mRNA_C-australica_Contig_1004.1.3 (mRNA) Chrysoparadoxa australica CS_1217

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_C-australica_Contig_1004.1.3
Unique NamemRNA_C-australica_Contig_1004.1.3
TypemRNA
OrganismChrysoparadoxa australica CS_1217 (Chrysoparadoxa australica CS_1217)
Homology
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: D7FLL8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLL8_ECTSI)

HSP 1 Score: 354 bits (909), Expect = 1.540e-109
Identity = 246/633 (38.86%), Postives = 328/633 (51.82%), Query Frame = 2
Query:  137 LRGGEQESEGLS-GGETFTCEHIEATGVEQDTAFSAGG---DAATVMLRHQGVVLV-EEECLTPGSKQGKVAYAITSDGCLQVGSLDHKEGVEDRVRAARMLVHLLNTMFKHPKMIAKIGSNDAARELCHLVAEDAASLVKQCRAGLLSGGTTLRALFKRTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAA--CFPK--RLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVK----WATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDR-LGHLPS---SRGQLQAGLV--------------------------------GLP-----ALSLQSTARREDLVTIPWRGWLRRARLLPWGDSLEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGVDVDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQG-DAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSLSPLPHRGSWGGVLK 1870
            LRGG  E + L  GGE    +    T      A S G     A        GV LV E    T GSK  ++  +        + ++         V  A      +    +      K G  +A +E    VA +  +      A +   G  +R     T LP G+P +V PEY+R+  W  +QD+S+ +RG LATQAV EGMGVG+AGS+ LAAT  WM R GA  IGGL+FT + S + G NIK WRL AD + D+ L LEM A    F +  R L LIC+ASV KA  GVAGGAT AAI EH++I NNIAD+ AK  AQHTV+SL+G+G++  F + ++V         W  + +LT+ H+L N   MRTLALRSLNP R  +L + Y+ + LG       +RG  Q                                    G P      LS  + ARRE ++ +P  GW R   L PWGD L+I++GV  ++LV + DDLLW+T LY  E  MVGV V Y+PLG +  T +  ALR DA  E+++     A++++  +++  D IP G D V R L+LR V E  LR  + E+  FRKALV EGWDL RV+L   P  G WG + K
Sbjct:   47 LRGGSDEGDALHVGGEEEKVKRETPTATRASAADSEGEAWPGAEEEGTPFGGVALVTERSTATGGSKDRQLPASTAPSPPPHLPTIPPPSRENTAVANASAEPRRVLQGVRRCAGDLKTGLVEATKE----VARETRAAAAAAGACVARAGVAVRGGLMNTFLPAGYPGSVRPEYVRYRCWDILQDLSSHLRGVLATQAVLEGMGVGRAGSTPLAATLQWMARDGASMIGGLLFTSVASANFGVNIKTWRLFADTSNDIGLALEMLAPLPAFREGGRFLRLICIASVFKAACGVAGGATGAAITEHWAIDNNIADIGAKNGAQHTVASLLGLGLSVWFARAVSVGGSASGSRVWGWYAVLTLVHLLANYAAMRTLALRSLNPTRASLLVTEYLGQALGSTEGRSGTRGSEQXXXXXXXXXXXXXXXXXGGEERKGPALDWMGRIRDQGSPPESVAVLSPFAAARRERILVLP--GWFRA--LKPWGDFLQIHVGVPVRALVGEADDLLWLTSLYHDERSMVGVQVSYKPLGARMETTVNLALREDASPEDRLHAMFQANVIQHLVVRDPDGIPHGEDGVDRTLFLRKVTEEALRVTRKEFPAFRKALVREGWDLSRVTLGGGPWVGRWGSLAK 671          
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A7S0EV14_9CRYP (Hypothetical protein n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0EV14_9CRYP)

HSP 1 Score: 228 bits (580), Expect = 6.890e-64
Identity = 149/430 (34.65%), Postives = 233/430 (54.19%), Query Frame = 2
Query:  566 SGGTTLRALFKRTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGWLRRARLLPWGDSLEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGVDVDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQGDAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSLSPLPHRGSW 1855
