mRNA_C-australica_Contig_1006.1.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Match: D8LLP6_ECTSI (Glutamine cyclotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLP6_ECTSI) HSP 1 Score: 194 bits (494), Expect = 1.180e-54 Identity = 123/284 (43.31%), Postives = 163/284 (57.39%), Query Frame = 3 Query: 240 AGTPLQIGGNQSAKGSAPVLDTKPSQPENAG-IATDQWELLNWYPHDPTSFTQGLSWWNRKLHESTGMHG-RSRIMEVDLETGQMLREHRLKQEYFGEGMAIINDEAHMLTWQSKVGFRFNPLTLEPLGEFTFTTVTGQGWGITSDGDSAIVSDGGSTLTFFDPDTYAVRRQVQVTL-NGTPIAHLNELEYWVGKDGKGYVLANVWFKSDIIKIDPDTGIIVDVIRVKHLA*CRYSPCRFN**IHKRTAQKDLLSLCFPCFPQFDALYPKEQQQKELTSREAVL 1082 AGT + G+Q ++ L +P G +A ++ LL YPHD +FTQGL + L+ESTG++G +S + +VD ETG++L+ +L +YFGEGM I +D+ H LTW+SKVGF ++ T EP +F F T+TGQGWGIT+DG+S IVSDG L F+DP T R+V+V L +G P+ LNELE KGYV ANVWF ++ KIDP TG +VD +N F LYPK Q+KELTSREAVL Sbjct: 147 AGTSARQDGSQET--ASRNLSRRPELKTRGGQLAFARFSLLAEYPHDQHAFTQGLCYNGGFLYESTGLYGGKSTVRKVDTETGKVLQSVKLDDKYFGEGMVITDDKIHSLTWRSKVGFSWDLETFEPQEQFHFNTMTGQGWGITTDGESLIVSDGSEFLFFWDPATMKETRRVEVKLKDGRPLKKLNELEVV-----KGYVFANVWFDDNLYKIDPATGEVVDA---------------YN----------------------FSELYPKALQKKELTSREAVL 386
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Match: S9R2M6_9DELT (Glutamine cyclotransferase n=2 Tax=Cystobacter fuscus TaxID=43 RepID=S9R2M6_9DELT) HSP 1 Score: 185 bits (470), Expect = 2.100e-53 Identity = 98/193 (50.78%), Postives = 133/193 (68.91%), Query Frame = 3 Query: 309 PSQPENAGIATDQWELLNWYPHDPTSFTQGLSWWNRKLHESTGMHGRSRIMEVDLETGQMLREHRLKQEYFGEGMAIINDEAHMLTWQSKVGFRFNPLTLEPLGEFTFTTVTGQGWGITSDGDSAIVSDGGSTLTFFDPDTYAVRRQVQVTLNGTPIAHLNELEYWVGKDGKGYVLANVWFKSDIIKIDPDTG 887 PS P NA + + +E++ +PHDP +FTQGL + KL+E TG+ GRS + EV+LETG +LR+ RL+++YFGEG+AI + + LTW+S+ GF ++ TLE +G FT+ T +GWG+T DG+S I+SDG STL F DPDT+AVRR V+V G I+ LNELEY +G V ANVW I +IDP TG Sbjct: 4 PSPPANAPV--EGFEIVRSWPHDPFAFTQGLVFRQGKLYEGTGLQGRSSLREVELETGVVLRQSRLERQYFGEGIAIRGNRLYQLTWRSQEGFIYDAATLERVGHFTYPT---EGWGLTEDGESLIMSDGSSTLRFLDPDTFAVRRTVKVQDAGREISQLNELEYV-----RGEVYANVWMTDLIARIDPATG 186
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Match: A0A1L9AZF0_9DELT (Glutamine cyclotransferase n=1 Tax=Cystobacter ferrugineus TaxID=83449 RepID=A0A1L9AZF0_9DELT) HSP 1 Score: 174 bits (441), Expect = 7.910e-49 Identity = 92/190 (48.42%), Postives = 129/190 (67.89%), Query Frame = 3 Query: 318 PENAGIATDQWELLNWYPHDPTSFTQGLSWWNRKLHESTGMHGRSRIMEVDLETGQMLREHRLKQEYFGEGMAIINDEAHMLTWQSKVGFRFNPLTLEPLGEFTFTTVTGQGWGITSDGDSAIVSDGGSTLTFFDPDTYAVRRQVQVTLNGTPIAHLNELEYWVGKDGKGYVLANVWFKSDIIKIDPDTG 887 PE +A +E++ +PHDP++FTQGL + +L+E TG GRS + EV+LETG +LR+ RL+ +YFGEG+A+ + + LTW+S+ GF ++ T E +G FT++T +GWG+T DG+S I+SDG +TL F DPDT+AVRR V+V G I+ LNELEY +G V ANVW I +IDP TG Sbjct: 27 PERTPVAG--FEIVQSWPHDPSAFTQGLVFRQGRLYEGTGQLGRSSLREVELETGVVLRQIRLEPQYFGEGIALRGNRLYQLTWRSQEGFVYDATTFERVGRFTYST---EGWGLTEDGESLIMSDGTNTLRFLDPDTFAVRRTVKVLDAGREISQLNELEYV-----RGEVYANVWMTDLIARIDPATG 206
