Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 610 |
| Hectar predicted targeting category | other localisation |
| Exons | 4 |
| Cds size | 306 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586738.1960058-UTR-C-australica_Contig_1004:15996..16174 | 1682586738.1960058-UTR-C-australica_Contig_1004:15996..16174 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1004 15997..16174 - |
| 1682586738.2383935-UTR-C-australica_Contig_1004:16629..16695 | 1682586738.2383935-UTR-C-australica_Contig_1004:16629..16695 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1004 16630..16695 - |
| 1682586738.2540503-UTR-C-australica_Contig_1004:16768..16828 | 1682586738.2540503-UTR-C-australica_Contig_1004:16768..16828 | Chrysoparadoxa australica CS_1217 | UTR | C-australica_Contig_1004 16769..16828 - |
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1682586738.2072136-CDS-C-australica_Contig_1004:16174..16300 | 1682586738.2072136-CDS-C-australica_Contig_1004:16174..16300 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1004 16175..16300 - |
| 1682586738.2168114-CDS-C-australica_Contig_1004:16374..16477 | 1682586738.2168114-CDS-C-australica_Contig_1004:16374..16477 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1004 16375..16477 - |
| 1682586738.2262945-CDS-C-australica_Contig_1004:16552..16629 | 1682586738.2262945-CDS-C-australica_Contig_1004:16552..16629 | Chrysoparadoxa australica CS_1217 | CDS | C-australica_Contig_1004 16553..16629 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_C-australica_Contig_1004.10.1 >prot_C-australica_Contig_1004.10.1 ID=prot_C-australica_Contig_1004.10.1|Name=mRNA_C-australica_Contig_1004.10.1|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=102bp
MRRRKRRRQPLLASSRPGVSSGTGTGTGLPGLSATATNGATTTSRPGSPT
TPVTSGANTRTPTSPTAAVVVLPSALPCTRGLTGRAREFGLQIRGMRSGF
E* back to topmRNA from alignment at C-australica_Contig_1004:15997..16828- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_C-australica_Contig_1004.10.1 ID=mRNA_C-australica_Contig_1004.10.1|Name=mRNA_C-australica_Contig_1004.10.1|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=832bp|location=Sequence derived from alignment at C-australica_Contig_1004:15997..16828- (Chrysoparadoxa australica CS_1217)
ACAGCCAGAAGCAGGCCTGGATCACCGACTACCCCGGTGACTACAGGTGC
CAGTACAAGGGTAAGTCCACGGTGTGCATTGACTTGCCACTAGGAGCTGC
GGAGTGTTTCTTACGGCTTGTGCCTCTCCTCAGACCCAAACTTCTCCCAC
TGCTGCGGTGGTGGTGGTCCCCAGTGCGCTCCCATGTACCGCAAGCTGGA
TGAGGAGGAGAAAGAGGAGGAGACAGCCACTGTTGGCGAGCTCGAGACCA
GGCGTTTCCTCGGGGACTGGGACAGGGTAAGCTGGCCACCGATCTTCTCA
CAGGTCGCGAAATCTCTCTCTGACTTGCCACCTTTCTCTTGTCACTCTCA
GAACTGGCCTGCCTGGGTTGAGTGCGACAGCGACCAATGGTGCAACGACA
ACAAGCAGGCCTGGATCACCGACTACCCCGGTGACTTCAGGTGCCAATAC
AAGGGTGAGTCTGCTGTGGCCCTCCCCTTGCTTCACCTTGAAACCTCTCC
TAAAACCTTTTCTCTCCCCCTCTCACAGACCCCTACTTCTCCCACTGCTG
CGGTGGTGGTGCTCCCGAGTGCGCTCCCATGTACTAGAGGACTAACTGGG
AGGGCTAGAGAATTTGGTTTACAAATAAGGGGCATGCGCAGCGGGTTCGA
GTGAGCGACACGCACGCATGCCTTCGGGGGCATTGTTCGAGTAGTTCGAT
ATCATTTCAAGCAGCTCGGTGCATTAGGCGCGTCGGGCATTTTGGCCACT
CCTGGTCTTATGTATTTTTATGTTTGTATGGGAGAAATCAATCATGGATA
AATCAACGATGGATTCAGATCCTTACACCATT back to topCoding sequence (CDS) from alignment at C-australica_Contig_1004:15997..16828- >mRNA_C-australica_Contig_1004.10.1 ID=mRNA_C-australica_Contig_1004.10.1|Name=mRNA_C-australica_Contig_1004.10.1|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=306bp|location=Sequence derived from alignment at C-australica_Contig_1004:15997..16828- (Chrysoparadoxa australica CS_1217)
ATGAGGAGGAGAAAGAGGAGGAGACAGCCACTGTTGGCGAGCTCGAGACC
AGGCGTTTCCTCGGGGACTGGGACAGGAACTGGCCTGCCTGGGTTGAGTG
CGACAGCGACCAATGGTGCAACGACAACAAGCAGGCCTGGATCACCGACT
ACCCCGGTGACTTCAGGTGCCAATACAAGGACCCCTACTTCTCCCACTGC
TGCGGTGGTGGTGCTCCCGAGTGCGCTCCCATGTACTAGAGGACTAACTG
GGAGGGCTAGAGAATTTGGTTTACAAATAAGGGGCATGCGCAGCGGGTTC
GAGTGA back to top
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