mRNA_C-australica_Contig_1004.4.1 (mRNA) Chrysoparadoxa australica CS_1217
You are viewing an mRNA, more information available on the corresponding polypeptide page
Overview
Homology
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Match: A0A7S2R7Y6_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R7Y6_9STRA) HSP 1 Score: 457 bits (1177), Expect = 3.220e-145 Identity = 262/488 (53.69%), Postives = 333/488 (68.24%), Query Frame = 1 Query: 73 VPNYVVVPMPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLAKILAPAGGGELKVGSPMAITVDDMEDYQLFLAADEQGKIMVPGEVSSGAEPVEASAAAPAAAGTQAAAAVVEGRTVPLEYLFSPAARHMAQSKGVDASSIAGTGKGGRITKSDLVHALNSGKTFPTLG----SAPAVAAASDHATNPAVAXXXXXXXXXXXXXXXXAVPSATASPPAAAPQPRSHLMNFDFGPVSSKGSFIDIPASQITKVIARRLTESKATVPHYYVSVECEIDSLLGLRKKLATEADTKVSVNDLVIKSAALALRDVPEVNASW--SPKGRKINDSIDVSVAVATPAGLITPIVTDVDKKGLAEINSNVVDLAARAKDNKLKPEEFQGGTFTISNLGMFGINEFSAVINPPQSSIMAVGGGVRRVLPGKGVDADGCRNPPRVATVMTTRLSCDRRVVDEAVAGQFLQAFQFYVQSPS 1518 VP++ VV MPALSPTME G+I+ W PGD + G+ L EVETDKA V +E QDD VLAK+L PAGG E VG P+AITV D ++ F AD G + +P S+G P SA + A VEGR V E+L PAA H+A+S+G+DA+++AG+GKGGRITK D+++AL SG TFP L S PA+ AA++ +T A P+A +P A++ P ++ PV+ F D PAS + KVIARRLTESKATVPH YV++E E+D+LL RK L E D VSVNDLVI++ ALALRDVPE NAS+ + ++ NDSIDVSVAVATP GLITPIVT VD++GL++I+S V DLA RA++ KL PEE+QGGTFT+SNLGMFGI+EFSAVINPPQ+ IMA+GGGV+RV+ AD + PRVAT MT ++SCDRRV+DEA A Q+LQAF+ YV+ P+ Sbjct: 35 VPDFSVVHMPALSPTMERGSISSWAKQPGDSIEAGETLAEVETDKAVVGFEYQDDAVLAKVLDPAGGTEFTVGDPIAITVVDHAAFEAFQTADAAGLVSLP---SAGNTPAAVSATXXXXSTASAPTGPVEGRQVTDEFLLMPAAAHLARSRGIDATALAGSGKGGRITKGDILNALASGMTFPALATGAVSRPALTAAAEAST---------------------AAPAA--APLASSTVPTGETLSMPATPVTD-APFEDAPASSMRKVIARRLTESKATVPHLYVAMESELDALLRFRKYLKDECDVSVSVNDLVIRAVALALRDVPEANASFDAAQSAKRFNDSIDVSVAVATPTGLITPIVTGVDRRGLSDISSAVRDLAGRAQEGKLMPEEYQGGTFTVSNLGMFGISEFSAVINPPQACIMAIGGGVKRVV------ADSMDSEPRVATSMTVKMSCDRRVIDEATASQYLQAFRSYVEEPT 489
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Match: A0A835ZCE2_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCE2_9STRA) HSP 1 Score: 457 bits (1176), Expect = 5.290e-141 Identity = 287/504 (56.94%), Postives = 333/504 (66.07%), Query Frame = 1 Query: 7 