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Match: UPI001EEFC627 (glutaminyl-peptide cyclotransferase n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI001EEFC627) HSP 1 Score: 174 bits (441), Expect = 8.380e-49 Identity = 92/222 (41.44%), Postives = 142/222 (63.96%), Query Frame = 3 Query: 330 GIATDQWELLNWYPHDPTSFTQGLSWWNRKLHESTGMHGRSRIMEVDLETGQMLREHRLKQEYFGEGMAIINDEAHMLTWQSKVGFRFNPLTLEPLGEFTFTTVTGQGWGITSDGDSAIVSDGGSTLTFFDPDTYAVRRQVQVTLNGTPIAHLNELEYWVGKDGKGYVLANVWFKSDIIKIDPDTGIIVDVIRVKHLA*CRYSPCRFN**IHKRTAQKDLLS 995 G+ +E++ +PHDP +FTQGL + + KL+E TG +G+S + EV+LETG +LR+ L+++YFGEG+A + + LTW+S+VGF ++ T + +G F ++T +GWG+T+DG S I+SDG +TL F DP T+AV+R V VT G ++ LNELEY +G V ANVW I +IDP +G + + +K L +P +RT ++D+L+ Sbjct: 31 GVPVSGFEIVQSWPHDPRAFTQGLVYRDGKLYEGTGGNGQSSLREVELETGAVLRKRDLERQYFGEGIAFLGGRLYQLTWRSRVGFIYDAATFQQVGRFDYST---EGWGLTTDGTSLILSDGTATLRFLDPRTFAVQRTVTVTDEGREVSRLNELEYI-----RGEVYANVWMTDRIARIDPASGRVTGWLDLKGLL----AP-------EERTGREDVLN 233
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Match: UPI001EF4EB74 (glutaminyl-peptide cyclotransferase n=2 Tax=Archangium violaceum TaxID=83451 RepID=UPI001EF4EB74) HSP 1 Score: 172 bits (435), Expect = 6.520e-48 Identity = 88/183 (48.09%), Postives = 122/183 (66.67%), Query Frame = 3 Query: 339 TDQWELLNWYPHDPTSFTQGLSWWNRKLHESTGMHGRSRIMEVDLETGQMLREHRLKQEYFGEGMAIINDEAHMLTWQSKVGFRFNPLTLEPLGEFTFTTVTGQGWGITSDGDSAIVSDGGSTLTFFDPDTYAVRRQVQVTLNGTPIAHLNELEYWVGKDGKGYVLANVWFKSDIIKIDPDTG 887 T +++++ +PHDP +FTQGL + +L+ESTG+HG S + EV+LETG++LR H L E+FGEG+A++ + LTWQS VGF ++ T + +G F+++T GWG+T DG S I+SDG STL F DP T+ VRR V VT + LNELEY G+ V ANVW + I +IDP TG Sbjct: 34 TSGFQVVHSWPHDPEAFTQGLVYREGRLYESTGIHGESEVREVELETGRVLRGHALAWEHFGEGLALLGGRLYQLTWQSHVGFIYDAETFQEVGRFSYST---DGWGLTDDGSSLILSDGTSTLRFLDPATFQVRRTVTVTDGSAEVWQLNELEYVNGE-----VYANVWKRDVIARIDPATG 208
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Match: A0A084SZW1_9DELT (Glutamine cyclotransferase n=4 Tax=Archangium TaxID=47 RepID=A0A084SZW1_9DELT) HSP 1 Score: 172 bits (435), Expect = 7.100e-48 Identity = 87/207 (42.03%), Postives = 133/207 (64.25%), Query Frame = 3 Query: 300 DTKPSQPENAGIATDQWELLNWYPHDPTSFTQGLSWWNRKLHESTGMHGRSRIMEVDLETGQMLREHRLKQEYFGEGMAIINDEAHMLTWQSKVGFRFNPLTLEPLGEFTFTTVTGQGWGITSDGDSAIVSDGGSTLTFFDPDTYAVRRQVQVTLNGTPIAHLNELEYWVGKDGKGYVLANVWFKSDIIKIDPDTGIIVDVIRVKHL 