Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 213 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Exons | 2 |
| Cds size | 108 |
Relationships
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586739.712137-UTR-C-australica_Contig_1006:5711..5719 | 1682586739.712137-UTR-C-australica_Contig_1006:5711..5719 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1006 5712..5719 - |
| 1682586739.7412837-UTR-C-australica_Contig_1006:5892..5989 | 1682586739.7412837-UTR-C-australica_Contig_1006:5892..5989 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1006 5893..5989 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586739.723179-CDS-C-australica_Contig_1006:5719..5768 | 1682586739.723179-CDS-C-australica_Contig_1006:5719..5768 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1006 5720..5768 - |
| 1682586739.732429-CDS-C-australica_Contig_1006:5833..5892 | 1682586739.732429-CDS-C-australica_Contig_1006:5833..5892 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1006 5834..5892 - |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1006.4.1 >prot_C-australica_Contig_1006.4.1 ID=prot_C-australica_Contig_1006.4.1|Name=mRNA_C-australica_Contig_1006.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=36bp
MKGIVPEKERERKRGIEEQRFVKCGGDHVVLASTE* back to topmRNA from alignment at C-australica_Contig_1006:5712..5989- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1006.4.1 ID=mRNA_C-australica_Contig_1006.4.1|Name=mRNA_C-australica_Contig_1006.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=278bp|location=Sequence derived from alignment at C-australica_Contig_1006:5712..5989- (Chrysoparadoxa australica CS_1217)
TATAGATGCAGGTCATCAGGGTGCCTGAGATGCAGATGTACAAAGAAGTA
TAAAGAGGAAGGAGAGAGAGAAAGCGGCATCAGATGATCTTTGTTCAATG
AAGGGTATTGTGCCAGAGAAGGAGAGAGAGAGAAAGAGAGGAATTGAGGA
GCAAAGGTACACCACTGTCCTCGCTAACATCTTCAAGTTCATGGCTCAGA
TTTCTTTGTATGCGTCACCAGGTTTGTTAAGTGTGGTGGTGATCATGTGG
TATTAGCAAGCACAGAGTAGATAGCTGG back to topCoding sequence (CDS) from alignment at C-australica_Contig_1006:5712..5989- >mRNA_C-australica_Contig_1006.4.1 ID=mRNA_C-australica_Contig_1006.4.1|Name=mRNA_C-australica_Contig_1006.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=108bp|location=Sequence derived from alignment at C-australica_Contig_1006:5712..5989- (Chrysoparadoxa australica CS_1217)
ATGAAGGGTATTGTGCCAGAGAAGGAGAGAGAGAGAAAGAGAGGAATTGA
GGAGCAAAGGTTTGTTAAGTGTGGTGGTGATCATGTGGTATTAGCAAGCA
CAGAGTAG back to top
|