mRNA_C-australica_Contig_1005.6.1 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1005.6.1
Unique NamemRNA_C-australica_Contig_1005.6.1
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: D7G7C2_ECTSI (Rep_fac_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C2_ECTSI)

HSP 1 Score: 471 bits (1211), Expect = 1.660e-162
Identity = 233/355 (65.63%), Postives = 293/355 (82.54%), Query Frame = 3
Query:  126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190
            MLWVDK+RP +L  +++HP L+ RL AMSEDGEIPHLLFYGP+G+GKKTR+LALLK I+GPGA +VRLEHR+FKTPSNR +E+TTVAS+YHIE+S  DAGIYDR+V+QDIIKEIA ++S++++M   G G  +K+ K   KVV+L+GVDRLT+QAQA LRRTME+YT SCRLIL C+S +KVIEPVRSRCLGVRVPAP+ +++C VL S+ +KES+ LP  LAAR+A+ S RNLR+AVLM+E+C+VQ YPF  DQ V + DWE YI Q+A+ +  EQ+P+ LLE R KLYELL NCIPAD+IL+TL++EL K  +  +  EV  W+AFYE RLH GSKEI HLEAFVAKF+S+YK
Sbjct:    1 MLWVDKHRPKSLDSLDVHPELTTRLAAMSEDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYVVQDIIKEIAQNRSISASMG--GGGSDDKKSKIGHKVVVLVGVDRLTKQAQAGLRRTMERYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPSESEVCSVLTSVCRKESLTLPPALAARVAKVSKRNLRRAVLMIEACRVQQYPFSEDQEVQMTDWENYITQLAREVVLEQSPRRLLEAREKLYELLTNCIPADIILKTLTRELVKNLDCKLWGEVFKWAAFYEHRLHMGSKEILHLEAFVAKFMSIYK 353          
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A835YV35_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV35_9STRA)

HSP 1 Score: 471 bits (1211), Expect = 2.820e-162
Identity = 239/368 (64.95%), Postives = 291/368 (79.08%), Query Frame = 3
Query:  126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTS------------VGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDD-IRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190
            MLW+DK+RP +L K+++HP L++RLK MS+DGEIPHLLFYGPSGAGK+TRILALLKEIFGPGA +V LEHRTFKTPSNR+IE+TTVAS+YHIE+S  DAG YDRFV+Q++IKEIAGS SLT+TM                        K TFKVVLL GVD LT+QAQAALRRTMEKYT SCRLILCCNS +KVI+PVRSRCL VRVPAP+  +I  VL ++++KE +ALP  LAAR++  SGRNLR+A+LMLE+CKV+  P   +Q V LADWE YI+ +AK +T EQ+PQ L+  R KLYELL NCIPAD++LR L++EL  L  DD ++HEVAHW+AFY+ RL Q +KE+F LEAFVAKF+ LYK
Sbjct:    1 MLWLDKHRPNSLNKLDVHPDLTERLKIMSKDGEIPHLLFYGPSGAGKRTRILALLKEIFGPGAERVHLEHRTFKTPSNRTIELTTVASNYHIEMSPGDAGTYDRFVVQEVIKEIAGSTSLTATMGGNAXXXXXXXXXXXXXXXXXXXXKPTFKVVLLTGVDSLTKQAQAALRRTMEKYTSSCRLILCCNSISKVIDPVRSRCLSVRVPAPSEPEITGVLGAVARKEGVALPAELAARISRASGRNLRRALLMLEACKVEQSPLLANQRVALADWETYIESLAKDITQEQSPQALVAARGKLYELLVNCIPADVVLRRLARELIALMADDALKHEVAHWAAFYDTRLRQSAKEVFQLEAFVAKFMMLYK 368          
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A7S2SEJ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEJ8_9STRA)

HSP 1 Score: 439 bits (1130), Expect = 2.380e-150
Identity = 220/355 (61.97%), Postives = 286/355 (80.56%), Query Frame = 3
Query:  126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190