YTRRQTPGGRSVSDLAHRGL--SGVPNYVVVPMPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLAKILAPAGGGELKVGSPMAITVDDMEDYQLFLAADEQGKI-MVPGEVSSGAEPVEASAAAPAAAGTQAAAAVVE---GRTVPLEYLFSPAARHMAQSKGVDASSIAGTGKGGRITKSDLVHALNSGKTFPTLGSAPAVAAASDHATNPAVAXXXXXXXXXXXXXXXXAVPSATASPPAAAPQPRSHLMNFDFGPVSSKGSFIDIPASQITKVIARRLTESKATVPHYYVSVECEIDSLLGLRKKLATEADTKVSVNDLVIKSAALALRDVPEVNASWSPK--GRKINDSIDVSVAVATPAGLITPIVTDVDKKGLAEINSNVVDLAARAKDNKLKPEEFQGGTFTISNLGMFGINEFSAVINPPQSSIMAVGGGVRRVLPGKGVDADGCRNPPRVATVMTTRLSCDRRVVDEAVAGQFLQAF 1494 Y R+Q G + HR S P++ VV MPALSPTME GTIT W PG +APGDVLC+VETDKATVA+E+Q+DGVLAKIL GGGE+KVGSP+A+TV+D Y F AD G + GE + A ++ APAA RTVP E+ +SPAARH+AQSKG+D S+AG+G+GGR+TKSDL+ AL SG FP LG A AT PA A XXXXXXXXXXX DIPA+ I KVIA+RL +SKATVPH YVS ECE+D+LL LRK+LA KVSVNDLVI++AALALRDVPE NA WS + + ++DVSVAVATP GLITPIVT ++GL I++ V DLA RAK+ KLKPEEFQGGTFTISNLGMFGI EFSAVINPPQ+ IMAVGGGVRRV+PG A G R PPRVATVMT +LS DRRVVDEAVA QFLQ F Sbjct: 55 YLRQQ---GLQDGNAVHRRWLSSEAPSFTVVNMPALSPTMETGTITKWHAQPGTALAPGDVLCDVETDKATVAFEVQEDGVLAKILVQEGGGEVKVGSPVAVTVEDEAAYDAFTKADAAGSLPYFSGEDAPSA--TDSQPQAPAAXXXXXXXXXXXXXANRTVPEEFAYSPAARHLAQSKGIDIVSLAGSGRGGRVTKSDLIKALASGTEFPKLG------AGRHAATEPAAAAAPTGXXXXXXXXXXXXXXXXXXXXXXXX----XXXXXXXXXXXXXAADHTDIPANNIRKVIAKRLAQSKATVPHLYVSAECELDALLALRKELAARHGAKVSVNDLVIRAAALALRDVPEANAQWSARDGAAALQRAVDVSVAVATPTGLITPIVTRAAERGLLNISAAVRDLAGRAKEGKLKPEEFQGGTFTISNLGMFGIAEFSAVINPPQACIMAVGGGVRRVVPGARDAATGARAPPRVATVMTAKLSADRRVVDEAVAAQFLQQF 543
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Match: A0A7S2ALJ9_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2ALJ9_9STRA) HSP 1 Score: 443 bits (1140), Expect = 3.210e-139 Identity = 261/492 (53.05%), Postives = 325/492 (66.06%), Query Frame = 1 Query: 82 YVVVPMPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLAKILAPAGGGELKVGSPMAITVDDMEDYQLFLAADEQGKIMVP---GEVSSGA-EPVEASAAAPAAAGTQAAAAVVEGRTVPLEYLFSPAARHMAQSKGVDASSIAGTGKGGRITKSDLVHALNSGKTFPTLGS--APAVAAASDHATNPAVAXXXXXXXXXXXXXXXXAVPSATASPPAAAPQPRSHLMNFDFGPV--SSKGSFIDIPASQITKVIARRLTESKATVPHYYVSVECEIDSLLGLRKKLATEADTKVSVNDLVIKSAALALRDVPEVNASWSPKGRKI--NDSIDVSVAVATPAGLITPIVTDVDKKGLAEINSNVVDLAARAKDNKLKPEEFQGGTFTISNLGMFGINEFSAVINPPQSSIMAVGGGVRRVLPGKGVDADGCRNPPRVATVMTTRLSCDRRVVDEAVAGQFLQAFQFYVQSPSQTM 1527 YV V MPALSPTME+GTI +W PG+E+A GDVLC+VETDKAT+A+EMQDD VLAK L PAG + +G+ +AITVDDM Y+ FLAAD G+I + G + GA + VE + ++ AA + RTV E+L +PAARHM++SKG+D +AGTGKGGRITK D++HA+N G T P L S AP+VAA T+PA PS +++P D P +S + D PAS + KVIA RLT+SKA PH YVS+E +D ++ LRK L E D VSVNDL+I+ A LALRDVPE NASW K + + N ++D+SVAVATP GL+TPIVT VD KGL EIN V DLA RA+D KL PEE+QGG+FTISNLGMFG++EFSA+IN PQ+ IMAVGGG RR++ K D +G + TVMT RLSCD RVVD AVA QFLQAFQ Y++ P T+ Sbjct: 77 YVTVVMPALSPTMESGTIAEWSKQPGEEIAAGDVLCQVETDKATMAFEMQDDAVLAKQLVPAGDESINIGTAVAITVDDMAAYEAFLAADAAGEISIDANDGPAAGGAVDEVETTTGTVSSE----AAMIASTRTVADEFLLTPAARHMSESKGLDVRGLAGTGKGGRITKGDVIHAINEGVTLPLLASSSAPSVAAV----TSPA--------------------PSVSSTPAXXXXXXXXXXXMMDLPPAECTSGAGYSDSPASGMRKVIASRLTQSKAEAPHAYVSIEARLDPIMKLRKTLK-EGDVNVSVNDLIIRCAGLALRDVPEANASWDAKTQSVVTNPNVDISVAVATPTGLMTPIVTGVDGKGLGEINGAVRDLATRARDGKLMPEEYQGGSFTISNLGMFGVSEFSAIINMPQACIMAVGGGERRLVQKK--DEEGLS----IETVMTARLSCDSRVVDSAVAAQFLQAFQGYMEQPKLTV 533
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Match: A0A6H5L3X9_9PHAE (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3X9_9PHAE) HSP 1 Score: 437 bits (1123), Expect = 1.420e-136 Identity = 263/506 (51.98%), Postives = 334/506 (66.01%), Query Frame = 1 Query: 16 RQTPGGRSVSDLAHRGLSGVPNYVVVPMPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLAKILAPAGGGELKVGSPMAITVDDMEDYQLFLAADEQGKIMVPG------EVSSGAEPVEASAAAPAAAGTQAAAAVVEGRTVPLEYLFSPAARHMAQSKGVDASSIAGTGKGGRITKSDLVHALNSGKTFPTLGSAPAVAAASDHATNPAVAXXXXXXXXXXXXXXXXAVPSATASPPAAAPQPRSHLMNFDFGPVSSKGSFIDIPASQITKVIARRLTESKATVPHYYVSVECEIDSLLGLRKKLATEADTKVSVNDLVIKSAALALRDVPEVNASWSPKGRKINDSIDVSVAVATPAGLITPIVTDVDKKGLAEINSNVVDLAARAKDNKLKPEEFQGGTFTISNLGMFGINEFSAVINPPQSSIMAVGGGVRRVLPGKGVDADGCRNPPRVATVMTTRLSCDRRVVDEAVAGQFLQAFQFYVQSP 1515 R T G + R L+ ++ VV MPALSPTME+GT+T+W +PGDE++ GDV+C+VETDKATVA+++QDDGVLA+I++ AG GE+ VGSP+A+ V+D + Y F+ AD G++ + + R+VP +LFSPAARHMAQSKG+DASS+ GTGKGGRITK+DLV A+ G FP A A AA+S XXXXXXXXXXXX VPS SS G F+D PA+ I K+ A+RLT+SKA VPH YVS+ CE+D L+ RK L E D KVSVND++I+SAALALRDVPE NA WS R+ ++SID+SVAVATP GLITPIVTD D++GL+ I+ V DLA RA+D +LKPEEFQGG+FT+SNLGMFGINEFSAVIN PQ+ I+AVGGG +V PG+ + PRV + +T RLS DRRVVDEA+A Q LQ+F+ Y+++P Sbjct: 69 RATGFGMLLPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDGDAYAAFVKADAAGEVDFAALGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXSNLPERSVPEAFLFSPAARHMAQSKGIDASSLEGTGKGGRITKTDLVLAMAKGVEFP----AAAKAASSQXXXXXXXXXXXXXXXXXXXXVAPPVVPS------------------------SSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEVDGLMAFRKTLQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQSSESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAG-----DKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETP 541
