mRNA_C-australica_Contig_1005.6.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: D7G7C2_ECTSI (Rep_fac_C domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7C2_ECTSI) HSP 1 Score: 471 bits (1211), Expect = 1.660e-162 Identity = 233/355 (65.63%), Postives = 293/355 (82.54%), Query Frame = 3 Query: 126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190 MLWVDK+RP +L +++HP L+ RL AMSEDGEIPHLLFYGP+G+GKKTR+LALLK I+GPGA +VRLEHR+FKTPSNR +E+TTVAS+YHIE+S DAGIYDR+V+QDIIKEIA ++S++++M G G +K+ K KVV+L+GVDRLT+QAQA LRRTME+YT SCRLIL C+S +KVIEPVRSRCLGVRVPAP+ +++C VL S+ +KES+ LP LAAR+A+ S RNLR+AVLM+E+C+VQ YPF DQ V + DWE YI Q+A+ + EQ+P+ LLE R KLYELL NCIPAD+IL+TL++EL K + + EV W+AFYE RLH GSKEI HLEAFVAKF+S+YK Sbjct: 1 MLWVDKHRPKSLDSLDVHPELTTRLAAMSEDGEIPHLLFYGPAGSGKKTRVLALLKRIYGPGAERVRLEHRSFKTPSNRVVELTTVASNYHIEMSPGDAGIYDRYVVQDIIKEIAQNRSISASMG--GGGSDDKKSKIGHKVVVLVGVDRLTKQAQAGLRRTMERYTSSCRLILLCHSPSKVIEPVRSRCLGVRVPAPSESEVCSVLTSVCRKESLTLPPALAARVAKVSKRNLRRAVLMIEACRVQQYPFSEDQEVQMTDWENYITQLAREVVLEQSPRRLLEAREKLYELLTNCIPADIILKTLTRELVKNLDCKLWGEVFKWAAFYEHRLHMGSKEILHLEAFVAKFMSIYK 353
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A835YV35_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV35_9STRA) HSP 1 Score: 471 bits (1211), Expect = 2.820e-162 Identity = 239/368 (64.95%), Postives = 291/368 (79.08%), Query Frame = 3 Query: 126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTS------------VGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDD-IRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190 MLW+DK+RP +L K+++HP L++RLK MS+DGEIPHLLFYGPSGAGK+TRILALLKEIFGPGA +V LEHRTFKTPSNR+IE+TTVAS+YHIE+S DAG YDRFV+Q++IKEIAGS SLT+TM K TFKVVLL GVD LT+QAQAALRRTMEKYT SCRLILCCNS +KVI+PVRSRCL VRVPAP+ +I VL ++++KE +ALP LAAR++ SGRNLR+A+LMLE+CKV+ P +Q V LADWE YI+ +AK +T EQ+PQ L+ R KLYELL NCIPAD++LR L++EL L DD ++HEVAHW+AFY+ RL Q +KE+F LEAFVAKF+ LYK Sbjct: 1 MLWLDKHRPNSLNKLDVHPDLTERLKIMSKDGEIPHLLFYGPSGAGKRTRILALLKEIFGPGAERVHLEHRTFKTPSNRTIELTTVASNYHIEMSPGDAGTYDRFVVQEVIKEIAGSTSLTATMGGNAXXXXXXXXXXXXXXXXXXXXKPTFKVVLLTGVDSLTKQAQAALRRTMEKYTSSCRLILCCNSISKVIDPVRSRCLSVRVPAPSEPEITGVLGAVARKEGVALPAELAARISRASGRNLRRALLMLEACKVEQSPLLANQRVALADWETYIESLAKDITQEQSPQALVAARGKLYELLVNCIPADVVLRRLARELIALMADDALKHEVAHWAAFYDTRLRQSAKEVFQLEAFVAKFMMLYK 368