            ML+VDK+RPTTL K++ +  L+QRL+ ++ DG++PHL+ YGPSGAGKKTRI ALL+E++G    + RL+HR+FKTPSNR++E+TT+AS+YHIE++A+DAGIYDR VIQDIIKEIA S  L    T  G+         +FKVVLLM VDRLT+QAQAALRRTMEKYT SCRLIL C + +KVIEPVRSRCLG+RV APT +++C VL ++++KE + +P  LA R+A+ SGRN+R+A+LMLE+ KVQ YPF  DQ V L DWE+YI  +A+ +TT+Q+PQ L++ R  LYELL NCIPAD+I++TL++EL K  +D ++HEVAHW+AFYE R+  GSKEIFHLEAFVAKF+SLYK
Sbjct:    1 MLFVDKHRPTTLGKLDFNEQLTQRLQGLAADGDLPHLIVYGPSGAGKKTRINALLREMYGSAVERRRLDHRSFKTPSNRTVELTTIASNYHIEMNASDAGIYDRIVIQDIIKEIAQSNPLH---TQEGA--------KSFKVVLLMEVDRLTRQAQAALRRTMEKYTSSCRLILYCTNPSKVIEPVRSRCLGIRVAAPTEDEVCGVLANVARKEKLTMPPELALRIAKLSGRNVRRALLMLEATKVQQYPFTVDQTVQLPDWELYIATLAQEMTTDQSPQKLIKAREMLYELLTNCIPADVIMKTLTRELCKSLDDQLKHEVAHWAAFYEHRIVIGSKEIFHLEAFVAKFMSLYK 344          
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A4D9D7D4_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7D4_9STRA)

HSP 1 Score: 438 bits (1126), Expect = 1.150e-149
Identity = 219/356 (61.52%), Postives = 280/356 (78.65%), Query Frame = 3
Query:  126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIA-LPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190
            MLWVDK+RPTTLAK++ H  L+ RL+A+SEDGE+PHLLFYGP GAGKKTRI+ALL+++FG G  K RLEH+TFKTP+ R+IE+T +AS++H EI+AA+AG  DRFV+Q++IKEIA S +  + M   G           +KVV+L  VDRL++QAQAALRRTMEKYT +CRLILCCNS+++VIEPVRSRCLG+RV AP+   IC +L  +SKKES   LPE LA R+A+ SGRNLR+A+LMLE+C+VQ +PF  +Q V + DWE YI ++A  LT EQ+PQ L+  R  LYELL NCIP+D+IL+TL +EL    +D ++HEV HW+AFYE R+  GSKEIFHLEAFVAKF++LYK
Sbjct:    1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGG--------RAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFTAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRVGSKEIFHLEAFVAKFMALYK 348          
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A7S2PRB1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRB1_9STRA)

HSP 1 Score: 423 bits (1087), Expect = 7.900e-144
Identity = 209/352 (59.38%), Postives = 269/352 (76.42%), Query Frame = 3
Query:  126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLS 1181
            MLWVDK+RP  L  ++  P +++RL+A+SED  IPHLLFYGPSG+GKKTRI ALL+ IFGP A ++RL+ RTF TP+ R++EI  + S+ HIE+S  DAG+YDR+VIQD+IKE+A +++LTS   +      E      FKVV+L  VDRL++QAQA+LRRTMEKYT SCRLILCC + +KVIEPVRSRCLG+RV AP+ +DIC+VL+ +S+KE   LP+ LA  +A  SGRN+R+A+LMLE+CKVQ      DQPV   DWE+YI Q+A     EQ+PQ LL  R KLYELL NCIPAD+IL+TL+ EL K  +D ++HEV  W+AFYE RL QGSK+IFHLEAF+AKF++
Sbjct:    1 MLWVDKHRPNRLDSLDYAPNITKRLQALSEDKNIPHLLFYGPSGSGKKTRINALLRAIFGPTADRLRLDKRTFTTPTKRTVEINMICSNVHIELSPGDAGLYDRYVIQDVIKEMASNKALTSGTITTKKDGSEPNAGTEFKVVVLNEVDRLSKQAQASLRRTMEKYTSSCRLILCCANQSKVIEPVRSRCLGIRVAAPSHDDICRVLKLVSRKEQFTLPDELAINIARESGRNIRRAILMLEACKVQQNILTADQPVQKTDWELYISQLAMDCAREQSPQKLLAAREKLYELLINCIPADVILKTLALELMKNLDDSLKHEVIEWAAFYEHRLCQGSKDIFHLEAFIAKFMA 352          
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: F0XVP2_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVP2_AURAN)

