPL+P DA+LCSDG +GY ++AA+R +EH VVGSKPG RV + CYHIQNVNSLHA Y  FI P CGPA+KNLSG I WLE R+ G+RPA+++RA
Sbjct:   53 CPFCGDERRQKLGRTRTKIQRYRCTGCQKAYSGRTGSAIGRIHRPDLFMVALRDMLGTSAPQSVRKLARRLGLNKYTVWRWRILVFSIIGSSISSASFSGIIEADETYQRESRKGSREWVRHFADPQNVPRPPRPRWEDFTTQGLKMMRGLSSWQLPILTVADRGGSRLFRRLPNRKSATVERAMKPLVPDDAVLCSDGGTGYRNLAAARQLEHFVVGSKPGKRVASGCYHIQNVNSLHACYKRFIKPFCGPASKNLSGYIRWLEVRLEGIRPAELVRA 331

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BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Match: UPI001C5D177B (IS1595 family transposase n=1 Tax=Sulfitobacter sp. CW3 TaxID=2861965 RepID=UPI001C5D177B)

HSP 1 Score: 436 bits (1122), Expect = 4.700e-152
Identity = 211/277 (76.17%), Postives = 236/277 (85.20%), Query Frame = 1

Query:    1 CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLAMLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFSEKTAFSGIIEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGASGYASVAASRSIEHVVVGSKPGSRVRADCYHIQNVNSLHARYSEFINPCCGPATKNLSGDIMWLEARVAGLRPADVIR 831
            C  C  E R+KWGRTRT +QRYRC GC KTYSGRTGS IGRIHRPDLF+ +LR+MLG  APQSVRKLA QL LNKYTVWRWRMLVFSII     T FSGIIEADET+QRESRKGSREWVRHFADP+ V  PPRPRWEDFTTQGLKMMRGLS+WQLPILTVADRGGARLF+RLPNR+  +L  AMKPL+P DA+LCSD A+GY ++AA+  +EH VVGSKPG+RV +DCYHIQNVNSLHARY  FI P CGPATKNL+G I WLE R+AG+RPA+V+R
Sbjct:   51 CPFCCDERRQKWGRTRTKVQRYRCSGCQKTYSGRTGSVIGRIHRPDLFMVVLRNMLGPHAPQSVRKLARQLKLNKYTVWRWRMLVFSIIGHGTVTGFSGIIEADETYQRESRKGSREWVRHFADPKKVAPPPRPRWEDFTTQGLKMMRGLSRWQLPILTVADRGGARLFRRLPNRRGVTLEHAMKPLVPRDAMLCSDVANGYKNLAAAGGLEHYVVGSKPGTRVASDCYHIQNVNSLHARYKMFIKPFCGPATKNLNGYIRWLEIRLAGVRPAEVVR 327

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BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Match: A0A085U138_9RHOB (DDE_Tnp_IS1595 domain-containing protein n=4 Tax=Thioclava TaxID=285107 RepID=A0A085U138_9RHOB)

HSP 1 Score: 433 bits (1114), Expect = 8.320e-151
Identity = 210/277 (75.81%), Postives = 236/277 (85.20%), Query Frame = 1

Query:    1 CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLAMLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFSEKTAFSGIIEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGASGYASVAASRSIEHVVVGSKPGSRVRADCYHIQNVNSLHARYSEFINPCCGPATKNLSGDIMWLEARVAGLRPADVIR 831
            C  CG E R+KWGRTRT IQRYRC GC KTYSGRTGSA+G IHRPDLF+ +LRDML    P SVRKLA++LGLNKYTVWRWRMLVFSII+     AFSGIIEADET+QRESRKGSREWVRH ADP NVP+PPRPRWEDFT+QGLKMMRGLS+WQLPILTVADRGGA+LFQRL N   A+L  AM PL+P DA+LCSDGA+GY+ +A++  IEHVV+GSKPG+RV A CYHIQNVNSLHARY +FI P CGPA+KNL+G I WLE R+AG RPADVIR
Sbjct:   53 CPFCGEERRQKWGRTRTKIQRYRCGGCQKTYSGRTGSAVGHIHRPDLFMVVLRDMLIGSTPLSVRKLAKKLGLNKYTVWRWRMLVFSIIENRVTPAFSGIIEADETYQRESRKGSREWVRHAADPLNVPAPPRPRWEDFTSQGLKMMRGLSRWQLPILTVADRGGAKLFQRLANHAGATLQDAMTPLVPRDAVLCSDGAAGYSKIASAGGIEHVVLGSKPGTRVAAGCYHIQNVNSLHARYKKFIKPFCGPASKNLNGYIRWLELRLAGARPADVIR 329