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Match: A0A7S2LCD3_9STRA (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2LCD3_9STRA) HSP 1 Score: 417 bits (1072), Expect = 4.300e-130 Identity = 265/497 (53.32%), Postives = 334/497 (67.20%), Query Frame = 1 Query: 34 RSVSDLAHRGLSG-VPNYVVVPMPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLAKILAPAGGGELKVGSPMAITVDDMEDYQLFLAADEQGKIMVPGEVSSGAEPVEASAAAPAAAGTQAAAAVVEGRTVPLEYLFSPAARHMAQSKGVDASSIAGTGKGGRITKSDLVHALNSGKTFPTLGSAPAVAAASDHATNPAVAXXXXXXXXXXXXXXXXAVPSATASPPAAAPQPRSHLMNFDFGPVSSKGSFIDIPASQITKVIARRLTESKATVPHYYVSVECEIDSLLGLRKKLATEADTKVSVNDLVIKSAALALRDVPEVNASWSPKGRKI--NDSIDVSVAVATPAGLITPIVTDVDKKGLAEINSNVVDLAARAKDNKLKPEEFQGGTFTISNLGMFGINEFSAVINPPQSSIMAVGGGVRRVLPGKGVDADGCRNPPRVATVMTTRLSCDRRVVDEAVAGQFLQAFQFYVQSP 1515 R S A R LS +P++ VV +PALSPTME+G I DWK+ G PGDVLCEVETDKATV +E QDDGVLAKIL P+G ++KVG+P+ I V+D +D F AD V +VSS + A A+ T+A R + +Y+ SPAARH++QSKG+DA+ + GTGKGGR+TK D++ L+S P + AV XXXXXXXXXXXXXXXXA S A P+P GSF D+P + + KVIA+RLTESK VPH+Y SVE E+D +L LRKKL + + KVSVNDL+IKS+ALALRD+ VNA+++ K +I +D +D+SVAVATP GLITPIVT DK+GL+ I+S V DLA RA+D KLKPEE+QGGTFTISNLGMFGI+EFSAVINPPQ++I+AVGGG R++P V+ + PP+V T+MT RLS DRRVVDEA A F++AFQ Y+ P Sbjct: 15 RRQSQSAWRALSSSLPSHEVVGLPALSPTMESGNIADWKIEEGQAFGPGDVLCEVETDKATVDFEAQDDGVLAKILKPSGSQDIKVGAPVCIVVEDEDDVASF--ADYN----VLDDVSSADDETPAVVASSDTV-TEAVVTPSPSRDIEDQYILSPAARHLSQSKGLDATVLTGTGKGGRVTKGDVLLNLDSLPPLPVVS---------------AVXXXXXXXXXXXXXXXXXAATPVYLSE-AEVPEPA--------------GSFEDVPNNNMRKVIAKRLTESKRDVPHFYTSVEIELDEVLALRKKLVNDHEVKVSVNDLIIKSSALALRDISAVNATYNDKKSEIVPSDDVDISVAVATPTGLITPIVTGADKRGLSSISSCVKDLATRARDGKLKPEEYQGGTFTISNLGMFGIDEFSAVINPPQAAILAVGGGSPRIIPTPYVEGAEEQEPPKVKTIMTARLSADRRVVDEATAAVFMKAFQEYLSKP 474
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Match: A0A7S4SV80_9STRA (Acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4SV80_9STRA) HSP 1 Score: 410 bits (1054), Expect = 3.720e-126 Identity = 242/496 (48.79%), Postives = 323/496 (65.12%), Query Frame = 1 Query: 64 LSGVPNYVVVPMPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLAKILAPAGGG-ELKVGSPMAITVDDMED---YQLFLAADEQGKIMVPGEVSSGAEPVEASAAAPAAAGTQAAAAVVEGRTVPLEYLFSPAARHMAQSKGVDASSIAGTGKGGRITKSDLVHALNSGKTFPTLGSAPAVAAASDHATNPAVAXXXXXXXXXXXXXXXXAVPSATASPPAAAPQPRSHLMNFDFGPVSSKGSFIDIPASQITKVIARRLTESKATVPHYYVSVECEIDSLLGLRKKLATEADTKVSVNDLVIKSAALALRDVPEVNASWSPK--GRKINDSIDVSVAVATPAGLITPIVTDVDKKGLAEINSNVVDLAARAKDNKLKPEEFQGGTFTISNLGMFGINEFSAVINPPQSSIMAVGGGVRRVLPGKGVDADGCRNPPR--VATVMTTRLSCDRRVVDEAVAGQFLQAFQFYVQSPSQTM 1527 LS P + + PMPALSPTME GTI+ W + G+E + GD+LCE+ETDKATV +E QDDGVLAKIL +L +G P+ + V++ ++ ++ F+ D G G + A EA AAA A T A +VV R V E++ P+ARH++QS+GVDA+ + G+GKGGR+TK D++ AL +G P L S+ +A D PA A A P+ AS P A P +S++GS+ D+P + + KVIA+RLTESK VPH+Y S+E E+D +L LRK L ++ D KVSVNDL+I+S+ALALRDVPEVNA+ K + ++ID+S+AVATP GLITPIV D+KGL++I ++V DLA RA++ KLKPEE+QGGTF ISNLGMFGI+EFSAVINPPQ++I+AVGGG +R++P VD + P+ + TVMT RLS DRRVVDEA A FL AF+ Y+ P M Sbjct: 110 LSSYPPHTLFPMPALSPTMETGTISKWNKSEGEEFSAGDILCEIETDKATVDFEAQDDGVLAKILREGSNAVDLPIGVPICVVVEEADELAAFKDFVLDDGAG-----GAAAPTAAQEEAPAAASAPTPTAQAESVVN-RDVADEFVLMPSARHLSQSRGVDATVLVGSGKGGRVTKGDVLAALANGTEMPPLTSSVLASAPVD---TPAAATQAA------------AAPAKAASSPVVATIPE----------ISTQGSYEDVPNNNMRKVIAKRLTESKRDVPHFYTSMEVELDEVLSLRKMLVSKHDVKVSVNDLIIRSSALALRDVPEVNATIDSKTGNLRARENIDISIAVATPTGLITPIVPHTDQKGLSDITNSVRDLAGRAREGKLKPEEYQGGTFCISNLGMFGIDEFSAVINPPQAAILAVGGGTKRIVPAPYVDGVAKEDQPKPVIRTVMTARLSADRRVVDEATAALFLSAFKHYLSKPHLLM 574
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Match: A0A812V1C5_SYMMI (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812V1C5_SYMMI) HSP 1 Score: 406 bits (1044), Expect = 7.130e-126 Identity = 239/482 (49.59%), Postives = 310/482 (64.32%), Query Frame = 1 Query: 91 VPMPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLAKILAPAGGGELKVGSPMAITVDDMEDYQLFLAADEQGKIMVPGEVSSGAEPVEASAAAPAAAGTQAAAAVVEGRTVPLEYLFSPAARHMAQSKGVDASSIAGTGKGGR-ITKSDLVHALNSGKTFPTLGSAPAVAAASDHATNPAVAXXXXXXXXXXXXXXXXAVPSATASPPAAAPQPRSHLMNFDFGPVSSKGS-FIDIPASQITKVIARRLTESKATVPHYYVSVECEIDSLLGLRKKLATEADTKVSVNDLVIKSAALALRDVPEVNASWSP-KGRK-INDSIDVSVAVATPAGLITPIVTDVDKKGLAEINSNVVDLAARAKDNKLKPEEFQGGTFTISNLGMFGINEFSAVINPPQSSIMAVGGGVRRVL---PGKGVDADGCRNPPRVATVMTTRLSCDRRVVDEAVAGQFLQAFQFYVQSP 1515 +PMP+LSPTM GTI+ W APG+ + GD+LC+VETDKA+V +E+QDDGVLAKIL AGG E++ G P+A+ V+D DYQ FL +P + A P A++ A + T ++AA V L SPAARHM QS+ +D S++ G+ KGGR ITK D++ A+ +G P A++ PA A +A ASPP PQ + + P S+ G ++D+P S + KVIA+RL+ESK TVPH Y ++ECEID LL +RK L + VSVND+VIKS A+ALRDVPE