HSP 1 Score: 421 bits (1083), Expect = 3.310e-143
Identity = 215/355 (60.56%), Postives = 271/355 (76.34%), Query Frame = 3
Query:  126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190
            MLWVDK+RP  L K+  H  LS+RL  ++ DG+IPHLLFYGPSGAGKKTRI+ALL+ ++G GA K RLEHR FKTP+N++IE+TTVAS+YHIEI+ +DAG  DR+V+Q++IKEIA S SL              + +  +KVVLL+ VDRLT+QAQA LRRTMEK T SCRLILCCN+ +KVI+P+RSRCLG+RV APT  +I  VL  ++ +E + LP  LAAR+A+ S RNLR+A+L LE CKVQ YPF   Q VPL DWE Y+  IA  +  EQ+PQ LL TR KLYELL+ CIPAD+IL+TL++EL K  +D+++ EV  W+AFYE R+ QG+KEIFHLEAFVAKF+ LYK
Sbjct:    1 MLWVDKHRPLELGKMSYHGELSERLATLAADGDIPHLLFYGPSGAGKKTRIMALLRALYGAGAEKQRLEHRDFKTPTNKAIEVTTVASNYHIEINPSDAGNNDRYVVQEVIKEIAQSGSL----------HKGDKGRVGYKVVLLVEVDRLTRQAQAGLRRTMEKCTSSCRLILCCNNPSKVIDPLRSRCLGIRVAAPTEAEIVAVLDDVAARERLDLPPALAARIAKASKRNLRRAILSLEECKVQQYPFDAAQAVPLPDWEQYVVAIASDIAREQSPQRLLATRDKLYELLSKCIPADVILKTLARELLKNLDDEMKAEVLKWAAFYEHRITQGNKEIFHLEAFVAKFMCLYK 345          
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A7S4V0A9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V0A9_9STRA)

HSP 1 Score: 416 bits (1070), Expect = 7.090e-141
Identity = 205/369 (55.56%), Postives = 278/369 (75.34%), Query Frame = 3
Query:  126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDG-EIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPE--------KRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQ-----SYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190
            MLWVDK+RP  L ++  H   ++RL ++S D   +PHLLFYGPSGAGKKTR++ALL+ ++GPGA ++RL+ RTF TP+ R++EI  ++S+YHIEIS  DAG+ DRFV+Q++IKE+A ++++ S   ++  G           K+K   FKVV+L+ VDRL++QAQAALRRTMEKY+ SCRLILCCN+ +KVIEPVRSRCLG+RVPAP+ +DIC VL+ +S+KESI LP+ LA  +A  S RN+R+A+LMLESC VQ           DQPV   DWE+YI Q+A  +T EQ+PQ L+  R KLYELL NCIPAD+I++TL+ EL K  ++ ++HEV  W+AFYE R+  GSK+IFHLEAF+AK++++YK
Sbjct:    1 MLWVDKHRPNRLNQLSYHAATTERLTSLSADPTSMPHLLFYGPSGAGKKTRVMALLRALYGPGAERLRLDKRTFTTPTKRTVEINLISSNYHIEISPGDAGLNDRFVVQEVIKEMAANRNIASGSGTLSMGAKTDAEAAGNTKKKGVDFKVVVLVEVDRLSRQAQAALRRTMEKYSASCRLILCCNNQSKVIEPVRSRCLGIRVPAPSHDDICSVLKKVSRKESITLPDELAVNIARESSRNMRRALLMLESCHVQRRDAHGNSLSADQPVQKTDWELYISQLASEITREQSPQRLMAAREKLYELLINCIPADVIIKTLALELTKNLDESLKHEVIEWAAFYEHRIAMGSKDIFHLEAFIAKYMAIYK 369          
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A7S2U7C3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7C3_9STRA)

HSP 1 Score: 413 bits (1062), Expect = 1.160e-139
Identity = 207/369 (56.10%), Postives = 278/369 (75.34%), Query Frame = 3
Query:  126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSE-DGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSV--------GSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYP-----FKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190