            SG   L+ +   T LP G+P ++P EY ++  +  +QD+++++RG L+TQ + EGMGVGKAG +SLAAT  WM R G+  +GGL+FT   S S G +IK WRL AD+  D++L L+M A  +P+  L +IC++SV KA+ GV+ GA +AAIV+H++   NIADV AK  AQHT+ S++ + + F F +  N S    WA+F++LT  HV      MRTLA        LR+L  + +DR+  LP           G  +++    A+ + L+ +PW          P+  S E+  GV   +++     L  +  L+  E  MV    D+     K   VI  A   ++   + +  Y+ AH++ R L   S +  + ++++R+          L + +S ++   K L+  GWDLQ+VSL      G W
Sbjct:   53 SGMLKLKRIMYATFLPSGYPASLPDEYTKYQAYNLLQDLTSNLRGILSTQKILEGMGVGKAGVTSLAATMQWMARDGSSMLGGLLFTAFASSSFGIHIKRWRLFADLINDVALLLDMLAPAYPELFLPIICLSSVFKAMCGVSAGACNAAIVQHWATRGNIADVGAKTGAQHTIVSVLALPLGFLFAQAANSSLQSLWASFVVLTSIHVWACYSMMRTLA--------LRILTRSQLDRI--LPKLLFDDNEKSKGTSSMTPACLAKTDKLLWLPWAED-------PFC-SFELVFGVSLSTILRSGIPLKKLISLFEGEKFMVAQADDHPREAKKPKLVICVA--EESTPRDYLRAYITAHVIAREL-NFSTKPTEQESLIRQA---------LEKMRSSYQGVEKRLMDAGWDLQQVSLGQPAWVGRW 452          
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: W7U3D2_9STRA (Uncharacterized protein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U3D2_9STRA)

HSP 1 Score: 229 bits (585), Expect = 1.670e-63
Identity = 162/436 (37.16%), Postives = 226/436 (51.83%), Query Frame = 2
Query:  581 LRALFKRTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHL-PSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGWLRRARLLPWGDS----LEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGV------DVDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQGDAVLRKLYLRHVMEVNLRRAKSEWKEFRKA-------LVAEGWDLQRVSLSP 1834
            L+ L     LP+GFP +V PEYLR+  W  +QD+ST +RG LATQA+ EG+GVG+ G++ LAAT  W+ R GA  + GLVFT   S + G N K WRL AD  +D+ +TL+M A  FPK  L  IC+ASV K++ G+A GA++  IVEH +  NN+A+V AKG AQHT  SL G+G    F +V N SP   W  + LLTV H+  N   MR LA  S+N  RL VL + + +    L P+   + +  +V +         R   L T  ++   RRA      D+      I LGVR K L    + L  +  L+  E  M+ +      ++  R +  K    I  ALR DA     +   L A L+ R   +         AV RK    ++ E+      S ++E  +        L  +GW+L+RV LSP
Sbjct:  132 LKTLLHTVFLPVGFPSSVAPEYLRYQQWNVVQDLSTYLRGILATQAILEGVGVGREGATPLAATLQWITRDGASMMSGLVFTSFLSTNFGVNAKSWRLFADFMVDIGITLDMLAPLFPKNFLLCICLASVCKSLCGIAAGASNGNIVEHMARTNNLAEVLAKGGAQHTAVSLFGLGFGMWFARVANQSPRRVWTAYTLLTVIHLTANYAAMRVLAFTSINRRRLNVLLTAFRENASVLSPAEVARRETIIVDV------GRWRPPKLWTALFQKGKRRATAELAKDAHAPIWNIRLGVRVKDLTRFAEGLTELQRLFSQEQYMLNMVNVFDGELPTRKVTRKIQ--IAVALREDATNLTLLKACLHADLIARRGFE---------AVKRKKGTENI-EIISSVISSTYQELCQCFPNMVQGLRRQGWNLERVLLSP 549          
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A813KE75_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KE75_POLGL)

HSP 1 Score: 191 bits (485), Expect = 3.660e-50
Identity = 140/420 (33.33%), Postives = 216/420 (51.43%), Query Frame = 2
Query:  578 TLRALFKRTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVD-RLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGWLRRARLLPWGDSLEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGVD--VDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQGDAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSL 1828