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A7S2SEJ8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SEJ8_9STRA) HSP 1 Score: 439 bits (1130), Expect = 2.380e-150 Identity = 220/355 (61.97%), Postives = 286/355 (80.56%), Query Frame = 3 Query: 126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190 ML+VDK+RPTTL K++ + L+QRL+ ++ DG++PHL+ YGPSGAGKKTRI ALL+E++G + RL+HR+FKTPSNR++E+TT+AS+YHIE++A+DAGIYDR VIQDIIKEIA S L T G+ +FKVVLLM VDRLT+QAQAALRRTMEKYT SCRLIL C + +KVIEPVRSRCLG+RV APT +++C VL ++++KE + +P LA R+A+ SGRN+R+A+LMLE+ KVQ YPF DQ V L DWE+YI +A+ +TT+Q+PQ L++ R LYELL NCIPAD+I++TL++EL K +D ++HEVAHW+AFYE R+ GSKEIFHLEAFVAKF+SLYK Sbjct: 1 MLFVDKHRPTTLGKLDFNEQLTQRLQGLAADGDLPHLIVYGPSGAGKKTRINALLREMYGSAVERRRLDHRSFKTPSNRTVELTTIASNYHIEMNASDAGIYDRIVIQDIIKEIAQSNPLH---TQEGA--------KSFKVVLLMEVDRLTRQAQAALRRTMEKYTSSCRLILYCTNPSKVIEPVRSRCLGIRVAAPTEDEVCGVLANVARKEKLTMPPELALRIAKLSGRNVRRALLMLEATKVQQYPFTVDQTVQLPDWELYIATLAQEMTTDQSPQKLIKAREMLYELLTNCIPADVIMKTLTRELCKSLDDQLKHEVAHWAAFYEHRIVIGSKEIFHLEAFVAKFMSLYK 344
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A4D9D7D4_9STRA (AAA domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7D4_9STRA) HSP 1 Score: 438 bits (1126), Expect = 1.150e-149 Identity = 219/356 (61.52%), Postives = 280/356 (78.65%), Query Frame = 3 Query: 126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIA-LPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190 MLWVDK+RPTTLAK++ H L+ RL+A+SEDGE+PHLLFYGP GAGKKTRI+ALL+++FG G K RLEH+TFKTP+ R+IE+T +AS++H EI+AA+AG DRFV+Q++IKEIA S + + M G +KVV+L VDRL++QAQAALRRTMEKYT +CRLILCCNS+++VIEPVRSRCLG+RV AP+ IC +L +SKKES LPE LA R+A+ SGRNLR+A+LMLE+C+VQ +PF +Q V + DWE YI ++A LT EQ+PQ L+ R LYELL NCIP+D+IL+TL +EL +D ++HEV HW+AFYE R+ GSKEIFHLEAFVAKF++LYK Sbjct: 1 MLWVDKHRPTTLAKMDYHEDLTARLEALSEDGEVPHLLFYGPPGAGKKTRIMALLRQVFGAGVEKTRLEHKTFKTPTKRTIELTILASAFHQEINAAEAGSGDRFVVQEVIKEIAQSYNPAAAMGQAGG--------RAYKVVILTEVDRLSRQAQAALRRTMEKYTAACRLILCCNSASRVIEPVRSRCLGIRVAAPSHESICAILNKVSKKESCGVLPEALAMRIAQTSGRNLRRALLMLEACRVQQHPFTAEQEVKVPDWEEYIAKLAVLLTEEQSPQRLVLARDMLYELLTNCIPSDVILKTLLRELLPKLDDQLKHEVVHWAAFYEHRVRVGSKEIFHLEAFVAKFMALYK 348
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A7S2PRB1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PRB1_9STRA) HSP 1 Score: 423 bits (1087), Expect = 7.900e-144 Identity = 209/352 (59.38%), Postives = 269/352 (76.42%), Query Frame = 3 Query: 126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLS 1181 MLWVDK+RP L ++ P +++RL+A+SED IPHLLFYGPSG+GKKTRI ALL+ IFGP A ++RL+ RTF TP+ R++EI + S+ HIE+S DAG+YDR+VIQD+IKE+A +++LTS + E FKVV+L VDRL++QAQA+LRRTMEKYT SCRLILCC + +KVIEPVRSRCLG+RV AP+ +DIC+VL+ +S+KE LP+ LA +A SGRN+R+A+LMLE+CKVQ DQPV DWE+YI Q+A EQ+PQ LL R KLYELL NCIPAD+IL+TL+ EL K +D ++HEV W+AFYE RL QGSK+IFHLEAF+AKF++ Sbjct: 1 MLWVDKHRPNRLDSLDYAPNITKRLQALSEDKNIPHLLFYGPSGSGKKTRINALLRAIFGPTADRLRLDKRTFTTPTKRTVEINMICSNVHIELSPGDAGLYDRYVIQDVIKEMASNKALTSGTITTKKDGSEPNAGTEFKVVVLNEVDRLSKQAQASLRRTMEKYTSSCRLILCCANQSKVIEPVRSRCLGIRVAAPSHDDICRVLKLVSRKEQFTLPDELAINIARESGRNIRRAILMLEACKVQQNILTADQPVQKTDWELYISQLAMDCAREQSPQKLLAAREKLYELLINCIPADVILKTLALELMKNLDDSLKHEVIEWAAFYEHRLCQGSKDIFHLEAFIAKFMA 352
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: F0XVP2_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVP2_AURAN) HSP 1 Score: 421 bits (1083), Expect = 3.310e-143 Identity = 215/355 (60.56%), Postives = 271/355 (76.34%), Query Frame = 3 Query: 126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190 MLWVDK+RP L K+ H LS+RL ++ DG+IPHLLFYGPSGAGKKTRI+ALL+ ++G GA K RLEHR FKTP+N++IE+TTVAS+YHIEI+ +DAG DR+V+Q++IKEIA S SL + + +KVVLL+ VDRLT+QAQA LRRTMEK T SCRLILCCN+ +KVI+P+RSRCLG+RV APT +I VL ++ +E + LP LAAR+A+ S RNLR+A+L LE CKVQ YPF Q VPL DWE Y+ IA + EQ+PQ LL TR KLYELL+ CIPAD+IL+TL++EL K +D+++ EV W+AFYE R+ QG+KEIFHLEAFVAKF+ LYK Sbjct: 1 MLWVDKHRPLELGKMSYHGELSERLATLAADGDIPHLLFYGPSGAGKKTRIMALLRALYGAGAEKQRLEHRDFKTPTNKAIEVTTVASNYHIEINPSDAGNNDRYVVQEVIKEIAQSGSL----------HKGDKGRVGYKVVLLVEVDRLTRQAQAGLRRTMEKCTSSCRLILCCNNPSKVIDPLRSRCLGIRVAAPTEAEIVAVLDDVAARERLDLPPALAARIAKASKRNLRRAILSLEECKVQQYPFDAAQAVPLPDWEQYVVAIASDIAREQSPQRLLATRDKLYELLSKCIPADVILKTLARELLKNLDDEMKAEVLKWAAFYEHRITQGNKEIFHLEAFVAKFMCLYK 345
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A7S4V0A9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4V0A9_9STRA) HSP 1 Score: 416 bits (1070), Expect = 7.090e-141 Identity = 205/369 (55.56%), Postives = 278/369 (75.34%), Query Frame = 3 Query: 126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDG-EIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPE--------KRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQ-----SYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190 MLWVDK+RP L ++ H ++RL ++S D +PHLLFYGPSGAGKKTR++ALL+ ++GPGA ++RL+ RTF TP+ R++EI ++S+YHIEIS DAG+ DRFV+Q++IKE+A ++++ S ++ G K+K FKVV+L+ VDRL++QAQAALRRTMEKY+ SCRLILCCN+ +KVIEPVRSRCLG+RVPAP+ +DIC VL+ +S+KESI LP+ LA +A S RN+R+A+LMLESC VQ DQPV DWE+YI Q+A +T EQ+PQ L+ R KLYELL NCIPAD+I++TL+ EL K ++ ++HEV W+AFYE R+ GSK+IFHLEAF+AK++++YK Sbjct: 1 MLWVDKHRPNRLNQLSYHAATTERLTSLSADPTSMPHLLFYGPSGAGKKTRVMALLRALYGPGAERLRLDKRTFTTPTKRTVEINLISSNYHIEISPGDAGLNDRFVVQEVIKEMAANRNIASGSGTLSMGAKTDAEAAGNTKKKGVDFKVVVLVEVDRLSRQAQAALRRTMEKYSASCRLILCCNNQSKVIEPVRSRCLGIRVPAPSHDDICSVLKKVSRKESITLPDELAVNIARESSRNMRRALLMLESCHVQRRDAHGNSLSADQPVQKTDWELYISQLASEITREQSPQRLMAAREKLYELLINCIPADVIIKTLALELTKNLDESLKHEVIEWAAFYEHRIAMGSKDIFHLEAFIAKYMAIYK 369
