mRNA_C-australica_Contig_1006.3.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
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Overview
Homology
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Match: A0A7S2E8Y4_TRICV (Glutamine-dependent NAD(+) synthetase n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2E8Y4_TRICV) HSP 1 Score: 202 bits (515), Expect = 5.520e-54 Identity = 118/213 (55.40%), Postives = 145/213 (68.08%), Query Frame = -3 Query: 1458 QLLPWVRGTMAQGYLLVLGSANVDEALRGYMTKYDCSSADLNPIGAI-KVDLKRLLSWAATEYDYDVLSEIVAAPPTAELRP-QESKPPKTVLSTAKRMKMIWG*HTKN*APLGG*GRMTCVDRS---ACSRSLYMCGKNRA*ELLQRR*GCFFHFYGINRHKLTTLTPSYHAEQYSPDDNRFDLRQFLY-PRWTRQFRDIDTLV-ADSKKQQ 2075
QLLPWVRG +G+LLVLGSANVDE LRGYMTKYDCSSADLNPIGAI K DLKR+L WA+ EY Y VLSEI +APPTAELRP +S+ + + + M M + A LG GR+ + R + + L + N + + + FF +Y NRHK+ T+TP+YHAE YSPDDNRFDLRQFLY RWTRQF ID LV +DS +++
Sbjct: 239 QLLPWVRGR--RGFLLVLGSANVDEGLRGYMTKYDCSSADLNPIGAISKGDLKRMLQWASEEYGYTVLSEIGSAPPTAELRPITDSEQEEHTQTDEEDMGMTY-------AELGLYGRLRKISRCGPVSMFKKLCVTWSNLSPSEVAEKVKRFFFYYSANRHKMCTVTPAYHAEAYSPDDNRFDLRQFLYNTRWTRQFSVIDALVESDSNRKE 442
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Match: A0A7S1U1N7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U1N7_9STRA) HSP 1 Score: 196 bits (499), Expect = 1.380e-52 Identity = 104/220 (47.27%), Postives = 139/220 (63.18%), Query Frame = 1 Query: 649 HWFERSRVSKINPLRSLLLDPTINNIPPAKTHTELVERLRTQNIPHPSFDVDGDGVVSQEDYAMAKRFDLDGNGQLDEAEAQVGRRIMAERFFMRHPDDLHLYGGSYSQQSLADNINQLAKSKSFKKTMSELLEREQHHHTTGSDSVKQCMTLQDSKLTRHNFFADKMNTTAWNDFTRDPRHPTWLASKHHSGSRHQLEFMRKAEARERAQELLNLSWGP 1308
+ F R + S NPLR+ LLDP +NN+ + ++ EL ER + NIPH S+D+DGDG VSQED +AKRFDLDGNG LD E +VG+RI+AE FF RH +D+HLYG Y +S+ +N+ LA++ +F KTM+ L E+ + GS VK C+TL D K RH ++ DK + TAWND+ PR L S SGSR L +RK R+R +L P
Sbjct: 132 NMFSRPKPSTKNPLRTALLDPEVNNLIQSGSYHELAERRKMLNIPHASYDIDGDGFVSQEDLFLAKRFDLDGNGVLDPDEREVGKRILAEEFFNRHAEDIHLYGDEYEGKSVKENVKALARNVNFFKTMTNLHNMEKTFNERGSMQVKDCLTLSDPKQLRHTWYTDKFDATAWNDYGAAPRRAA-LKSMQQSGSREHLFSLRKIADRDRCAAMLKRKTKP 350
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Match: A0A7S3Y6T4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6T4_HETAK) HSP 1 Score: 197 bits (501), Expect = 1.780e-52 Identity = 117/216 (54.17%), Postives = 142/216 (65.74%), Query Frame = -3 Query: 1464 IEQLLPWVRGTMAQGYLLVLGSANVDEALRGYMTKYDCSSADLNPIGAI-KVDLKRLLSWAATEYDYDVLSEIVAAPPTAELRPQ-ESKPPKTVLSTAKRMKMIWG*HTKN*APLGG*GRMTCVDRS---ACSRSLYMCGKNR-A*ELLQRR*GCFFHFYGINRHKLTTLTPSYHAEQYSPDDNRFDLRQFLY-PRWTRQFRDIDTLVA---DSKK 2081
+ QL PWVRG G+LLVLGSANVDE LRGYMTKYDCSSADLNPIG+I K+DLKRLL+WAA + + L+E+ APPTAELRP + + + M M + A LG GR+ + R + R+L + + + ++ + FF FY INRHK+TT+TPSYHAEQYSPDDNRFD RQFLY RW RQFR ID LV DSKK