            +L+A      LP+G+PH+V  EY  +  W T+Q M + +RG LATQA+  G+GVGK G+++LAAT  W+++ G+G +GGL F    S     N+K WRL ADVA ++ LTL++ A       L +ICVA+V KA+ GV+ GAT AA+  HF++ +N+ADV AK  +Q T  +L+G+     F  V N SP   W  F+LLT+ H   N   +R+L L +L+P+RL +L   +VD +    PS+  ++          +++  A  E L+++   G    A   P      + +GVR        D         RS  ++ GV+  +  R  G     V+ A L   A  + ++  +L A L  R L      +P   + L + Y     E++    +    +F  ++   GWDLQR  L
Sbjct:   72 SLKASLAGAFLPVGYPHSVSKEYFSYQAWDTVQAMCSYLRGVLATQALLRGVGVGKEGATALAATIIWVLKDGSGMVGGLGFATFCSVGFDVNVKTWRLFADVANNVGLTLDLLAPMAGDYFLLVICVANVFKAMCGVSAGATKAALTAHFALRDNMADVQAKEGSQETAVTLMGLIAGSWFAMVANESPATVWTAFVLLTLLHTFANYTGVRSLLLPTLSPSRLWLLCCAWVDSKQASSPSADSRM----------TIEHVASLEPLLSLALPGSRGLAAAGP------VRVGVRWADAFGGED----AEQFDRSWKVLGGVEQYLLARKKGAGTPEVV-AVLLSGADEKVEIRAFLHAALAHRRLCS----VPGSSSWLEESYA----ELS---GRGGIDDFTASVAKLGWDLQRGVL 459          
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A8J9WIB8_9CHLO (RUS1 family protein C16orf58 homolog n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WIB8_9CHLO)

HSP 1 Score: 187 bits (475), Expect = 4.610e-49
Identity = 136/450 (30.22%), Postives = 214/450 (47.56%), Query Frame = 2
Query:  563 LSGGTTLRALFK---RTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQST--ARREDLV---TIPWRGWLRRARLLPWGDSLEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGVDVDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQGDAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSLSPLPHRGSWGGVLKPRESED 1888
            +S G+  ++L +   +  LP  +P +V P+Y+ F +W ++Q + + +RG + + A+  G+GVGK  +S L A   + +R  AG  GG++F       L A  K WRL AD+  +    L++ +  FP   L L C+ S+ +A++GVAGGAT AA+ +HFS   N AD++AK  +Q T ++LVGM +   FL+    SPV  WA F+LLTV H+  N+  +R+L L SLN +R+ +L       L H  +++       V      LQ T  A+ E L+      +  W+    L  W  S  + +G R   L   ++  L   D      +++ +D   R             LRRDA  E+ +  Y+  +L+            Q D  + +                EW  FR  L   GW L R++L     RG+WG  L+     D
Sbjct:   31 ISNGSQDQSLLRWLRKGFLPDKYPDSVTPDYIDFQIWDSIQALCSYVRGMICSNAILTGIGVGKEAASPLVAVFQFFLRDLAGMCGGVLFAFAQGSELDAYAKQWRLFADIFNNFGYALDLLSPVFPDHFLLLACLGSLARAVTGVAGGATRAALTQHFSKAGNAADISAKEGSQETATTLVGMVVGMLFLRSAADSPVAVWAVFLLLTVLHIYANVRAVRSLQLTSLNRSRMDIL-------LQHCSATK-------VNGNGRVLQPTEVAKIEPLLPPTVTEFLKWILCVHL--WRPSKRLVIGARLSEL--PLERTLARMDSNADMKLIIALDKSGREAS--------VVLRRDADSEDVLKAYVQGYLLLHSTAPMEQRHRQVDKWMAE----------------EWPAFRGMLQRSGWALDRIALCSSSWRGAWGNALRHHHHHD 438          
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A6P5RF21_PRUAV (protein root UVB sensitive 3 isoform X1 n=12 Tax=Prunus TaxID=3754 RepID=A0A6P5RF21_PRUAV)

HSP 1 Score: 177 bits (450), Expect = 1.430e-45
Identity = 122/435 (28.05%), Postives = 220/435 (50.57%), Query Frame = 2
Query:  572 GTTLRALFKRTL---LPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGW-LRRARLLPWGDSLEINLGVRCKSLVE-DVDDLLWITDLYRSESIMVGVDVDYRPLGPKFNTVILAALRRDAGREEQVFVYL--LAHLVRRHLLQQSDEIPQGDAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSLSPLPHRGSW 1855
            G+    +++R L   +P GFP +V P+Y+ F VW  +Q +ST IR  L+TQA+   +GVG+  ++ + AT  W +R   G +GG++FT     +L +N K WRL+AD+  DL + +++ +  FP   + ++C+ S+ ++ +GVA GAT AA+ +HF++ +N AD++AK  +Q TV+++VGM +     ++    P+  W +F+ LT+ H+  N   +R LAL SLNP R  +L  +++ R G +                LS +  ++ E ++ +    W L++  L+     + ++LGVR  SL   ++ DLL     +  ++        Y  +  K N  I+      A    Q F++   +A+L+ +H +  S+     D                      ++EF + L   GW  +R+    +  + +W