N W P +GR ND++D+SVAVATP GLITPI+T D+ GL+ INS V DLA RA+D KLKP+E+QGGTFTISNLG+FGI+ FSAVINPPQ+ I+AVGGG+ RV+ PGK PR+ T MT +LS DRRVVDEA A QFLQ F++Y+ +P Sbjct: 50 LPMPSLSPTMTHGTISSWNKAPGEALKAGDILCDVETDKASVGFEVQDDGVLAKILVDAGGAEVQCGQPIALMVEDDADYQTFLK--------LPADAYPVAVPAAAASPPAAPSHTPSSAAPSFAGHVQL----SPAARHMVQSRSLDVSAVHGSSKGGRVITKGDVIQAVKAGTARP--------GASTQTRATPATAV------------------AAVASPPTPIPQTAATVPATVQDPSSNIGGLYVDVPNSNMRKVIAKRLSESKQTVPHLYTTIECEIDDLLAMRKALKKDFGVNVSVNDVVIKSVAMALRDVPECNGKWVPAEGRPAFNDAVDISVAVATPNGLITPILTSADQLGLSAINSKVKDLATRARDGKLKPQEYQGGTFTISNLGLFGISSFSAVINPPQACILAVGGGIERVVAPAPGK--------EQPRIVTTMTVQLSSDRRVVDEATASQFLQVFKYYLSNP 485
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Match: A0A7S2XXU4_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXU4_9STRA) HSP 1 Score: 391 bits (1005), Expect = 1.810e-120 Identity = 243/476 (51.05%), Postives = 307/476 (64.50%), Query Frame = 1 Query: 91 VPMPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLAKILAPAGGGELKVGSPMAITVDDMEDYQLFLAADEQGKIMVPGEVSSGAEPVEASAAAPAAAGTQAAAAVVEGRTVPLEYLFSPAARHMAQSKGVDASSIAGTGKGGRITKSDLVHALNSGKTFPTLGSAPAVAAASDHATNPAVAXXXXXXXXXXXXXXXXAVPSATASPPAAAPQPRSHLMNFDFGPVSSKGS-FIDIPASQITKVIARRLTESKATVPHYYVSVECEIDSLLGLRKKLATEADTKVSVNDLVIKSAALALRDVPEVNASWSPKGRKINDSIDVSVAVATPAGLITPIVTDVDKKGLAEINSNVVDLAARAKDNKLKPEEFQGGTFTISNLGMFGINEFSAVINPPQSSIMAVGGGVRRVLPGKGVDADGCRNPPRVATVMTTRLSCDRRVVDEAVAGQFLQAFQFYVQSP 1515 + MPALSPTME+GT+ W + G E PGD LCEVETDKATVA+E+Q+ +KVG +A+ V+D + + F A + + ++S GA AS+AA A QA + + +L PAAR MA+S G+DAS +AGTG+GGR+TK D+V AL +G P L A H T+PA A XXXXXXXXX +P +++ D P+ S F DIPA+ I KV A+RLTESKATVPHYYVS E EID+ L LRK +A E + K SVNDLVI+SAALALRD EVNA W+ +++D+S+AVATP GLITPIVT+ DKKGL +I+ NV DLA RA+DNKL PEEF GGTFTISNLGMFGI+EFSAVIN PQ++IMAVG G R+V+P V+ PPRVAT+MT LSCDRRV++EA AG+F+ +F+ Y+ P Sbjct: 15 IAMPALSPTMESGTVAKWLVQEGGEFGPGDALCEVETDKATVAFEVQEXXXXXXXXXXXXXX-VKVGEMVALAVEDADQFAAFQKAGPEALANI--DLSGGAS---ASSAAVEDASPQAGSXXXXXXSASPSFLM-PAARFMAESMGLDASGLAGTGRGGRVTKGDVVEALEAGIKLPPL-------AKPAHTTSPAAAAAGEVPAXXXXXXXXXXXXXXXXTPASSS--------TVDLPPLQESSSPFEDIPANNIKKVTAKRLTESKATVPHYYVSTEVEIDAALKLRKDMAKEHEVKFSVNDLVIRSAALALRDNAEVNAKWNGSEVVPEETVDISIAVATPNGLITPIVTNADKKGLTDISGNVRDLATRARDNKLAPEEFMGGTFTISNLGMFGISEFSAVINLPQAAIMAVGTGARKVVPSPRVEGQEEIPPPRVATMMTATLSCDRRVINEAAAGKFMNSFKHYLSQP 468