            MLWVDK+RPT L  +  HP  + RL++++     +PHLLFYGP GAGKKTRI ALL+ I+GPGA ++RL+ RTF TP+ R+++I  ++S+YHIE+S  DAGI DRFV+QD+IKE+A ++SL+S +T+V         S    K+ +  FKVV+L+ VD+L++QAQAALRRTMEKY+ SCRLILCCN+ +KVI+PVRSRCLG+R+ APT +DICQVL++ ++KESI LP+ LA  +A  S RN+R+A+LMLESC VQS           QPV   DWE+YI Q+A  +T EQ+PQ L+  R KLYELL NCIPAD+I++ L+ EL K  +D ++HEV  W+AFYE R+  GSK+IFHLEAFVAK++++YK
Sbjct:    1 MLWVDKHRPTQLKNLSYHPDTTARLESLAAAPANMPHLLFYGPPGAGKKTRINALLRAIYGPGAERLRLDKRTFTTPTKRTVDINMISSNYHIEMSPGDAGINDRFVVQDVIKEMAANKSLSSAVTAVTTHNASQESSSSGTKKTQIDFKVVVLVEVDKLSRQAQAALRRTMEKYSTSCRLILCCNNQSKVIDPVRSRCLGIRIAAPTHDDICQVLKATARKESIILPDELAVNIARQSSRNMRRAMLMLESCHVQSRDATGGTLSAHQPVQKTDWELYITQLASEITREQSPQRLMAAREKLYELLINCIPADVIIKNLAFELMKNLDDSLKHEVIEWAAFYEHRIATGSKDIFHLEAFVAKYMAIYK 369          
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A8J2WW47_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WW47_9STRA)

HSP 1 Score: 406 bits (1044), Expect = 2.990e-137
Identity = 203/355 (57.18%), Postives = 270/355 (76.06%), Query Frame = 3
Query:  126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190
            MLWVDK+RPT L K+  H  L +RL +M+EDG+IPHLLFYGPSGAGKKTR+  LLK ++G GA K RLEHR FKTP+N++IE+TTVAS+YHIE++ +DAG  DRFV+Q++IKEIA S S+   +   G+    ++K   FKV+L++ VDRL++QAQA LRRTMEK + +CRL++ C + +KVI+P+RSRCLG+R+ AP+  +I  VL  + +KE + LP+ LAAR+A+ SGRNLR+A+L LE CKV  YPF    PVP  DWE+YI+ IA+ +  EQ+P  L+ TR KLYELLA CIPAD+IL+ L  EL    +D+++ +V   +AFYE R+ QGSKEIFHLEAFVAKF+ +YK
Sbjct:    1 MLWVDKHRPTALEKLSYHAELGERLGSMAEDGDIPHLLFYGPSGAGKKTRVQCLLKALYGAGAEKQRLEHREFKTPTNKTIEVTTVASNYHIEMNPSDAGNNDRFVVQEVIKEIAQSGSV---LAKTGA----QKKGPAFKVILMVEVDRLSRQAQAGLRRTMEKSSSACRLVMICTNPSKVIDPIRSRCLGIRIAAPSEEEIVGVLHEVCEKERLTLPDELAARIAKSSGRNLRRAILALEECKVAQYPFNPSMPVPQPDWEVYIKAIAQDICREQSPARLVATRDKLYELLAKCIPADVILKELCAELVSKLDDELKPQVMACAAFYEHRVQQGSKEIFHLEAFVAKFMVIYK 348          
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: B7FSY5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSY5_PHATC)

HSP 1 Score: 406 bits (1044), Expect = 3.560e-137
Identity = 210/384 (54.69%), Postives = 276/384 (71.88%), Query Frame = 3
Query:  126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGE-IPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKT-DQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYKVRASSACLFFALSLPFSFLQKYLTDMF 1271
            MLWVDKYRP  L  +  H  +SQRL +++ + E +PHL FYGP+GAGKKTRI ALL  ++GPGA +++L+ RTF TP+ R++E+  + S+YHIEIS  DAG+ DRFVIQD+IKE+A ++++ ++ TS       K   ATFK V+L+ VDRL++QAQAALRRTMEKY  +CRLIL CN+ +KVIEPVRSRCLG+RV APT ++IC+VL+S+S  ES  LP+ LA  +A  S RN+R+A+LMLE+C VQ     T DQPV   DWE+YI Q+A  +T EQ PQ L+  R KLYELL NCIPA++I++TL+KEL K  +D ++ EV  W+AFYE R+  GSKEIFHLEAFVAKF+++YK                    KYL D+F