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BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Match: UPI00067C7D7C (IS1595 family transposase n=1 Tax=Pseudorhodobacter aquimaris TaxID=687412 RepID=UPI00067C7D7C)

HSP 1 Score: 431 bits (1107), Expect = 2.510e-150
Identity = 211/279 (75.63%), Postives = 232/279 (83.15%), Query Frame = 1

Query:    1 CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLAMLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFS-EKTAFSGIIEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGASGYASVAASRSIEHVVVGSKPGSRVRADCYHIQNVNSLHARYSEFINPCCGPATKNLSGDIMWLEARVAGLRPADVIRA 834
            C  CG +  +KWGRTRT IQRYRC GC KTYSGRTGSAIGRIHRPDLF+  LRDMLGT  PQSVRKLA QLGLNKYTVWRWRMLVFSII  S   T+FS IIEADET+QRES+K SREWV HF DPQNV  PPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGA LFQRLPNR+  S+ RAMKPL+P DA+ CSDG +GY  +AA+  IEH VVG KPG RV + CYHIQNVNSLHARY +FI P CGPATKNL+G I WLEAR+AG+ PA++ R+
Sbjct:   14 CPLCGDKRHQKWGRTRTKIQRYRCTGCQKTYSGRTGSAIGRIHRPDLFMVALRDMLGTSTPQSVRKLARQLGLNKYTVWRWRMLVFSIIGSSISSTSFSRIIEADETYQRESQKRSREWVHHFTDPQNVALPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGAYLFQRLPNRKGISVERAMKPLVPGDAVPCSDGGNGYKDLAAAGGIEHFVVGRKPGKRVVSGCYHIQNVNSLHARYKKFIKPFCGPATKNLNGYISWLEARLAGMEPAEIFRS 292

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BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Match: A0A0J5QA22_9RHOB (Transposase n=1 Tax=Puniceibacterium sp. IMCC21224 TaxID=1618204 RepID=A0A0J5QA22_9RHOB)

HSP 1 Score: 418 bits (1074), Expect = 9.440e-145
Identity = 201/276 (72.83%), Postives = 227/276 (82.25%), Query Frame = 1

Query:    1 CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLAMLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFSEKTAFSGIIEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGASGYASVAASRSIEHVVVGSKPGSRVRADCYHIQNVNSLHARYSEFINPCCGPATKNLSGDIMWLEARVAGLRPADVI 828
            C  C    R+KWGRTRT +QRYRC GC KTYSGRTG AIG IHRPDLF+ +L DMLGT   QSVR LA QL LNKYT+WRWRMLVFSII    +  FSGIIEADET+QRESRKGSREWVRHFADPQN   PPRPRW DFTTQGLKMMRGLS+WQLPILTVADRGGARLF+RLPNR+ A++ RAM PL+P DA+LCSD  +GY ++AA+R +EH VVGSKPG+RV A CYH QNVNSLHARY  FI P CGPATKNL+G I WLE R+ G++PA++I
Sbjct:   51 CPLCHDNQRQKWGRTRTNVQRYRCSGCKKTYSGRTGRAIGLIHRPDLFMVVLWDMLGTSVLQSVRALAHQLRLNKYTIWRWRMLVFSIIGSGTEMDFSGIIEADETYQRESRKGSREWVRHFADPQNFSQPPRPRWGDFTTQGLKMMRGLSRWQLPILTVADRGGARLFRRLPNRKGATVERAMNPLVPGDAVLCSDRGNGYKNLAAARGLEHFVVGSKPGTRVAAGCYHNQNVNSLHARYGSFIKPFCGPATKNLNGYIRWLEVRMEGMQPAEII 326

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BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Match: UPI00135907EF (IS1595 family transposase n=1 Tax=Profundibacterium mesophilum TaxID=1258573 RepID=UPI00135907EF)

HSP 1 Score: 416 bits (1069), Expect = 1.230e-144
Identity = 201/232 (86.64%), Postives = 214/232 (92.24%), Query Frame = 1