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A7S2U7C3_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U7C3_9STRA) HSP 1 Score: 413 bits (1062), Expect = 1.160e-139 Identity = 207/369 (56.10%), Postives = 278/369 (75.34%), Query Frame = 3 Query: 126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSE-DGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSV--------GSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYP-----FKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190 MLWVDK+RPT L + HP + RL++++ +PHLLFYGP GAGKKTRI ALL+ I+GPGA ++RL+ RTF TP+ R+++I ++S+YHIE+S DAGI DRFV+QD+IKE+A ++SL+S +T+V S K+ + FKVV+L+ VD+L++QAQAALRRTMEKY+ SCRLILCCN+ +KVI+PVRSRCLG+R+ APT +DICQVL++ ++KESI LP+ LA +A S RN+R+A+LMLESC VQS QPV DWE+YI Q+A +T EQ+PQ L+ R KLYELL NCIPAD+I++ L+ EL K +D ++HEV W+AFYE R+ GSK+IFHLEAFVAK++++YK Sbjct: 1 MLWVDKHRPTQLKNLSYHPDTTARLESLAAAPANMPHLLFYGPPGAGKKTRINALLRAIYGPGAERLRLDKRTFTTPTKRTVDINMISSNYHIEMSPGDAGINDRFVVQDVIKEMAANKSLSSAVTAVTTHNASQESSSSGTKKTQIDFKVVVLVEVDKLSRQAQAALRRTMEKYSTSCRLILCCNNQSKVIDPVRSRCLGIRIAAPTHDDICQVLKATARKESIILPDELAVNIARQSSRNMRRAMLMLESCHVQSRDATGGTLSAHQPVQKTDWELYITQLASEITREQSPQRLMAAREKLYELLINCIPADVIIKNLAFELMKNLDDSLKHEVIEWAAFYEHRIATGSKDIFHLEAFVAKYMAIYK 369
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: A0A8J2WW47_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WW47_9STRA) HSP 1 Score: 406 bits (1044), Expect = 2.990e-137 Identity = 203/355 (57.18%), Postives = 270/355 (76.06%), Query Frame = 3 Query: 126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKTDQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYK 1190 MLWVDK+RPT L K+ H L +RL +M+EDG+IPHLLFYGPSGAGKKTR+ LLK ++G GA K RLEHR FKTP+N++IE+TTVAS+YHIE++ +DAG DRFV+Q++IKEIA S S+ + G+ ++K FKV+L++ VDRL++QAQA LRRTMEK + +CRL++ C + +KVI+P+RSRCLG+R+ AP+ +I VL + +KE + LP+ LAAR+A+ SGRNLR+A+L LE CKV YPF PVP DWE+YI+ IA+ + EQ+P L+ TR KLYELLA CIPAD+IL+ L EL +D+++ +V +AFYE R+ QGSKEIFHLEAFVAKF+ +YK Sbjct: 1 MLWVDKHRPTALEKLSYHAELGERLGSMAEDGDIPHLLFYGPSGAGKKTRVQCLLKALYGAGAEKQRLEHREFKTPTNKTIEVTTVASNYHIEMNPSDAGNNDRFVVQEVIKEIAQSGSV---LAKTGA----QKKGPAFKVILMVEVDRLSRQAQAGLRRTMEKSSSACRLVMICTNPSKVIDPIRSRCLGIRIAAPSEEEIVGVLHEVCEKERLTLPDELAARIAKSSGRNLRRAILALEECKVAQYPFNPSMPVPQPDWEVYIKAIAQDICREQSPARLVATRDKLYELLAKCIPADVILKELCAELVSKLDDELKPQVMACAAFYEHRVQQGSKEIFHLEAFVAKFMVIYK 348