Sbjct: 192 LAQLTPWVRGR--SGFLLVLGSANVDEGLRGYMTKYDCSSADLNPIGSISKLDLKRLLTWAARRFGWPALAEVEGAPPTAELRPNLGGEGEEHTQLDEEDMGMSY-------AELGDFGRLRMLQRCGPVSMFRTLCVAWRGQHTPSIVAEKVKRFFRFYSINRHKMTTVTPSYHAEQYSPDDNRFDHRQFLYNTRWPRQFRKIDLLVQEIDDSKK 398
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Match: A0A7S0BYR7_9STRA (Glutamine-dependent NAD(+) synthetase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0BYR7_9STRA) HSP 1 Score: 199 bits (506), Expect = 3.160e-52 Identity = 116/227 (51.10%), Postives = 148/227 (65.20%), Query Frame = -3 Query: 1434 QLLPWVRGTMAQGYLLVLGSANVDEALRGYMTKYDCSSADLNPIGAI-KVDLKRLLSWAATEYDYDVLSEIVAAPPTAELRPQESKPPKTVLSTAKRMKMIWG*HTKN*AP--------LGG*GRMTCVDRS---ACSRSLYMCGKNRA*ELLQRR*GCFFHFYGINRHKLTTLTPSYHAEQYSPDDNRFDLRQFLY-PRWTRQFRDIDTLVADSKKQQ*ISN**VK 2075
QLLPWVRGT G+LLVLGSANVDE LRGYMTKYDCSSADLNPIGAI K+DLKR+L WA EYD +L EI +APPTAELRP +++T + G HT+ LG GR+ + R + R L + + + + + ++ FF++Y +NRHK+ T+TP+YHAE YSPDDNRFDLRQFLY RWTRQF ID LV ++ +++ +K
Sbjct: 258 QLLPWVRGT--NGFLLVLGSANVDEGLRGYMTKYDCSSADLNPIGAISKLDLKRMLVWARIEYDMPILEEIASAPPTAELRP--------IVATDGEGE---GEHTQTDEDDMGMTYEELGHFGRLRKLSRCGPVSMFRKLRVTWSHLSSDQVAKKVKRFFYYYSVNRHKMCTITPAYHAEGYSPDDNRFDLRQFLYNTRWTRQFAMIDNLVRKDEQNVTVASSNIK 471
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Match: A0A6G0XTQ1_9STRA (Glutamine-dependent NAD(+) synthetase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTQ1_9STRA) HSP 1 Score: 203 bits (517), Expect = 3.600e-52 Identity = 117/211 (55.45%), Postives = 137/211 (64.93%), Query Frame = -3 Query: 1464 IEQLLPWVRGTMAQGYLLVLGSANVDEALRGYMTKYDCSSADLNPIGAI-KVDLKRLLSWAATEYDYDVLSEIVAAPPTAELRPQESKPPKTVLSTAKRMKMIWG*HTKN*APLGG*GRMTCVDRSA---CSRSLYMCGKNRA*ELLQRR*GCFFHFYGINRHKLTTLTPSYHAEQYSPDDNRFDLRQFLY-PRWTRQFRDIDTLVADSKK 2081
+ QLLPWVR G+LLVLGSANVDEALRGYMTKYDCSSADLNPIGA+ K DLKR L++AA +Y Y L+EIVAAPPTAELRP T + + M M + L GR+ +DRS R L + + + + FF +YG+NRHK+TTLTPSYHAE YSPDDNRFDLR FLY +WTRQF ID L D K
Sbjct: 507 LAQLLPWVRSR--SGFLLVLGSANVDEALRGYMTKYDCSSADLNPIGAVSKTDLKRFLAYAAQKYSYPTLAEIVAAPPTAELRPTSGTGEHTQVDE-EDMGMTY-------EELSWFGRLRKIDRSGPLWMFRKLGAIWTHLSSTEIAAKVKRFFFYYGVNRHKMTTLTPSYHAENYSPDDNRFDLRPFLYNSKWTRQFASIDALATDMDK 707
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Match: A0A7S2HYS5_9STRA (Glutamine-dependent NAD(+) synthetase n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2HYS5_9STRA) HSP 1 Score: 198 bits (503), Expect = 4.820e-52 Identity = 114/220 (51.82%), Postives = 144/220 (65.45%), Query Frame = -3 Query: 1446 QLLPWVRGTMAQGYLLVLGSANVDEALRGYMTKYDCSSADLNPIGAI-KVDLKRLLSWAATEYDYDVLSEIVAAPPTAELRPQESK-----PPKTVLSTAKRMKMIWG*HTKN*APLGG*GRMTCVDRS---ACSRSLYMCGKNRA*ELLQRR*GCFFHFYGINRHKLTTLTPSYHAEQYSPDDNRFDLRQFLY-PRWTRQFRDIDTLVADSKKQQ*ISN 2075