Sbjct:   41 GSRFHHVWRRILEAFVPEGFPSSVTPDYVPFQVWDLLQGLSTYIRTMLSTQALLGAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQSNAADISAKEGSQETVATMVGMALGMLLARITMGHPLAIWFSFLSLTMFHMYANYMAVRCLALNSLNPERCSILLQHFM-RTGQV----------------LSPEQVSKMEHILPVWASSWSLKKTELI----HVRVSLGVRVSSLNHLELRDLLHFAGSHYKKA-------KYLLMERKGNICIVMHKDSTATDVLQSFLHANAMANLIDKHRILHSESQTWMD--------------------KHYEEFIQKLKVSGWKTERLLSPTIVWKANW 427          
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A7S0AE69_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0AE69_9STRA)

HSP 1 Score: 177 bits (450), Expect = 7.060e-45
Identity = 99/236 (41.95%), Postives = 148/236 (62.71%), Query Frame = 2
Query:  581 LRALFKRTLLPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKR-LLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSP-VVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDR 1282
            +R+    T LP G+PH  PP YL + +W   QD++T +R  LATQ V EG+G GK G+++L+A+ N++ R G G +  L+FT + +    ++IK WRLLAD+A+D+ +TLE+ A  FPK   L LI +A++ KA+ GVA GA   AI  H+S  ++I+D+ AK  AQHTV+  +G+  A  F   ++ +P  V W  + LLT  H+  N  CMR +A  SLN AR  +L S + ++
Sbjct:  123 IRSALCSTFLPSGYPHQTPPGYLSYSMWSWAQDLTTQMRAVLATQRVLEGVGAGKEGATALSASLNFIFRDGCGMLATLLFTSVAASKFRSDIKRWRLLADIAVDIGITLEVAAPLFPKTWFLPLISIATMFKAVCGVAAGAAGGAINLHWSRGSDISDINAKFGAQHTVTGGLGLLSAALFATSVSHAPSTVTWLLYALLTAFHIYANARCMRLVAFDSLNTARTDLLTSQFFEQ 358          
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A024TJI4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TJI4_9STRA)

HSP 1 Score: 172 bits (436), Expect = 1.190e-44
Identity = 98/237 (41.35%), Postives = 136/237 (57.38%), Query Frame = 2
Query:  575 TTLRALFKRTL----LPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNY 1273
            T +  L +R L    LP G+P +V  EYL F +W T Q M + +RG LATQ+V E +GVGK   + LAA   W++R G+G +GGL F  +      AN+K WRL ADV  D  LTL+M A  FP  +  ++CV+SV KA+ GVA GAT +++  HF+ H N+AD+ AK  +Q T  ++VG+     F   +N S    W  FI LT  HV+ N   + TL + +LN  R  +    Y
Sbjct:   66 TNIVQLLRRELFDMFLPFGYPDSVSDEYLTFQMWDTCQAMCSYLRGVLATQSVLESVGVGKDSVTPLAAALQWVMRDGSGMLGGLFFAYIVGPKFDANVKFWRLYADVINDFGLTLDMLAPFFPLYVTEILCVSSVCKAMCGVAAGATRSSLTAHFAKHENMADIAAKEGSQETFVNMVGLVSGMYFANAVNQSRTTVWMAFIFLTGFHVVANYLAVTTLCIPTLNVQRAYLAIQRY 302          
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A6P5R639_PRUAV (protein root UVB sensitive 3 isoform X2 n=2 Tax=Prunus TaxID=3754 RepID=A0A6P5R639_PRUAV)

HSP 1 Score: 173 bits (439), Expect = 1.360e-44
Identity = 100/305 (32.79%), Postives = 175/305 (57.38%), Query Frame = 2
Query:  572 GTTLRALFKRTL---LPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGW-LRRARLLPWGDSLEINLGVRCKSL 1474
            G+    +++R L   +P GFP +V P+Y+ F VW  +Q +ST IR  L+TQA+   +GVG+  ++ + AT  W +R   G +GG++FT     +L +N K WRL+AD+  DL + +++ +  FP   + ++C+ S+ ++ +GVA GAT AA+ +HF++ +N AD++AK  +Q TV+++VGM +     ++    P+  W +F+ LT+ H+  N   +R LAL SLNP R  +L  +++ R G +                LS +  ++ E ++ +    W L++  L+     + ++LGVR  SL