Sbjct:    1 MLWVDKYRPVKLDDLSYHDTISQRLSSLASNPESMPHLFFYGPAGAGKKTRITALLGSLYGPGASRLKLDKRTFTTPTKRTVELNMITSNYHIEISPGDAGLNDRFVIQDVIKEMASNKNVGASATS----SERKSGAATFKTVVLVEVDRLSRQAQAALRRTMEKYASTCRLILVCNNQSKVIEPVRSRCLGIRVAAPTEDEICKVLKSVSINESFMLPDELAINIARESSRNVRRAILMLEACYVQKRGALTKDQPVQKTDWELYINQLAVEITREQTPQRLMAAREKLYELLVNCIPANVIIKTLAKELMKNLDDSLKREVIEWAAFYEHRISLGSKEIFHLEAFVAKFMAVYK--------------------KYLNDLF 360          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7C2_ECTSI1.660e-16265.63Rep_fac_C domain-containing protein n=2 Tax=Ectoca... [more]
A0A835YV35_9STRA2.820e-16264.95P-loop containing nucleoside triphosphate hydrolas... [more]
A0A7S2SEJ8_9STRA2.380e-15061.97Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A4D9D7D4_9STRA1.150e-14961.52AAA domain-containing protein n=2 Tax=Monodopsidac... [more]
A0A7S2PRB1_9STRA7.900e-14459.38Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]
F0XVP2_AURAN3.310e-14360.56AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
A0A7S4V0A9_9STRA7.090e-14155.56Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S2U7C3_9STRA1.160e-13956.10Hypothetical protein n=1 Tax=Attheya septentrional... [more]
A0A8J2WW47_9STRA2.990e-13757.18Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
B7FSY5_PHATC3.560e-13754.69Predicted protein n=3 Tax=Phaeodactylum tricornutu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1005contigC-australica_Contig_1005:14596..17038 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G7C2
Preferred nameRFC3
PFAMsDNA_pol3_delta2,Rep_fac_C
Model size1305
Max annot lvl2759|Eukaryota
KEGG koko:K10756
KEGG Pathwayko03030,ko03420,ko03430,map03030,map03420,map03430
KEGG ModuleM00289,M00295
Hectar predicted targeting categoryother localisation
GOsGO:0000228,GO:0000723,GO:0000731,GO:0000785,GO:0000790,GO:0000819,GO:0003674,GO:0003676,GO:0003677,GO:0003689,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005657,GO:0005663,GO:0005694,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006271,GO:0006272,GO:0006275,GO:0006281,GO:0006283,GO:0006289,GO:0006296,GO:0006297,GO:0006301,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007059,GO:0007062,GO:0008094,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009628,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010033,GO:0010556,GO:0010557,GO:0010604,GO:0016043,GO:0016070,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019725,GO:0019985,GO:0022402,GO:0022616,GO:0030894,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031389,GO:0031390,GO:0031391,GO:0031974,GO:0031981,GO:0032200,GO:0032201,GO:0032991,GO:0032993,GO:0033170,GO:0033260,GO:0033554,GO:0033683,GO:0034641,GO:0034644,GO:0034645,GO:0034654,GO:0042221,GO:0042276,GO:0042592,GO:0042623,GO:0042769,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043596,GO:0043599,GO:0043601,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044454,GO:0044464,GO:0044786,GO:0045935,GO:0046483,GO:0046683,GO:0048518,GO:0048522,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051171,GO:0051173,GO:0051276,GO:0051338,GO:0051347,GO:0051606,GO:0051716,GO:0060249,GO:0060255,GO:0061860,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070914,GO:0070987,GO:0071214,GO:0071478,GO:0071482,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090305,GO:0090329,GO:0090618,GO:0097159,GO:0098813,GO:0104004,GO:1900262,GO:1900264,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1904949,GO:2000112,GO:2000278,GO:2000573