920 + P+ A ++++ +PHDP ++TQGL + + +L E TG++G+S + EV+LETG +LR H L+++YFGEG+ + + LTW+S VGF ++ TL+ +G F + T +GWG+T DG S I+SDG STL F DP T A++R ++VT NG I+ LNELE+ KG + ANV+ ++DI +IDP TG + I + L Sbjct: 24 ERSPASTPPAATPVFGFDVVQSWPHDPNAYTQGLVYRDGRLFEGTGLNGQSSLREVELETGAVLRRHALERQYFGEGITLFKGRLYQLTWRSHVGFIYDATTLQQVGRFEYPT---EGWGLTDDGTSLIMSDGSSTLRFLDPATLALQRSIRVTDNGREISQLNELEFI-----KGEIYANVYMENDIARIDPATGKVTGWISLSGL 222
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Match: A0A0G2ZYA3_9DELT (Glutamine cyclotransferase n=2 Tax=Archangium gephyra TaxID=48 RepID=A0A0G2ZYA3_9DELT) HSP 1 Score: 172 bits (435), Expect = 7.310e-48 Identity = 88/204 (43.14%), Postives = 133/204 (65.20%), Query Frame = 3 Query: 309 PSQPENAGIATDQWELLNWYPHDPTSFTQGLSWWNRKLHESTGMHGRSRIMEVDLETGQMLREHRLKQEYFGEGMAIINDEAHMLTWQSKVGFRFNPLTLEPLGEFTFTTVTGQGWGITSDGDSAIVSDGGSTLTFFDPDTYAVRRQVQVTLNGTPIAHLNELEYWVGKDGKGYVLANVWFKSDIIKIDPDTGIIVDVIRVKHL 920 P+ A +E++ +PHDP ++TQGL + + +L+E TG+HG+S + EV+LETG +LR H L++++FGEG+A+ + LTW+S+VGF ++ T + +G F + T +GWG+T DG S I+SDG STL F DP T AV+R ++VT G I+ LNELE+ KG + ANV+ ++DI +IDP TG + I + L Sbjct: 28 PAPTPPASTPVSGFEVVQSWPHDPNAYTQGLVYRDGRLYEGTGLHGQSSLREVELETGAVLRRHDLERQHFGEGIALFKGRLYQLTWRSQVGFIYDAATFQQVGRFAYPT---EGWGLTDDGTSLIMSDGSSTLRFLDPTTLAVQRTLRVTDAGREISLLNELEFI-----KGELYANVYLQNDIARIDPATGKVTGWINLSGL 223
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Match: UPI001CCDABA0 (glutaminyl-peptide cyclotransferase n=1 Tax=Hyalangium sp. H56D21 TaxID=2861190 RepID=UPI001CCDABA0) HSP 1 Score: 172 bits (435), Expect = 8.410e-48 Identity = 93/213 (43.66%), Postives = 133/213 (62.44%), Query Frame = 3 Query: 249 PLQIGGNQSAKGSAPVLDTKPSQPENAGIATDQWELLNWYPHDPTSFTQGLSWWNRKLHESTGMHGRSRIMEVDLETGQMLREHRLKQEYFGEGMAIINDEAHMLTWQSKVGFRFNPLTLEPLGEFTFTTVTGQGWGITSDGDSAIVSDGGSTLTFFDPDTYAVRRQVQVTLNGTPIAHLNELEYWVGKDGKGYVLANVWFKSDIIKIDPDTG 887 P+ + G G A ++ + + G T +E++ +PHDP +FT+GL + +L+ESTG++G S + EV LETGQ+LR L+Q+YFGEG+A+ + MLTW+S VGF ++ T +P G+F+F G+GWG+T DG S I+S+G STL F DP T V+R + VT G ++ LNELEY KG + ANVW I +IDP TG Sbjct: 13 PVFLRGLMPLLGLALLVSCSSAHGASQGAPTQGFEVVQSWPHDPRAFTEGLVYREGRLYESTGLNGSSSMREVALETGQVLRSLALEQKYFGEGIALFGGKLFMLTWRSHVGFIYDAATFQPTGQFSFK---GEGWGLTDDGSSLIMSNGSSTLRFLDPATLKVQRSITVTDAGREVSLLNELEYV-----KGEIYANVWRTDLIARIDPATG 217