Query:    1 CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLAMLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFSEKTAFSGIIEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGASGYASVAASRSIEHVVVGSKPGSRVRADCYHIQ 696
            C SCGIEHR+KWG+TRTGIQRYRCRGCGKTYSGRTGS +GRIHRPDLF+ +LRDMLGT APQSVRKLA QLGLNKYTVWRWRMLVFSIID  E TAFSGIIEADETHQRESRKGSREWVRHFAD QNVP PPRPRWEDFTTQGLKMMRGLSKWQLPILTVADR GARLFQRLP+RQSA+L RA+KPLLP DA+LCSDGASGYA+VAA+  IEH +VGSKPG+RV A CYHIQ
Sbjct:   42 CPSCGIEHRQKWGKTRTGIQRYRCRGCGKTYSGRTGSVVGRIHRPDLFMVVLRDMLGTSAPQSVRKLAGQLGLNKYTVWRWRMLVFSIIDRGEDTAFSGIIEADETHQRESRKGSREWVRHFADRQNVPQPPRPRWEDFTTQGLKMMRGLSKWQLPILTVADRSGARLFQRLPDRQSATLERALKPLLPQDAVLCSDGASGYATVAANGGIEHFLVGSKPGTRVTAGCYHIQ 273

The following BLAST results are available for this feature:

BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot

BLAST of mRNA_C-australica_Contig_10061.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
A0A2E6WYF2_9RHOB	1.790e-170	84.12	IS1595 family transposase n=1 Tax=Sulfitobacter sp...	[more]
A0A1Y5RQ05_9RHOB	5.460e-158	78.78	ISXO2-like transposase domain protein n=1 Tax=Pall...	[more]
A0A254QNW0_9RHOB	4.470e-157	77.34	DDE_Tnp_IS1595 domain-containing protein n=5 Tax=R...	[more]
UPI001AE01B1F	7.640e-156	77.06	IS1595 family transposase n=1 Tax=Sagittula salina...	[more]
A0A165PVI0_9RHOB	9.540e-155	77.42	DDE_Tnp_IS1595 domain-containing protein n=2 Tax=S...	[more]
UPI001C5D177B	4.700e-152	76.17	IS1595 family transposase n=1 Tax=Sulfitobacter sp...	[more]
A0A085U138_9RHOB	8.320e-151	75.81	DDE_Tnp_IS1595 domain-containing protein n=4 Tax=T...	[more]
UPI00067C7D7C	2.510e-150	75.63	IS1595 family transposase n=1 Tax=Pseudorhodobacte...	[more]
A0A0J5QA22_9RHOB	9.440e-145	72.83	Transposase n=1 Tax=Puniceibacterium sp. IMCC21224...	[more]
UPI00135907EF	1.230e-144	86.64	IS1595 family transposase n=1 Tax=Profundibacteriu...	[more]

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Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at C-australica_Contig_10061:9..842-
coding sequence from alignment at C-australica_Contig_10061:9..842-

protein sequence of mRNA_C-australica_Contig_10061.1.1

>prot_C-australica_Contig_10061.1.1 ID=prot_C-australica_Contig_10061.1.1|Name=mRNA_C-australica_Contig_10061.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=278bp
CASCGIEHREKWGRTRTGIQRYRCRGCGKTYSGRTGSAIGRIHRPDLFLA
MLRDMLGTPAPQSVRKLAEQLGLNKYTVWRWRMLVFSIIDFSEKTAFSGI
IEADETHQRESRKGSREWVRHFADPQNVPSPPRPRWEDFTTQGLKMMRGL
SKWQLPILTVADRGGARLFQRLPNRQSASLMRAMKPLLPPDAILCSDGAS
GYASVAASRSIEHVVVGSKPGSRVRADCYHIQNVNSLHARYSEFINPCCG
PATKNLSGDIMWLEARVAGLRPADVIRA