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Match: D7FM36_ECTSI (Dihydrolipoamide S-acetyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM36_ECTSI) HSP 1 Score: 412 bits (1060), Expect = 7.010e-120 Identity = 253/500 (50.60%), Postives = 316/500 (63.20%), Query Frame = 1 Query: 16 RQTPGGRSVSDLAHRGLSGVPNYVVVPMPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLAKILAPAGGGELKVGSPMAITVDDMEDYQLFLAADEQGKIMVPGEVSSGAEPVEASAAAPAAAGTQAAAAVVEGRTVPLEYLFSPAARHMAQSKGVDASSIAGTGKGGRITKSDLVHALNSGKTFPTLGSAPAVAAASDHATNPAVAXXXXXXXXXXXXXXXXAVPSATASPPAAAPQPRSHLMNFDFGPVSSKGSFIDIPASQITKVIARRLTESKATVPHYYVSVECEIDSLLGLRKKLATEADTKVSVNDLVIKSAALALRDVPEVNASWSPKGRKINDSIDVSVAVATPAGLITPIVTDVDKKGLAEINSNVVDLAARAKDNKLKPEEFQGGTFTISNLGMFGINEFSAVINPPQSSIMAVGGGVRRVLPGKGVDADGCRNPPRVATVMTTRLSCDRRVVDEAVAGQFLQAFQFYVQSP 1515 R T G + R L+ ++ VV MPALSPTME+GT+T+W +PGDE++ GDV+C+VETDKATVA+++QDDGVLA+I++ AG GE+ VGSP+A+ V+D + Y F+ AD G +SKG+DASS+ GTGKGGRITK+DLV AL G FP A AAS A XXXXXXXXXXXXXXXX PS SS G F+D PA+ I K+ A+RLT+SKA VPH YVS+ CE+D L+ RK L E D KVSVND++I+SAALALRDVPE NA WS R+ +SID+SVAVATP GLITPIVTD D++GL+ I+ V DLA RA+D +LKPEEFQGG+FT+SNLGMFGINEFSAVIN PQ+ I+AVGGG +V PG+ + PRV + +T RLS DRRVVDEA+A Q LQ+F+ Y+++P Sbjct: 845 RATGIGMQLPRQTARALTSGVDFTVVNMPALSPTMESGTVTEWHKSPGDELSAGDVICDVETDKATVAFDVQDDGVLARIISEAGSGEVSVGSPVAVIVEDADAYAAFVKADAAG-----------------------------------------------------ESKGIDASSLEGTGKGGRITKADLVLALAKGVEFPA-----AAKAASSQAXXXXXXXXXXXXXXXXXXXXXXXXPS------------------------SSSGDFVDEPANNIKKITAKRLTQSKAEVPHLYVSMACEVDGLMAFRKALQKEHDVKVSVNDIIIRSAALALRDVPEANAKWSGGARQSGESIDISVAVATPTGLITPIVTDADQRGLSNISGKVRDLATRARDRQLKPEEFQGGSFTVSNLGMFGINEFSAVINMPQACILAVGGGAPKVKPGREAG-----DKPRVCSEVTVRLSADRRVVDEAIAAQLLQSFKHYMETP 1257
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Match: A0A7S2RBN8_9STRA (Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RBN8_9STRA) HSP 1 Score: 379 bits (973), Expect = 7.890e-116 Identity = 241/486 (49.59%), Postives = 313/486 (64.40%), Query Frame = 1 Query: 58 RGLSGVPNYVVVPMPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLAKILAPAGGGELKVGSPMAITVDDMEDYQLFLAADEQGKIMVPGEVSSGAEPVEASAAAPAAAGTQAAAAVVEGRTVPLEYLFSPAARHMAQSKGVDASSIAGTGKGGRITKSDLVHALNSGKTFPTLGSAPAVAAASDHATNPAVAXXXXXXXXXXXXXXXXAVPSATASPPAAAPQPRSHLMNFDFGPVSSKGSFIDIPASQITKVIARRLTESKATVPHYYVSVECEIDSLLGLRKKLATEADTKVSVNDLVIKSAALALRDVPEVNASWSPKGRKINDSIDVSVAVATPAGLITPIVTDVDKKGLAEINSNVVDLAARAKDNKLKPEEFQGGTFTISNLGMFGINEFSAVINPPQSSIMAVGGGVRRVLPGKGVDADGCRNPPRVATVMTTRLSCDRRVVDEAVAGQFLQAFQFYVQSP 