Sbjct:   41 GSRFHHVWRRILEAFVPEGFPSSVTPDYVPFQVWDLLQGLSTYIRTMLSTQALLGAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLLSPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQSNAADISAKEGSQETVATMVGMALGMLLARITMGHPLAIWFSFLSLTMFHMYANYMAVRCLALNSLNPERCSILLQHFM-RTGQV----------------LSPEQVSKMEHILPVWASSWSLKKTELI----HVRVSLGVRVSSL 324          
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Match: A0A251R4P1_PRUPE (Uncharacterized protein n=1 Tax=Prunus persica TaxID=3760 RepID=A0A251R4P1_PRUPE)

HSP 1 Score: 173 bits (438), Expect = 1.410e-44
Identity = 100/304 (32.89%), Postives = 172/304 (56.58%), Query Frame = 2
Query:  572 GTTLRALFKRTL---LPIGFPHTVPPEYLRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKGAGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLLSLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSLVGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPARLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWRGWLRRARLLPWGDSLEINLGVRCKSL 1474
            G+    L++R L   +P GFP +V P+Y+ F VW  +Q +ST IR  L+TQA+   +GVG+  ++ + AT  W +R   G +GG++FT     +L +N K WRL+AD+  DL + +++ +  FP   + ++C+ S+ ++ +GVA GAT AA+ +HF++ +N AD++AK  +Q TV+++VGM +     ++    P+  W +F+ LT+ H+  N   +R LAL SLNP R  +L  +++ R G +                LS +  ++ E ++ +    W  +   L     + ++LGVR  SL
Sbjct:   41 GSRFHHLWRRILEAFVPEGFPSSVTPDYVSFQVWDLLQGLSTYIRTMLSTQALLSAIGVGEKSATVIGATFQWFLRDLTGMLGGILFTFYQGSNLDSNAKMWRLVADLMNDLGMLMDLVSPLFPSAFVFVVCLGSISRSFTGVASGATRAALTQHFALQSNAADISAKEGSQETVATMVGMALGMLLARITMGHPLAIWFSFLSLTMFHMYANYMAVRCLALNSLNPQRCSILLQHFM-RTGQV----------------LSPEQVSKMEHILPVWASSWSSKKTELI---HVRVSLGVRVSSL 324          
The following BLAST results are available for this feature:
BLAST of mRNA_C-australica_Contig_1004.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLL8_ECTSI1.540e-10938.86Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S0EV14_9CRYP6.890e-6434.65Hypothetical protein n=1 Tax=Hanusia phi TaxID=303... [more]
W7U3D2_9STRA1.670e-6337.16Uncharacterized protein n=2 Tax=Nannochloropsis ga... [more]
A0A813KE75_POLGL3.660e-5033.33Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A8J9WIB8_9CHLO4.610e-4930.22RUS1 family protein C16orf58 homolog n=1 Tax=Cocco... [more]
A0A6P5RF21_PRUAV1.430e-4528.05protein root UVB sensitive 3 isoform X1 n=12 Tax=P... [more]
A0A7S0AE69_9STRA7.060e-4541.95Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
A0A024TJI4_9STRA1.190e-4441.35Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A6P5R639_PRUAV1.360e-4432.79protein root UVB sensitive 3 isoform X2 n=2 Tax=Pr... [more]
A0A251R4P1_PRUPE1.410e-4432.89Uncharacterized protein n=1 Tax=Prunus persica Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
C-australica_Contig_1004contigC-australica_Contig_1004:198..3098 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Chrysoparadoxa australica CS_1217 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLL8
Preferred nameC16orf58
PFAMsDUF647
Model size1993
Max annot lvl2759|Eukaryota
Hectar predicted targeting categorysignal peptide
Exons10
Evalue8.93e-111
EggNOG OGsKOG4249@1|root,KOG4249@2759|Eukaryota