mRNA from alignment at C-australica_Contig_10061:9..842-

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_C-australica_Contig_10061.1.1 ID=mRNA_C-australica_Contig_10061.1.1|Name=mRNA_C-australica_Contig_10061.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=834bp|location=Sequence derived from alignment at C-australica_Contig_10061:9..842- (Chrysoparadoxa australica CS_1217)
TGTGCGTCTTGTGGTATCGAACATCGGGAGAAGTGGGGAAGAACGCGCAC
CGGCATTCAACGCTACCGGTGCCGAGGGTGCGGGAAAACCTATTCGGGCC
GGACTGGCTCAGCCATAGGCCGCATCCACCGACCTGACTTGTTCCTCGCT
ATGCTCCGGGACATGCTCGGCACTCCCGCGCCGCAGTCGGTGCGGAAGCT
TGCGGAACAGCTTGGGCTCAACAAATACACGGTTTGGCGCTGGCGGATGC
TGGTATTCTCGATCATCGATTTCAGTGAGAAGACAGCGTTCTCCGGGATC
ATCGAGGCCGATGAAACCCACCAACGGGAATCTCGCAAGGGGTCTCGTGA
ATGGGTTCGGCACTTCGCCGATCCGCAGAATGTCCCCTCGCCTCCACGTC
CGAGGTGGGAGGATTTCACCACCCAGGGATTGAAGATGATGCGGGGCCTC
TCGAAGTGGCAGCTCCCCATTCTCACCGTCGCTGATCGGGGCGGGGCGAG
GCTGTTTCAGCGCCTTCCGAACCGCCAAAGCGCGTCTCTGATGCGTGCTA
TGAAGCCCCTCCTGCCGCCGGATGCCATTCTCTGCTCGGATGGCGCCAGC
GGTTATGCGTCAGTCGCAGCAAGTCGCAGCATTGAACACGTCGTGGTTGG
CTCCAAACCAGGATCGCGCGTCAGAGCCGACTGCTATCACATCCAAAACG
TGAATTCGCTTCATGCGCGCTACTCCGAGTTCATCAACCCGTGCTGTGGG
CCGGCTACTAAGAACCTAAGCGGCGACATAATGTGGCTGGAGGCTCGCGT
GGCCGGGTTGAGACCTGCCGACGTCATTCGAGCT

Coding sequence (CDS) from alignment at C-australica_Contig_10061:9..842-

>mRNA_C-australica_Contig_10061.1.1 ID=mRNA_C-australica_Contig_10061.1.1|Name=mRNA_C-australica_Contig_10061.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=834bp|location=Sequence derived from alignment at C-australica_Contig_10061:9..842- (Chrysoparadoxa australica CS_1217)
TGTGCGTCTTGTGGTATCGAACATCGGGAGAAGTGGGGAAGAACGCGCAC
CGGCATTCAACGCTACCGGTGCCGAGGGTGCGGGAAAACCTATTCGGGCC
GGACTGGCTCAGCCATAGGCCGCATCCACCGACCTGACTTGTTCCTCGCT
ATGCTCCGGGACATGCTCGGCACTCCCGCGCCGCAGTCGGTGCGGAAGCT
TGCGGAACAGCTTGGGCTCAACAAATACACGGTTTGGCGCTGGCGGATGC
TGGTATTCTCGATCATCGATTTCAGTGAGAAGACAGCGTTCTCCGGGATC
ATCGAGGCCGATGAAACCCACCAACGGGAATCTCGCAAGGGGTCTCGTGA
ATGGGTTCGGCACTTCGCCGATCCGCAGAATGTCCCCTCGCCTCCACGTC
CGAGGTGGGAGGATTTCACCACCCAGGGATTGAAGATGATGCGGGGCCTC
TCGAAGTGGCAGCTCCCCATTCTCACCGTCGCTGATCGGGGCGGGGCGAG
GCTGTTTCAGCGCCTTCCGAACCGCCAAAGCGCGTCTCTGATGCGTGCTA
TGAAGCCCCTCCTGCCGCCGGATGCCATTCTCTGCTCGGATGGCGCCAGC
GGTTATGCGTCAGTCGCAGCAAGTCGCAGCATTGAACACGTCGTGGTTGG
CTCCAAACCAGGATCGCGCGTCAGAGCCGACTGCTATCACATCCAAAACG
TGAATTCGCTTCATGCGCGCTACTCCGAGTTCATCAACCCGTGCTGTGGG
CCGGCTACTAAGAACCTAAGCGGCGACATAATGTGGCTGGAGGCTCGCGT
GGCCGGGTTGAGACCTGCCGACGTCATTCGAGCT