Exons11
Evalue2.09e-164
EggNOG OGsCOG0470@1|root,KOG2035@2759|Eukaryota
DescriptionDNA replication
Cds size1152
COG categoryL
BRITEko00000,ko00001,ko00002,ko03032,ko03036,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1005.6.1prot_C-australica_Contig_1005.6.1Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1005 14721..17010 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586739.4463794-UTR-C-australica_Contig_1005:14595..147201682586739.4463794-UTR-C-australica_Contig_1005:14595..14720Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1005 14596..14720 +
1682586739.5637097-UTR-C-australica_Contig_1005:17010..170381682586739.5637097-UTR-C-australica_Contig_1005:17010..17038Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1005 17011..17038 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586739.458182-CDS-C-australica_Contig_1005:14720..147231682586739.458182-CDS-C-australica_Contig_1005:14720..14723Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 14721..14723 +
1682586739.4687977-CDS-C-australica_Contig_1005:14793..148741682586739.4687977-CDS-C-australica_Contig_1005:14793..14874Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 14794..14874 +
1682586739.477359-CDS-C-australica_Contig_1005:14948..150761682586739.477359-CDS-C-australica_Contig_1005:14948..15076Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 14949..15076 +
1682586739.485642-CDS-C-australica_Contig_1005:15137..152361682586739.485642-CDS-C-australica_Contig_1005:15137..15236Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 15138..15236 +
1682586739.494773-CDS-C-australica_Contig_1005:15325..154371682586739.494773-CDS-C-australica_Contig_1005:15325..15437Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 15326..15437 +
1682586739.5044062-CDS-C-australica_Contig_1005:15531..156511682586739.5044062-CDS-C-australica_Contig_1005:15531..15651Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 15532..15651 +
1682586739.51565-CDS-C-australica_Contig_1005:15831..159031682586739.51565-CDS-C-australica_Contig_1005:15831..15903Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 15832..15903 +
1682586739.5255988-CDS-C-australica_Contig_1005:15962..160211682586739.5255988-CDS-C-australica_Contig_1005:15962..16021Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 15963..16021 +
1682586739.5353298-CDS-C-australica_Contig_1005:16201..163491682586739.5353298-CDS-C-australica_Contig_1005:16201..16349Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 16202..16349 +