1515 R LS P + VV MPALSPTME GTI+ WK+ G PGDVL E+ETDKAT+ +E QD+G+LA+IL P G E+ VG+P+ I V++ D F A+ Q +V V+ E V T AA A V+ R V +E++ SPAARH++QSKG+DA+ +AGTGKGGR+TK DL+ AL SG + PTL P XXXXXXXXXXX +A P A P + ++GSF D+P + + KVIA+RLTESK+TVPH+Y +V+ +D +L LRK K+SVND+++++AALALRDVPEVN S D+IDVS+AVATP GLITPIV + GL +I++ + DLA RA++NKLKPEE+QGGTF ISNLGMFGI EFSAVINPPQ++I+AVGGG+ ++P K +N P++ T+MT RLS DR VVDE A FLQ F+ Y+ +P Sbjct: 43 RSLSSYPPHEVVEMPALSPTMEMGTISSWKVEEGGSFGPGDVLAEIETDKATMDFEAQDEGILARILHP-GMEEIPVGTPIGIVVEEESDVSAF--ANYQ---VVVAAVAVAEEEVT----------TIAAPAAVQ-RQVGVEHVLSPAARHISQSKGLDATGLAGTGKGGRVTKGDLLQALASGVSMPTLSQTPTX--------------XXXXXXXXXXXQAAHTAVAAAVVPVKAVPVEM----------IMTEGSFEDVPNNNMRKVIAKRLTESKSTVPHFYTTVQIPLDEVLKLRKTFPV----KISVNDVIVRAAALALRDVPEVNQS--------EDNIDVSIAVATPGGLITPIVPNTHTLGLHQISTKITDLATRARENKLKPEEYQGGTFCISNLGMFGITEFSAVINPPQAAILAVGGGIPTIVPSKDQ-----KNKPQLQTLMTARLSADRSVVDEPTASLFLQIFRRYLTNP 470 The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1004.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25 ZOOMx 1POSITION0
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1004.4.1 >prot_C-australica_Contig_1004.4.1 ID=prot_C-australica_Contig_1004.4.1|Name=mRNA_C-australica_Contig_1004.4.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=480bp MPALSPTMEAGTITDWKMAPGDEVAPGDVLCEVETDKATVAYEMQDDGVLback to top mRNA from alignment at C-australica_Contig_1004:4756..12571+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_C-australica_Contig_1004.4.1 ID=mRNA_C-australica_Contig_1004.4.1|Name=mRNA_C-australica_Contig_1004.4.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=7816bp|location=Sequence derived from alignment at C-australica_Contig_1004:4756..12571+ (Chrysoparadoxa australica CS_1217)back to top Coding sequence (CDS) from alignment at C-australica_Contig_1004:4756..12571+ >mRNA_C-australica_Contig_1004.4.1 ID=mRNA_C-australica_Contig_1004.4.1|Name=mRNA_C-australica_Contig_1004.4.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1440bp|location=Sequence derived from alignment at C-australica_Contig_1004:4756..12571+ (Chrysoparadoxa australica CS_1217)back to top |