Descriptionresponse to UV-B
Cds size1884
COG categoryS
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_C-australica_Contig_1004.1.3prot_C-australica_Contig_1004.1.3Chrysoparadoxa australica CS_1217polypeptideC-australica_Contig_1004 244..3035 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586738.284145-UTR-C-australica_Contig_1004:197..2431682586738.284145-UTR-C-australica_Contig_1004:197..243Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1004 198..243 +
1682586738.3813412-UTR-C-australica_Contig_1004:3035..30981682586738.3813412-UTR-C-australica_Contig_1004:3035..3098Chrysoparadoxa australica CS_1217UTRC-australica_Contig_1004 3036..3098 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682586738.2937577-CDS-C-australica_Contig_1004:243..5221682586738.2937577-CDS-C-australica_Contig_1004:243..522Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1004 244..522 +
1682586738.3030012-CDS-C-australica_Contig_1004:604..7541682586738.3030012-CDS-C-australica_Contig_1004:604..754Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1004 605..754 +
1682586738.3123016-CDS-C-australica_Contig_1004:839..10151682586738.3123016-CDS-C-australica_Contig_1004:839..1015Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1004 840..1015 +
1682586738.3215578-CDS-C-australica_Contig_1004:1134..13101682586738.3215578-CDS-C-australica_Contig_1004:1134..1310Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1004 1135..1310 +
1682586738.3306198-CDS-C-australica_Contig_1004:1393..16951682586738.3306198-CDS-C-australica_Contig_1004:1393..1695Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1004 1394..1695 +
1682586738.3402424-CDS-C-australica_Contig_1004:1807..19261682586738.3402424-CDS-C-australica_Contig_1004:1807..1926Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1004 1808..1926 +
1682586738.3477566-CDS-C-australica_Contig_1004:2030..21211682586738.3477566-CDS-C-australica_Contig_1004:2030..2121Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1004 2031..2121 +
1682586738.355528-CDS-C-australica_Contig_1004:2223..22941682586738.355528-CDS-C-australica_Contig_1004:2223..2294Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1004 2224..2294 +
1682586738.363336-CDS-C-australica_Contig_1004:2377..26951682586738.363336-CDS-C-australica_Contig_1004:2377..2695Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1004 2378..2695 +
1682586738.3717077-CDS-C-australica_Contig_1004:2833..30351682586738.3717077-CDS-C-australica_Contig_1004:2833..3035Chrysoparadoxa australica CS_1217CDSC-australica_Contig_1004 2834..3035 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_C-australica_Contig_1004.1.3

>prot_C-australica_Contig_1004.1.3 ID=prot_C-australica_Contig_1004.1.3|Name=mRNA_C-australica_Contig_1004.1.3|organism=Chrysoparadoxa australica CS_1217|type=polypeptide|length=628bp
MRSGAYAAALHSLLLGTLGPSAPPLFACLRLRGGEQESEGLSGGETFTCE
HIEATGVEQDTAFSAGGDAATVMLRHQGVVLVEEECLTPGSKQGKVAYAI
TSDGCLQVGSLDHKEGVEDRVRAARMLVHLLNTMFKHPKMIAKIGSNDAA
RELCHLVAEDAASLVKQCRAGLLSGGTTLRALFKRTLLPIGFPHTVPPEY
LRFLVWYTMQDMSTSIRGFLATQAVFEGMGVGKAGSSSLAATSNWMIRKG