1682586739.5451834-CDS-C-australica_Contig_1005:16602..167251682586739.5451834-CDS-C-australica_Contig_1005:16602..16725Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 16603..16725 +
1682586739.555502-CDS-C-australica_Contig_1005:16803..170101682586739.555502-CDS-C-australica_Contig_1005:16803..17010Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1005 16804..17010 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1005.6.1

>prot_C-australica_Contig_1005.6.1 ID=prot_C-australica_Contig_1005.6.1|Name=mRNA_C-australica_Contig_1005.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=384bp
MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTR
ILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAG
IYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDR
LTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTV
NDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYP
FKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPAD
MILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKF
LSLYKVRASSACLFFALSLPFSFLQKYLTDMFD*
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mRNA from alignment at C-australica_Contig_1005:14596..17038+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1005.6.1 ID=mRNA_C-australica_Contig_1005.6.1|Name=mRNA_C-australica_Contig_1005.6.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2443bp|location=Sequence derived from alignment at C-australica_Contig_1005:14596..17038+ (Chrysoparadoxa australica CS_1217)
GCCTCTCTCGTCTTATCTTCCAATCTCATTGTACCACCCCTCTATCTCTG TCTCAATAATCCCAGCTCACCCATCCCGAATTTTAAACTCGAACTACATA CCAGGACAGAAAGGAAGTAGAGACTATGGTAAGCTTTCGTTTGCTACCCT ACATCTTCCCGCTGATTCTCATCTTGCTGCTTTGCCCCCCCCATGCAGTT GTGGGTTGATAAGTACAGGCCTACCACCCTTGCTAAGATTGAGCTCCACC CGGGCCTTTCCCAGCGTCTCAAAGCTATGGTAAGTTGATGCTCAGCCCCG AAGTCCATGATGGCTATCACTTACCCTCTTCATTTCTGTCCCTTGCCCTG CAGTCAGAGGACGGTGAGATTCCTCATTTACTATTCTACGGACCCTCTGG CGCCGGCAAAAAGACGAGGATCCTTGCCCTTCTGAAGGAGATATTTGGTC CGGGAGCTGGTAAAGTGCGTCTGGAGCACAGGTAGCCAGCTATCTCTGCA ACAAGCTACTCCACTGCTCCCCTCATCATCCCCGTGCCTCAGAACCTTCA AGACACCTTCCAACAGGTCTATTGAGATTACAACAGTAGCCAGCAGTTAT CATATCGAGATCAGTGCTGCAGATGCTGGGATCTACGATAGGTAGGATCT TGGCAAATTCCGGGCTACTTTGCTGCAATCTCACTCAAGCATTGTCTTTC CTACCGCCTTCTCGTTGTTCACTTTTTTAGGTTTGTAATTCAGGACATCA TAAAGGAGATAGCTGGGAGCCAGAGTCTCACAAGCACCATGACGTCGGTA GGGAGTGGCGAACCTGAAAAGAGAAAGAAAGCCACCTTCAAGGTTAGTGG ACGACCCTACTTGAGAAGGGAATATTTTGCCTGCCATGGCTGATGGCTAC ACAGTTGCTTCACAGTGAGCGCTTCTGGTCCTCCAGGTCGTGCTGCTAAT GGGTGTGGACCGTCTGACACAGCAAGCACAAGCTGCTCTCAGACGTACAA TGGAAAAGTATACACAGTCTTGCCGGCTTATTCTCTGCTGCAATAGCTCT GCTAAGGTGTGCACAGTGTTCTCAGCTCTCAGAAACTGCTTTTGCTCTGA GCGACACATGTGGGGTTCGTTTGTTTGTAAGTGCAATTGACAGCAAGTTG CACGTCGCTAATACCCATTGTGTCTTGCTGCACTTCCTTGCTTAAACCTC TGGCCCTTCCTTCTTCAACCGCTATGTATACAACAGGTGATTGAGCCAGT AAGATCAAGGTGTTTAGGAGTGAGAGTGCCTGCTCCTACAGTAAATGACA