QLLPWVRG +G+LLVLGSANVDE LRGYMTKYDCSSADLNPIGAI K+DLK++L WAA Y ++VL EI APPTAELRP E + + + M M + LG GR+ + R + R L + + + + FF++Y +NRHK+ T+TP+YHAE YSPDDNRFDLRQFLY RWTRQF ID++V S++++ SN
Sbjct: 268 QLLPWVRGR--KGFLLVLGSANVDEGLRGYMTKYDCSSADLNPIGAISKLDLKKMLHWAAETYGHNVLDEIAGAPPTAELRPIERDGENGGEAEHTQTDEEDMGMTY-------TELGFYGRLRKISRCGPVSMFRKLSVTWSHLTLREVADKVKRFFYYYSVNRHKMCTVTPAYHAEAYSPDDNRFDLRQFLYNTRWTRQFAVIDSIVEASEQEEDSSN 478
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Match: A0A835ZEW9_9STRA (Glutamine-dependent NAD(+) synthetase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEW9_9STRA) HSP 1 Score: 203 bits (517), Expect = 6.830e-52 Identity = 117/208 (56.25%), Postives = 136/208 (65.38%), Query Frame = -3 Query: 1473 IEQLLPWVRGTMAQGYLLVLGSANVDEALRGYMTKYDCSSADLNPIGAI-KVDLKRLLSWAATEYDYDVLSEIVAAPPTAELRPQESKPPKTVLSTAKRMKMIWG*HTKN*APLGG*GRMTCVDRS---ACSRSLYMCGKNRA*ELLQRR*GCFFHFYGINRHKLTTLTPSYHAEQYSPDDNRFDLRQFLYP-RWTRQFRDIDTLVAD 2081
+ QLLPW RG G+LLVLGSANVDE+LRGYMTKYDCSSADLNPIGAI KVDLKR+LSWAA Y +D L+EI AAPPTAELRP E + + ++ L GR+ V + RSL A + + FF+FYG+NRHK+TTLTP+YHAE YSPDDNRFDLR FLY RW RQFRDID + D
Sbjct: 544 LAQLLPWARGR--PGFLLVLGSANVDESLRGYMTKYDCSSADLNPIGAISKVDLKRMLSWAAERYGWDSLTEIGAAPPTAELRPME----EGADDGGEHSQLDEDDMGMTYEELSHFGRLRKVGLCGPVSMFRSLVALWPALAPSAVAAKVKLFFYFYGVNRHKMTTLTPAYHAEAYSPDDNRFDLRPFLYNMRWPRQFRDIDAMAGD 745
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Match: F0W2J8_9STRA (Glutamine-dependent NAD(+) synthetase n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2J8_9STRA) HSP 1 Score: 202 bits (514), Expect = 9.270e-52 Identity = 110/206 (53.40%), Postives = 136/206 (66.02%), Query Frame = -3 Query: 1479 IEQLLPWVRGTMAQGYLLVLGSANVDEALRGYMTKYDCSSADLNPIGAI-KVDLKRLLSWAATEYDYDVLSEIVAAPPTAELRPQESKPPKTVLSTAKRMKMIWG*HTKN*APLGG*GRMTCVDRSA---CSRSLYMCGKNRA*ELLQRR*GCFFHFYGINRHKLTTLTPSYHAEQYSPDDNRFDLRQFLYP-RWTRQFRDIDTLV 2081
+ QLLPWVR G+LLVL SANVDEALRGYMTKYDCSS D+NPIGAI K DLK+LL+WA+ Y++ L ++V APPTAELRP + + V++ ++ + LG GR+ V R + L + + + + F +FY INRHK+TTLTPSYHAE YSPDDNRFDLR FLYP +WTRQFRDIDTL
Sbjct: 505 LAQLLPWVRSK--HGFLLVLSSANVDEALRGYMTKYDCSSGDINPIGAISKCDLKKLLTWASVRYNFPSLQKVVEAPPTAELRPMANNTSQEVVNELSHSQLDEADMGMSYEELGWFGRIRKVHRCGPLWMFKKLVLVWNHLTPPAVAEKVKRFVYFYSINRHKMTTLTPSYHAESYSPDDNRFDLRPFLYPSQWTRQFRDIDTLA 708