AGKIGGLVFTGLFSKSLGANIKGWRLLADVALDLSLTLEMFAACFPKRLL
SLICVASVLKAISGVAGGATDAAIVEHFSIHNNIADVTAKGSAQHTVSSL
VGMGIAFGFLKVINVSPVVKWATFILLTVEHVLCNLECMRTLALRSLNPA
RLRVLASNYVDRLGHLPSSRGQLQAGLVGLPALSLQSTARREDLVTIPWR
GWLRRARLLPWGDSLEINLGVRCKSLVEDVDDLLWITDLYRSESIMVGVD
VDYRPLGPKFNTVILAALRRDAGREEQVFVYLLAHLVRRHLLQQSDEIPQ
GDAVLRKLYLRHVMEVNLRRAKSEWKEFRKALVAEGWDLQRVSLSPLPHR
GSWGGVLKPRESEDQQYDQYDHARSGV*
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mRNA from alignment at C-australica_Contig_1004:198..3098+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_C-australica_Contig_1004.1.3 ID=mRNA_C-australica_Contig_1004.1.3|Name=mRNA_C-australica_Contig_1004.1.3|organism=Chrysoparadoxa australica CS_1217|type=mRNA|length=2901bp|location=Sequence derived from alignment at C-australica_Contig_1004:198..3098+ (Chrysoparadoxa australica CS_1217)
CTCTCTTCCTCCCTCATGCTGCAGGGCTGGGCAAGGCGAGGTTGAGATGA GGTCAGGTGCCTATGCCGCAGCCCTCCATAGCCTCCTCTTGGGAACTTTG GGCCCCAGTGCCCCCCCACTCTTTGCATGCCTACGCTTGCGAGGAGGGGA ACAGGAGAGCGAGGGACTTAGTGGGGGAGAGACCTTCACCTGCGAGCATA TAGAGGCCACAGGCGTGGAGCAGGATACTGCATTCTCAGCTGGCGGTGAT GCGGCAACAGTCATGCTAAGACATCAGGGCGTTGTGCTGGTGGAAGAGGA GTGCCTTACTCCAGGTTCAAAGCAGGTGGGCACAGCCTGCCTAGCTTCAA ACTTGTGCAGCTCACTCACTCAACTGAGCCAACTGACCATGTCCCCTGTC GCTGCAGGGCAAGGTGGCCTACGCTATCACCAGTGATGGTTGCCTGCAGG TGGGAAGCCTGGATCACAAGGAAGGAGTAGAAGATAGAGTGCGCGCGGCC AGGATGCTTGTGCATCTACTAAACACGATGTTTAAACACCCCAAGATGAT TGCAAAGGTGAGGTTAACCTCTGCCTGGGAGCATTCTGAGAGTGGAGTCA CGCGGGGGTTTGAGTGTCAGTGTCAACTCCCTCATGCCACAGATAGGCAG CAATGATGCTGCAAGGGAGCTATGCCACCTGGTAGCAGAGGACGCAGCGT CACTTGTGAAGCAGTGCAGAGCTGGGCTACTGAGCGGTGGCACCACCTTG CGAGCTCTCTTCAAGAGGACTCTCCTACCCATCGGCTTCCCTCACACGGT CCCGCCCGAGTACCTCAGGTGAGTGCCTATGGCTCAGCCAGTGCAGTACC TCATGGATTGCTGCCGCCGCCAGCTGTCTTTGTCTTGTAAGAGTATTTGT TGAAGAGGCGTGAACTGTCTTTCCTCACCTGCCGCAGGTTCTTGGTGTGG TACACCATGCAGGACATGAGCACATCCATCCGAGGCTTCCTTGCCACGCA AGCGGTGTTTGAGGGCATGGGGGTGGGAAAGGCTGGATCGTCCAGCCTTG CGGCCACTTCGAATTGGATGATTCGGAAAGGGGCAGGAAAGATAGGAGGG CTGGTCTTCACAGGTCACTTCACTCATAACATCCATTGACCTCCTTGGCT CCTCGCTTGCTGACTGGCTCACATGCTGTTGCTCTCCATCCCAAAGGTTT GTTCAGCAAAAGCCTTGGAGCAAATATCAAGGGCTGGAGGCTGCTTGCTG ATGTCGCCCTTGACTTGAGCCTCACGTTGGAGATGTTTGCCGCCTGCTTC CCCAAACGCCTGCTCTCACTCATATGCGTTGCATCAGTGCTGAAAGCCAT CAGCGGAGTGGCTGGAGGTGCCACTGATGCTGCCATAGTGGAGCACTTCT CCATCCACAACAACATTGCCGATGTCACTGCCAAAGGCTCTGCGCAGCAC ACGGTGTCTTCACTTGTTGGGATGGGGATTGCGTTTGGTTTTCTCAAGGT CAGACTGGTGTTTGGCGTGTCATGGACCTGCCAGGCTGAGACTGCCTGGG TGCTTCGTTGTGTATAATGACCCAAGCCCTCCCATGCTGCAACTCTCTTG ATAACTGCAGGTCATCAATGTATCACCAGTGGTCAAGTGGGCCACTTTCA TCCTGCTGACAGTGGAGCATGTGCTCTGCAATCTCGAGTGCATGCGCACT CTGGCACTCAGATCCCTGAACCCAGCAAGGTTGACATGACTACTGCACGT GACATCACTCATTCACGTAGGAGTGGTTACTCCAACGCTCTCTCCTCTCT CAGTGCTCTAGTCCTAAGTGCTCCAGTAACCAGGTTGAGGGTGCTTGCCA GCAACTATGTGGACAGGCTAGGTCACCTTCCGTCCAGCAGGGGACAGCTG CAGGCAGGCCTCGTGGGATTGCCGGTACAGAGCTCCAACGCAGCCCAGAT GAACTGTTGCCACCCTTGCACCTGTTGAATACACCGCCACGGGAACAGAC CACTTATCGTTCGTGCTCCTCAGCAGGCTCTGTCACTGCAAAGCACAGCA CGCAGAGAAGACCTGGTTACCATCCCGTGGAGGGGCTGGCTGCGAAGGTA AGGCGTCTCTCACTGTCACGTCACTGCTCTCCTTCACCACAATTAACACC ACACCATATCACATTCATGCTCTCACTCAGGGCAAGACTGCTCCCGTGGG