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Match: B7FSY5_PHATC (Predicted protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FSY5_PHATC) HSP 1 Score: 406 bits (1044), Expect = 3.560e-137 Identity = 210/384 (54.69%), Postives = 276/384 (71.88%), Query Frame = 3 Query: 126 MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGE-IPHLLFYGPSGAGKKTRILALLKEIFGPGAGKVRLEHRTFKTPSNRSIEITTVASSYHIEISAADAGIYDRFVIQDIIKEIAGSQSLTSTMTSVGSGEPEKRKKATFKVVLLMGVDRLTQQAQAALRRTMEKYTQSCRLILCCNSSAKVIEPVRSRCLGVRVPAPTVNDICQVLQSISKKESIALPEPLAARMAEHSGRNLRKAVLMLESCKVQSYPFKT-DQPVPLADWEMYIQQIAKALTTEQNPQCLLETRAKLYELLANCIPADMILRTLSKELHKLTEDDIRHEVAHWSAFYEARLHQGSKEIFHLEAFVAKFLSLYKVRASSACLFFALSLPFSFLQKYLTDMF 1271 MLWVDKYRP L + H +SQRL +++ + E +PHL FYGP+GAGKKTRI ALL ++GPGA +++L+ RTF TP+ R++E+ + S+YHIEIS DAG+ DRFVIQD+IKE+A ++++ ++ TS K ATFK V+L+ VDRL++QAQAALRRTMEKY +CRLIL CN+ +KVIEPVRSRCLG+RV APT ++IC+VL+S+S ES LP+ LA +A S RN+R+A+LMLE+C VQ T DQPV DWE+YI Q+A +T EQ PQ L+ R KLYELL NCIPA++I++TL+KEL K +D ++ EV W+AFYE R+ GSKEIFHLEAFVAKF+++YK KYL D+F Sbjct: 1 MLWVDKYRPVKLDDLSYHDTISQRLSSLASNPESMPHLFFYGPAGAGKKTRITALLGSLYGPGASRLKLDKRTFTTPTKRTVELNMITSNYHIEISPGDAGLNDRFVIQDVIKEMASNKNVGASATS----SERKSGAATFKTVVLVEVDRLSRQAQAALRRTMEKYASTCRLILVCNNQSKVIEPVRSRCLGIRVAAPTEDEICKVLKSVSINESFMLPDELAINIARESSRNVRRAILMLEACYVQKRGALTKDQPVQKTDWELYINQLAVEITREQTPQRLMAAREKLYELLVNCIPANVIIKTLAKELMKNLDDSLKREVIEWAAFYEHRISLGSKEIFHLEAFVAKFMAVYK--------------------KYLNDLF 360 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1005.6.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1005.6.1 >prot_C-australica_Contig_1005.6.1 ID=prot_C-australica_Contig_1005.6.1|Name=mRNA_C-australica_Contig_1005.6.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=384bp MLWVDKYRPTTLAKIELHPGLSQRLKAMSEDGEIPHLLFYGPSGAGKKTRback to top mRNA from alignment at C-australica_Contig_1005:14596..17038+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1005.6.1 ID=mRNA_C-australica_Contig_1005.6.1|Name=mRNA_C-australica_Contig_1005.6.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2443bp|location=Sequence derived from alignment at C-australica_Contig_1005:14596..17038+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1005:14596..17038+ >mRNA_C-australica_Contig_1005.6.1 ID=mRNA_C-australica_Contig_1005.6.1|Name=mRNA_C-australica_Contig_1005.6.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1152bp|location=Sequence derived from alignment at C-australica_Contig_1005:14596..17038+ (Chrysoparadoxa australica CS_1217)back to top |