TATGCCAGGTACAAGCCGTTTACTCTCTTTCACTCGTTTCAACGTAACCT TTTGTCTTCTCTTTTAGGTGTTGCAAAGTATCTCCAAGAAGGAAAGTATT GCTCTGCCTGAGCCACTTGCTGCCAGGTACTGTTGTACCGTTCACGGCAA ATGCTGCTGATTGCACAAATCACGAAACGAGCCAGATTTCATAGCTGCCT AATAGCTTAAATGCACAGAAGTGACTGATGTTTATGGCACAATGGCGTTT CTGTTCTGCTCATGCCACCAATTCTCCTCCCACATTCCTCGCATAACCAC TCTCAGAATGGCAGAGCACAGTGGACGTAACTTGCGCAAGGCAGTGCTGA TGCTAGAGTCTTGCAAGGTCCAGAGCTATCCCTTCAAGACGGATCAGCCT GTACCTCTTGCCGACTGGGAGATGTATATCCAGCAGATAGCAAAGGCATT GACCGTAAGTTTACGTGTTCTCTGCCCTGTCATCTACTTGCGCGCTCCTT TGCTGCGCTGCTTCATAGCTTTACCCACGCTCTCTGATGCGACTTGACCT GCACCTATTTTCAATGGCTTAGCTACTTCATTCCTTGTAACTTGAGTTGC AATAGTATGATGGGTTGAGAGGCTGCGGGTTGCCACAGGTGTACCAATGC TCACTTGGTCACTCTCGTTTTTCTCTTTCTCCGCCTCTCGTCCTGCTTTA TCCTCAGACTGAACAAAACCCACAGTGCCTACTTGAGACGAGAGCCAAGC TATACGAGCTACTTGCTAACTGCATACCAGCTGACATGATATTGCGGACG CTCTCAAAGGAGCTGCATAAGCTGACTGAGGTATTTGCTGTGCAGCAGGA AACAGAGTCAGTCTTCGTGGCTTTTCTCTTCTGAGCAGCCATTTACTCTC CTCTGCAGGATGACATCAGGCATGAGGTAGCACATTGGTCTGCCTTCTAC GAGGCACGACTGCACCAAGGGAGCAAAGAAATATTTCATCTTGAGGCGTT CGTAGCCAAATTCCTCAGCCTGTACAAGGTAAGGGCATCTTCTGCATGTT TGTTTTTCGCTCTCTCACTGCCGTTTTCGTTTCTGCAGAAATACTTGACT GATATGTTTGACTGAATTTGAGCCTTTGAGCCTTGGTGGGCCT
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Coding sequence (CDS) from alignment at C-australica_Contig_1005:14596..17038+

>mRNA_C-australica_Contig_1005.6.1 ID=mRNA_C-australica_Contig_1005.6.1|Name=mRNA_C-australica_Contig_1005.6.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1152bp|location=Sequence derived from alignment at C-australica_Contig_1005:14596..17038+ (Chrysoparadoxa australica CS_1217)
ATGTTGTGGGTTGATAAGTACAGGCCTACCACCCTTGCTAAGATTGAGCT
CCACCCGGGCCTTTCCCAGCGTCTCAAAGCTATGTCAGAGGACGGTGAGA
TTCCTCATTTACTATTCTACGGACCCTCTGGCGCCGGCAAAAAGACGAGG
ATCCTTGCCCTTCTGAAGGAGATATTTGGTCCGGGAGCTGGTAAAGTGCG
TCTGGAGCACAGAACCTTCAAGACACCTTCCAACAGGTCTATTGAGATTA
CAACAGTAGCCAGCAGTTATCATATCGAGATCAGTGCTGCAGATGCTGGG
ATCTACGATAGGTTTGTAATTCAGGACATCATAAAGGAGATAGCTGGGAG
CCAGAGTCTCACAAGCACCATGACGTCGGTAGGGAGTGGCGAACCTGAAA
AGAGAAAGAAAGCCACCTTCAAGGTCGTGCTGCTAATGGGTGTGGACCGT
CTGACACAGCAAGCACAAGCTGCTCTCAGACGTACAATGGAAAAGTATAC
ACAGTCTTGCCGGCTTATTCTCTGCTGCAATAGCTCTGCTAAGGTGATTG
AGCCAGTAAGATCAAGGTGTTTAGGAGTGAGAGTGCCTGCTCCTACAGTA
AATGACATATGCCAGGTGTTGCAAAGTATCTCCAAGAAGGAAAGTATTGC
TCTGCCTGAGCCACTTGCTGCCAGAATGGCAGAGCACAGTGGACGTAACT
TGCGCAAGGCAGTGCTGATGCTAGAGTCTTGCAAGGTCCAGAGCTATCCC
TTCAAGACGGATCAGCCTGTACCTCTTGCCGACTGGGAGATGTATATCCA
GCAGATAGCAAAGGCATTGACCACTGAACAAAACCCACAGTGCCTACTTG
AGACGAGAGCCAAGCTATACGAGCTACTTGCTAACTGCATACCAGCTGAC
ATGATATTGCGGACGCTCTCAAAGGAGCTGCATAAGCTGACTGAGGATGA
CATCAGGCATGAGGTAGCACATTGGTCTGCCTTCTACGAGGCACGACTGC
ACCAAGGGAGCAAAGAAATATTTCATCTTGAGGCGTTCGTAGCCAAATTC
CTCAGCCTGTACAAGGTAAGGGCATCTTCTGCATGTTTGTTTTTCGCTCT
CTCACTGCCGTTTTCGTTTCTGCAGAAATACTTGACTGATATGTTTGACT
GA
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