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Match: A0A3D4VE04_9BACT (Glutamine cyclotransferase n=2 Tax=Gemmatimonas aurantiaca TaxID=173480 RepID=A0A3D4VE04_9BACT) HSP 1 Score: 171 bits (433), Expect = 1.530e-47 Identity = 86/194 (44.33%), Postives = 130/194 (67.01%), Query Frame = 3 Query: 339 TDQWELLNWYPHDPTSFTQGLSWWNRKLHESTGMHGRSRIMEVDLETGQMLREHRLKQEYFGEGMAIINDEAHMLTWQSKVGFRFNPLTLEPLGEFTFTTVTGQGWGITSDGDSAIVSDGGSTLTFFDPDTYAVRRQVQVTLNGTPIAHLNELEYWVGKDGKGYVLANVWFKSDIIKIDPDTGIIVDVIRVKHL 920 T ++++N YPHDP +FTQGL W + +L ESTG G S + EVDL +G+++R+ L+Q +FGEGM I+ D+ + LTWQS F ++ T G F++ G+GWG+T+DG S I+S+G +++ + DP+T+AV + + VT GTP+A +NELE WV KG + ANVW I +IDP+TG ++ I + +L Sbjct: 40 TYTFDVVNVYPHDPAAFTQGLQWHDNRLFESTGQVGTSGLREVDLSSGRVVRQQPLEQPHFGEGMVILGDKLYQLTWQSGKAFTYDWKTFTRTGTFSYD---GEGWGLTTDGTSLIMSNGSASIVWRDPNTFAVTKTLSVTDRGTPVAAINELE-WV----KGEIWANVWQVDSIARIDPNTGTVIGWIDLSNL 225
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Match: A0A2N3DA68_9PROT (Glutamine cyclotransferase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-16 TaxID=2013662 RepID=A0A2N3DA68_9PROT) HSP 1 Score: 170 bits (431), Expect = 2.950e-47 Identity = 104/229 (45.41%), Postives = 135/229 (58.95%), Query Frame = 3 Query: 225 GALCFAGTPL------QIGGNQSAKGSAPVLDTKPSQPENAGIATDQWELLNWYPHDPTSFTQGLSWWNRKLHESTGMHGRSRIMEVDLETGQMLREHRLKQEYFGEGMAIINDEAHMLTWQSKVGFRFNPLTLEPLGEFTFTTVTGQGWGITSDGDSAIVSDGGSTLTFFDPDTYAVRRQVQVTLNGTPIAHLNELEYWVGKDGKGYVLANVWFKSDIIKIDPDTGII 893 GA F TPL Q+ QSA AP +P++ Q E+ +PHDP +FTQGL + + +L ESTG HG S I EVDL++G++ RE RL YFGEG D LTW+ GFR++ T LGEFT+ G+GWG+T DG+S I+SDG + L F DP+T A RR++ VT G PI LNELEY +G VLANVW + I +IDP +G+I Sbjct: 3 GATPFLSTPLTARPTAQVAAPQSA---AP----RPTESPRPVAPVVQAEVCATFPHDPGAFTQGLFFHDGRLFESTGQHGESAIREVDLQSGKVKREVRLPARYFGEGSTSWGDMIVSLTWRHGKGFRWDRETFRLLGEFTYP---GEGWGLTQDGESLILSDGTAQLRFLDPETMAERRRITVTWQGRPIRQLNELEYV-----RGEVLANVWHTNLIARIDPKSGVI 216 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1006.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1006.1.1 >prot_C-australica_Contig_1006.1.1 ID=prot_C-australica_Contig_1006.1.1|Name=mRNA_C-australica_Contig_1006.1.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=278bp MSRRRVRERKASKPSYTLRRPKMVPQTKRRILGASLVIGLGLVGGALCFAback to top mRNA from alignment at C-australica_Contig_1006:821..3891- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1006.1.1 ID=mRNA_C-australica_Contig_1006.1.1|Name=mRNA_C-australica_Contig_1006.1.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=3071bp|location=Sequence derived from alignment at C-australica_Contig_1006:821..3891- (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1006:821..3891- >mRNA_C-australica_Contig_1006.1.1 ID=mRNA_C-australica_Contig_1006.1.1|Name=mRNA_C-australica_Contig_1006.1.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=834bp|location=Sequence derived from alignment at C-australica_Contig_1006:821..3891- (Chrysoparadoxa australica CS_1217)back to top |