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Match: A0A7S0LDJ2_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LDJ2_9EUKA) HSP 1 Score: 191 bits (485), Expect = 1.190e-51 Identity = 111/206 (53.88%), Postives = 130/206 (63.11%), Query Frame = -3 Query: 1479 IEQLLPWVRGTMAQGYLLVLGSANVDEALRGYMTKYDCSSADLNPIGAI-KVDLKRLLSWAATEYDYDVLSEIVAAPPTAELRPQESKPPKTVLSTAKRMKMIWG*HTKN*APLGG*GRMTCVDR----SACSRSLYMCGKNRA*ELLQRR*GCFFHFYGINRHKLTTLTPSYHAEQYSPDDNRFDLRQFLYPRWTRQFRDIDTLV 2081
+ QLLPW RG G+LLVLGSANVDEALRGYMTKYDCSSAD+NPIG I K DLK L +AA EY Y L+++V APPTAELRP + + M M + LG GR+ ++R S + L G + + + FF YG NRHKLTTLTPSYHAE YSPDDNRFDLRQFLYP W RQF +D +V
Sbjct: 81 LAQLLPWTRGR--GGFLLVLGSANVDEALRGYMTKYDCSSADINPIGGISKGDLKSFLRYAAKEYGYSALADVVEAPPTAELRPLSGD--EVEQTDEADMGMTY-------EELGEYGRLRKIERCGPVSMFTALLGKWGGRLSPSDIAGKVKHFFSSYGRNRHKLTTLTPSYHAEGYSPDDNRFDLRQFLYPNWERQFATVDQIV 275
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Match: A0A485LD09_9STRA (Glutamine-dependent NAD(+) synthetase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD09_9STRA) HSP 1 Score: 202 bits (513), Expect = 1.230e-51 Identity = 117/207 (56.52%), Postives = 137/207 (66.18%), Query Frame = -3 Query: 1476 IEQLLPWVRGTMAQGYLLVLGSANVDEALRGYMTKYDCSSADLNPIGAI-KVDLKRLLSWAATEYDYDVLSEIVAAPPTAELRPQESKPPKTVLSTAKRMKMIWG*HTKN*APLGG*GRMTCVDRSA---CSRSLYMCGKNRA*ELLQRR*GCFFHFYGINRHKLTTLTPSYHAEQYSPDDNRFDLRQFLY-PRWTRQFRDIDTLVA 2081
+ QLLPWVR G+LLVLGSANVDEALRGYMTKYDCSSADLNPIGA+ K DLKRLL +A+T+Y Y L+EIVAAPPTAELRP + T + + M M + L GR+ +DR R L + + + + FF +YGINRHK+TTLTPSYHAE YSPDDNRFDLR FLY +WTRQF ID L A
Sbjct: 506 LAQLLPWVRSR--SGFLLVLGSANVDEALRGYMTKYDCSSADLNPIGAVSKTDLKRLLVYASTQYKYPTLAEIVAAPPTAELRPTSGEGEHTQVDE-EDMGMTYD-------ELSWFGRLRKIDRCGPLWMFRKLGAVWSHLSPLEIAAKVKRFFFYYGINRHKMTTLTPSYHAENYSPDDNRFDLRPFLYNSKWTRQFESIDILAA 702 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1006.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1006.3.1 >prot_C-australica_Contig_1006.3.1 ID=prot_C-australica_Contig_1006.3.1|Name=mRNA_C-australica_Contig_1006.3.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=448bp MGGSKARERTSRGVSNSRAHASHLVSHRSRSSISSSKFPPPSGPASVRTLback to top mRNA from alignment at C-australica_Contig_1006:3971..8898+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1006.3.1 ID=mRNA_C-australica_Contig_1006.3.1|Name=mRNA_C-australica_Contig_1006.3.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=4928bp|location=Sequence derived from alignment at C-australica_Contig_1006:3971..8898+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1006:3971..8898+ >mRNA_C-australica_Contig_1006.3.1 ID=mRNA_C-australica_Contig_1006.3.1|Name=mRNA_C-australica_Contig_1006.3.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1344bp|location=Sequence derived from alignment at C-australica_Contig_1006:3971..8898+ (Chrysoparadoxa australica CS_1217)back to top |