GAGACAGCCTAGAAATCAACCTAGGCGTCCGCTGCAAGTCCCTAGTGGAG GACGTGGATGACCTGCTGTGGATCACCGACCTCTACCGCTCAGAGAGCAT CATGGTGGGAGTTGATGTAGACTATCGGCCTCTCGGCCCCAAGTTCAACA CTGTTATATTGGCTGCTCTGCGCCGGGATGCAGGGAGGGAGGAGCAAGTC TTCGTCTACTTGCTGGCACACTTGGTGCGGCGCCACCTCTTGCAGCAGTC AGACGAGATACCACAAGGAGACGCAGTGCTGCGGAAACTATACCTCAGGT AAGTTGATCGGTGGCTCGTTAAAAGCCCTGGCCTTGAGTGAGCCTGATTG AACCCCGGCCTTACTGCTCAATGCGTAAGGCCTTAATCTCACACCCTTCT TCTCATGACATTTGGCAACACGCCCTCTCCCCAAAGGCACGTGATGGAGG TCAACCTCCGACGAGCCAAGAGCGAGTGGAAGGAGTTCAGGAAGGCTCTG GTGGCTGAGGGTTGGGACCTTCAGCGAGTGAGCTTGAGCCCTCTTCCTCA CAGGGGGTCATGGGGTGGGGTGCTGAAGCCACGGGAGAGTGAGGACCAGC AATATGATCAATATGATCATGCCAGATCGGGAGTTTAGTGAAGGAGGAGG ATTGGATGAGTTGAGCTCTTACGCAGGGTAATTGGAGATTCTTCTTCTTC T
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Coding sequence (CDS) from alignment at C-australica_Contig_1004:198..3098+

>mRNA_C-australica_Contig_1004.1.3 ID=mRNA_C-australica_Contig_1004.1.3|Name=mRNA_C-australica_Contig_1004.1.3|organism=Chrysoparadoxa australica CS_1217|type=CDS|length=1884bp|location=Sequence derived from alignment at C-australica_Contig_1004:198..3098+ (Chrysoparadoxa australica CS_1217)
ATGAGGTCAGGTGCCTATGCCGCAGCCCTCCATAGCCTCCTCTTGGGAAC
TTTGGGCCCCAGTGCCCCCCCACTCTTTGCATGCCTACGCTTGCGAGGAG
GGGAACAGGAGAGCGAGGGACTTAGTGGGGGAGAGACCTTCACCTGCGAG
CATATAGAGGCCACAGGCGTGGAGCAGGATACTGCATTCTCAGCTGGCGG
TGATGCGGCAACAGTCATGCTAAGACATCAGGGCGTTGTGCTGGTGGAAG
AGGAGTGCCTTACTCCAGGTTCAAAGCAGGGCAAGGTGGCCTACGCTATC
ACCAGTGATGGTTGCCTGCAGGTGGGAAGCCTGGATCACAAGGAAGGAGT
AGAAGATAGAGTGCGCGCGGCCAGGATGCTTGTGCATCTACTAAACACGA
TGTTTAAACACCCCAAGATGATTGCAAAGATAGGCAGCAATGATGCTGCA
AGGGAGCTATGCCACCTGGTAGCAGAGGACGCAGCGTCACTTGTGAAGCA
GTGCAGAGCTGGGCTACTGAGCGGTGGCACCACCTTGCGAGCTCTCTTCA
AGAGGACTCTCCTACCCATCGGCTTCCCTCACACGGTCCCGCCCGAGTAC
CTCAGGTTCTTGGTGTGGTACACCATGCAGGACATGAGCACATCCATCCG
AGGCTTCCTTGCCACGCAAGCGGTGTTTGAGGGCATGGGGGTGGGAAAGG
CTGGATCGTCCAGCCTTGCGGCCACTTCGAATTGGATGATTCGGAAAGGG
GCAGGAAAGATAGGAGGGCTGGTCTTCACAGGTTTGTTCAGCAAAAGCCT
TGGAGCAAATATCAAGGGCTGGAGGCTGCTTGCTGATGTCGCCCTTGACT
TGAGCCTCACGTTGGAGATGTTTGCCGCCTGCTTCCCCAAACGCCTGCTC
TCACTCATATGCGTTGCATCAGTGCTGAAAGCCATCAGCGGAGTGGCTGG
AGGTGCCACTGATGCTGCCATAGTGGAGCACTTCTCCATCCACAACAACA
TTGCCGATGTCACTGCCAAAGGCTCTGCGCAGCACACGGTGTCTTCACTT
GTTGGGATGGGGATTGCGTTTGGTTTTCTCAAGGTCATCAATGTATCACC
AGTGGTCAAGTGGGCCACTTTCATCCTGCTGACAGTGGAGCATGTGCTCT
GCAATCTCGAGTGCATGCGCACTCTGGCACTCAGATCCCTGAACCCAGCA
AGGTTGAGGGTGCTTGCCAGCAACTATGTGGACAGGCTAGGTCACCTTCC
GTCCAGCAGGGGACAGCTGCAGGCAGGCCTCGTGGGATTGCCGGCTCTGT
CACTGCAAAGCACAGCACGCAGAGAAGACCTGGTTACCATCCCGTGGAGG
GGCTGGCTGCGAAGGGCAAGACTGCTCCCGTGGGGAGACAGCCTAGAAAT
CAACCTAGGCGTCCGCTGCAAGTCCCTAGTGGAGGACGTGGATGACCTGC
TGTGGATCACCGACCTCTACCGCTCAGAGAGCATCATGGTGGGAGTTGAT
GTAGACTATCGGCCTCTCGGCCCCAAGTTCAACACTGTTATATTGGCTGC
TCTGCGCCGGGATGCAGGGAGGGAGGAGCAAGTCTTCGTCTACTTGCTGG
CACACTTGGTGCGGCGCCACCTCTTGCAGCAGTCAGACGAGATACCACAA
GGAGACGCAGTGCTGCGGAAACTATACCTCAGGCACGTGATGGAGGTCAA
CCTCCGACGAGCCAAGAGCGAGTGGAAGGAGTTCAGGAAGGCTCTGGTGG
CTGAGGGTTGGGACCTTCAGCGAGTGAGCTTGAGCCCTCTTCCTCACAGG
GGGTCATGGGGTGGGGTGCTGAAGCCACGGGAGAGTGAGGACCAGCAATA
TGATCAATATGATCATGCCAGATCGGGAGTTTAG
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